BLASTX nr result

ID: Ephedra29_contig00024604 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00024604
         (573 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABK26686.1 unknown [Picea sitchensis]                                  65   3e-09

>ABK26686.1 unknown [Picea sitchensis]
          Length = 309

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
 Frame = -3

Query: 541 YVSRDVININGDLCFDIYVREEALVSVTLEKSIEMAVEDMRITAK--WNVECTSRVRYPY 368
           YVS DV    G +CFD+ VREE L+  TLE+   +  +D+    +  W V+    +   Y
Sbjct: 91  YVSTDVTRTTGKVCFDVCVREETLICGTLERKGSVKYDDVTQLRQPSWTVDFCCAL--DY 148

Query: 367 PSIW-----NWKTHPVVEVSISGQVEGEGANKSHFRADDSVKMQNIVKLIPRRRRVGQR- 206
           PS W     N    P +E+ I+G+               ++ +    +LIPRR+RV    
Sbjct: 149 PSKWSSTKPNINKFPSLELYIAGRA-----------GSSAMVLTGTEQLIPRRKRVRHGV 197

Query: 205 TLDAIPEGNEEDSDLF 158
           TLD IPEGN+ ++ +F
Sbjct: 198 TLDVIPEGNDYENSIF 213


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