BLASTX nr result
ID: Ephedra29_contig00024008
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00024008
(360 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_020108026.1 mediator of RNA polymerase II transcription subun... 83 5e-16
OAY79976.1 Mediator of RNA polymerase II transcription subunit 3... 83 5e-16
XP_020108025.1 mediator of RNA polymerase II transcription subun... 83 5e-16
XP_009384953.1 PREDICTED: mediator of RNA polymerase II transcri... 82 9e-16
KMZ70941.1 hypothetical protein ZOSMA_18G00330, partial [Zostera... 78 2e-14
XP_018675347.1 PREDICTED: mediator of RNA polymerase II transcri... 78 3e-14
XP_009420227.2 PREDICTED: mediator of RNA polymerase II transcri... 78 3e-14
XP_010278698.1 PREDICTED: mediator of RNA polymerase II transcri... 77 5e-14
XP_010113041.1 hypothetical protein L484_022767 [Morus notabilis... 77 5e-14
XP_010278690.1 PREDICTED: mediator of RNA polymerase II transcri... 77 5e-14
ONK67983.1 uncharacterized protein A4U43_C05F5900 [Asparagus off... 77 7e-14
XP_010921239.1 PREDICTED: mediator of RNA polymerase II transcri... 77 7e-14
XP_010921237.1 PREDICTED: mediator of RNA polymerase II transcri... 77 7e-14
XP_013449281.1 mediator of RNA polymerase II transcription subun... 76 9e-14
XP_003623670.1 mediator of RNA polymerase II transcription subun... 76 9e-14
XP_008790995.1 PREDICTED: LOW QUALITY PROTEIN: mediator of RNA p... 76 9e-14
XP_002323105.2 hypothetical protein POPTR_0016s14910g [Populus t... 76 9e-14
EEE67830.1 hypothetical protein OsJ_25606 [Oryza sativa Japonica... 76 1e-13
XP_015647066.1 PREDICTED: mediator of RNA polymerase II transcri... 76 1e-13
XP_009365797.1 PREDICTED: mediator of RNA polymerase II transcri... 76 1e-13
>XP_020108026.1 mediator of RNA polymerase II transcription subunit 33A-like
isoform X2 [Ananas comosus]
Length = 1076
Score = 82.8 bits (203), Expect = 5e-16
Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 6/105 (5%)
Frame = -1
Query: 312 ENKTLESE-----PMQSALQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSG 148
EN+ LE+E + L SSL++L QF++LL PP SV FI + K+G
Sbjct: 194 ENEMLETEGNKVPSRRQGLISSLQVLAQFSSLLSPPPSVINAANSAATKAAVFISNFKTG 253
Query: 147 SEAYDSIGRNFSSSN-VGNLWHLIVEACIARKLVNSSAYLWPSYV 16
S +GRN SS VGN+ HLIVEACIAR L+++SAY WP YV
Sbjct: 254 SGNLGMVGRNDSSPKAVGNMLHLIVEACIARNLLDTSAYFWPGYV 298
>OAY79976.1 Mediator of RNA polymerase II transcription subunit 33A [Ananas
comosus]
Length = 1256
Score = 82.8 bits (203), Expect = 5e-16
Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 6/105 (5%)
Frame = -1
Query: 312 ENKTLESE-----PMQSALQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSG 148
EN+ LE+E + L SSL++L QF++LL PP SV FI + K+G
Sbjct: 374 ENEMLETEGNKVPSRRQGLISSLQVLAQFSSLLSPPPSVINAANSAATKAAVFISNFKTG 433
Query: 147 SEAYDSIGRNFSSSN-VGNLWHLIVEACIARKLVNSSAYLWPSYV 16
S +GRN SS VGN+ HLIVEACIAR L+++SAY WP YV
Sbjct: 434 SGNLGMVGRNDSSPKAVGNMLHLIVEACIARNLLDTSAYFWPGYV 478
>XP_020108025.1 mediator of RNA polymerase II transcription subunit 33A-like
isoform X1 [Ananas comosus]
Length = 1304
Score = 82.8 bits (203), Expect = 5e-16
Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 6/105 (5%)
Frame = -1
Query: 312 ENKTLESE-----PMQSALQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSG 148
EN+ LE+E + L SSL++L QF++LL PP SV FI + K+G
Sbjct: 422 ENEMLETEGNKVPSRRQGLISSLQVLAQFSSLLSPPPSVINAANSAATKAAVFISNFKTG 481
Query: 147 SEAYDSIGRNFSSSN-VGNLWHLIVEACIARKLVNSSAYLWPSYV 16
S +GRN SS VGN+ HLIVEACIAR L+++SAY WP YV
Sbjct: 482 SGNLGMVGRNDSSPKAVGNMLHLIVEACIARNLLDTSAYFWPGYV 526
>XP_009384953.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Musa acuminata subsp. malaccensis]
Length = 1330
Score = 82.0 bits (201), Expect = 9e-16
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Frame = -1
Query: 312 ENKTLESEPMQSALQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSGSEAYD 133
EN+ + + L SSLK+LGQF+ LL+PP SV F+ + K+G+ +
Sbjct: 439 ENEGNKFSSRRHGLISSLKMLGQFSALLLPPPSVVNAANNAATKAAVFVSNYKAGNNNLN 498
Query: 132 SIGRNFSSSN-VGNLWHLIVEACIARKLVNSSAYLWPSYV 16
+G N SS VGN+ HLIVEACIAR L+++SAY WP YV
Sbjct: 499 VVGHNDSSIKAVGNMLHLIVEACIARNLIDTSAYFWPGYV 538
>KMZ70941.1 hypothetical protein ZOSMA_18G00330, partial [Zostera marina]
Length = 563
Score = 77.8 bits (190), Expect = 2e-14
Identities = 42/104 (40%), Positives = 59/104 (56%)
Frame = -1
Query: 327 HIHNVENKTLESEPMQSALQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSG 148
+I +++ L+ E AL SL++LG + +LLVPP S F+
Sbjct: 424 NISQLQDTVLQGE-RHRALVHSLQLLGNYESLLVPPPSFIYVANQAAAKALAFVSGIPIS 482
Query: 147 SEAYDSIGRNFSSSNVGNLWHLIVEACIARKLVNSSAYLWPSYV 16
++SIG N + GN+WHLIVEACIAR L+++SAYLWP YV
Sbjct: 483 VGFFESIGTNNKLNCSGNMWHLIVEACIARNLLDTSAYLWPGYV 526
>XP_018675347.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Musa acuminata subsp. malaccensis]
Length = 1067
Score = 77.8 bits (190), Expect = 3e-14
Identities = 43/87 (49%), Positives = 53/87 (60%)
Frame = -1
Query: 276 ALQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSGSEAYDSIGRNFSSSNVG 97
AL SSLKILGQF+ LL PP SV F+Y+ K+G+ + S VG
Sbjct: 489 ALISSLKILGQFSALLSPPPSVVNVANSAATKAAVFVYNFKAGNSNLNDC----SIKAVG 544
Query: 96 NLWHLIVEACIARKLVNSSAYLWPSYV 16
N+ HLIVEACIAR L+++SAY WP YV
Sbjct: 545 NMLHLIVEACIARNLIDTSAYFWPGYV 571
>XP_009420227.2 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Musa acuminata subsp. malaccensis]
Length = 1362
Score = 77.8 bits (190), Expect = 3e-14
Identities = 43/87 (49%), Positives = 53/87 (60%)
Frame = -1
Query: 276 ALQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSGSEAYDSIGRNFSSSNVG 97
AL SSLKILGQF+ LL PP SV F+Y+ K+G+ + S VG
Sbjct: 489 ALISSLKILGQFSALLSPPPSVVNVANSAATKAAVFVYNFKAGNSNLNDC----SIKAVG 544
Query: 96 NLWHLIVEACIARKLVNSSAYLWPSYV 16
N+ HLIVEACIAR L+++SAY WP YV
Sbjct: 545 NMLHLIVEACIARNLIDTSAYFWPGYV 571
>XP_010278698.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X2 [Nelumbo nucifera]
Length = 1290
Score = 77.0 bits (188), Expect = 5e-14
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = -1
Query: 273 LQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSGSEAYDSIGRN-FSSSNVG 97
L SSL+ILG + LL PPQSV F+ + GS ++ I ++ S G
Sbjct: 407 LVSSLQILGDYEGLLTPPQSVISVANQAAMKAMMFVSGATVGSGYFECISKSDMPMSCFG 466
Query: 96 NLWHLIVEACIARKLVNSSAYLWPSYV*R 10
N+WHLIVEACIAR L+++SAY WP YV R
Sbjct: 467 NMWHLIVEACIARDLLDTSAYFWPGYVNR 495
>XP_010113041.1 hypothetical protein L484_022767 [Morus notabilis] EXC35212.1
hypothetical protein L484_022767 [Morus notabilis]
Length = 1321
Score = 77.0 bits (188), Expect = 5e-14
Identities = 45/106 (42%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Frame = -1
Query: 327 HIHNVENKTLESEPMQSALQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSG 148
H H + KT P + L SSL +LGQF LL PP SV +F+++S++
Sbjct: 433 HGHGMSGKT--RVPRKHGLISSLHVLGQFPALLCPPPSVVGAANVAVTKAARFVHNSRNE 490
Query: 147 SEA--YDSIGRNFSSSNVGNLWHLIVEACIARKLVNSSAYLWPSYV 16
+ Y S G+ F +S GN+ HLIVEACIAR +++SAY WP YV
Sbjct: 491 KDRVDYGSNGQGFINSG-GNMRHLIVEACIARNFIDTSAYFWPGYV 535
>XP_010278690.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X1 [Nelumbo nucifera]
Length = 1327
Score = 77.0 bits (188), Expect = 5e-14
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = -1
Query: 273 LQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSGSEAYDSIGRN-FSSSNVG 97
L SSL+ILG + LL PPQSV F+ + GS ++ I ++ S G
Sbjct: 444 LVSSLQILGDYEGLLTPPQSVISVANQAAMKAMMFVSGATVGSGYFECISKSDMPMSCFG 503
Query: 96 NLWHLIVEACIARKLVNSSAYLWPSYV*R 10
N+WHLIVEACIAR L+++SAY WP YV R
Sbjct: 504 NMWHLIVEACIARDLLDTSAYFWPGYVNR 532
>ONK67983.1 uncharacterized protein A4U43_C05F5900 [Asparagus officinalis]
Length = 1020
Score = 76.6 bits (187), Expect = 7e-14
Identities = 45/103 (43%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Frame = -1
Query: 321 HNVENKTLESEPMQSALQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSGSE 142
H++E K S + L +L++LGQF+ LL PP F+ KSGS
Sbjct: 440 HDMEGKKYPSR--RQGLVFALQVLGQFSVLLSPPAPAVTAANIAASKAATFVSKFKSGST 497
Query: 141 AYDSIGRNFSSSN-VGNLWHLIVEACIARKLVNSSAYLWPSYV 16
+I N SS VG L HLIVEACIARKL++SSAY WP Y+
Sbjct: 498 NLSAISHNDSSVKAVGTLLHLIVEACIARKLIDSSAYFWPGYI 540
>XP_010921239.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Elaeis guineensis]
Length = 1331
Score = 76.6 bits (187), Expect = 7e-14
Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = -1
Query: 273 LQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSGSEAYDSIGRNFSSSN-VG 97
L SSL++LGQF+ LL PP SV FI + K+GS RN SS VG
Sbjct: 454 LISSLQVLGQFSGLLSPPPSVVNAANSAASKAATFISNLKTGSGNLGVPNRNDSSVKAVG 513
Query: 96 NLWHLIVEACIARKLVNSSAYLWPSYV 16
N+ HLIVEACIAR L+++SAY WP YV
Sbjct: 514 NMLHLIVEACIARNLIDTSAYFWPGYV 540
>XP_010921237.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Elaeis guineensis]
Length = 1352
Score = 76.6 bits (187), Expect = 7e-14
Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = -1
Query: 273 LQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSGSEAYDSIGRNFSSSN-VG 97
L SSL++LGQF+ LL PP SV FI + K+GS RN SS VG
Sbjct: 454 LISSLQVLGQFSGLLSPPPSVVNAANSAASKAATFISNLKTGSGNLGVPNRNDSSVKAVG 513
Query: 96 NLWHLIVEACIARKLVNSSAYLWPSYV 16
N+ HLIVEACIAR L+++SAY WP YV
Sbjct: 514 NMLHLIVEACIARNLIDTSAYFWPGYV 540
>XP_013449281.1 mediator of RNA polymerase II transcription subunit 33A [Medicago
truncatula] KEH23308.1 mediator of RNA polymerase II
transcription subunit 33A [Medicago truncatula]
Length = 992
Score = 76.3 bits (186), Expect = 9e-14
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Frame = -1
Query: 285 MQSALQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSS-KSGSEAYDSIGRNFSS 109
M+ L SS+++LG F+ LL PP V FIY+S K E + SI N +S
Sbjct: 111 MKLGLISSVQVLGHFSGLLCPPALVVDAANQAARKASSFIYNSMKEKGEPFTSINANANS 170
Query: 108 SNVGNLWHLIVEACIARKLVNSSAYLWPSYV 16
+ GNL HLIVEACIAR L+++S Y WP YV
Sbjct: 171 NAGGNLRHLIVEACIARNLMDTSVYFWPGYV 201
>XP_003623670.1 mediator of RNA polymerase II transcription subunit 33A [Medicago
truncatula] AES79888.1 mediator of RNA polymerase II
transcription subunit 33A [Medicago truncatula]
Length = 1320
Score = 76.3 bits (186), Expect = 9e-14
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Frame = -1
Query: 285 MQSALQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSS-KSGSEAYDSIGRNFSS 109
M+ L SS+++LG F+ LL PP V FIY+S K E + SI N +S
Sbjct: 439 MKLGLISSVQVLGHFSGLLCPPALVVDAANQAARKASSFIYNSMKEKGEPFTSINANANS 498
Query: 108 SNVGNLWHLIVEACIARKLVNSSAYLWPSYV 16
+ GNL HLIVEACIAR L+++S Y WP YV
Sbjct: 499 NAGGNLRHLIVEACIARNLMDTSVYFWPGYV 529
>XP_008790995.1 PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 33A-like [Phoenix dactylifera]
Length = 1327
Score = 76.3 bits (186), Expect = 9e-14
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = -1
Query: 273 LQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSGSEAYDSIGRNFSSSN-VG 97
L SSL++LG + +LLVPP SV F+ GS +SI N + N G
Sbjct: 442 LVSSLQVLGDYVSLLVPPPSVISAANQAAAKAMMFVSGLSVGSGYLESISLNDKTINCTG 501
Query: 96 NLWHLIVEACIARKLVNSSAYLWPSYV 16
N+WHLIVEACI+R L+++SAY WP Y+
Sbjct: 502 NMWHLIVEACISRNLLDTSAYYWPGYI 528
>XP_002323105.2 hypothetical protein POPTR_0016s14910g [Populus trichocarpa]
EEF04866.2 hypothetical protein POPTR_0016s14910g
[Populus trichocarpa]
Length = 1346
Score = 76.3 bits (186), Expect = 9e-14
Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Frame = -1
Query: 327 HIHNVENKTLESEPMQSALQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSG 148
H + V+ K S ++ L SSL++LGQF+ LL PP SV FI +SKS
Sbjct: 458 HENQVDGKGQTSR--KNGLISSLQVLGQFSGLLCPPASVIGAANAAAVKAASFISNSKSA 515
Query: 147 SEAYDSIGRNFSSSNV---GNLWHLIVEACIARKLVNSSAYLWPSYV 16
DS+ S S++ GNL HLI+EACIARKL+++S Y WP YV
Sbjct: 516 RG--DSVCGTHSDSDINAGGNLRHLIIEACIARKLIDTSVYYWPGYV 560
>EEE67830.1 hypothetical protein OsJ_25606 [Oryza sativa Japonica Group]
Length = 1275
Score = 75.9 bits (185), Expect = 1e-13
Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = -1
Query: 297 ESEPMQSALQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSGSEAYDSIGRN 118
+S P S L SSL+ L Q++ LLVPP SV F + KSG +G+N
Sbjct: 390 KSLPKTSGLVSSLQDLIQYSGLLVPPSSVVNAANAAASKAAAFKANYKSGGGNPGMMGQN 449
Query: 117 FSSSN-VGNLWHLIVEACIARKLVNSSAYLWPSYV 16
SS+ VGN+ HLIVEACI+R L+++S+YLWP YV
Sbjct: 450 DSSTKTVGNMLHLIVEACISRNLIDTSSYLWPGYV 484
>XP_015647066.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
[Oryza sativa Japonica Group] BAC80014.1 unknown protein
[Oryza sativa Japonica Group] BAF22568.1 Os07g0681500
[Oryza sativa Japonica Group] BAT03248.1 Os07g0681500
[Oryza sativa Japonica Group]
Length = 1315
Score = 75.9 bits (185), Expect = 1e-13
Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = -1
Query: 297 ESEPMQSALQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSGSEAYDSIGRN 118
+S P S L SSL+ L Q++ LLVPP SV F + KSG +G+N
Sbjct: 430 KSLPKTSGLVSSLQDLIQYSGLLVPPSSVVNAANAAASKAAAFKANYKSGGGNPGMMGQN 489
Query: 117 FSSSN-VGNLWHLIVEACIARKLVNSSAYLWPSYV 16
SS+ VGN+ HLIVEACI+R L+++S+YLWP YV
Sbjct: 490 DSSTKTVGNMLHLIVEACISRNLIDTSSYLWPGYV 524
>XP_009365797.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Pyrus x bretschneideri]
Length = 1315
Score = 75.9 bits (185), Expect = 1e-13
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = -1
Query: 273 LQSSLKILGQFTNLLVPPQSVXXXXXXXXXXXXKFIYSSKSGSEAYDSIGRNFSSSNV-G 97
L SSL++LG F LL PP+SV FI ++ S D IG N SS++ G
Sbjct: 439 LVSSLQMLGNFIGLLAPPRSVVSAANRAAAKAMFFISGTRVESAPLDFIGTNDSSTDCSG 498
Query: 96 NLWHLIVEACIARKLVNSSAYLWPSYV 16
N+ HLIVEACIAR L+++SAY WP YV
Sbjct: 499 NMRHLIVEACIARNLIDTSAYFWPGYV 525