BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00024222
         (672 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJA90765.1 Dicer-like 3 [Ephedra trifurca]                            452   e-145
AJA90772.1 Dicer-like 3 [Ginkgo biloba]                               266   1e-78
AJA90780.1 Dicer-like 3 [Pinus canariensis]                           266   1e-78
AJP06283.1 DCL3a [Pinus tabuliformis]                                 265   3e-78
AJA90756.1 Dicer-like 3 [Cycas revoluta]                              245   2e-71
AJP06284.1 DCL3b [Pinus tabuliformis]                                 241   5e-70
EOY30081.1 Endoribonuclease Dicera, putative isoform 2 [Theobrom...   233   3e-67
XP_007012461.2 PREDICTED: endoribonuclease Dicer homolog 3 [Theo...   233   3e-67
EOY30080.1 Ribonuclease III, putative isoform 1 [Theobroma cacao]     233   3e-67
JAT39986.1 Endoribonuclease Dicer 3a [Anthurium amnicola]             231   2e-66
JAT65431.1 Endoribonuclease Dicer 3a [Anthurium amnicola]             231   2e-66
XP_020097206.1 endoribonuclease Dicer homolog 3a-like [Ananas co...   230   4e-66
OAY79925.1 Endoribonuclease Dicer a [Ananas comosus]                  230   4e-66
XP_012450058.1 PREDICTED: endoribonuclease Dicer homolog 3 isofo...   230   5e-66
XP_012450059.1 PREDICTED: endoribonuclease Dicer homolog 3 isofo...   230   5e-66
XP_012450060.1 PREDICTED: endoribonuclease Dicer homolog 3 isofo...   230   5e-66
XP_012450061.1 PREDICTED: endoribonuclease Dicer homolog 3 isofo...   230   5e-66
XP_016682324.1 PREDICTED: LOW QUALITY PROTEIN: endoribonuclease ...   230   5e-66
XP_012450062.1 PREDICTED: endoribonuclease Dicer homolog 3 isofo...   230   5e-66
KJB65396.1 hypothetical protein B456_010G093100 [Gossypium raimo...   230   5e-66

>AJA90765.1 Dicer-like 3 [Ephedra trifurca]
          Length = 1678

 Score =  452 bits (1162), Expect = e-145
 Identities = 222/223 (99%), Positives = 222/223 (99%)
 Frame = -3

Query: 670  PFAHKTKGTEDADIDEINEVTLMEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLAS 491
            PFAHKTKGTEDADIDE NEVTLMEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLAS
Sbjct: 997  PFAHKTKGTEDADIDESNEVTLMEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLAS 1056

Query: 490  QLRQEINKNLTFSIPSTLIMQAMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDK 311
            QLRQEINKNLTFSIPSTLIMQAMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDK
Sbjct: 1057 QLRQEINKNLTFSIPSTLIMQAMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDK 1116

Query: 310  HEGQLTLYRSKAVCNATLHQLAIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRCEEME 131
            HEGQLTLYRSKAVCNATLHQLAIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRCEEME
Sbjct: 1117 HEGQLTLYRSKAVCNATLHQLAIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRCEEME 1176

Query: 130  DKSIEDDEIIVKIGKACNKGHRWMTSKTISDGIEALIGAYMVG 2
            DKSIEDDEIIVKIGKACNKGHRWMTSKTISDGIEALIGAYMVG
Sbjct: 1177 DKSIEDDEIIVKIGKACNKGHRWMTSKTISDGIEALIGAYMVG 1219


>AJA90772.1 Dicer-like 3 [Ginkgo biloba]
          Length = 1815

 Score =  266 bits (681), Expect = 1e-78
 Identities = 136/226 (60%), Positives = 171/226 (75%), Gaps = 7/226 (3%)
 Frame = -3

Query: 658  KTKGTE-DADIDEINEVTLMEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLR 482
            K+KG E +  +D  N +   E+P ELCLNLGV + ++R+LYLVPS+M+R+T LML  QLR
Sbjct: 1032 KSKGKECNLKLDGPNYI---ELPPELCLNLGVSSSVIRSLYLVPSVMHRMTTLMLGCQLR 1088

Query: 481  QEINKNLTF-SIPSTLIMQAMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHE 305
             EI  + +  SIP++LIMQA+TT RC E FS ERLELLGDSVLKYAVSC+LF+KY  KHE
Sbjct: 1089 DEIKDHPSCPSIPASLIMQALTTTRCLENFSFERLELLGDSVLKYAVSCHLFLKYDKKHE 1148

Query: 304  GQLTLYRSKAVCNATLHQLAIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRC-----E 140
            GQL+  RS A+CNATLH LA  +NLPGY+RDEPFDP +W+APG  C++VV C C     E
Sbjct: 1149 GQLSARRSWAICNATLHGLAARRNLPGYVRDEPFDPRRWVAPGMLCSKVVACCCNTRNFE 1208

Query: 139  EMEDKSIEDDEIIVKIGKACNKGHRWMTSKTISDGIEALIGAYMVG 2
            E      E++  +VKIGK C+KGHRWM SKT++D +EALIGAY+VG
Sbjct: 1209 ESVKVVSENEYRVVKIGKTCDKGHRWMCSKTVADSVEALIGAYLVG 1254


>AJA90780.1 Dicer-like 3 [Pinus canariensis]
          Length = 1803

 Score =  266 bits (680), Expect = 1e-78
 Identities = 135/208 (64%), Positives = 166/208 (79%), Gaps = 7/208 (3%)
 Frame = -3

Query: 604  MEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEINK--NLTFSIPSTLIM 431
            +E+P ELCLNLGVPN ++R+LYLVPS+M+R+ +LMLA+QLRQEI +  N  F IP+TLIM
Sbjct: 1062 IEMPPELCLNLGVPNSVIRSLYLVPSVMHRMASLMLATQLRQEIQECSNCPF-IPATLIM 1120

Query: 430  QAMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQLTLYRSKAVCNATLHQ 251
            QA+TTMRC E FS ERLELLGDSVLKYAVS +LF+KY++KHEGQLT  RS A+CNA+LH+
Sbjct: 1121 QAVTTMRCLESFSLERLELLGDSVLKYAVSSHLFLKYNEKHEGQLTARRSWAICNASLHR 1180

Query: 250  LAIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRCE-----EMEDKSIEDDEIIVKIGK 86
            +AI +NLPGYIRDEPFDP +W APGT   + V C C+     E  +   E +   VKIGK
Sbjct: 1181 VAILRNLPGYIRDEPFDPRRWFAPGTLSPKSVPCCCDSNFLKESVNGMSEMEGKTVKIGK 1240

Query: 85   ACNKGHRWMTSKTISDGIEALIGAYMVG 2
             C+KGHRWM SKTI+D +EALIGAY+VG
Sbjct: 1241 TCDKGHRWMCSKTIADSVEALIGAYLVG 1268


>AJP06283.1 DCL3a [Pinus tabuliformis]
          Length = 1871

 Score =  265 bits (677), Expect = 3e-78
 Identities = 135/208 (64%), Positives = 165/208 (79%), Gaps = 7/208 (3%)
 Frame = -3

Query: 604  MEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEINK--NLTFSIPSTLIM 431
            +E+P ELCLNLGVPN ++R+LYLVPS+M+R+ +LMLA+QLRQEI +  N  F IP+TLIM
Sbjct: 1059 IEMPPELCLNLGVPNSVIRSLYLVPSVMHRMASLMLATQLRQEIQECSNCPF-IPATLIM 1117

Query: 430  QAMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQLTLYRSKAVCNATLHQ 251
            QA+TTMRC E FS ERLELLGDSVLKYAVS +LF+KY+ KHEGQLT  RS A+CNA+LH+
Sbjct: 1118 QAVTTMRCLESFSLERLELLGDSVLKYAVSSHLFLKYNKKHEGQLTARRSWAICNASLHR 1177

Query: 250  LAIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRCE-----EMEDKSIEDDEIIVKIGK 86
            +AI +NLPGYIRDEPFDP +W APGT   + V C C+     E  +   E +   VKIGK
Sbjct: 1178 VAILRNLPGYIRDEPFDPRRWFAPGTLSPKSVPCCCDSNFLKESVNGMSEMEGKTVKIGK 1237

Query: 85   ACNKGHRWMTSKTISDGIEALIGAYMVG 2
             C+KGHRWM SKTI+D +EALIGAY+VG
Sbjct: 1238 TCDKGHRWMCSKTIADSVEALIGAYLVG 1265


>AJA90756.1 Dicer-like 3 [Cycas revoluta]
          Length = 1876

 Score =  245 bits (626), Expect = 2e-71
 Identities = 124/213 (58%), Positives = 157/213 (73%), Gaps = 7/213 (3%)
 Frame = -3

Query: 619  NEVTLMEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEINKNLTFS--IP 446
            +E   +E+P ELCL LGV   ++R+LY +PS+M+R+T+LMLASQLR+ I +       +P
Sbjct: 1028 DEANYVELPPELCLYLGVSGSVIRSLYFIPSVMHRLTSLMLASQLRKAIREERPKCPLVP 1087

Query: 445  STLIMQAMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQLTLYRSKAVCN 266
             TLIM+A+TT+RC E FS ERLELLGDS LKYAVS +LF+KY  KHEGQL+  RS A+ N
Sbjct: 1088 VTLIMEALTTLRCLESFSFERLELLGDSFLKYAVSRHLFLKYEKKHEGQLSTRRSWAISN 1147

Query: 265  ATLHQLAIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRC--EEMEDK---SIEDDEII 101
            ATLH++A+  NLPGYI+DEPFDP  W APG  C R + CRC  + +ED    S   +  +
Sbjct: 1148 ATLHRIAMTCNLPGYIQDEPFDPRHWAAPGMLCRRAIACRCNLKNLEDSVKCSSTREHKV 1207

Query: 100  VKIGKACNKGHRWMTSKTISDGIEALIGAYMVG 2
            VKIGKAC KGHRWM SKTISD +EALI A++VG
Sbjct: 1208 VKIGKACGKGHRWMCSKTISDAVEALIAAHLVG 1240


>AJP06284.1 DCL3b [Pinus tabuliformis]
          Length = 1792

 Score =  241 bits (616), Expect = 5e-70
 Identities = 123/224 (54%), Positives = 165/224 (73%), Gaps = 7/224 (3%)
 Frame = -3

Query: 652  KGTEDADIDEINEVTLMEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEI 473
            KG + + +DE N V   E+P ELCL+LGV + ++R+LYL+PS+M+R+ +L+LA QLR+ I
Sbjct: 1013 KGRQHSIVDEANFV---ELPPELCLDLGVSSSVIRSLYLIPSVMHRLNSLVLAGQLRKAI 1069

Query: 472  NKNLTFS--IPSTLIMQAMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQ 299
             +       IP+ LIM+A+TT RC E FS ERLELLGDS LKYA+S +LF+KY  KHEGQ
Sbjct: 1070 REERPTCPPIPAALIMEALTTSRCFECFSYERLELLGDSFLKYAISRHLFLKYEKKHEGQ 1129

Query: 298  LTLYRSKAVCNATLHQLAIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRCE-----EM 134
            L+  R+  + NATLH+LA+ +NLP YIRDEPFD  +WIAPG  C RV+ C C      + 
Sbjct: 1130 LSACRAWGISNATLHRLAMTRNLPEYIRDEPFDTRRWIAPGMLCRRVIPCCCNITNYLDN 1189

Query: 133  EDKSIEDDEIIVKIGKACNKGHRWMTSKTISDGIEALIGAYMVG 2
             + SI  ++ +VKIGKAC++GHRWM SKTISD +E+LIGA++VG
Sbjct: 1190 ANCSIGKEDNMVKIGKACDEGHRWMCSKTISDVVESLIGAHLVG 1233


>EOY30081.1 Endoribonuclease Dicera, putative isoform 2 [Theobroma cacao]
          Length = 1255

 Score =  233 bits (595), Expect = 3e-67
 Identities = 116/206 (56%), Positives = 152/206 (73%), Gaps = 6/206 (2%)
 Frame = -3

Query: 604  MEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEIN-KNLTFSIPSTLIMQ 428
            + +P EL L L VP  +++  YL+PS+M+R+ +LMLASQLR+EIN  +  F IPS+LI++
Sbjct: 602  VHMPPELLLVLDVPIDVLKAFYLLPSLMHRLESLMLASQLREEINFHSSNFDIPSSLILE 661

Query: 427  AMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQLTLYRSKAVCNATLHQL 248
            A+TT+RC E FS ERLELLGDSVLKYAVSC+LF++Y   HEGQL+  RS AVCN+TLH+L
Sbjct: 662  ALTTLRCCESFSMERLELLGDSVLKYAVSCHLFLRYPKNHEGQLSAKRSWAVCNSTLHKL 721

Query: 247  AIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRC-----EEMEDKSIEDDEIIVKIGKA 83
               + L GYIRD  FDP +W+APG    R V C+C     E   DK  + ++  VK+GK+
Sbjct: 722  GTDRRLQGYIRDSAFDPRRWVAPGQLSLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKS 781

Query: 82   CNKGHRWMTSKTISDGIEALIGAYMV 5
            C++GHRWM SKTISD +EALIGAY +
Sbjct: 782  CDRGHRWMCSKTISDCVEALIGAYYI 807


>XP_007012461.2 PREDICTED: endoribonuclease Dicer homolog 3 [Theobroma cacao]
          Length = 1664

 Score =  233 bits (595), Expect = 3e-67
 Identities = 116/206 (56%), Positives = 152/206 (73%), Gaps = 6/206 (2%)
 Frame = -3

Query: 604  MEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEIN-KNLTFSIPSTLIMQ 428
            + +P EL L L VP  +++  YL+PS+M+R+ +LMLASQLR+EIN  +  F IPS+LI++
Sbjct: 1011 VHMPPELLLVLDVPIDVLKAFYLLPSLMHRLESLMLASQLREEINFHSSNFDIPSSLILE 1070

Query: 427  AMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQLTLYRSKAVCNATLHQL 248
            A+TT+RC E FS ERLELLGDSVLKYAVSC+LF++Y   HEGQL+  RS AVCN+TLH+L
Sbjct: 1071 ALTTLRCCESFSMERLELLGDSVLKYAVSCHLFLRYPKNHEGQLSAKRSWAVCNSTLHKL 1130

Query: 247  AIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRC-----EEMEDKSIEDDEIIVKIGKA 83
               + L GYIRD  FDP +W+APG    R V C+C     E   DK  + ++  VK+GK+
Sbjct: 1131 GTDRRLQGYIRDSAFDPRRWVAPGQLSLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKS 1190

Query: 82   CNKGHRWMTSKTISDGIEALIGAYMV 5
            C++GHRWM SKTISD +EALIGAY +
Sbjct: 1191 CDRGHRWMCSKTISDCVEALIGAYYI 1216


>EOY30080.1 Ribonuclease III, putative isoform 1 [Theobroma cacao]
          Length = 1639

 Score =  233 bits (595), Expect = 3e-67
 Identities = 116/206 (56%), Positives = 152/206 (73%), Gaps = 6/206 (2%)
 Frame = -3

Query: 604  MEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEIN-KNLTFSIPSTLIMQ 428
            + +P EL L L VP  +++  YL+PS+M+R+ +LMLASQLR+EIN  +  F IPS+LI++
Sbjct: 986  VHMPPELLLVLDVPIDVLKAFYLLPSLMHRLESLMLASQLREEINFHSSNFDIPSSLILE 1045

Query: 427  AMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQLTLYRSKAVCNATLHQL 248
            A+TT+RC E FS ERLELLGDSVLKYAVSC+LF++Y   HEGQL+  RS AVCN+TLH+L
Sbjct: 1046 ALTTLRCCESFSMERLELLGDSVLKYAVSCHLFLRYPKNHEGQLSAKRSWAVCNSTLHKL 1105

Query: 247  AIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRC-----EEMEDKSIEDDEIIVKIGKA 83
               + L GYIRD  FDP +W+APG    R V C+C     E   DK  + ++  VK+GK+
Sbjct: 1106 GTDRRLQGYIRDSAFDPRRWVAPGQLSLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKS 1165

Query: 82   CNKGHRWMTSKTISDGIEALIGAYMV 5
            C++GHRWM SKTISD +EALIGAY +
Sbjct: 1166 CDRGHRWMCSKTISDCVEALIGAYYI 1191


>JAT39986.1 Endoribonuclease Dicer 3a [Anthurium amnicola]
          Length = 1693

 Score =  231 bits (590), Expect = 2e-66
 Identities = 118/204 (57%), Positives = 150/204 (73%), Gaps = 5/204 (2%)
 Frame = -3

Query: 598  IPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEINKNLTFSIPSTLIMQAMT 419
            +P EL +++ V   ++R+ YL+PS+MYR+ +LMLASQLR+EI  N    +PS+LI++A+T
Sbjct: 1022 MPPELLVHVDVSVEVLRSFYLLPSLMYRLESLMLASQLREEIASNCI--VPSSLILEAIT 1079

Query: 418  TMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQLTLYRSKAVCNATLHQLAIH 239
            T+RC E FS ERLELLGDS+LKYAVSC LF+KY  KHEGQL+  RS+AVCNATL++L I 
Sbjct: 1080 TVRCCENFSLERLELLGDSILKYAVSCNLFLKYPQKHEGQLSACRSRAVCNATLYKLGIS 1139

Query: 238  KNLPGYIRDEPFDPLKWIAPGTYCTRVVECRCEEMEDK-----SIEDDEIIVKIGKACNK 74
             NL GYIRD  FDP +W+APG  C R V C+C+    K       E  E  + IGKAC+ 
Sbjct: 1140 CNLQGYIRDAAFDPRRWVAPGQACLRPVHCKCDADTSKVPMKVKYEKGESPLVIGKACDN 1199

Query: 73   GHRWMTSKTISDGIEALIGAYMVG 2
            GHRW+ SKTISD +EALIGAY VG
Sbjct: 1200 GHRWICSKTISDCVEALIGAYYVG 1223


>JAT65431.1 Endoribonuclease Dicer 3a [Anthurium amnicola]
          Length = 1648

 Score =  231 bits (590), Expect = 2e-66
 Identities = 118/204 (57%), Positives = 150/204 (73%), Gaps = 5/204 (2%)
 Frame = -3

Query: 598  IPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEINKNLTFSIPSTLIMQAMT 419
            +P EL +++ V   ++R+ YL+PS+MYR+ +LMLASQLR+EI  N    +PS+LI++A+T
Sbjct: 977  MPPELLVHVDVSVEVLRSFYLLPSLMYRLESLMLASQLREEIASNCI--VPSSLILEAIT 1034

Query: 418  TMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQLTLYRSKAVCNATLHQLAIH 239
            T+RC E FS ERLELLGDS+LKYAVSC LF+KY  KHEGQL+  RS+AVCNATL++L I 
Sbjct: 1035 TVRCCENFSLERLELLGDSILKYAVSCNLFLKYPQKHEGQLSACRSRAVCNATLYKLGIS 1094

Query: 238  KNLPGYIRDEPFDPLKWIAPGTYCTRVVECRCEEMEDK-----SIEDDEIIVKIGKACNK 74
             NL GYIRD  FDP +W+APG  C R V C+C+    K       E  E  + IGKAC+ 
Sbjct: 1095 CNLQGYIRDAAFDPRRWVAPGQACLRPVHCKCDADTSKVPMKVKYEKGESPLVIGKACDN 1154

Query: 73   GHRWMTSKTISDGIEALIGAYMVG 2
            GHRW+ SKTISD +EALIGAY VG
Sbjct: 1155 GHRWICSKTISDCVEALIGAYYVG 1178


>XP_020097206.1 endoribonuclease Dicer homolog 3a-like [Ananas comosus]
          Length = 1660

 Score =  230 bits (587), Expect = 4e-66
 Identities = 113/209 (54%), Positives = 159/209 (76%), Gaps = 8/209 (3%)
 Frame = -3

Query: 604  MEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEINKNLTFS-IPSTLIMQ 428
            + +P EL +++ +P  ++++ YL+PS+M+R+ +LMLASQLR+E+  N + S IPS+LI++
Sbjct: 1005 VHMPPELLVHINIPLDVLKSFYLLPSLMHRMESLMLASQLRREVAFNPSNSCIPSSLILE 1064

Query: 427  AMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQLTLYRSKAVCNATLHQL 248
            A+TTMRC E FS ERLELLGDSVLKYAV+C+LF+K+ +K+EGQL+  R++ +CNATLH+L
Sbjct: 1065 AITTMRCCEDFSLERLELLGDSVLKYAVTCHLFLKFPEKNEGQLSSRRTQIICNATLHRL 1124

Query: 247  AIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRCEEMEDKS-------IEDDEIIVKIG 89
             + +N+ GYIRD PFDP +W+APG    R V C+C  +ED         + DD   + IG
Sbjct: 1125 GMKRNIQGYIRDSPFDPRRWLAPGQISIRPVPCKC-PVEDSGFSKKGIYVNDDNKSIVIG 1183

Query: 88   KACNKGHRWMTSKTISDGIEALIGAYMVG 2
            K+C+KGHRW+ SKTISD +EALIGAY VG
Sbjct: 1184 KSCDKGHRWICSKTISDCVEALIGAYYVG 1212


>OAY79925.1 Endoribonuclease Dicer a [Ananas comosus]
          Length = 1632

 Score =  230 bits (587), Expect = 4e-66
 Identities = 113/209 (54%), Positives = 159/209 (76%), Gaps = 8/209 (3%)
 Frame = -3

Query: 604  MEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEINKNLTFS-IPSTLIMQ 428
            + +P EL +++ +P  ++++ YL+PS+M+R+ +LMLASQLR+E+  N + S IPS+LI++
Sbjct: 977  VHMPPELLVHINIPLDVLKSFYLLPSLMHRMESLMLASQLRREVAFNPSNSCIPSSLILE 1036

Query: 427  AMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQLTLYRSKAVCNATLHQL 248
            A+TTMRC E FS ERLELLGDSVLKYAV+C+LF+K+ +K+EGQL+  R++ +CNATLH+L
Sbjct: 1037 AITTMRCCEDFSLERLELLGDSVLKYAVTCHLFLKFPEKNEGQLSSRRTQIICNATLHRL 1096

Query: 247  AIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRCEEMEDKS-------IEDDEIIVKIG 89
             + +N+ GYIRD PFDP +W+APG    R V C+C  +ED         + DD   + IG
Sbjct: 1097 GMKRNIQGYIRDSPFDPRRWLAPGQISIRPVPCKC-PVEDSGFSKKGIYVNDDNKSIVIG 1155

Query: 88   KACNKGHRWMTSKTISDGIEALIGAYMVG 2
            K+C+KGHRW+ SKTISD +EALIGAY VG
Sbjct: 1156 KSCDKGHRWICSKTISDCVEALIGAYYVG 1184


>XP_012450058.1 PREDICTED: endoribonuclease Dicer homolog 3 isoform X1 [Gossypium
            raimondii]
          Length = 1690

 Score =  230 bits (586), Expect = 5e-66
 Identities = 113/204 (55%), Positives = 153/204 (75%), Gaps = 6/204 (2%)
 Frame = -3

Query: 604  MEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEINK-NLTFSIPSTLIMQ 428
            + +P EL L L VP  ++++LYL+PS+M+R+ +LMLA+QLR+EIN  +    IPS++I++
Sbjct: 1034 VHMPPELLLVLDVPVSVLKSLYLLPSLMHRLESLMLANQLREEINFCSSNIDIPSSMILE 1093

Query: 427  AMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQLTLYRSKAVCNATLHQL 248
            A+TT+RC E FS ERLELLGDSVLKYAVSC+LF++Y +KHEGQL+  RS AVCN+TLH+L
Sbjct: 1094 ALTTLRCCESFSMERLELLGDSVLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNSTLHKL 1153

Query: 247  AIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRC-----EEMEDKSIEDDEIIVKIGKA 83
                 + GYIRD  FDP +W+APG    R V C+C     E   DK  + ++  VK+GK+
Sbjct: 1154 GTDHKIQGYIRDSAFDPRRWVAPGQRVLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKS 1213

Query: 82   CNKGHRWMTSKTISDGIEALIGAY 11
            C++GHRW+ SKTISD +EALIGAY
Sbjct: 1214 CDRGHRWLCSKTISDCVEALIGAY 1237


>XP_012450059.1 PREDICTED: endoribonuclease Dicer homolog 3 isoform X2 [Gossypium
            raimondii]
          Length = 1688

 Score =  230 bits (586), Expect = 5e-66
 Identities = 113/204 (55%), Positives = 153/204 (75%), Gaps = 6/204 (2%)
 Frame = -3

Query: 604  MEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEINK-NLTFSIPSTLIMQ 428
            + +P EL L L VP  ++++LYL+PS+M+R+ +LMLA+QLR+EIN  +    IPS++I++
Sbjct: 1032 VHMPPELLLVLDVPVSVLKSLYLLPSLMHRLESLMLANQLREEINFCSSNIDIPSSMILE 1091

Query: 427  AMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQLTLYRSKAVCNATLHQL 248
            A+TT+RC E FS ERLELLGDSVLKYAVSC+LF++Y +KHEGQL+  RS AVCN+TLH+L
Sbjct: 1092 ALTTLRCCESFSMERLELLGDSVLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNSTLHKL 1151

Query: 247  AIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRC-----EEMEDKSIEDDEIIVKIGKA 83
                 + GYIRD  FDP +W+APG    R V C+C     E   DK  + ++  VK+GK+
Sbjct: 1152 GTDHKIQGYIRDSAFDPRRWVAPGQRVLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKS 1211

Query: 82   CNKGHRWMTSKTISDGIEALIGAY 11
            C++GHRW+ SKTISD +EALIGAY
Sbjct: 1212 CDRGHRWLCSKTISDCVEALIGAY 1235


>XP_012450060.1 PREDICTED: endoribonuclease Dicer homolog 3 isoform X3 [Gossypium
            raimondii]
          Length = 1687

 Score =  230 bits (586), Expect = 5e-66
 Identities = 113/204 (55%), Positives = 153/204 (75%), Gaps = 6/204 (2%)
 Frame = -3

Query: 604  MEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEINK-NLTFSIPSTLIMQ 428
            + +P EL L L VP  ++++LYL+PS+M+R+ +LMLA+QLR+EIN  +    IPS++I++
Sbjct: 1031 VHMPPELLLVLDVPVSVLKSLYLLPSLMHRLESLMLANQLREEINFCSSNIDIPSSMILE 1090

Query: 427  AMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQLTLYRSKAVCNATLHQL 248
            A+TT+RC E FS ERLELLGDSVLKYAVSC+LF++Y +KHEGQL+  RS AVCN+TLH+L
Sbjct: 1091 ALTTLRCCESFSMERLELLGDSVLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNSTLHKL 1150

Query: 247  AIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRC-----EEMEDKSIEDDEIIVKIGKA 83
                 + GYIRD  FDP +W+APG    R V C+C     E   DK  + ++  VK+GK+
Sbjct: 1151 GTDHKIQGYIRDSAFDPRRWVAPGQRVLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKS 1210

Query: 82   CNKGHRWMTSKTISDGIEALIGAY 11
            C++GHRW+ SKTISD +EALIGAY
Sbjct: 1211 CDRGHRWLCSKTISDCVEALIGAY 1234


>XP_012450061.1 PREDICTED: endoribonuclease Dicer homolog 3 isoform X4 [Gossypium
            raimondii]
          Length = 1686

 Score =  230 bits (586), Expect = 5e-66
 Identities = 113/204 (55%), Positives = 153/204 (75%), Gaps = 6/204 (2%)
 Frame = -3

Query: 604  MEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEINK-NLTFSIPSTLIMQ 428
            + +P EL L L VP  ++++LYL+PS+M+R+ +LMLA+QLR+EIN  +    IPS++I++
Sbjct: 1030 VHMPPELLLVLDVPVSVLKSLYLLPSLMHRLESLMLANQLREEINFCSSNIDIPSSMILE 1089

Query: 427  AMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQLTLYRSKAVCNATLHQL 248
            A+TT+RC E FS ERLELLGDSVLKYAVSC+LF++Y +KHEGQL+  RS AVCN+TLH+L
Sbjct: 1090 ALTTLRCCESFSMERLELLGDSVLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNSTLHKL 1149

Query: 247  AIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRC-----EEMEDKSIEDDEIIVKIGKA 83
                 + GYIRD  FDP +W+APG    R V C+C     E   DK  + ++  VK+GK+
Sbjct: 1150 GTDHKIQGYIRDSAFDPRRWVAPGQRVLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKS 1209

Query: 82   CNKGHRWMTSKTISDGIEALIGAY 11
            C++GHRW+ SKTISD +EALIGAY
Sbjct: 1210 CDRGHRWLCSKTISDCVEALIGAY 1233


>XP_016682324.1 PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 3-like
            [Gossypium hirsutum]
          Length = 1678

 Score =  230 bits (586), Expect = 5e-66
 Identities = 113/204 (55%), Positives = 153/204 (75%), Gaps = 6/204 (2%)
 Frame = -3

Query: 604  MEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEINK-NLTFSIPSTLIMQ 428
            + +P EL L L VP  ++++LYL+PS+M+R+ +LMLA+QLR+EIN  +    IPS++I++
Sbjct: 1035 VHMPPELLLVLDVPVSVLKSLYLLPSLMHRLESLMLANQLREEINFCSSNIDIPSSMILE 1094

Query: 427  AMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQLTLYRSKAVCNATLHQL 248
            A+TT+RC E FS ERLELLGDSVLKYAVSC+LF++Y +KHEGQL+  RS AVCN+TLH+L
Sbjct: 1095 ALTTLRCCESFSMERLELLGDSVLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNSTLHKL 1154

Query: 247  AIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRC-----EEMEDKSIEDDEIIVKIGKA 83
                 + GYIRD  FDP +W+APG    R V C+C     E   DK  + ++  VK+GK+
Sbjct: 1155 GTDHKIQGYIRDSAFDPRRWVAPGQRVLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKS 1214

Query: 82   CNKGHRWMTSKTISDGIEALIGAY 11
            C++GHRW+ SKTISD +EALIGAY
Sbjct: 1215 CDRGHRWLCSKTISDCVEALIGAY 1238


>XP_012450062.1 PREDICTED: endoribonuclease Dicer homolog 3 isoform X5 [Gossypium
            raimondii]
          Length = 1677

 Score =  230 bits (586), Expect = 5e-66
 Identities = 113/204 (55%), Positives = 153/204 (75%), Gaps = 6/204 (2%)
 Frame = -3

Query: 604  MEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEINK-NLTFSIPSTLIMQ 428
            + +P EL L L VP  ++++LYL+PS+M+R+ +LMLA+QLR+EIN  +    IPS++I++
Sbjct: 1034 VHMPPELLLVLDVPVSVLKSLYLLPSLMHRLESLMLANQLREEINFCSSNIDIPSSMILE 1093

Query: 427  AMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQLTLYRSKAVCNATLHQL 248
            A+TT+RC E FS ERLELLGDSVLKYAVSC+LF++Y +KHEGQL+  RS AVCN+TLH+L
Sbjct: 1094 ALTTLRCCESFSMERLELLGDSVLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNSTLHKL 1153

Query: 247  AIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRC-----EEMEDKSIEDDEIIVKIGKA 83
                 + GYIRD  FDP +W+APG    R V C+C     E   DK  + ++  VK+GK+
Sbjct: 1154 GTDHKIQGYIRDSAFDPRRWVAPGQRVLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKS 1213

Query: 82   CNKGHRWMTSKTISDGIEALIGAY 11
            C++GHRW+ SKTISD +EALIGAY
Sbjct: 1214 CDRGHRWLCSKTISDCVEALIGAY 1237


>KJB65396.1 hypothetical protein B456_010G093100 [Gossypium raimondii]
          Length = 1675

 Score =  230 bits (586), Expect = 5e-66
 Identities = 113/204 (55%), Positives = 153/204 (75%), Gaps = 6/204 (2%)
 Frame = -3

Query: 604  MEIPAELCLNLGVPNCIVRTLYLVPSIMYRITNLMLASQLRQEINK-NLTFSIPSTLIMQ 428
            + +P EL L L VP  ++++LYL+PS+M+R+ +LMLA+QLR+EIN  +    IPS++I++
Sbjct: 1032 VHMPPELLLVLDVPVSVLKSLYLLPSLMHRLESLMLANQLREEINFCSSNIDIPSSMILE 1091

Query: 427  AMTTMRCSEIFSSERLELLGDSVLKYAVSCYLFVKYSDKHEGQLTLYRSKAVCNATLHQL 248
            A+TT+RC E FS ERLELLGDSVLKYAVSC+LF++Y +KHEGQL+  RS AVCN+TLH+L
Sbjct: 1092 ALTTLRCCESFSMERLELLGDSVLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNSTLHKL 1151

Query: 247  AIHKNLPGYIRDEPFDPLKWIAPGTYCTRVVECRC-----EEMEDKSIEDDEIIVKIGKA 83
                 + GYIRD  FDP +W+APG    R V C+C     E   DK  + ++  VK+GK+
Sbjct: 1152 GTDHKIQGYIRDSAFDPRRWVAPGQRVLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKS 1211

Query: 82   CNKGHRWMTSKTISDGIEALIGAY 11
            C++GHRW+ SKTISD +EALIGAY
Sbjct: 1212 CDRGHRWLCSKTISDCVEALIGAY 1235