BLASTX nr result

ID: Ephedra29_contig00024402 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00024402
         (321 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OMP01217.1 hypothetical protein COLO4_12055 [Corchorus olitorius]      55   2e-06
XP_010267488.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [N...    54   4e-06
OMO95727.1 hypothetical protein CCACVL1_05290 [Corchorus capsula...    53   7e-06

>OMP01217.1 hypothetical protein COLO4_12055 [Corchorus olitorius]
          Length = 352

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
 Frame = +1

Query: 58  KPGRPRLNPAETK-LTPEGQRIDSLEEIIEEEVSMTLLMKSKDYISGKPDRSVKFEEAKY 234
           KP RP+ +   T+ +TPE  RI   E +++ + +   LMK+K+++S +P++ +  +EA  
Sbjct: 39  KPKRPKPDSPRTRPVTPESNRIPHFESLLDRDATFRFLMKTKEHLSKQPEQVLLLDEAGK 98

Query: 235 ACFSLGLTQRNSPLRIVQRHPAIFRSF 315
               LG  +     R + RHP +F ++
Sbjct: 99  LHRELGFPRGRKVARSISRHPLLFTTY 125


>XP_010267488.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Nelumbo nucifera]
          Length = 412

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
 Frame = +1

Query: 55  RKPGRPRLNPAETKLTP-EGQRIDSLEEIIEEEVSMTLLMKSKDYISGKPDRSVKFEEAK 231
           +K  R +   A TKL   E  R+   EEI++ +     L KSK+++S +P+  ++ ++A 
Sbjct: 65  KKKKRKKKESARTKLVQHESNRVQHFEEIVQRDAFFRFLTKSKEFLSKQPEHVLRLDDAG 124

Query: 232 YACFSLGLTQRNSPLRIVQRHPAIFRSF 315
                LG  +    +R ++RHP IF+++
Sbjct: 125 KLYHELGFPRGRKVVRSIERHPLIFQTY 152


>OMO95727.1 hypothetical protein CCACVL1_05290 [Corchorus capsularis]
          Length = 398

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
 Frame = +1

Query: 58  KPGRPRLNPAETK-LTPEGQRIDSLEEIIEEEVSMTLLMKSKDYISGKPDRSVKFEEAKY 234
           KP RP+ +   T+ +TPE  RI   E +++ + +   L K+K+Y+S +P++ +  ++A  
Sbjct: 41  KPKRPKPDSPRTRPVTPESNRIPHFESLLDRDATFRFLTKTKEYLSKQPEQVLLLDDAGK 100

Query: 235 ACFSLGLTQRNSPLRIVQRHPAIFRSF 315
               LG  +     R + RHP +F ++
Sbjct: 101 LHRELGFPRGRKVARSISRHPLLFTTY 127


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