BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00024651
         (256 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ACE80806.1 pentatricopeptide repeat protein, partial [Picea abies]    112   4e-30
AEU08445.1 pentatricopeptide repeat protein, partial [Takakia le...   110   2e-29
AEU08437.1 pentatricopeptide repeat protein, partial [Takakia le...   109   1e-28
AEU08453.1 pentatricopeptide repeat protein, partial [Takakia le...   108   1e-28
AEU08463.1 pentatricopeptide repeat protein, partial [Pogonatum ...   108   2e-28
AEX10959.1 hypothetical protein 0_10719_01, partial [Pinus taeda...   107   4e-28
ACE80869.1 pentatricopeptide repeat protein, partial [Thyrsopter...   107   8e-28
ACE80867.1 pentatricopeptide repeat protein, partial [Lygodium j...   107   8e-28
XP_002967546.1 hypothetical protein SELMODRAFT_88678 [Selaginell...   110   1e-27
AEU08456.1 pentatricopeptide repeat protein, partial [Takakia le...   106   1e-27
ACE80803.1 pentatricopeptide repeat protein, partial [Cycas revo...   106   2e-27
ACE80789.1 pentatricopeptide repeat protein, partial [Asplenium ...   106   2e-27
AEU08459.1 pentatricopeptide repeat protein, partial [Takakia le...   106   2e-27
AEU08446.1 pentatricopeptide repeat protein, partial [Takakia le...   105   2e-27
AEU08457.1 pentatricopeptide repeat protein, partial [Takakia le...   105   3e-27
AEU08426.1 pentatricopeptide repeat protein, partial [Timmia meg...   105   3e-27
ACE80792.1 pentatricopeptide repeat protein, partial [Pilularia ...   105   4e-27
AEU08462.1 pentatricopeptide repeat protein, partial [Takakia le...   105   4e-27
XP_001764438.1 predicted protein [Physcomitrella patens] BAD6715...   112   6e-27
ACE80866.1 pentatricopeptide repeat protein, partial [Cyathea sm...   104   6e-27

>ACE80806.1 pentatricopeptide repeat protein, partial [Picea abies]
          Length = 152

 Score =  112 bits (281), Expect = 4e-30
 Identities = 53/82 (64%), Positives = 65/82 (79%)
 Frame = -3

Query: 254 DIYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPI 75
           DIYAEL RL+ +M+ AGY P  + V+ DV+ E KE+++ HHSEKLAIAFGLI TP GT I
Sbjct: 51  DIYAELERLSRQMKTAGYVPGTRFVLHDVEEEQKEQILCHHSEKLAIAFGLINTPPGTTI 110

Query: 74  RVIKNLRICWDCHNAIKSISKV 9
           R+IKNLR+C DCH+A K ISKV
Sbjct: 111 RIIKNLRVCGDCHSATKFISKV 132


>AEU08445.1 pentatricopeptide repeat protein, partial [Takakia lepidozioides]
          Length = 152

 Score =  110 bits (276), Expect = 2e-29
 Identities = 52/82 (63%), Positives = 65/82 (79%)
 Frame = -3

Query: 254 DIYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPI 75
           +I+AEL RL  +M+ AGY PD + V+ DV++E KE  + HHSEKLAIAFGLI+TPSG PI
Sbjct: 51  EIHAELERLFRQMKEAGYQPDTRFVLHDVEDEQKELSLCHHSEKLAIAFGLISTPSGMPI 110

Query: 74  RVIKNLRICWDCHNAIKSISKV 9
           R+IKNLR+C DCH A K ISK+
Sbjct: 111 RIIKNLRVCGDCHAATKFISKI 132


>AEU08437.1 pentatricopeptide repeat protein, partial [Takakia lepidozioides]
          Length = 152

 Score =  109 bits (272), Expect = 1e-28
 Identities = 52/82 (63%), Positives = 65/82 (79%)
 Frame = -3

Query: 254 DIYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPI 75
           +I+AEL RL+ +M+ AGY PDL+ V+ DV+ E KE  + HHSEKLAIAFGLI+T  GTP+
Sbjct: 51  EIHAELKRLSGQMKEAGYVPDLRFVLHDVEEEQKEFSLYHHSEKLAIAFGLISTAPGTPL 110

Query: 74  RVIKNLRICWDCHNAIKSISKV 9
           RVIKNLR+C DCH A K ISK+
Sbjct: 111 RVIKNLRVCGDCHTATKFISKI 132


>AEU08453.1 pentatricopeptide repeat protein, partial [Takakia lepidozioides]
          Length = 152

 Score =  108 bits (271), Expect = 1e-28
 Identities = 49/82 (59%), Positives = 62/82 (75%)
 Frame = -3

Query: 254 DIYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPI 75
           +IYAEL +L   M+  GY PD + ++ DVD + KE+ + HHSEKLAI FGLI+TP GTPI
Sbjct: 51  EIYAELEKLTSHMKEEGYIPDTRFILHDVDQQTKEQALCHHSEKLAICFGLISTPPGTPI 110

Query: 74  RVIKNLRICWDCHNAIKSISKV 9
           R++KNLRIC DCH A K ISK+
Sbjct: 111 RIVKNLRICGDCHTASKFISKI 132


>AEU08463.1 pentatricopeptide repeat protein, partial [Pogonatum urnigerum]
          Length = 152

 Score =  108 bits (270), Expect = 2e-28
 Identities = 52/82 (63%), Positives = 62/82 (75%)
 Frame = -3

Query: 254 DIYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPI 75
           DIY EL RL  EM+ AGY PD ++V+ DVD + KE+ +  HSEKLAIA+GLI+TP GTPI
Sbjct: 51  DIYYELNRLTQEMKKAGYVPDTQIVLHDVDKQQKEEALCSHSEKLAIAYGLISTPPGTPI 110

Query: 74  RVIKNLRICWDCHNAIKSISKV 9
           RV KNLR+C DCH A K IS V
Sbjct: 111 RVFKNLRVCSDCHAATKFISMV 132


>AEX10959.1 hypothetical protein 0_10719_01, partial [Pinus taeda] AEX10960.1
           hypothetical protein 0_10719_01, partial [Pinus taeda]
           AEX10961.1 hypothetical protein 0_10719_01, partial
           [Pinus taeda] AEX10962.1 hypothetical protein
           0_10719_01, partial [Pinus taeda] AEX10963.1
           hypothetical protein 0_10719_01, partial [Pinus taeda]
           AEX10964.1 hypothetical protein 0_10719_01, partial
           [Pinus taeda] AEX10965.1 hypothetical protein
           0_10719_01, partial [Pinus taeda] AEX10966.1
           hypothetical protein 0_10719_01, partial [Pinus taeda]
           AEX10967.1 hypothetical protein 0_10719_01, partial
           [Pinus taeda] AEX10968.1 hypothetical protein
           0_10719_01, partial [Pinus taeda] AEX10969.1
           hypothetical protein 0_10719_01, partial [Pinus taeda]
          Length = 153

 Score =  107 bits (268), Expect = 4e-28
 Identities = 50/81 (61%), Positives = 64/81 (79%)
 Frame = -3

Query: 251 IYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPIR 72
           I+AEL RL+ +M+ AGY PD   V+ DV++E KE ++ HHSEKLA+AFGLI T  G PIR
Sbjct: 46  IFAELERLSGQMKEAGYVPDKNFVLHDVEDEQKEHVLYHHSEKLALAFGLINTSPGNPIR 105

Query: 71  VIKNLRICWDCHNAIKSISKV 9
           +IKNLR+C DCH+AIK ISK+
Sbjct: 106 IIKNLRVCGDCHSAIKFISKI 126


>ACE80869.1 pentatricopeptide repeat protein, partial [Thyrsopteris elegans]
          Length = 152

 Score =  107 bits (266), Expect = 8e-28
 Identities = 49/84 (58%), Positives = 65/84 (77%)
 Frame = -3

Query: 254 DIYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPI 75
           +IYAEL +L  +M+  GY PD  +V+ DV+ E KE L+S+HSEKLAIAFGLI+TP GTP+
Sbjct: 51  EIYAELEKLNLQMKVEGYVPDTNLVLHDVEEELKEHLLSYHSEKLAIAFGLISTPHGTPL 110

Query: 74  RVIKNLRICWDCHNAIKSISKVAQ 3
            ++KNLR+C DCH A K ISK+ +
Sbjct: 111 HIVKNLRLCSDCHTAAKFISKITE 134


>ACE80867.1 pentatricopeptide repeat protein, partial [Lygodium japonicum]
          Length = 152

 Score =  107 bits (266), Expect = 8e-28
 Identities = 52/81 (64%), Positives = 64/81 (79%)
 Frame = -3

Query: 251 IYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPIR 72
           IYAEL RL  EM+ AGY PD KVV+ DVD   KE++V +HSEKLA+AFGLI+TP  T +R
Sbjct: 52  IYAELDRLTFEMKKAGYAPDTKVVLHDVDEVAKEQMVCYHSEKLALAFGLISTPQRTSLR 111

Query: 71  VIKNLRICWDCHNAIKSISKV 9
           +IKNLR+C DCH+A K ISK+
Sbjct: 112 IIKNLRMCPDCHSAFKFISKL 132


>XP_002967546.1 hypothetical protein SELMODRAFT_88678 [Selaginella moellendorffii]
           EFJ30893.1 hypothetical protein SELMODRAFT_88678
           [Selaginella moellendorffii]
          Length = 281

 Score =  110 bits (274), Expect = 1e-27
 Identities = 51/82 (62%), Positives = 67/82 (81%)
 Frame = -3

Query: 254 DIYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPI 75
           +I+AEL RL   MR AGY PD +VV+ DV+ E+KE+++ +HSEK A+AFGLI+TPSGTP+
Sbjct: 173 EIFAELQRLGVLMREAGYVPDTEVVLMDVEEEEKEQVLCYHSEKQAMAFGLISTPSGTPL 232

Query: 74  RVIKNLRICWDCHNAIKSISKV 9
           RV+KNLR+C DCH A K ISK+
Sbjct: 233 RVVKNLRVCTDCHTATKFISKI 254


>AEU08456.1 pentatricopeptide repeat protein, partial [Takakia lepidozioides]
          Length = 152

 Score =  106 bits (265), Expect = 1e-27
 Identities = 50/83 (60%), Positives = 66/83 (79%)
 Frame = -3

Query: 254 DIYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPI 75
           +I+AEL RL+ +M+ AGY PD + V+ DV+ E K+  + HHSEKLAIAFGLI+T  G+P+
Sbjct: 51  EIHAELKRLSWQMKEAGYVPDTRFVLHDVEKEQKDISLCHHSEKLAIAFGLISTSPGSPL 110

Query: 74  RVIKNLRICWDCHNAIKSISKVA 6
           RVIKNLR+C DCH AIK ISK++
Sbjct: 111 RVIKNLRVCGDCHTAIKFISKIS 133


>ACE80803.1 pentatricopeptide repeat protein, partial [Cycas revoluta]
          Length = 152

 Score =  106 bits (264), Expect = 2e-27
 Identities = 50/83 (60%), Positives = 64/83 (77%)
 Frame = -3

Query: 251 IYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPIR 72
           IYA+L RL  EM+  GY P  + V+ DV+ E KE+ + +HSEKLAIAFGLI+TP+GTPIR
Sbjct: 52  IYAKLERLTGEMKETGYMPHTEFVLHDVEEEQKEQFLFYHSEKLAIAFGLISTPAGTPIR 111

Query: 71  VIKNLRICWDCHNAIKSISKVAQ 3
           VIKNLR+C DCH A K IS++ +
Sbjct: 112 VIKNLRVCGDCHIATKFISRIVE 134


>ACE80789.1 pentatricopeptide repeat protein, partial [Asplenium nidus]
          Length = 152

 Score =  106 bits (264), Expect = 2e-27
 Identities = 49/82 (59%), Positives = 65/82 (79%)
 Frame = -3

Query: 254 DIYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPI 75
           +IY+EL +L  EM+A GY P+  +V+ DV+ E KE+L+ +HSEKLA+AFGLI+TP GTP+
Sbjct: 51  EIYSELEKLNLEMKAEGYVPETNLVLHDVEEEMKERLLCYHSEKLAMAFGLISTPQGTPL 110

Query: 74  RVIKNLRICWDCHNAIKSISKV 9
            V+KNLRIC DCH A K ISK+
Sbjct: 111 HVVKNLRICADCHTAAKYISKI 132


>AEU08459.1 pentatricopeptide repeat protein, partial [Takakia lepidozioides]
          Length = 152

 Score =  106 bits (264), Expect = 2e-27
 Identities = 50/82 (60%), Positives = 64/82 (78%)
 Frame = -3

Query: 254 DIYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPI 75
           +I+AEL RL+ +M+ AGY PD + V+ DV+ E KE  + HHSEKLAI+FGLI+T  GTP+
Sbjct: 51  EIHAELRRLSGQMKEAGYVPDTRFVLRDVEEEQKEFSLCHHSEKLAISFGLISTAPGTPL 110

Query: 74  RVIKNLRICWDCHNAIKSISKV 9
           RVIKNLR+C DCH A K ISK+
Sbjct: 111 RVIKNLRVCGDCHTATKFISKI 132


>AEU08446.1 pentatricopeptide repeat protein, partial [Takakia lepidozioides]
          Length = 152

 Score =  105 bits (263), Expect = 2e-27
 Identities = 51/83 (61%), Positives = 62/83 (74%)
 Frame = -3

Query: 251 IYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPIR 72
           I+ EL RL   M  AGY PD + V+ DV+ E KE  + HHSEKLAIAFGLI+TP GTPIR
Sbjct: 52  IHDELRRLQGLMEEAGYVPDTRFVLHDVEGEQKEFSLCHHSEKLAIAFGLISTPPGTPIR 111

Query: 71  VIKNLRICWDCHNAIKSISKVAQ 3
           +IKNLR+C DCH AIK IS++ +
Sbjct: 112 IIKNLRVCGDCHTAIKFISRIVR 134


>AEU08457.1 pentatricopeptide repeat protein, partial [Takakia lepidozioides]
          Length = 152

 Score =  105 bits (262), Expect = 3e-27
 Identities = 50/83 (60%), Positives = 64/83 (77%)
 Frame = -3

Query: 254 DIYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPI 75
           +I+AEL RL+  M+ AGY PD + V+ DV+ E KE  + HHSE+LAIAFGLI+ P+  PI
Sbjct: 51  EIHAELKRLSRRMKDAGYVPDTQFVLHDVEEERKELSLCHHSERLAIAFGLISMPTAMPI 110

Query: 74  RVIKNLRICWDCHNAIKSISKVA 6
           R+IKNLR+C DCH AIK ISK+A
Sbjct: 111 RIIKNLRVCGDCHTAIKFISKIA 133


>AEU08426.1 pentatricopeptide repeat protein, partial [Timmia megapolitana
           subsp. bavarica]
          Length = 152

 Score =  105 bits (262), Expect = 3e-27
 Identities = 50/84 (59%), Positives = 63/84 (75%)
 Frame = -3

Query: 254 DIYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPI 75
           +IYAEL RL+  ++A GY PD ++V+ ++D EDKE  +  HSEKLAIAFGL+ TP G PI
Sbjct: 51  EIYAELNRLSERIKAEGYIPDTRLVLQNMDEEDKELALCSHSEKLAIAFGLMRTPPGKPI 110

Query: 74  RVIKNLRICWDCHNAIKSISKVAQ 3
           RV KNLR+C DCH A K ISKV +
Sbjct: 111 RVYKNLRVCSDCHTATKFISKVTR 134


>ACE80792.1 pentatricopeptide repeat protein, partial [Pilularia globulifera]
          Length = 152

 Score =  105 bits (261), Expect = 4e-27
 Identities = 50/82 (60%), Positives = 63/82 (76%)
 Frame = -3

Query: 254 DIYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPI 75
           +IYAE+ RL  EM+A GY PD  +V+ DV+ E KE L+ +HSEKLAIAFGLI+TP G P+
Sbjct: 51  EIYAEVERLNLEMKAEGYVPDTNLVLHDVEEELKEHLLKYHSEKLAIAFGLISTPPGAPL 110

Query: 74  RVIKNLRICWDCHNAIKSISKV 9
            V+KNLR+C DCH A K ISK+
Sbjct: 111 HVVKNLRLCSDCHTAAKFISKL 132


>AEU08462.1 pentatricopeptide repeat protein, partial [Takakia lepidozioides]
          Length = 152

 Score =  105 bits (261), Expect = 4e-27
 Identities = 48/82 (58%), Positives = 63/82 (76%)
 Frame = -3

Query: 254 DIYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPI 75
           +I+ EL RLA  M+  GY PD + V+ DV+ E KE  + +HSEKLA+AFGLI+TP+GTP+
Sbjct: 51  EIHGELRRLAERMKETGYVPDTRFVLHDVEEEQKEFSLCYHSEKLAMAFGLISTPAGTPM 110

Query: 74  RVIKNLRICWDCHNAIKSISKV 9
           R+IKNLR+C DCH A K ISK+
Sbjct: 111 RIIKNLRVCGDCHTATKFISKI 132


>XP_001764438.1 predicted protein [Physcomitrella patens] BAD67154.1 PpPPR_91
            [Physcomitrella patens] EDQ70705.1 predicted protein
            [Physcomitrella patens]
          Length = 868

 Score =  112 bits (279), Expect = 6e-27
 Identities = 51/81 (62%), Positives = 64/81 (79%)
 Frame = -3

Query: 251  IYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPIR 72
            I+AEL  L  EM+ AGY PD++ V+ DVD+  KEK + HHSEKLAIA+GL+ TPSGTPIR
Sbjct: 761  IHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIR 820

Query: 71   VIKNLRICWDCHNAIKSISKV 9
            ++KNLR+C DCH A K ISK+
Sbjct: 821  IMKNLRVCGDCHTATKFISKI 841


>ACE80866.1 pentatricopeptide repeat protein, partial [Cyathea smithii]
          Length = 152

 Score =  104 bits (260), Expect = 6e-27
 Identities = 48/82 (58%), Positives = 64/82 (78%)
 Frame = -3

Query: 254 DIYAELTRLAPEMRAAGYDPDLKVVMDDVDNEDKEKLVSHHSEKLAIAFGLITTPSGTPI 75
           +IYAEL +L  +M+A GY PD  +V+ DV+ E KE L+ +HSEKLA+AFGLI+TP GTP+
Sbjct: 51  EIYAELEKLKLQMKAEGYVPDTSLVLHDVEEELKEHLLIYHSEKLAMAFGLISTPHGTPL 110

Query: 74  RVIKNLRICWDCHNAIKSISKV 9
            ++KNLR+C DCH A K ISK+
Sbjct: 111 HIVKNLRLCSDCHTAAKFISKI 132