BLASTX nr result
ID: Ephedra29_contig00024067
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00024067
(273 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN73071.1 hypothetical protein VITISV_032383 [Vitis vinifera] 115 5e-28
CAN69607.1 hypothetical protein VITISV_009561 [Vitis vinifera] 115 7e-28
CAN79884.1 hypothetical protein VITISV_002539 [Vitis vinifera] 114 1e-27
CBI36090.3 unnamed protein product, partial [Vitis vinifera] 112 8e-27
CAN60277.1 hypothetical protein VITISV_028254 [Vitis vinifera] 107 5e-26
CAN78022.1 hypothetical protein VITISV_015518 [Vitis vinifera] 98 8e-22
KYP72965.1 Retrovirus-related Pol polyprotein from transposon TN... 91 2e-20
KYP64614.1 Retrovirus-related Pol polyprotein from transposon TN... 91 2e-19
KYP54064.1 Retrovirus-related Pol polyprotein from transposon TN... 90 5e-19
KYP43751.1 Retrovirus-related Pol polyprotein from transposon TN... 89 6e-19
KYP48069.1 Retrovirus-related Pol polyprotein from transposon TN... 85 3e-18
KYP72921.1 hypothetical protein KK1_005526, partial [Cajanus cajan] 82 9e-18
KYP63355.1 Retrovirus-related Pol polyprotein from transposon TN... 82 2e-16
CAN76630.1 hypothetical protein VITISV_032334 [Vitis vinifera] 72 9e-13
CAN71258.1 hypothetical protein VITISV_043225 [Vitis vinifera] 63 2e-09
XP_016495424.1 PREDICTED: uncharacterized protein LOC107814507 [... 60 8e-09
XP_013725106.1 PREDICTED: uncharacterized protein LOC106428899 [... 60 2e-08
OMO61427.1 Zinc finger, CCCH-type [Corchorus capsularis] 59 5e-08
AAD21687.1 Strong similarity to gi|3600044 T12H20.12 protease ho... 58 7e-08
OAP02304.1 hypothetical protein AXX17_AT3G39340 [Arabidopsis tha... 57 2e-07
>CAN73071.1 hypothetical protein VITISV_032383 [Vitis vinifera]
Length = 1239
Score = 115 bits (288), Expect = 5e-28
Identities = 54/90 (60%), Positives = 70/90 (77%)
Frame = -3
Query: 271 RSVATGWHENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLC 92
R VATG + GLYVLE G+ + IS+L N R S+D+WHARLGHV++S+IS LNK L
Sbjct: 393 RVVATGKRDGGLYVLECGNSAFISVLKNKSLRASYDLWHARLGHVNYSVISFLNKKGHLS 452
Query: 91 VTSLLPTPTICSSCQLAKSHRLSFQRNEKR 2
+TSLLP+P++CS+CQLAK+HRL + RNE R
Sbjct: 453 LTSLLPSPSLCSTCQLAKNHRLPYSRNEHR 482
>CAN69607.1 hypothetical protein VITISV_009561 [Vitis vinifera]
Length = 1207
Score = 115 bits (287), Expect = 7e-28
Identities = 53/90 (58%), Positives = 69/90 (76%)
Frame = -3
Query: 271 RSVATGWHENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLC 92
R VATG + GLYVLER + + IS+L N R S+D+WHARLGHV++S+IS LNK L
Sbjct: 355 RVVATGKRDGGLYVLERDNSAFISVLKNKSLRASYDLWHARLGHVNYSVISFLNKKXQLS 414
Query: 91 VTSLLPTPTICSSCQLAKSHRLSFQRNEKR 2
+TSLLP+P++CS+CQ AK+HRL + RNE R
Sbjct: 415 LTSLLPSPSLCSTCQFAKNHRLPYSRNEHR 444
>CAN79884.1 hypothetical protein VITISV_002539 [Vitis vinifera]
Length = 1453
Score = 114 bits (285), Expect = 1e-27
Identities = 55/89 (61%), Positives = 66/89 (74%)
Frame = -3
Query: 268 SVATGWHENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLCV 89
+VA G GLYVLERGH + S+L N SF++WHARLGHV+HSI+SLLNK L +
Sbjct: 376 AVAKGKRAGGLYVLERGHSAFASVLRNKNLHASFELWHARLGHVNHSILSLLNKKGQLFL 435
Query: 88 TSLLPTPTICSSCQLAKSHRLSFQRNEKR 2
TSLLPTP++CS+CQLAKSHRL F N R
Sbjct: 436 TSLLPTPSLCSTCQLAKSHRLPFSSNTTR 464
>CBI36090.3 unnamed protein product, partial [Vitis vinifera]
Length = 1273
Score = 112 bits (279), Expect = 8e-27
Identities = 52/90 (57%), Positives = 69/90 (76%)
Frame = -3
Query: 271 RSVATGWHENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLC 92
R VATG + GLYVLERG+ + IS+L N R S+D+WHARLGHV++ +IS L+K L
Sbjct: 969 RVVATGKRDGGLYVLERGNSAFISVLKNKSLRASYDLWHARLGHVNYFVISFLHKKGHLS 1028
Query: 91 VTSLLPTPTICSSCQLAKSHRLSFQRNEKR 2
+ SLLP+P++CS+CQLAK+HRL + RNE R
Sbjct: 1029 LMSLLPSPSLCSTCQLAKNHRLPYSRNEHR 1058
>CAN60277.1 hypothetical protein VITISV_028254 [Vitis vinifera]
Length = 372
Score = 107 bits (268), Expect = 5e-26
Identities = 50/90 (55%), Positives = 65/90 (72%)
Frame = -3
Query: 271 RSVATGWHENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLC 92
R V TG ++GLYVLE G+ I +L N S+D+WHA LGHVSHS+ISLLNKN L
Sbjct: 251 RVVETGKRDSGLYVLECGNSXFIFVLKNKALHASYDLWHAHLGHVSHSVISLLNKNGHLY 310
Query: 91 VTSLLPTPTICSSCQLAKSHRLSFQRNEKR 2
TSLL +P++C +CQ+ K+HRL + RNE+R
Sbjct: 311 FTSLLSSPSLCDTCQITKNHRLPYSRNERR 340
>CAN78022.1 hypothetical protein VITISV_015518 [Vitis vinifera]
Length = 1501
Score = 97.8 bits (242), Expect = 8e-22
Identities = 48/90 (53%), Positives = 62/90 (68%)
Frame = -3
Query: 271 RSVATGWHENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLC 92
R VATG + GLYVLERG+ + IS+L N R S+D+WHARLGH+S
Sbjct: 385 RXVATGKRDGGLYVLERGNSAFISVLKNKSLRASYDLWHARLGHLS-------------- 430
Query: 91 VTSLLPTPTICSSCQLAKSHRLSFQRNEKR 2
+TSLLP+P++CS+CQLAK+HRL + RNE R
Sbjct: 431 LTSLLPSPSLCSTCQLAKNHRLPYSRNEHR 460
>KYP72965.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 261
Score = 90.9 bits (224), Expect = 2e-20
Identities = 44/90 (48%), Positives = 65/90 (72%)
Frame = -3
Query: 271 RSVATGWHENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLC 92
R +A G + GLYV+++G Q+L++ S++ PR SF++WH+RLGHV+ +I+ LNK L
Sbjct: 69 RVLARGRCDQGLYVMDQGPQALLTT-SSSLPRASFELWHSRLGHVNFDVINKLNKQGYLN 127
Query: 91 VTSLLPTPTICSSCQLAKSHRLSFQRNEKR 2
V+S+LP P C++CQ+AKS RL F N KR
Sbjct: 128 VSSILPKPICCTTCQMAKSKRLVFYDNNKR 157
>KYP64614.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1291
Score = 90.9 bits (224), Expect = 2e-19
Identities = 44/90 (48%), Positives = 65/90 (72%)
Frame = -3
Query: 271 RSVATGWHENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLC 92
R +A G + GLYV+++G Q+L++ S++ PR SF++WH+RLGHV+ +I+ LNK L
Sbjct: 315 RVLARGRCDQGLYVMDQGPQALLTT-SSSLPRASFELWHSRLGHVNFDVINKLNKQGYLN 373
Query: 91 VTSLLPTPTICSSCQLAKSHRLSFQRNEKR 2
V+S+LP P C++CQ+AKS RL F N KR
Sbjct: 374 VSSILPKPICCTTCQMAKSKRLVFYDNNKR 403
>KYP54064.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1683
Score = 89.7 bits (221), Expect = 5e-19
Identities = 43/90 (47%), Positives = 65/90 (72%)
Frame = -3
Query: 271 RSVATGWHENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLC 92
R +A G + GLYV+++G Q+L++ S++ PR SF++WH+RLGHV+ +I+ LN+ L
Sbjct: 227 RVLARGRCDQGLYVMDQGPQALLTT-SSSLPRASFELWHSRLGHVNFDVINKLNQQGYLN 285
Query: 91 VTSLLPTPTICSSCQLAKSHRLSFQRNEKR 2
V+S+LP P C++CQ+AKS RL F N KR
Sbjct: 286 VSSILPKPVYCTTCQMAKSKRLFFYDNNKR 315
>KYP43751.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 483
Score = 89.4 bits (220), Expect = 6e-19
Identities = 43/90 (47%), Positives = 65/90 (72%)
Frame = -3
Query: 271 RSVATGWHENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLC 92
R +A G + GLYV+++G Q+L++ S++ PR SF++WH+RLGHV+ +I+ LN+ L
Sbjct: 350 RVLARGRCDQGLYVMDQGPQALLTT-SSSLPRASFELWHSRLGHVNFDVINKLNQQGYLN 408
Query: 91 VTSLLPTPTICSSCQLAKSHRLSFQRNEKR 2
V+S+LP P C++CQ+AKS RL F N KR
Sbjct: 409 VSSILPKPICCTTCQMAKSKRLVFYDNNKR 438
>KYP48069.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 229
Score = 84.7 bits (208), Expect = 3e-18
Identities = 39/82 (47%), Positives = 60/82 (73%)
Frame = -3
Query: 247 ENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLCVTSLLPTP 68
+ GLYV+ +G Q+L++ S++ PR SF++WH+RLGHV+ +I+ LN+ L V+S+LP P
Sbjct: 103 DQGLYVMNQGPQALLTT-SSSLPRASFELWHSRLGHVNFDVINKLNQQGYLNVSSILPKP 161
Query: 67 TICSSCQLAKSHRLSFQRNEKR 2
C++C++AKS RL F N KR
Sbjct: 162 ICCTTCEMAKSKRLVFYDNNKR 183
>KYP72921.1 hypothetical protein KK1_005526, partial [Cajanus cajan]
Length = 182
Score = 82.4 bits (202), Expect = 9e-18
Identities = 39/84 (46%), Positives = 61/84 (72%)
Frame = -3
Query: 271 RSVATGWHENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLC 92
R +A G + GLYV+++G Q+L++ S++ PR SF++WH+RLGHV+ +I+ LN+ L
Sbjct: 99 RVLARGRCDQGLYVMDQGPQALLTT-SSSLPRASFELWHSRLGHVNFDVINKLNQQGYLN 157
Query: 91 VTSLLPTPTICSSCQLAKSHRLSF 20
V+S+LP P C++CQ+AKS L F
Sbjct: 158 VSSILPKPICCTTCQMAKSKHLVF 181
>KYP63355.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1040
Score = 82.4 bits (202), Expect = 2e-16
Identities = 40/90 (44%), Positives = 62/90 (68%)
Frame = -3
Query: 271 RSVATGWHENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLC 92
R +A G + GLYV+++G Q+L++ S++ PR F++WH+ LG V+ +I+ LN+ L
Sbjct: 285 RVLARGRCDQGLYVMDQGPQALLTT-SSSLPRACFELWHSSLGRVNFDVINKLNQQGYLN 343
Query: 91 VTSLLPTPTICSSCQLAKSHRLSFQRNEKR 2
V+S+LP P C++CQ+AKS RL F N KR
Sbjct: 344 VSSILPNPIYCTTCQMAKSKRLVFYDNNKR 373
>CAN76630.1 hypothetical protein VITISV_032334 [Vitis vinifera]
Length = 540
Score = 72.0 bits (175), Expect = 9e-13
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = -3
Query: 268 SVATGWHENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLCV 89
++ G ENGLYVL++ H +L+SI+S+N S +WHARLGH S I+ L+K+ +
Sbjct: 417 ALGVGRCENGLYVLDQNHHALVSIVSSNKSCASVPLWHARLGHPSFRTINSLSKSGFISC 476
Query: 88 TSLLP--TPTICSSCQLAKSHRLSFQRNEKR 2
++ L ++C C L K+HRL F N R
Sbjct: 477 SNKLMGLDSSLCVGCNLGKNHRLPFSLNNNR 507
>CAN71258.1 hypothetical protein VITISV_043225 [Vitis vinifera]
Length = 881
Score = 62.8 bits (151), Expect = 2e-09
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = -3
Query: 247 ENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLCVTSLLP-- 74
ENGLYVL++ H +L SI+S+N S +WHARL H S I L+K+ + ++ L
Sbjct: 178 ENGLYVLDQNHHALASIVSSNKSCVSVPLWHARLXHTSFXTIXSLSKSGFISXSNKLMGL 237
Query: 73 TPTICSSCQLAKSHRLSFQRN 11
++C C + KSH L F N
Sbjct: 238 BSSLCVGCNIGKSHXLHFSLN 258
>XP_016495424.1 PREDICTED: uncharacterized protein LOC107814507 [Nicotiana tabacum]
Length = 248
Score = 60.1 bits (144), Expect = 8e-09
Identities = 29/87 (33%), Positives = 48/87 (55%)
Frame = -3
Query: 265 VATGWHENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLCVT 86
+A G G Y L+ + ++ R + +WHARLGH++ ++ L+ N+ + +T
Sbjct: 156 LAIGSKRGGPYALDNNNLKSLTATQ----RSTSSIWHARLGHLNLKLLHFLSNNKRINIT 211
Query: 85 SLLPTPTICSSCQLAKSHRLSFQRNEK 5
TPTIC SCQ+ KS +L F++ K
Sbjct: 212 CWNKTPTICVSCQMGKSCKLPFEQRNK 238
>XP_013725106.1 PREDICTED: uncharacterized protein LOC106428899 [Brassica napus]
Length = 537
Score = 59.7 bits (143), Expect = 2e-08
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = -3
Query: 271 RSVATGWHENGLYVLERGHQSLISILSNN-CPRDSFDVWHARLGHVSHSIISLLNKNRLL 95
R V+ G NGLYVL+ Q L+++ SN C D+ +VWH RLGH ++ I+ L N+ +
Sbjct: 428 RVVSEGPRRNGLYVLKS--QELVAMYSNRQCGADA-EVWHQRLGHSNYQILQHLKNNKEI 484
Query: 94 CVTSLLPTPTICSSCQLAKSHRLSF 20
V P IC CQ+ KS RL F
Sbjct: 485 TVNKSSINP-ICEPCQIGKSSRLQF 508
>OMO61427.1 Zinc finger, CCCH-type [Corchorus capsularis]
Length = 1996
Score = 58.5 bits (140), Expect = 5e-08
Identities = 31/84 (36%), Positives = 45/84 (53%)
Frame = -3
Query: 271 RSVATGWHENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLC 92
+ +A G ++G+Y L G + + S S +VWH RLGH ++ LL KN+L+
Sbjct: 397 KMIAKGSKQDGVYAL--GTKEKAAFFSTRFKTASDEVWHQRLGHPQPKVVELLKKNKLIT 454
Query: 91 VTSLLPTPTICSSCQLAKSHRLSF 20
TS C SCQ+AK+ RL F
Sbjct: 455 STSGNKVEHFCDSCQMAKACRLPF 478
>AAD21687.1 Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 58.2 bits (139), Expect = 7e-08
Identities = 31/88 (35%), Positives = 48/88 (54%)
Frame = -3
Query: 265 VATGWHENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLCVT 86
V TG NGLYVLE +Q +++ SN + +VWH RLGH + + L ++ + +
Sbjct: 423 VTTGPRRNGLYVLE--NQEFVALYSNRQCAATEEVWHHRLGHANSKALQHLQNSKAIQIN 480
Query: 85 SLLPTPTICSSCQLAKSHRLSFQRNEKR 2
+P +C CQ+ KS RL F ++ R
Sbjct: 481 KSRTSP-VCEPCQMGKSSRLPFLISDSR 507
>OAP02304.1 hypothetical protein AXX17_AT3G39340 [Arabidopsis thaliana]
Length = 2099
Score = 57.0 bits (136), Expect = 2e-07
Identities = 33/82 (40%), Positives = 48/82 (58%)
Frame = -3
Query: 265 VATGWHENGLYVLERGHQSLISILSNNCPRDSFDVWHARLGHVSHSIISLLNKNRLLCVT 86
+A G + NGLYVL+ S+ + S+ S DVWH RLGH + I+ LL+KN+ + ++
Sbjct: 547 LAQGNNFNGLYVLK--DSSVHAFYSSRQQTTSEDVWHMRLGHPNQQILQLLHKNKAVNIS 604
Query: 85 SLLPTPTICSSCQLAKSHRLSF 20
+ IC +CQ KS RL F
Sbjct: 605 K--SSKGICEACQYGKSSRLPF 624