BLASTX nr result
ID: Ephedra29_contig00024266
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra29_contig00024266 (371 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJP06334.1 NRPD1a [Pinus tabuliformis] 80 6e-15 AJA90781.1 DNA-directed RNA polymerase IV largest subunit [Pinus... 78 2e-14 AJA90773.1 DNA-directed RNA polymerase IV largest subunit [Ginkg... 75 2e-13 AJA90757.1 DNA-directed RNA polymerase IV largest subunit [Cycas... 70 1e-11 XP_018452283.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 61 3e-08 XP_018820498.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 60 3e-08 XP_018820497.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 60 3e-08 XP_013702317.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 57 6e-07 XP_013717294.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 57 6e-07 XP_013637356.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 57 6e-07 XP_006391790.1 hypothetical protein EUTSA_v10023214mg [Eutrema s... 56 1e-06 XP_009411452.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 56 1e-06 XP_009411449.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 56 1e-06 XP_010278508.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 55 2e-06 XP_019055894.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 55 2e-06 XP_019055893.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 55 2e-06 XP_010676559.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 55 2e-06 CDY32191.1 BnaA03g54760D [Brassica napus] 55 2e-06 ONK73338.1 uncharacterized protein A4U43_C04F29910 [Asparagus of... 55 2e-06 XP_010533721.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 55 2e-06 >AJP06334.1 NRPD1a [Pinus tabuliformis] Length = 1856 Score = 79.7 bits (195), Expect = 6e-15 Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 1/100 (1%) Frame = +3 Query: 69 KKILLRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVFDSQIYHKI-KHSKEA 245 ++++LRLS L+++HCG EYGA VK HLETV L QL+ + IY K+ K S E+ Sbjct: 1186 QRVILRLSNKLKSIHCGQEYGASKVKEHLETVRLCQLS-----ISTKIIYEKLEKGSIES 1240 Query: 246 LSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365 + S + PW HF L KE+L+E L + ++ L +EY Sbjct: 1241 MKIPMSALSPWAAHFLLCKERLKENKLTVQSVILALNKEY 1280 >AJA90781.1 DNA-directed RNA polymerase IV largest subunit [Pinus canariensis] Length = 1821 Score = 78.2 bits (191), Expect = 2e-14 Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 1/100 (1%) Frame = +3 Query: 69 KKILLRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVFDSQIYHKI-KHSKEA 245 ++++LRLS L+++HCG EYGA VK HLETV L QL+ + +Y K+ K S E+ Sbjct: 1186 QRVILRLSNKLKSIHCGQEYGASKVKEHLETVRLCQLSTSTKI-----MYEKLEKGSIES 1240 Query: 246 LSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365 + S + PW HF L KE+L+E L + ++ L +EY Sbjct: 1241 MKIPMSVLSPWAAHFLLCKERLKENKLTVQSVILALNKEY 1280 >AJA90773.1 DNA-directed RNA polymerase IV largest subunit [Ginkgo biloba] Length = 1803 Score = 75.5 bits (184), Expect = 2e-13 Identities = 45/119 (37%), Positives = 68/119 (57%), Gaps = 4/119 (3%) Frame = +3 Query: 21 HGLEEIL---GSGQGKDCCKKILLRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERY 191 H L+E+L +G+ + K + LRLS+ LR +H GLEYGA+ ++ HL+ V L LT Sbjct: 1143 HILKEVLCVRPTGRNGNVNKSVTLRLSKKLRKIHSGLEYGAIELQEHLQKVILSDLTTSV 1202 Query: 192 GVVFDSQIYHKIKHS-KEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365 + +Y K+ S EA+ S PWV H LSK++L++K L + ++ L EEY Sbjct: 1203 RI-----MYEKLGESVSEAMKIPISAFSPWVTHILLSKKRLKKKKLTVQSVIGSLYEEY 1256 >AJA90757.1 DNA-directed RNA polymerase IV largest subunit [Cycas revoluta] Length = 1785 Score = 70.5 bits (171), Expect = 1e-11 Identities = 37/105 (35%), Positives = 59/105 (56%) Frame = +3 Query: 51 QGKDCCKKILLRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVFDSQIYHKIK 230 Q + +++ LRLS+ LR+VH GLEYGA+ VK HLE V L L +V++ + Sbjct: 1125 QNRHVNQRVTLRLSKKLRSVHSGLEYGAIEVKEHLEKVILSDLATNVRIVYE----ELGE 1180 Query: 231 HSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365 E + ++ + PW+ H L KE+L+ K L + +++ L EY Sbjct: 1181 SDMEDMRIPNARLSPWITHILLCKERLKRKKLTVQSIVSALDREY 1225 >XP_018452283.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Raphanus sativus] XP_018452284.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Raphanus sativus] Length = 1459 Score = 60.8 bits (146), Expect = 3e-08 Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 1/116 (0%) Frame = +3 Query: 27 LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203 L+ +L G K ++ + L LS L G EYGAL +K+HLE + ++ ++F Sbjct: 911 LKNVLECGSKKGLKEQTMSLYLSETLSKKKHGFEYGALDIKNHLEKLSFSEIVSTSMIIF 970 Query: 204 DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEYAN 371 + K+ P+ PWV HF +SK+ L++K L++ +++ L ++YAN Sbjct: 971 SPRTNTKV------------PMSPWVCHFHISKKVLKQKQLDLESVVSSLNKQYAN 1014 >XP_018820498.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Juglans regia] XP_018820499.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Juglans regia] XP_018820500.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Juglans regia] XP_018820501.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Juglans regia] Length = 1475 Score = 60.5 bits (145), Expect = 3e-08 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 1/114 (0%) Frame = +3 Query: 27 LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203 L+++L SG K K + + LS L G EYGAL +K+HLE + ++ ++F Sbjct: 933 LKKVLESGTRKRSANKTMSIYLSEKLGRQRHGFEYGALEIKNHLERLIFSEIVSTVMIIF 992 Query: 204 DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365 Q K+ S PWV HF + KE R +GL++ ++N L++ Y Sbjct: 993 SPQTCSKMSFS------------PWVCHFHICKEIARMRGLKVHSIINSLQKRY 1034 >XP_018820497.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Juglans regia] Length = 1544 Score = 60.5 bits (145), Expect = 3e-08 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 1/114 (0%) Frame = +3 Query: 27 LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203 L+++L SG K K + + LS L G EYGAL +K+HLE + ++ ++F Sbjct: 1002 LKKVLESGTRKRSANKTMSIYLSEKLGRQRHGFEYGALEIKNHLERLIFSEIVSTVMIIF 1061 Query: 204 DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365 Q K+ S PWV HF + KE R +GL++ ++N L++ Y Sbjct: 1062 SPQTCSKMSFS------------PWVCHFHICKEIARMRGLKVHSIINSLQKRY 1103 >XP_013702317.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Brassica napus] Length = 1444 Score = 57.0 bits (136), Expect = 6e-07 Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 1/116 (0%) Frame = +3 Query: 27 LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203 L+ +L G K ++ + L LS L G EYGAL +K HLE + ++ ++F Sbjct: 900 LKNVLECGSKKGLKEQTMSLYLSETLSKKKHGFEYGALDIKSHLEKLSFSEIVSTSMIIF 959 Query: 204 DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEYAN 371 + + T P+ WV HF +SK+ L++K L++ +++ L ++YAN Sbjct: 960 SPR------------TNTKMPMSSWVCHFHISKKVLKQKQLDVESVVSSLNKQYAN 1003 >XP_013717294.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Brassica napus] Length = 1447 Score = 57.0 bits (136), Expect = 6e-07 Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 1/116 (0%) Frame = +3 Query: 27 LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203 L+ +L G K ++ + L LS L G EYGAL +K HLE + ++ ++F Sbjct: 903 LKNVLECGSKKGLKEQTMSLYLSETLSKKKHGFEYGALDIKSHLEKLSFSEIVSTSMIIF 962 Query: 204 DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEYAN 371 + + T P+ WV HF +SK+ L++K L++ +++ L ++YAN Sbjct: 963 SPR------------TNTKMPMSSWVCHFHISKKVLKQKQLDVGSVVSSLNKQYAN 1006 >XP_013637356.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Brassica oleracea var. oleracea] CDX93859.1 BnaC04g20180D [Brassica napus] Length = 1447 Score = 57.0 bits (136), Expect = 6e-07 Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 1/116 (0%) Frame = +3 Query: 27 LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203 L+ +L G K ++ + L LS L G EYGAL +K HLE + ++ ++F Sbjct: 903 LKNVLECGSKKGLKEQTMSLYLSETLSKKKHGFEYGALDIKSHLEKLSFSEIVSTSMIIF 962 Query: 204 DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEYAN 371 + + T P+ WV HF +SK+ L++K L++ +++ L ++YAN Sbjct: 963 SPR------------TNTKMPMSSWVCHFHISKKVLKQKQLDVGSVVSSLNKQYAN 1006 >XP_006391790.1 hypothetical protein EUTSA_v10023214mg [Eutrema salsugineum] ESQ29076.1 hypothetical protein EUTSA_v10023214mg [Eutrema salsugineum] Length = 1465 Score = 56.2 bits (134), Expect = 1e-06 Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 1/116 (0%) Frame = +3 Query: 27 LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203 L+ +L G K ++ + L LS L G EYG+L +K+HLE + ++ ++F Sbjct: 916 LKNVLECGSKKGQREQTMSLYLSETLSKKKHGFEYGSLDIKNHLEKLSFSEIVSTSMIIF 975 Query: 204 DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEYAN 371 + FT P+ PWV+HF +SK+ +++K L +++ L ++Y + Sbjct: 976 SPR------------KFTRIPLSPWVLHFHISKKAMKQKQLNAESVVSSLNKQYTS 1019 >XP_009411452.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Musa acuminata subsp. malaccensis] Length = 1562 Score = 55.8 bits (133), Expect = 1e-06 Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 7/109 (6%) Frame = +3 Query: 60 DCCKK-------ILLRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVFDSQIY 218 DCCK LL LS+ L G EYGAL VK+HLE V L +++D Sbjct: 994 DCCKSNASTNHTALLFLSKRLHGWRYGCEYGALEVKNHLERVCFFNLIITVMILYDG--- 1050 Query: 219 HKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365 H + +F+ PW++HF +SK+K+ + L + + N L + Y Sbjct: 1051 ----HDVQGTNFS-----PWIMHFHVSKDKMLRRRLNVQLVKNELIKHY 1090 >XP_009411449.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Musa acuminata subsp. malaccensis] XP_009411450.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Musa acuminata subsp. malaccensis] Length = 1569 Score = 55.8 bits (133), Expect = 1e-06 Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 7/109 (6%) Frame = +3 Query: 60 DCCKK-------ILLRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVFDSQIY 218 DCCK LL LS+ L G EYGAL VK+HLE V L +++D Sbjct: 1001 DCCKSNASTNHTALLFLSKRLHGWRYGCEYGALEVKNHLERVCFFNLIITVMILYDG--- 1057 Query: 219 HKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365 H + +F+ PW++HF +SK+K+ + L + + N L + Y Sbjct: 1058 ----HDVQGTNFS-----PWIMHFHVSKDKMLRRRLNVQLVKNELIKHY 1097 >XP_010278508.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X7 [Nelumbo nucifera] Length = 1373 Score = 55.5 bits (132), Expect = 2e-06 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 1/111 (0%) Frame = +3 Query: 27 LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203 L+++L GQ + L LS+ L CG EYGA VK+HLE V + V+F Sbjct: 811 LKKVLECGQKNASADQTASLFLSKKLGRWICGFEYGATEVKNHLERVFFSDVVSTVMVIF 870 Query: 204 DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILK 356 Q +HS+ + S PWV HF + KE + +GL I +++ L+ Sbjct: 871 SPQ-----RHSQMSAS-------PWVCHFHVCKEMMERRGLNIQSIIDALQ 909 >XP_019055894.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X6 [Nelumbo nucifera] Length = 1374 Score = 55.5 bits (132), Expect = 2e-06 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 1/111 (0%) Frame = +3 Query: 27 LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203 L+++L GQ + L LS+ L CG EYGA VK+HLE V + V+F Sbjct: 812 LKKVLECGQKNASADQTASLFLSKKLGRWICGFEYGATEVKNHLERVFFSDVVSTVMVIF 871 Query: 204 DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILK 356 Q +HS+ + S PWV HF + KE + +GL I +++ L+ Sbjct: 872 SPQ-----RHSQMSAS-------PWVCHFHVCKEMMERRGLNIQSIIDALQ 910 >XP_019055893.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X5 [Nelumbo nucifera] Length = 1375 Score = 55.5 bits (132), Expect = 2e-06 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 1/111 (0%) Frame = +3 Query: 27 LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203 L+++L GQ + L LS+ L CG EYGA VK+HLE V + V+F Sbjct: 813 LKKVLECGQKNASADQTASLFLSKKLGRWICGFEYGATEVKNHLERVFFSDVVSTVMVIF 872 Query: 204 DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILK 356 Q +HS+ + S PWV HF + KE + +GL I +++ L+ Sbjct: 873 SPQ-----RHSQMSAS-------PWVCHFHVCKEMMERRGLNIQSIIDALQ 911 >XP_010676559.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Beta vulgaris subsp. vulgaris] XP_010676560.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Beta vulgaris subsp. vulgaris] XP_010676562.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Beta vulgaris subsp. vulgaris] XP_010676563.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Beta vulgaris subsp. vulgaris] KMT12167.1 hypothetical protein BVRB_5g101150 [Beta vulgaris subsp. vulgaris] Length = 1444 Score = 55.5 bits (132), Expect = 2e-06 Identities = 34/111 (30%), Positives = 58/111 (52%) Frame = +3 Query: 30 EEILGSGQGKDCCKKILLRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVFDS 209 +++L SG K + I L LS L+ +H G EYGAL VK+HLE + + +V+ Sbjct: 910 KKVLESGSRKSKGRAISLFLSDKLKRLHYGPEYGALEVKNHLEKLYFSDIVSTIMIVYSP 969 Query: 210 QIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEE 362 + ++ KH + PWV HF + KE ++ L++ +++ LK + Sbjct: 970 ESDNR-KH-----------MCPWVCHFHVRKEVVKRMRLKVFSIIDALKRK 1008 >CDY32191.1 BnaA03g54760D [Brassica napus] Length = 1444 Score = 55.5 bits (132), Expect = 2e-06 Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 1/116 (0%) Frame = +3 Query: 27 LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203 L+ +L G K ++ + L LS L G E+GAL +K HLE + ++ ++F Sbjct: 900 LKNVLECGSKKGLKEQTMSLYLSETLSKKKHGFEFGALDIKSHLEKLSFSEIVSTSMIIF 959 Query: 204 DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEYAN 371 + + T P+ WV HF +SK+ L++K L++ +++ L ++YAN Sbjct: 960 SPR------------TNTKMPMSSWVCHFHISKKVLKQKQLDVESVVSSLNKQYAN 1003 >ONK73338.1 uncharacterized protein A4U43_C04F29910 [Asparagus officinalis] Length = 1445 Score = 55.5 bits (132), Expect = 2e-06 Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 2/115 (1%) Frame = +3 Query: 27 LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203 L+++L GK ++ L LS LR ++ G EYGAL V+ HL+ V VV Sbjct: 916 LKKVLECVPGKTSTERTASLVLSNKLRKLNYGFEYGALAVRDHLDKVFFSD------VVT 969 Query: 204 DSQIYHKIKHSKEALSFTSSPVL-PWVIHFSLSKEKLREKGLEISKLLNILKEEY 365 I++ + KE T P L PWV HF ++KE++ +KG+ +++ L Y Sbjct: 970 SVMIFYAARDIKE----TKGPKLSPWVSHFHINKERMAKKGIHAQSIVDALSGNY 1020 >XP_010533721.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Tarenaya hassleriana] Length = 1455 Score = 55.5 bits (132), Expect = 2e-06 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 1/114 (0%) Frame = +3 Query: 27 LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203 L+ +L G K ++ + L LS L G EYG+L VK+HLE + ++ ++F Sbjct: 913 LKNVLECGSKKGIREQTMSLYLSEILSKKKYGFEYGSLEVKNHLEKLMFSEIVSTVTIIF 972 Query: 204 DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365 Q + T +P+ PWV HF +SKE + K L++ ++ L ++Y Sbjct: 973 SPQ------------ADTKNPLSPWVCHFHVSKELAKRKLLKVESIVQALYKQY 1014