BLASTX nr result

ID: Ephedra29_contig00023997 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00023997
         (314 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001761147.1 predicted protein [Physcomitrella patens] EDQ7386...    55   1e-06
XP_011621942.1 PREDICTED: uncharacterized protein LOC18430075 [A...    55   1e-06
ERN01976.1 hypothetical protein AMTR_s00045p00068210 [Amborella ...    55   1e-06
KQK92998.1 hypothetical protein SETIT_033929mg [Setaria italica]       54   4e-06
XP_012704294.1 PREDICTED: WD repeat-containing protein 6 [Setari...    54   4e-06

>XP_001761147.1 predicted protein [Physcomitrella patens] EDQ73869.1 predicted
            protein [Physcomitrella patens]
          Length = 1468

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
 Frame = +3

Query: 33   PLLLFSAGAKQVLTCWLLKWKNH-TSGFHNDSLIENSVDCSHEVEVDN---SMISSQWLT 200
            P+LL S GAK+VLTCWLL+WK    SG  +   +E     S +    N    ++SS+WL 
Sbjct: 937  PILLLSVGAKEVLTCWLLEWKQEPNSGSASVDEVEMIGTVSEDDVQQNLVTEVLSSRWLC 996

Query: 201  SYMQPRINKTSRKASMTNQL 260
            SY  PR  K  RK    +++
Sbjct: 997  SYSPPRTFKLRRKEKTASKV 1016


>XP_011621942.1 PREDICTED: uncharacterized protein LOC18430075 [Amborella trichopoda]
          Length = 1399

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
 Frame = +3

Query: 6    DASSMNKDAPLLLFSAGAKQVLTCWLLK-----WKNHTSGFHNDSLIENSVDCSHEVEVD 170
            DASS+      +L S GAKQVLTCWLLK      K  T G+   + I           ++
Sbjct: 885  DASSIRMSDNFILISVGAKQVLTCWLLKDLKCDNKEETDGYQTKAGIHG------RNVLE 938

Query: 171  NSMISSQWLTSYMQPRINKTSRK 239
             S +S QWL+++M P+ + TSR+
Sbjct: 939  ASQVSFQWLSTHMPPKFSSTSRR 961


>ERN01976.1 hypothetical protein AMTR_s00045p00068210 [Amborella trichopoda]
          Length = 1417

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
 Frame = +3

Query: 6    DASSMNKDAPLLLFSAGAKQVLTCWLLK-----WKNHTSGFHNDSLIENSVDCSHEVEVD 170
            DASS+      +L S GAKQVLTCWLLK      K  T G+   + I           ++
Sbjct: 903  DASSIRMSDNFILISVGAKQVLTCWLLKDLKCDNKEETDGYQTKAGIHG------RNVLE 956

Query: 171  NSMISSQWLTSYMQPRINKTSRK 239
             S +S QWL+++M P+ + TSR+
Sbjct: 957  ASQVSFQWLSTHMPPKFSSTSRR 979


>KQK92998.1 hypothetical protein SETIT_033929mg [Setaria italica]
          Length = 1310

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 30/84 (35%), Positives = 45/84 (53%)
 Frame = +3

Query: 6    DASSMNKDAPLLLFSAGAKQVLTCWLLKWKNHTSGFHNDSLIENSVDCSHEVEVDNSMIS 185
            D +  NKD  LLL S G+KQVLT W+L+ +        + L  +S   S  +E  +  +S
Sbjct: 840  DITVENKDETLLLISVGSKQVLTTWILQPRIENGQVCLNGLDVDSKQSSKNLESGDLAMS 899

Query: 186  SQWLTSYMQPRINKTSRKASMTNQ 257
             QWLT++M P++ +   KA    Q
Sbjct: 900  FQWLTTHMPPKLTRNRLKAGHIKQ 923


>XP_012704294.1 PREDICTED: WD repeat-containing protein 6 [Setaria italica]
          Length = 1333

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 30/84 (35%), Positives = 45/84 (53%)
 Frame = +3

Query: 6    DASSMNKDAPLLLFSAGAKQVLTCWLLKWKNHTSGFHNDSLIENSVDCSHEVEVDNSMIS 185
            D +  NKD  LLL S G+KQVLT W+L+ +        + L  +S   S  +E  +  +S
Sbjct: 863  DITVENKDETLLLISVGSKQVLTTWILQPRIENGQVCLNGLDVDSKQSSKNLESGDLAMS 922

Query: 186  SQWLTSYMQPRINKTSRKASMTNQ 257
             QWLT++M P++ +   KA    Q
Sbjct: 923  FQWLTTHMPPKLTRNRLKAGHIKQ 946


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