BLASTX nr result

ID: Ephedra29_contig00024569 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00024569
         (631 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OAE28656.1 hypothetical protein AXG93_1335s1480 [Marchantia poly...    72   9e-12
ABK26870.1 unknown [Picea sitchensis]                                  67   5e-11
ABK22229.1 unknown [Picea sitchensis]                                  67   5e-11
ABK23078.1 unknown [Picea sitchensis] ABK23394.1 unknown [Picea ...    66   1e-10
ACG34518.1 60S acidic ribosomal protein P1 [Zea mays]                  63   1e-09
ACG30985.1 60S acidic ribosomal protein P1 [Zea mays] ACG34480.1...    63   1e-09
NP_001281200.2 uncharacterized protein LOC100282819 [Zea mays] X...    63   1e-09
XP_004973011.1 PREDICTED: 60S acidic ribosomal protein P1 [Setar...    63   1e-09
XP_007218633.1 hypothetical protein PRUPE_ppa013661mg [Prunus pe...    63   1e-09
KQL01045.1 hypothetical protein SETIT_015044mg, partial [Setaria...    63   2e-09
ACG30896.1 60S acidic ribosomal protein P1 [Zea mays] ACG31064.1...    63   2e-09
XP_015650060.1 PREDICTED: 60S acidic ribosomal protein P1 [Oryza...    63   2e-09
XP_010035314.1 PREDICTED: 60S acidic ribosomal protein P1 [Eucal...    62   3e-09
NP_001105701.1 60S acidic ribosomal protein P1 [Zea mays] XP_008...    62   4e-09
P52855.1 RecName: Full=60S acidic ribosomal protein P1; AltName:...    62   4e-09
ACG31604.1 60S acidic ribosomal protein P1 [Zea mays]                  62   4e-09
ACG30779.1 60S acidic ribosomal protein P1 [Zea mays]                  62   4e-09
XP_002443766.1 hypothetical protein SORBIDRAFT_07g001570 [Sorghu...    62   4e-09
XP_002991249.1 hypothetical protein SELMODRAFT_133189, partial [...    62   5e-09
XP_009366604.1 PREDICTED: 60S acidic ribosomal protein P1-like [...    62   5e-09

>OAE28656.1 hypothetical protein AXG93_1335s1480 [Marchantia polymorpha subsp.
           polymorpha]
          Length = 222

 Score = 71.6 bits (174), Expect = 9e-12
 Identities = 36/52 (69%), Positives = 40/52 (76%)
 Frame = -3

Query: 422 SLLVLRTTFQGEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           SL  L +  QG+KI TLVKAAN+TVE YWPGL AKLLEKRS E LI + GSG
Sbjct: 125 SLFSLGSRLQGDKIATLVKAANITVESYWPGLFAKLLEKRSVEDLITNVGSG 176


>ABK26870.1 unknown [Picea sitchensis]
          Length = 114

 Score = 67.0 bits (162), Expect = 5e-11
 Identities = 33/42 (78%), Positives = 35/42 (83%)
 Frame = -3

Query: 392 GEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           GEKI TLVKAANV +E YWPGL AKLLEKR+ E LILS GSG
Sbjct: 24  GEKISTLVKAANVQIESYWPGLFAKLLEKRNIEDLILSVGSG 65


>ABK22229.1 unknown [Picea sitchensis]
          Length = 114

 Score = 67.0 bits (162), Expect = 5e-11
 Identities = 33/42 (78%), Positives = 35/42 (83%)
 Frame = -3

Query: 392 GEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           GEKI TLVKAANV +E YWPGL AKLLEKR+ E LILS GSG
Sbjct: 24  GEKISTLVKAANVQIESYWPGLFAKLLEKRNIEDLILSVGSG 65


>ABK23078.1 unknown [Picea sitchensis] ABK23394.1 unknown [Picea sitchensis]
           ACN40947.1 unknown [Picea sitchensis]
          Length = 112

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 32/42 (76%), Positives = 35/42 (83%)
 Frame = -3

Query: 392 GEKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           GEKI TLVKAANV +E YWPGL AKLLEKR+ E L+LS GSG
Sbjct: 24  GEKINTLVKAANVKIESYWPGLFAKLLEKRNIEDLLLSVGSG 65


>ACG34518.1 60S acidic ribosomal protein P1 [Zea mays]
          Length = 102

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = -3

Query: 389 EKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           EKI T+VKAAN+ VE YWP L AKLLEKRS E LILS GSG
Sbjct: 25  EKIATIVKAANIKVESYWPALFAKLLEKRSVEDLILSVGSG 65


>ACG30985.1 60S acidic ribosomal protein P1 [Zea mays] ACG34480.1 60S acidic
           ribosomal protein P1 [Zea mays]
          Length = 109

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = -3

Query: 389 EKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           EKI T+VKAAN+ VE YWP L AKLLEKRS E LILS GSG
Sbjct: 25  EKIATIVKAANIKVESYWPALFAKLLEKRSVEDLILSVGSG 65


>NP_001281200.2 uncharacterized protein LOC100282819 [Zea mays] XP_008677271.1
           PREDICTED: LOC100282819 isoform X1 [Zea mays] ACF85707.1
           unknown [Zea mays] ACF88186.1 unknown [Zea mays]
           ACG24477.1 60S acidic ribosomal protein P1 [Zea mays]
           ACG24892.1 60S acidic ribosomal protein P1 [Zea mays]
           AQK51042.1 60S acidic ribosomal protein P1-3 [Zea mays]
           AQK51043.1 60S acidic ribosomal protein P1-3 [Zea mays]
          Length = 109

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = -3

Query: 389 EKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           EKI T+VKAAN+ VE YWP L AKLLEKRS E LILS GSG
Sbjct: 25  EKIATIVKAANIKVESYWPALFAKLLEKRSVEDLILSVGSG 65


>XP_004973011.1 PREDICTED: 60S acidic ribosomal protein P1 [Setaria italica]
          Length = 109

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = -3

Query: 389 EKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           EKI T+VKAAN+ VE YWP L AKLLEKRS E LILS GSG
Sbjct: 25  EKIATIVKAANIKVESYWPALFAKLLEKRSVEDLILSVGSG 65


>XP_007218633.1 hypothetical protein PRUPE_ppa013661mg [Prunus persica]
           XP_008229222.1 PREDICTED: 60S acidic ribosomal protein
           P1-like [Prunus mume] XP_008233051.1 PREDICTED: 60S
           acidic ribosomal protein P1 [Prunus mume] ONI23593.1
           hypothetical protein PRUPE_2G197300 [Prunus persica]
          Length = 110

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = -3

Query: 389 EKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           EKI TLVKAANVTVE YWPGL AKL EKR+ E LIL+ G+G
Sbjct: 25  EKIATLVKAANVTVESYWPGLFAKLAEKRNIEDLILNVGAG 65


>KQL01045.1 hypothetical protein SETIT_015044mg, partial [Setaria italica]
          Length = 122

 Score = 63.2 bits (152), Expect = 2e-09
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = -3

Query: 389 EKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           EKI T+VKAAN+ VE YWP L AKLLEKRS E LILS GSG
Sbjct: 38  EKIATIVKAANIKVESYWPALFAKLLEKRSVEDLILSVGSG 78


>ACG30896.1 60S acidic ribosomal protein P1 [Zea mays] ACG31064.1 60S acidic
           ribosomal protein P1 [Zea mays]
          Length = 109

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = -3

Query: 389 EKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           EKI T+VKAAN+ VE YWP L AKLLEKR+ E LILS GSG
Sbjct: 25  EKIATIVKAANIKVESYWPALFAKLLEKRNVEGLILSVGSG 65


>XP_015650060.1 PREDICTED: 60S acidic ribosomal protein P1 [Oryza sativa Japonica
           Group] BAD33092.1 putative acidic ribosomal protein P1a
           [Oryza sativa Japonica Group] BAF22768.1 Os08g0116500
           [Oryza sativa Japonica Group] EAZ05394.1 hypothetical
           protein OsI_27602 [Oryza sativa Indica Group] EAZ41313.1
           hypothetical protein OsJ_25823 [Oryza sativa Japonica
           Group] BAG86638.1 unnamed protein product [Oryza sativa
           Japonica Group] BAT03554.1 Os08g0116500 [Oryza sativa
           Japonica Group]
          Length = 110

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = -3

Query: 389 EKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           EKI TLVKAAN+ VE YWPGL AKLLE RS + LILS GSG
Sbjct: 25  EKIATLVKAANIKVEAYWPGLFAKLLEHRSVDDLILSVGSG 65


>XP_010035314.1 PREDICTED: 60S acidic ribosomal protein P1 [Eucalyptus grandis]
           KCW46619.1 hypothetical protein EUGRSUZ_K00427
           [Eucalyptus grandis]
          Length = 110

 Score = 62.4 bits (150), Expect = 3e-09
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = -3

Query: 389 EKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           EKI TLVKAANV+VE YWPGL AKL EKR+ E LI++ GSG
Sbjct: 25  EKIATLVKAANVSVESYWPGLFAKLAEKRNVEDLIMNVGSG 65


>NP_001105701.1 60S acidic ribosomal protein P1 [Zea mays] XP_008648318.1
           PREDICTED: 60S acidic ribosomal protein P1 isoform X1
           [Zea mays] AAB71079.1 acidic ribosomal protein P1a [Zea
           mays] ACG31544.1 60S acidic ribosomal protein P1 [Zea
           mays] ACR38189.1 unknown [Zea mays] AQK78305.1 60S
           acidic ribosomal protein P1 [Zea mays] AQK78306.1 60S
           acidic ribosomal protein P1 [Zea mays]
          Length = 109

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = -3

Query: 389 EKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           EKI T+VKAAN+ VE YWP L AKLLEKR+ E LILS GSG
Sbjct: 25  EKIATIVKAANIKVESYWPALFAKLLEKRNVEDLILSVGSG 65


>P52855.1 RecName: Full=60S acidic ribosomal protein P1; AltName: Full=L12
           AAA91168.1 ribosomal protein L12 [Zea mays]
          Length = 109

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = -3

Query: 389 EKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           EKI T+VKAAN+ VE YWP L AKLLEKR+ E LILS GSG
Sbjct: 25  EKIATIVKAANIKVESYWPALFAKLLEKRNVEDLILSVGSG 65


>ACG31604.1 60S acidic ribosomal protein P1 [Zea mays]
          Length = 109

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = -3

Query: 389 EKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           EKI T+VKAAN+ VE YWP L AKLLEKR+ E LILS GSG
Sbjct: 25  EKIATIVKAANIKVESYWPALFAKLLEKRNVEDLILSVGSG 65


>ACG30779.1 60S acidic ribosomal protein P1 [Zea mays]
          Length = 109

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = -3

Query: 389 EKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           EKI T+VKAAN+ VE YWP L AKLLEKR+ E LILS GSG
Sbjct: 25  EKIATIVKAANIKVESYWPALFAKLLEKRNVEDLILSVGSG 65


>XP_002443766.1 hypothetical protein SORBIDRAFT_07g001570 [Sorghum bicolor]
           EES13261.1 hypothetical protein SORBI_007G018300
           [Sorghum bicolor] AJP00056.1 60S acidic ribosomal
           protein P1 [Saccharum hybrid cultivar]
          Length = 109

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = -3

Query: 389 EKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           EKI T+VKAAN+ VE YWP L AKLLEKR+ E LILS GSG
Sbjct: 25  EKIATIVKAANIKVESYWPALFAKLLEKRNVEDLILSVGSG 65


>XP_002991249.1 hypothetical protein SELMODRAFT_133189, partial [Selaginella
           moellendorffii] EFJ07677.1 hypothetical protein
           SELMODRAFT_133189, partial [Selaginella moellendorffii]
          Length = 110

 Score = 61.6 bits (148), Expect = 5e-09
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = -3

Query: 389 EKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           EKI TLVKAANV V+ YWP L AKLLEKRS + LILS GSG
Sbjct: 24  EKIATLVKAANVKVDSYWPSLFAKLLEKRSVDDLILSCGSG 64


>XP_009366604.1 PREDICTED: 60S acidic ribosomal protein P1-like [Pyrus x
           bretschneideri]
          Length = 111

 Score = 61.6 bits (148), Expect = 5e-09
 Identities = 29/41 (70%), Positives = 34/41 (82%)
 Frame = -3

Query: 389 EKIMTLVKAANVTVEPYWPGLIAKLLEKRSAEALILSYGSG 267
           EKI T+VKAAN+TVE YWPGL AKL EKR+ E LIL+ G+G
Sbjct: 25  EKIATVVKAANITVESYWPGLFAKLAEKRNIEDLILNVGAG 65


Top