BLASTX nr result

ID: Ephedra29_contig00024266 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00024266
         (371 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJP06334.1 NRPD1a [Pinus tabuliformis]                                 80   6e-15
AJA90781.1 DNA-directed RNA polymerase IV largest subunit [Pinus...    78   2e-14
AJA90773.1 DNA-directed RNA polymerase IV largest subunit [Ginkg...    75   2e-13
AJA90757.1 DNA-directed RNA polymerase IV largest subunit [Cycas...    70   1e-11
XP_018452283.1 PREDICTED: DNA-directed RNA polymerase IV subunit...    61   3e-08
XP_018820498.1 PREDICTED: DNA-directed RNA polymerase IV subunit...    60   3e-08
XP_018820497.1 PREDICTED: DNA-directed RNA polymerase IV subunit...    60   3e-08
XP_013702317.1 PREDICTED: DNA-directed RNA polymerase IV subunit...    57   6e-07
XP_013717294.1 PREDICTED: DNA-directed RNA polymerase IV subunit...    57   6e-07
XP_013637356.1 PREDICTED: DNA-directed RNA polymerase IV subunit...    57   6e-07
XP_006391790.1 hypothetical protein EUTSA_v10023214mg [Eutrema s...    56   1e-06
XP_009411452.1 PREDICTED: DNA-directed RNA polymerase IV subunit...    56   1e-06
XP_009411449.1 PREDICTED: DNA-directed RNA polymerase IV subunit...    56   1e-06
XP_010278508.1 PREDICTED: DNA-directed RNA polymerase IV subunit...    55   2e-06
XP_019055894.1 PREDICTED: DNA-directed RNA polymerase IV subunit...    55   2e-06
XP_019055893.1 PREDICTED: DNA-directed RNA polymerase IV subunit...    55   2e-06
XP_010676559.1 PREDICTED: DNA-directed RNA polymerase IV subunit...    55   2e-06
CDY32191.1 BnaA03g54760D [Brassica napus]                              55   2e-06
ONK73338.1 uncharacterized protein A4U43_C04F29910 [Asparagus of...    55   2e-06
XP_010533721.1 PREDICTED: DNA-directed RNA polymerase IV subunit...    55   2e-06

>AJP06334.1 NRPD1a [Pinus tabuliformis]
          Length = 1856

 Score = 79.7 bits (195), Expect = 6e-15
 Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
 Frame = +3

Query: 69   KKILLRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVFDSQIYHKI-KHSKEA 245
            ++++LRLS  L+++HCG EYGA  VK HLETV L QL+     +    IY K+ K S E+
Sbjct: 1186 QRVILRLSNKLKSIHCGQEYGASKVKEHLETVRLCQLS-----ISTKIIYEKLEKGSIES 1240

Query: 246  LSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365
            +    S + PW  HF L KE+L+E  L +  ++  L +EY
Sbjct: 1241 MKIPMSALSPWAAHFLLCKERLKENKLTVQSVILALNKEY 1280


>AJA90781.1 DNA-directed RNA polymerase IV largest subunit [Pinus canariensis]
          Length = 1821

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
 Frame = +3

Query: 69   KKILLRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVFDSQIYHKI-KHSKEA 245
            ++++LRLS  L+++HCG EYGA  VK HLETV L QL+    +     +Y K+ K S E+
Sbjct: 1186 QRVILRLSNKLKSIHCGQEYGASKVKEHLETVRLCQLSTSTKI-----MYEKLEKGSIES 1240

Query: 246  LSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365
            +    S + PW  HF L KE+L+E  L +  ++  L +EY
Sbjct: 1241 MKIPMSVLSPWAAHFLLCKERLKENKLTVQSVILALNKEY 1280


>AJA90773.1 DNA-directed RNA polymerase IV largest subunit [Ginkgo biloba]
          Length = 1803

 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 45/119 (37%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
 Frame = +3

Query: 21   HGLEEIL---GSGQGKDCCKKILLRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERY 191
            H L+E+L    +G+  +  K + LRLS+ LR +H GLEYGA+ ++ HL+ V L  LT   
Sbjct: 1143 HILKEVLCVRPTGRNGNVNKSVTLRLSKKLRKIHSGLEYGAIELQEHLQKVILSDLTTSV 1202

Query: 192  GVVFDSQIYHKIKHS-KEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365
             +     +Y K+  S  EA+    S   PWV H  LSK++L++K L +  ++  L EEY
Sbjct: 1203 RI-----MYEKLGESVSEAMKIPISAFSPWVTHILLSKKRLKKKKLTVQSVIGSLYEEY 1256


>AJA90757.1 DNA-directed RNA polymerase IV largest subunit [Cycas revoluta]
          Length = 1785

 Score = 70.5 bits (171), Expect = 1e-11
 Identities = 37/105 (35%), Positives = 59/105 (56%)
 Frame = +3

Query: 51   QGKDCCKKILLRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVFDSQIYHKIK 230
            Q +   +++ LRLS+ LR+VH GLEYGA+ VK HLE V L  L     +V++       +
Sbjct: 1125 QNRHVNQRVTLRLSKKLRSVHSGLEYGAIEVKEHLEKVILSDLATNVRIVYE----ELGE 1180

Query: 231  HSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365
               E +   ++ + PW+ H  L KE+L+ K L +  +++ L  EY
Sbjct: 1181 SDMEDMRIPNARLSPWITHILLCKERLKRKKLTVQSIVSALDREY 1225


>XP_018452283.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Raphanus
            sativus] XP_018452284.1 PREDICTED: DNA-directed RNA
            polymerase IV subunit 1 [Raphanus sativus]
          Length = 1459

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
 Frame = +3

Query: 27   LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203
            L+ +L  G  K   ++ + L LS  L     G EYGAL +K+HLE +   ++     ++F
Sbjct: 911  LKNVLECGSKKGLKEQTMSLYLSETLSKKKHGFEYGALDIKNHLEKLSFSEIVSTSMIIF 970

Query: 204  DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEYAN 371
              +   K+            P+ PWV HF +SK+ L++K L++  +++ L ++YAN
Sbjct: 971  SPRTNTKV------------PMSPWVCHFHISKKVLKQKQLDLESVVSSLNKQYAN 1014


>XP_018820498.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Juglans regia] XP_018820499.1 PREDICTED: DNA-directed
            RNA polymerase IV subunit 1 isoform X2 [Juglans regia]
            XP_018820500.1 PREDICTED: DNA-directed RNA polymerase IV
            subunit 1 isoform X2 [Juglans regia] XP_018820501.1
            PREDICTED: DNA-directed RNA polymerase IV subunit 1
            isoform X2 [Juglans regia]
          Length = 1475

 Score = 60.5 bits (145), Expect = 3e-08
 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
 Frame = +3

Query: 27   LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203
            L+++L SG  K    K + + LS  L     G EYGAL +K+HLE +   ++     ++F
Sbjct: 933  LKKVLESGTRKRSANKTMSIYLSEKLGRQRHGFEYGALEIKNHLERLIFSEIVSTVMIIF 992

Query: 204  DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365
              Q   K+  S            PWV HF + KE  R +GL++  ++N L++ Y
Sbjct: 993  SPQTCSKMSFS------------PWVCHFHICKEIARMRGLKVHSIINSLQKRY 1034


>XP_018820497.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Juglans regia]
          Length = 1544

 Score = 60.5 bits (145), Expect = 3e-08
 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
 Frame = +3

Query: 27   LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203
            L+++L SG  K    K + + LS  L     G EYGAL +K+HLE +   ++     ++F
Sbjct: 1002 LKKVLESGTRKRSANKTMSIYLSEKLGRQRHGFEYGALEIKNHLERLIFSEIVSTVMIIF 1061

Query: 204  DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365
              Q   K+  S            PWV HF + KE  R +GL++  ++N L++ Y
Sbjct: 1062 SPQTCSKMSFS------------PWVCHFHICKEIARMRGLKVHSIINSLQKRY 1103


>XP_013702317.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Brassica
            napus]
          Length = 1444

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
 Frame = +3

Query: 27   LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203
            L+ +L  G  K   ++ + L LS  L     G EYGAL +K HLE +   ++     ++F
Sbjct: 900  LKNVLECGSKKGLKEQTMSLYLSETLSKKKHGFEYGALDIKSHLEKLSFSEIVSTSMIIF 959

Query: 204  DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEYAN 371
              +            + T  P+  WV HF +SK+ L++K L++  +++ L ++YAN
Sbjct: 960  SPR------------TNTKMPMSSWVCHFHISKKVLKQKQLDVESVVSSLNKQYAN 1003


>XP_013717294.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Brassica
            napus]
          Length = 1447

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
 Frame = +3

Query: 27   LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203
            L+ +L  G  K   ++ + L LS  L     G EYGAL +K HLE +   ++     ++F
Sbjct: 903  LKNVLECGSKKGLKEQTMSLYLSETLSKKKHGFEYGALDIKSHLEKLSFSEIVSTSMIIF 962

Query: 204  DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEYAN 371
              +            + T  P+  WV HF +SK+ L++K L++  +++ L ++YAN
Sbjct: 963  SPR------------TNTKMPMSSWVCHFHISKKVLKQKQLDVGSVVSSLNKQYAN 1006


>XP_013637356.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Brassica
            oleracea var. oleracea] CDX93859.1 BnaC04g20180D
            [Brassica napus]
          Length = 1447

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
 Frame = +3

Query: 27   LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203
            L+ +L  G  K   ++ + L LS  L     G EYGAL +K HLE +   ++     ++F
Sbjct: 903  LKNVLECGSKKGLKEQTMSLYLSETLSKKKHGFEYGALDIKSHLEKLSFSEIVSTSMIIF 962

Query: 204  DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEYAN 371
              +            + T  P+  WV HF +SK+ L++K L++  +++ L ++YAN
Sbjct: 963  SPR------------TNTKMPMSSWVCHFHISKKVLKQKQLDVGSVVSSLNKQYAN 1006


>XP_006391790.1 hypothetical protein EUTSA_v10023214mg [Eutrema salsugineum]
            ESQ29076.1 hypothetical protein EUTSA_v10023214mg
            [Eutrema salsugineum]
          Length = 1465

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
 Frame = +3

Query: 27   LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203
            L+ +L  G  K   ++ + L LS  L     G EYG+L +K+HLE +   ++     ++F
Sbjct: 916  LKNVLECGSKKGQREQTMSLYLSETLSKKKHGFEYGSLDIKNHLEKLSFSEIVSTSMIIF 975

Query: 204  DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEYAN 371
              +             FT  P+ PWV+HF +SK+ +++K L    +++ L ++Y +
Sbjct: 976  SPR------------KFTRIPLSPWVLHFHISKKAMKQKQLNAESVVSSLNKQYTS 1019


>XP_009411452.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Musa
            acuminata subsp. malaccensis]
          Length = 1562

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
 Frame = +3

Query: 60   DCCKK-------ILLRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVFDSQIY 218
            DCCK         LL LS+ L     G EYGAL VK+HLE V    L     +++D    
Sbjct: 994  DCCKSNASTNHTALLFLSKRLHGWRYGCEYGALEVKNHLERVCFFNLIITVMILYDG--- 1050

Query: 219  HKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365
                H  +  +F+     PW++HF +SK+K+  + L +  + N L + Y
Sbjct: 1051 ----HDVQGTNFS-----PWIMHFHVSKDKMLRRRLNVQLVKNELIKHY 1090


>XP_009411449.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Musa
            acuminata subsp. malaccensis] XP_009411450.1 PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 isoform X1 [Musa
            acuminata subsp. malaccensis]
          Length = 1569

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
 Frame = +3

Query: 60   DCCKK-------ILLRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVFDSQIY 218
            DCCK         LL LS+ L     G EYGAL VK+HLE V    L     +++D    
Sbjct: 1001 DCCKSNASTNHTALLFLSKRLHGWRYGCEYGALEVKNHLERVCFFNLIITVMILYDG--- 1057

Query: 219  HKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365
                H  +  +F+     PW++HF +SK+K+  + L +  + N L + Y
Sbjct: 1058 ----HDVQGTNFS-----PWIMHFHVSKDKMLRRRLNVQLVKNELIKHY 1097


>XP_010278508.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X7
            [Nelumbo nucifera]
          Length = 1373

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
 Frame = +3

Query: 27   LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203
            L+++L  GQ      +   L LS+ L    CG EYGA  VK+HLE V    +     V+F
Sbjct: 811  LKKVLECGQKNASADQTASLFLSKKLGRWICGFEYGATEVKNHLERVFFSDVVSTVMVIF 870

Query: 204  DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILK 356
              Q     +HS+ + S       PWV HF + KE +  +GL I  +++ L+
Sbjct: 871  SPQ-----RHSQMSAS-------PWVCHFHVCKEMMERRGLNIQSIIDALQ 909


>XP_019055894.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X6
            [Nelumbo nucifera]
          Length = 1374

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
 Frame = +3

Query: 27   LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203
            L+++L  GQ      +   L LS+ L    CG EYGA  VK+HLE V    +     V+F
Sbjct: 812  LKKVLECGQKNASADQTASLFLSKKLGRWICGFEYGATEVKNHLERVFFSDVVSTVMVIF 871

Query: 204  DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILK 356
              Q     +HS+ + S       PWV HF + KE +  +GL I  +++ L+
Sbjct: 872  SPQ-----RHSQMSAS-------PWVCHFHVCKEMMERRGLNIQSIIDALQ 910


>XP_019055893.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X5
            [Nelumbo nucifera]
          Length = 1375

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
 Frame = +3

Query: 27   LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203
            L+++L  GQ      +   L LS+ L    CG EYGA  VK+HLE V    +     V+F
Sbjct: 813  LKKVLECGQKNASADQTASLFLSKKLGRWICGFEYGATEVKNHLERVFFSDVVSTVMVIF 872

Query: 204  DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILK 356
              Q     +HS+ + S       PWV HF + KE +  +GL I  +++ L+
Sbjct: 873  SPQ-----RHSQMSAS-------PWVCHFHVCKEMMERRGLNIQSIIDALQ 911


>XP_010676559.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Beta vulgaris
            subsp. vulgaris] XP_010676560.1 PREDICTED: DNA-directed
            RNA polymerase IV subunit 1 [Beta vulgaris subsp.
            vulgaris] XP_010676562.1 PREDICTED: DNA-directed RNA
            polymerase IV subunit 1 [Beta vulgaris subsp. vulgaris]
            XP_010676563.1 PREDICTED: DNA-directed RNA polymerase IV
            subunit 1 [Beta vulgaris subsp. vulgaris] KMT12167.1
            hypothetical protein BVRB_5g101150 [Beta vulgaris subsp.
            vulgaris]
          Length = 1444

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 34/111 (30%), Positives = 58/111 (52%)
 Frame = +3

Query: 30   EEILGSGQGKDCCKKILLRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVFDS 209
            +++L SG  K   + I L LS  L+ +H G EYGAL VK+HLE +    +     +V+  
Sbjct: 910  KKVLESGSRKSKGRAISLFLSDKLKRLHYGPEYGALEVKNHLEKLYFSDIVSTIMIVYSP 969

Query: 210  QIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEE 362
            +  ++ KH           + PWV HF + KE ++   L++  +++ LK +
Sbjct: 970  ESDNR-KH-----------MCPWVCHFHVRKEVVKRMRLKVFSIIDALKRK 1008


>CDY32191.1 BnaA03g54760D [Brassica napus]
          Length = 1444

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
 Frame = +3

Query: 27   LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203
            L+ +L  G  K   ++ + L LS  L     G E+GAL +K HLE +   ++     ++F
Sbjct: 900  LKNVLECGSKKGLKEQTMSLYLSETLSKKKHGFEFGALDIKSHLEKLSFSEIVSTSMIIF 959

Query: 204  DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEYAN 371
              +            + T  P+  WV HF +SK+ L++K L++  +++ L ++YAN
Sbjct: 960  SPR------------TNTKMPMSSWVCHFHISKKVLKQKQLDVESVVSSLNKQYAN 1003


>ONK73338.1 uncharacterized protein A4U43_C04F29910 [Asparagus officinalis]
          Length = 1445

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
 Frame = +3

Query: 27   LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203
            L+++L    GK   ++   L LS  LR ++ G EYGAL V+ HL+ V          VV 
Sbjct: 916  LKKVLECVPGKTSTERTASLVLSNKLRKLNYGFEYGALAVRDHLDKVFFSD------VVT 969

Query: 204  DSQIYHKIKHSKEALSFTSSPVL-PWVIHFSLSKEKLREKGLEISKLLNILKEEY 365
               I++  +  KE    T  P L PWV HF ++KE++ +KG+    +++ L   Y
Sbjct: 970  SVMIFYAARDIKE----TKGPKLSPWVSHFHINKERMAKKGIHAQSIVDALSGNY 1020


>XP_010533721.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
            [Tarenaya hassleriana]
          Length = 1455

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
 Frame = +3

Query: 27   LEEILGSGQGKDCCKKIL-LRLSRDLRNVHCGLEYGALLVKHHLETVELLQLTERYGVVF 203
            L+ +L  G  K   ++ + L LS  L     G EYG+L VK+HLE +   ++     ++F
Sbjct: 913  LKNVLECGSKKGIREQTMSLYLSEILSKKKYGFEYGSLEVKNHLEKLMFSEIVSTVTIIF 972

Query: 204  DSQIYHKIKHSKEALSFTSSPVLPWVIHFSLSKEKLREKGLEISKLLNILKEEY 365
              Q            + T +P+ PWV HF +SKE  + K L++  ++  L ++Y
Sbjct: 973  SPQ------------ADTKNPLSPWVCHFHVSKELAKRKLLKVESIVQALYKQY 1014


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