BLASTX nr result
ID: Ephedra29_contig00024160
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00024160
(370 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006367476.1 PREDICTED: RNA polymerase II subunit 5-mediating ... 97 1e-21
XP_015160931.1 PREDICTED: RNA polymerase II subunit 5-mediating ... 97 2e-21
XP_019079284.1 PREDICTED: RNA polymerase II subunit 5-mediating ... 97 2e-21
XP_010656984.1 PREDICTED: RNA polymerase II subunit 5-mediating ... 97 2e-21
XP_010323742.1 PREDICTED: RNA polymerase II subunit 5-mediating ... 97 2e-21
XP_004243363.1 PREDICTED: RNA polymerase II subunit 5-mediating ... 97 2e-21
BAH91449.1 Os01g0928300 [Oryza sativa Japonica Group] BAS76012.1... 91 4e-21
JAT41586.1 RNA polymerase II subunit 5-mediating, partial [Anthu... 96 5e-21
XP_015082642.1 PREDICTED: RNA polymerase II subunit 5-mediating ... 96 5e-21
XP_015082641.1 PREDICTED: RNA polymerase II subunit 5-mediating ... 96 6e-21
KDP24109.1 hypothetical protein JCGZ_25766 [Jatropha curcas] 92 9e-21
XP_016177345.1 PREDICTED: RNA polymerase II subunit 5-mediating ... 92 9e-21
XP_008448308.1 PREDICTED: RNA polymerase II subunit 5-mediating ... 94 2e-20
XP_016900539.1 PREDICTED: RNA polymerase II subunit 5-mediating ... 94 2e-20
OAY67850.1 RNA polymerase II subunit 5-mediating protein, partia... 93 2e-20
XP_011081367.1 PREDICTED: RNA polymerase II subunit 5-mediating ... 92 4e-20
XP_011081366.1 PREDICTED: RNA polymerase II subunit 5-mediating ... 92 6e-20
XP_020087107.1 RNA polymerase II subunit 5-mediating protein hom... 93 6e-20
XP_010923721.1 PREDICTED: RNA polymerase II subunit 5-mediating ... 92 7e-20
XP_010052068.1 PREDICTED: RNA polymerase II subunit 5-mediating ... 93 7e-20
>XP_006367476.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X2 [Solanum tuberosum]
Length = 355
Score = 97.1 bits (240), Expect = 1e-21
Identities = 44/80 (55%), Positives = 64/80 (80%)
Frame = -1
Query: 241 MGERPRGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLP 62
M E +GTVT +S++FP EA+KAA+RVEE + +++LD+L++F+ +N L+KL+Q+LP
Sbjct: 1 MAESVKGTVTSLSSLFPVEEAQKAAKRVEETISERQKQLDQLRDFTADNNTLIKLVQRLP 60
Query: 61 DEVSHKIMVPFGPAAFFPGK 2
DE+ H IMVPFG AAFFPG+
Sbjct: 61 DELHHDIMVPFGKAAFFPGR 80
>XP_015160931.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X1 [Solanum tuberosum]
Length = 360
Score = 97.1 bits (240), Expect = 2e-21
Identities = 44/80 (55%), Positives = 64/80 (80%)
Frame = -1
Query: 241 MGERPRGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLP 62
M E +GTVT +S++FP EA+KAA+RVEE + +++LD+L++F+ +N L+KL+Q+LP
Sbjct: 1 MAESVKGTVTSLSSLFPVEEAQKAAKRVEETISERQKQLDQLRDFTADNNTLIKLVQRLP 60
Query: 61 DEVSHKIMVPFGPAAFFPGK 2
DE+ H IMVPFG AAFFPG+
Sbjct: 61 DELHHDIMVPFGKAAFFPGR 80
>XP_019079284.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X2 [Vitis vinifera]
Length = 381
Score = 97.1 bits (240), Expect = 2e-21
Identities = 45/80 (56%), Positives = 63/80 (78%)
Frame = -1
Query: 241 MGERPRGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLP 62
M E +GTVTP++++FPP EA+KA++RV++AL + ELD+LQ F +N L+ L+Q+LP
Sbjct: 1 MQEPVKGTVTPLASLFPPEEAQKASKRVQDALADRQSELDRLQGFIADNTALVNLVQRLP 60
Query: 61 DEVSHKIMVPFGPAAFFPGK 2
DE+ H IMVPFG AAFFPG+
Sbjct: 61 DELHHDIMVPFGKAAFFPGR 80
>XP_010656984.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X1 [Vitis vinifera]
Length = 385
Score = 97.1 bits (240), Expect = 2e-21
Identities = 45/80 (56%), Positives = 63/80 (78%)
Frame = -1
Query: 241 MGERPRGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLP 62
M E +GTVTP++++FPP EA+KA++RV++AL + ELD+LQ F +N L+ L+Q+LP
Sbjct: 1 MQEPVKGTVTPLASLFPPEEAQKASKRVQDALADRQSELDRLQGFIADNTALVNLVQRLP 60
Query: 61 DEVSHKIMVPFGPAAFFPGK 2
DE+ H IMVPFG AAFFPG+
Sbjct: 61 DELHHDIMVPFGKAAFFPGR 80
>XP_010323742.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X2 [Solanum lycopersicum]
Length = 354
Score = 96.7 bits (239), Expect = 2e-21
Identities = 43/80 (53%), Positives = 65/80 (81%)
Frame = -1
Query: 241 MGERPRGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLP 62
M E +GTVT +S++FP EA+KAA+RVEE + +++LD+L++F+++N L++L+Q+LP
Sbjct: 1 MAESVKGTVTSLSSLFPVEEAQKAAKRVEEIISERQKQLDQLRDFADDNNTLIRLVQRLP 60
Query: 61 DEVSHKIMVPFGPAAFFPGK 2
DE+ H IMVPFG AAFFPG+
Sbjct: 61 DELHHDIMVPFGKAAFFPGR 80
>XP_004243363.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X1 [Solanum lycopersicum]
Length = 359
Score = 96.7 bits (239), Expect = 2e-21
Identities = 43/80 (53%), Positives = 65/80 (81%)
Frame = -1
Query: 241 MGERPRGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLP 62
M E +GTVT +S++FP EA+KAA+RVEE + +++LD+L++F+++N L++L+Q+LP
Sbjct: 1 MAESVKGTVTSLSSLFPVEEAQKAAKRVEEIISERQKQLDQLRDFADDNNTLIRLVQRLP 60
Query: 61 DEVSHKIMVPFGPAAFFPGK 2
DE+ H IMVPFG AAFFPG+
Sbjct: 61 DELHHDIMVPFGKAAFFPGR 80
>BAH91449.1 Os01g0928300 [Oryza sativa Japonica Group] BAS76012.1 Os01g0928300
[Oryza sativa Japonica Group]
Length = 119
Score = 90.5 bits (223), Expect = 4e-21
Identities = 44/75 (58%), Positives = 54/75 (72%)
Frame = -1
Query: 226 RGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLPDEVSH 47
+GT TP+ VF P E R+A RV EA+ R EL +LQ FS +N L+ L+Q+LPDEVSH
Sbjct: 7 KGTATPLGAVFSPEETRRAVARVAEAVADRRAELGRLQGFSADNAALVSLVQRLPDEVSH 66
Query: 46 KIMVPFGPAAFFPGK 2
IMVPFG AAFFPG+
Sbjct: 67 DIMVPFGGAAFFPGR 81
>JAT41586.1 RNA polymerase II subunit 5-mediating, partial [Anthurium amnicola]
JAT45018.1 RNA polymerase II subunit 5-mediating,
partial [Anthurium amnicola]
Length = 422
Score = 96.3 bits (238), Expect = 5e-21
Identities = 42/80 (52%), Positives = 67/80 (83%)
Frame = -1
Query: 241 MGERPRGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLP 62
M ++ +G+VTP++++FP EA+KAA+RV++A+ +QEL++L+ F+++N L+ L+Q+LP
Sbjct: 45 MADQVKGSVTPLASMFPAEEAQKAAKRVQDAIAERQQELERLRLFASDNTGLINLVQRLP 104
Query: 61 DEVSHKIMVPFGPAAFFPGK 2
DE+SH IMVPFG AAFFPG+
Sbjct: 105 DELSHDIMVPFGKAAFFPGR 124
>XP_015082642.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X2 [Solanum pennellii]
Length = 354
Score = 95.5 bits (236), Expect = 5e-21
Identities = 43/80 (53%), Positives = 64/80 (80%)
Frame = -1
Query: 241 MGERPRGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLP 62
M E +GTVT +S++FP EA+KAA+RVEE + +++LD+L++F+ +N L++L+Q+LP
Sbjct: 1 MAESVKGTVTSLSSLFPVEEAQKAAKRVEEIISERQKQLDQLRDFAADNNTLIRLVQRLP 60
Query: 61 DEVSHKIMVPFGPAAFFPGK 2
DE+ H IMVPFG AAFFPG+
Sbjct: 61 DELHHDIMVPFGKAAFFPGR 80
>XP_015082641.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X1 [Solanum pennellii]
Length = 359
Score = 95.5 bits (236), Expect = 6e-21
Identities = 43/80 (53%), Positives = 64/80 (80%)
Frame = -1
Query: 241 MGERPRGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLP 62
M E +GTVT +S++FP EA+KAA+RVEE + +++LD+L++F+ +N L++L+Q+LP
Sbjct: 1 MAESVKGTVTSLSSLFPVEEAQKAAKRVEEIISERQKQLDQLRDFAADNNTLIRLVQRLP 60
Query: 61 DEVSHKIMVPFGPAAFFPGK 2
DE+ H IMVPFG AAFFPG+
Sbjct: 61 DELHHDIMVPFGKAAFFPGR 80
>KDP24109.1 hypothetical protein JCGZ_25766 [Jatropha curcas]
Length = 185
Score = 91.7 bits (226), Expect = 9e-21
Identities = 42/80 (52%), Positives = 61/80 (76%)
Frame = -1
Query: 241 MGERPRGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLP 62
M E+ +GTVT +S++FP EA+KAA+RVE+ + ++ELD L+EF +N L+ L+ +LP
Sbjct: 1 MEEQTKGTVTSLSSMFPVDEAQKAAKRVEDTVAEKQKELDDLKEFIADNTNLINLVSRLP 60
Query: 61 DEVSHKIMVPFGPAAFFPGK 2
DE+ H +MVPFG AAFFPG+
Sbjct: 61 DELHHDVMVPFGKAAFFPGR 80
>XP_016177345.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
[Arachis ipaensis] XP_016177346.1 PREDICTED: RNA
polymerase II subunit 5-mediating protein homolog
[Arachis ipaensis]
Length = 216
Score = 92.4 bits (228), Expect = 9e-21
Identities = 44/80 (55%), Positives = 60/80 (75%)
Frame = -1
Query: 241 MGERPRGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLP 62
M E RGTVT ++++FP EA+KAA RV+ A+ R ELD+L F+++N L+ L+ KLP
Sbjct: 1 MEETRRGTVTSLASLFPVEEAQKAANRVQYAIAEKRAELDRLLGFADDNNNLINLVHKLP 60
Query: 61 DEVSHKIMVPFGPAAFFPGK 2
+E+SH IMVPFG AAFFPG+
Sbjct: 61 EELSHDIMVPFGKAAFFPGR 80
>XP_008448308.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X2 [Cucumis melo]
Length = 374
Score = 94.4 bits (233), Expect = 2e-20
Identities = 41/77 (53%), Positives = 62/77 (80%)
Frame = -1
Query: 232 RPRGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLPDEV 53
R +GTVTP+S++FP +ARKAA RV+ A+ +++L++LQ F +N ++KL+QKLP+E+
Sbjct: 5 RVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEEL 64
Query: 52 SHKIMVPFGPAAFFPGK 2
H++MVPFG AAFFPG+
Sbjct: 65 HHEVMVPFGKAAFFPGR 81
>XP_016900539.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X1 [Cucumis melo]
Length = 375
Score = 94.4 bits (233), Expect = 2e-20
Identities = 41/77 (53%), Positives = 62/77 (80%)
Frame = -1
Query: 232 RPRGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLPDEV 53
R +GTVTP+S++FP +ARKAA RV+ A+ +++L++LQ F +N ++KL+QKLP+E+
Sbjct: 5 RVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKLPEEL 64
Query: 52 SHKIMVPFGPAAFFPGK 2
H++MVPFG AAFFPG+
Sbjct: 65 HHEVMVPFGKAAFFPGR 81
>OAY67850.1 RNA polymerase II subunit 5-mediating protein, partial [Ananas
comosus]
Length = 315
Score = 93.2 bits (230), Expect = 2e-20
Identities = 45/80 (56%), Positives = 60/80 (75%)
Frame = -1
Query: 241 MGERPRGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLP 62
MG+ +GTVT + +FP EA +AA+RVEEA+ R EL +L+ F+ +N L+ L+QKLP
Sbjct: 1 MGDGAKGTVTSLDALFPAKEASRAARRVEEAISERRGELRRLRGFAADNAALVSLVQKLP 60
Query: 61 DEVSHKIMVPFGPAAFFPGK 2
DE+SH IMVPFG AAFFPG+
Sbjct: 61 DELSHDIMVPFGGAAFFPGR 80
>XP_011081367.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X2 [Sesamum indicum]
Length = 299
Score = 92.4 bits (228), Expect = 4e-20
Identities = 42/74 (56%), Positives = 59/74 (79%)
Frame = -1
Query: 223 GTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLPDEVSHK 44
GTVTPIS+VFP EA+KA++RV++ + +Q+LD+L+ F ++N ++ L+QKLPDE H
Sbjct: 5 GTVTPISSVFPAEEAQKASRRVQDTIAERQQQLDQLKGFIDDNISVINLVQKLPDETHHN 64
Query: 43 IMVPFGPAAFFPGK 2
IMVPFG AAFFPG+
Sbjct: 65 IMVPFGKAAFFPGR 78
>XP_011081366.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X1 [Sesamum indicum] XP_011081368.1 PREDICTED:
RNA polymerase II subunit 5-mediating protein homolog
isoform X1 [Sesamum indicum]
Length = 331
Score = 92.4 bits (228), Expect = 6e-20
Identities = 42/74 (56%), Positives = 59/74 (79%)
Frame = -1
Query: 223 GTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLPDEVSHK 44
GTVTPIS+VFP EA+KA++RV++ + +Q+LD+L+ F ++N ++ L+QKLPDE H
Sbjct: 5 GTVTPISSVFPAEEAQKASRRVQDTIAERQQQLDQLKGFIDDNISVINLVQKLPDETHHN 64
Query: 43 IMVPFGPAAFFPGK 2
IMVPFG AAFFPG+
Sbjct: 65 IMVPFGKAAFFPGR 78
>XP_020087107.1 RNA polymerase II subunit 5-mediating protein homolog [Ananas
comosus]
Length = 407
Score = 93.2 bits (230), Expect = 6e-20
Identities = 45/80 (56%), Positives = 60/80 (75%)
Frame = -1
Query: 241 MGERPRGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLP 62
MG+ +GTVT + +FP EA +AA+RVEEA+ R EL +L+ F+ +N L+ L+QKLP
Sbjct: 1 MGDGAKGTVTSLDALFPAKEASRAARRVEEAISERRGELRRLRGFAADNAALVSLVQKLP 60
Query: 61 DEVSHKIMVPFGPAAFFPGK 2
DE+SH IMVPFG AAFFPG+
Sbjct: 61 DELSHDIMVPFGGAAFFPGR 80
>XP_010923721.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
[Elaeis guineensis]
Length = 346
Score = 92.4 bits (228), Expect = 7e-20
Identities = 43/80 (53%), Positives = 62/80 (77%)
Frame = -1
Query: 241 MGERPRGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLP 62
MG+ +GT+T + ++F P EA KAA+RVE+A+ R+ELD+L+ F ++N L+ L++KLP
Sbjct: 1 MGDTAKGTITSLDSLFSPEEAWKAARRVEDAIADRRKELDRLRGFLSDNSALIHLVRKLP 60
Query: 61 DEVSHKIMVPFGPAAFFPGK 2
DE+SH IMVPFG AAF PG+
Sbjct: 61 DELSHDIMVPFGSAAFSPGR 80
>XP_010052068.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
isoform X1 [Eucalyptus grandis] KCW89546.1 hypothetical
protein EUGRSUZ_A01831 [Eucalyptus grandis]
Length = 383
Score = 92.8 bits (229), Expect = 7e-20
Identities = 42/80 (52%), Positives = 62/80 (77%)
Frame = -1
Query: 241 MGERPRGTVTPISNVFPPAEARKAAQRVEEALQVPRQELDKLQEFSNENRELMKLIQKLP 62
M E GTVTP++++FP EA+KAA RV++A+ R+ELD+++ F+ +N L+ L+QKLP
Sbjct: 1 MEEGANGTVTPLASMFPADEAQKAAGRVQDAIAEKRRELDRVRGFAADNAALVNLVQKLP 60
Query: 61 DEVSHKIMVPFGPAAFFPGK 2
+E+ H +MVPFG AAFFPG+
Sbjct: 61 EELHHDVMVPFGKAAFFPGR 80