BLASTX nr result

ID: Ephedra29_contig00024426 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00024426
         (369 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OAE20539.1 hypothetical protein AXG93_948s1470 [Marchantia polym...    57   5e-07
XP_001766419.1 ATP-binding cassette transporter, subfamily D, me...    55   3e-06

>OAE20539.1 hypothetical protein AXG93_948s1470 [Marchantia polymorpha subsp.
           polymorpha]
          Length = 649

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 24/49 (48%), Positives = 36/49 (73%)
 Frame = -1

Query: 147 TWDTAKKVWTLSSLYFKSDQKRKAFFLVSSVIILCAITSGMYVILSYIQ 1
           +W   KK+W +  +YFK D+++KA  L++ V+ LCAI +GM+VI SYIQ
Sbjct: 26  SWVLVKKMWRVGIMYFKGDKRKKACTLLAVVLTLCAICAGMFVIFSYIQ 74


>XP_001766419.1 ATP-binding cassette transporter, subfamily D, member 4, group PMP
           protein PpABCD4 [Physcomitrella patens] EDQ68747.1
           ATP-binding cassette transporter, subfamily D, member 4,
           group PMP protein PpABCD4 [Physcomitrella patens]
          Length = 599

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 21/51 (41%), Positives = 38/51 (74%)
 Frame = -1

Query: 153 QSTWDTAKKVWTLSSLYFKSDQKRKAFFLVSSVIILCAITSGMYVILSYIQ 1
           + ++   +K+W +S +YF  D+K KA FL+  V+ILCA+ +G++V++SY+Q
Sbjct: 14  EPSFSLMRKLWRISRMYFYGDRKSKARFLLVIVLILCAVCAGLFVVMSYVQ 64


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