BLASTX nr result
ID: Ephedra29_contig00023986
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00023986
(363 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010690228.1 PREDICTED: pentatricopeptide repeat-containing pr... 98 3e-21
KNA12260.1 hypothetical protein SOVF_127550 [Spinacia oleracea] 92 2e-19
GAV60133.1 Glyco_transf_8 domain-containing protein/PPR domain-c... 89 2e-18
XP_008447846.1 PREDICTED: pentatricopeptide repeat-containing pr... 88 6e-18
KDO68326.1 hypothetical protein CISIN_1g044873mg [Citrus sinensis] 85 7e-17
XP_006486600.1 PREDICTED: pentatricopeptide repeat-containing pr... 85 7e-17
XP_006422433.1 hypothetical protein CICLE_v10027787mg [Citrus cl... 85 7e-17
5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 85 8e-17
5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide ... 85 8e-17
5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 85 8e-17
5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 85 8e-17
KZV53377.1 hypothetical protein F511_06519 [Dorcoceras hygrometr... 85 1e-16
XP_007214186.1 hypothetical protein PRUPE_ppa020045mg [Prunus pe... 83 1e-16
XP_016648825.1 PREDICTED: pentatricopeptide repeat-containing pr... 84 2e-16
XP_008227454.1 PREDICTED: pentatricopeptide repeat-containing pr... 84 2e-16
XP_010269231.1 PREDICTED: pentatricopeptide repeat-containing pr... 84 2e-16
XP_017700686.1 PREDICTED: pentatricopeptide repeat-containing pr... 84 2e-16
XP_002527150.1 PREDICTED: pentatricopeptide repeat-containing pr... 84 3e-16
ONI09763.1 hypothetical protein PRUPE_4G007800 [Prunus persica] ... 83 3e-16
ONI09759.1 hypothetical protein PRUPE_4G007800 [Prunus persica] ... 83 3e-16
>XP_010690228.1 PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Beta vulgaris subsp. vulgaris] KMT01232.1 hypothetical
protein BVRB_9g212500 [Beta vulgaris subsp. vulgaris]
Length = 873
Score = 97.8 bits (242), Expect = 3e-21
Identities = 42/110 (38%), Positives = 74/110 (67%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L+E+S+ + K++L+P+LYK+M + V+P+ +TF+++IRGLC++G + DA K+
Sbjct: 118 YNVLLESSVRQNKLDLVPLLYKDMFFSGVSPEIYTFNLLIRGLCDSGHLEDARKVLDKMP 177
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G PN S IL++ C+T + L + DE++++G VP+ V+Y +I
Sbjct: 178 ERGCKPNEFSFGILIRGYCRTGFATEGLVILDEMRQTGLVPNKVVYNTLI 227
>KNA12260.1 hypothetical protein SOVF_127550 [Spinacia oleracea]
Length = 866
Score = 92.4 bits (228), Expect = 2e-19
Identities = 41/110 (37%), Positives = 70/110 (63%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L+E+S+ + K+ +P+LYK+M + V+P+ +TF+++IRGLC++G + DA K+
Sbjct: 114 YNVLLESSVRENKVNWVPLLYKDMFISGVSPEVYTFNLLIRGLCDSGHLKDARKVLDKMP 173
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G PN S IL++ C+ + L + E++RSG VP+ V+Y +I
Sbjct: 174 ERGCKPNEFSFGILIRGYCRNRLSVEGLVILGEMRRSGLVPNKVVYNTLI 223
Score = 55.1 bits (131), Expect = 2e-06
Identities = 28/118 (23%), Positives = 59/118 (50%)
Frame = +1
Query: 4 DAKLTPSFYNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDA 183
D +T YN + + KGK+ ++ KEM+ P+ ++++ VI GLC+ + DA
Sbjct: 320 DRLMTLESYNIWLMGLVRKGKLLEAQLVLKEMLEKGKEPNIYSYNTVIDGLCKNNMLSDA 379
Query: 184 LGFFRKIATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
+ + +G P++ + L+ C +A+A +E+ +G +P++ I++
Sbjct: 380 KRMIKLMQDSGIQPDTVTYSSLLHGYCSKGIVAEANATLNEMMAAGCLPNIYTCNILL 437
>GAV60133.1 Glyco_transf_8 domain-containing protein/PPR domain-containing
protein/PPR_1 domain-containing protein/PPR_2
domain-containing protein, partial [Cephalotus
follicularis]
Length = 1517
Score = 89.4 bits (220), Expect = 2e-18
Identities = 42/110 (38%), Positives = 70/110 (63%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L+++ I + +++ + LYK+M+ V+P+ +TF+++I LC+ G + DA G F K++
Sbjct: 760 YNVLLQSFIRESRVDYVLWLYKDMVVACVSPETYTFNLLISALCDLGWLEDARGLFDKMS 819
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G PN SL ILV+ C+ +Q L L DE+ +SGF P+ V+Y +I
Sbjct: 820 DKGCKPNEYSLGILVRGYCRAGFTSQGLELLDEMGKSGFSPNKVVYNTLI 869
Score = 57.0 bits (136), Expect = 5e-07
Identities = 28/112 (25%), Positives = 56/112 (50%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN +++ +G +E L + M + + ++H++++G GK+ +A ++
Sbjct: 939 YNLMLDGFCKEGMLEEAKSLIESMKKVGDLLNLESYHILLQGFVRNGKLFEAQAVLSEMV 998
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G PN+ S IL+ +C+ L++A + D + SG PD V Y ++ G
Sbjct: 999 DEGIQPNNYSYNILMNGLCKNGMLSEARRVMDVMISSGTSPDTVTYSTLLHG 1050
Score = 54.3 bits (129), Expect = 5e-06
Identities = 23/111 (20%), Positives = 58/111 (52%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
Y+ ++ + +GK+ + K+M + N T++ +I GL + +I + G ++
Sbjct: 1207 YDTVIHSFCKEGKISSAFRVLKDMEKKGCNKSLQTYNSLILGLGKKNQIFEIYGLMNEMR 1266
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIK 360
G SPN+ + +++ +C+ + A ++ DE+ + G P++ + ++I+
Sbjct: 1267 ERGVSPNACTYNNIIRCLCERGKFQDATSILDEMLQKGTAPNIASFRMLIE 1317
Score = 53.9 bits (128), Expect = 6e-06
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILY---KEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFR 198
YN+L+ +G GK I +Y EM V+P+A T++ +IR LCE GK DA
Sbjct: 1242 YNSLI---LGLGKKNQIFEIYGLMNEMRERGVSPNACTYNNIIRCLCERGKFQDATSILD 1298
Query: 199 KIATAGYSPNSSSLEILVKAMCQTSRLAQALNLFD 303
++ G +PN +S +L++A C+ A +F+
Sbjct: 1299 EMLQKGTAPNIASFRMLIEAFCKAGDFRVAQEVFE 1333
Score = 53.5 bits (127), Expect = 9e-06
Identities = 29/112 (25%), Positives = 54/112 (48%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN LM G + + MI + +PD T+ ++ G C K+ +A R++
Sbjct: 1009 YNILMNGLCKNGMLSEARRVMDVMISSGTSPDTVTYSTLLHGYCSKRKLYEANNVLREMM 1068
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
+ SPN+ + IL+ ++ + ++++A L ++ G+ D V III G
Sbjct: 1069 RSNCSPNNYTCNILLHSLWKEGKISEAEELLQKMNERGYGLDTVTCNIIIDG 1120
>XP_008447846.1 PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Cucumis melo] XP_008447848.1 PREDICTED:
pentatricopeptide repeat-containing protein At2g17140
[Cucumis melo] XP_008447849.1 PREDICTED:
pentatricopeptide repeat-containing protein At2g17140
[Cucumis melo] XP_016900493.1 PREDICTED:
pentatricopeptide repeat-containing protein At2g17140
[Cucumis melo]
Length = 873
Score = 88.2 bits (217), Expect = 6e-18
Identities = 42/112 (37%), Positives = 68/112 (60%)
Frame = +1
Query: 22 SFYNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRK 201
SFYN L S+ +G+++ + LYK+M+ +VNP +TF+++I LCE G + +A F K
Sbjct: 117 SFYNLLFRCSLKEGRVDCVIWLYKDMVVARVNPQTYTFNLLISALCEMGYLENAREVFDK 176
Query: 202 IATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
++ G PN SL ILV+ C+ + ++L DE++ SG P+ V Y +I
Sbjct: 177 MSEKGCKPNEFSLGILVRGYCRAGLHSNGIDLLDEMRSSGAFPNRVAYNTVI 228
>KDO68326.1 hypothetical protein CISIN_1g044873mg [Citrus sinensis]
Length = 874
Score = 85.1 bits (209), Expect = 7e-17
Identities = 40/110 (36%), Positives = 66/110 (60%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L E + K M+ + LYK+M+ KV+P+ +TF+++IR LC++G++ DA F K++
Sbjct: 119 YNVLFECCVRKQHMDYLMWLYKDMVVAKVSPETYTFNLLIRALCDSGRLEDARKLFDKMS 178
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G PN S ILV+ C+ + L L + ++ GF P+ V+Y +I
Sbjct: 179 DKGCRPNEFSFAILVRGYCRAGLADEGLELMELMRSLGFSPNRVVYNTLI 228
Score = 59.7 bits (143), Expect = 6e-08
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Frame = +1
Query: 7 AKLTPSFY--NALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVD 180
AK++P Y N L+ A G++E L+ +M P+ +F +++RG C AG +
Sbjct: 145 AKVSPETYTFNLLIRALCDSGRLEDARKLFDKMSDKGCRPNEFSFAILVRGYCRAGLADE 204
Query: 181 ALGFFRKIATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLY 345
L + + G+SPN L+ + C+ + A + + ++ G PDVV +
Sbjct: 205 GLELMELMRSLGFSPNRVVYNTLISSFCRDGKTEDAEKMVERMREDGMFPDVVTF 259
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/112 (24%), Positives = 55/112 (49%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN ++E +G +E L + +N + + ++++ + GL GK+V+A +++
Sbjct: 298 YNLMLEGFCKEGMLEEAKTLVDAVTKNGGSLNLESYNIWLMGLVRNGKLVEAQAVLQEMV 357
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ S IL+ +C+ L+ A + D + G PD + Y ++ G
Sbjct: 358 EKGVEPSIHSYNILIDGLCKNRMLSDARMVMDLMVDRGISPDTITYSTLLHG 409
Score = 53.5 bits (127), Expect = 8e-06
Identities = 27/110 (24%), Positives = 54/110 (49%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN + + GK+ + +EM+ V P H+++++I GLC+ + DA +
Sbjct: 333 YNIWLMGLVRNGKLVEAQAVLQEMVEKGVEPSIHSYNILIDGLCKNRMLSDARMVMDLMV 392
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G SP++ + L+ C ++ +A N+ E+ R+G P + I++
Sbjct: 393 DRGISPDTITYSTLLHGYCSNGKVFEANNVLYEMIRNGCSPTIFTCNILL 442
>XP_006486600.1 PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Citrus sinensis] XP_006486605.1
PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Citrus sinensis]
Length = 889
Score = 85.1 bits (209), Expect = 7e-17
Identities = 40/110 (36%), Positives = 66/110 (60%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L E + K M+ + LYK+M+ KV+P+ +TF+++IR LC++G++ DA F K++
Sbjct: 119 YNVLFECCVRKQHMDYLMWLYKDMVVAKVSPETYTFNLLIRALCDSGRLEDARKLFDKMS 178
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G PN S ILV+ C+ + L L + ++ GF P+ V+Y +I
Sbjct: 179 DKGCRPNEFSFAILVRGYCRAGLADEGLELMELMRSLGFSPNRVVYNTLI 228
Score = 59.3 bits (142), Expect = 8e-08
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Frame = +1
Query: 7 AKLTPSFY--NALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVD 180
AK++P Y N L+ A G++E L+ +M P+ +F +++RG C AG +
Sbjct: 145 AKVSPETYTFNLLIRALCDSGRLEDARKLFDKMSDKGCRPNEFSFAILVRGYCRAGLADE 204
Query: 181 ALGFFRKIATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLY 345
L + + G+SPN L+ + C+ + A + + ++ G PDVV +
Sbjct: 205 GLELMELMRSLGFSPNRVVYNTLISSFCRDGKTDDAEKMVERMREDGMFPDVVTF 259
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/112 (24%), Positives = 55/112 (49%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN ++E +G +E L + +N + + ++++ + GL GK+V+A +++
Sbjct: 298 YNLMLEGFCKEGMLEEAKTLVDAVTKNGGSLNLESYNIWLMGLVRNGKLVEAQAVLQEMV 357
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ S IL+ +C+ L+ A + D + G PD + Y ++ G
Sbjct: 358 EKGVEPSIHSYNILIDGLCKNRMLSDARMVMDLMVDRGISPDTITYSTLLHG 409
Score = 53.5 bits (127), Expect = 8e-06
Identities = 27/110 (24%), Positives = 54/110 (49%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN + + GK+ + +EM+ V P H+++++I GLC+ + DA +
Sbjct: 333 YNIWLMGLVRNGKLVEAQAVLQEMVEKGVEPSIHSYNILIDGLCKNRMLSDARMVMDLMV 392
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G SP++ + L+ C ++ +A N+ E+ R+G P + I++
Sbjct: 393 DRGISPDTITYSTLLHGYCSNGKVFEANNVLYEMIRNGCSPTIFTCNILL 442
>XP_006422433.1 hypothetical protein CICLE_v10027787mg [Citrus clementina]
ESR35673.1 hypothetical protein CICLE_v10027787mg
[Citrus clementina]
Length = 889
Score = 85.1 bits (209), Expect = 7e-17
Identities = 40/110 (36%), Positives = 66/110 (60%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L E + K M+ + LYK+M+ KV+P+ +TF+++IR LC++G++ DA F K++
Sbjct: 119 YNVLFECCVRKQHMDYLMWLYKDMVVAKVSPETYTFNLLIRALCDSGRLEDARKLFDKMS 178
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G PN S ILV+ C+ + L L + ++ GF P+ V+Y +I
Sbjct: 179 DKGCRPNEFSFAILVRGYCRAGLADEGLELMELMRSLGFSPNRVVYNTLI 228
Score = 59.7 bits (143), Expect = 6e-08
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Frame = +1
Query: 7 AKLTPSFY--NALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVD 180
AK++P Y N L+ A G++E L+ +M P+ +F +++RG C AG +
Sbjct: 145 AKVSPETYTFNLLIRALCDSGRLEDARKLFDKMSDKGCRPNEFSFAILVRGYCRAGLADE 204
Query: 181 ALGFFRKIATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLY 345
L + + G+SPN L+ + C+ + A + + ++ G PDVV +
Sbjct: 205 GLELMELMRSLGFSPNRVVYNTLISSFCRDGKTEDAEKMVERMREDGMFPDVVTF 259
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/112 (24%), Positives = 55/112 (49%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN ++E +G +E L + +N + + ++++ + GL GK+V+A +++
Sbjct: 298 YNLMLEGFCKEGMLEEAKTLVDAVTKNGGSLNLESYNIWLMGLVRNGKLVEAQAVLQEMV 357
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ S IL+ +C+ L+ A + D + G PD + Y ++ G
Sbjct: 358 EKGVEPSIHSYNILIDGLCKNRMLSDARMVMDLMVDRGISPDTITYSTLLHG 409
Score = 53.5 bits (127), Expect = 8e-06
Identities = 27/110 (24%), Positives = 54/110 (49%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN + + GK+ + +EM+ V P H+++++I GLC+ + DA +
Sbjct: 333 YNIWLMGLVRNGKLVEAQAVLQEMVEKGVEPSIHSYNILIDGLCKNRMLSDARMVMDLMV 392
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G SP++ + L+ C ++ +A N+ E+ R+G P + I++
Sbjct: 393 DRGISPDTITYSTLLHGYCSNGKVFEANNVLYEMIRNGCSPTIFTCNILL 442
>5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8g2 In Complex With Its Target Rna U8g2
Length = 460
Score = 84.7 bits (208), Expect = 8e-17
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 54 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 113
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 114 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 165
Score = 84.7 bits (208), Expect = 8e-17
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 264 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 323
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 324 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 375
Score = 84.3 bits (207), Expect = 1e-16
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 89 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 148
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 149 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDG 200
Score = 84.0 bits (206), Expect = 2e-16
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 124 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 183
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 184 EKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDG 235
Score = 83.2 bits (204), Expect = 3e-16
Identities = 39/112 (34%), Positives = 64/112 (57%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T+ +I GLC+AGK+ +AL F ++
Sbjct: 159 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMV 218
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 219 EKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 270
Score = 82.4 bits (202), Expect = 6e-16
Identities = 38/112 (33%), Positives = 64/112 (57%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
Y L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 229 YTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 288
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 289 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 340
Score = 81.3 bits (199), Expect = 1e-15
Identities = 38/112 (33%), Positives = 63/112 (56%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
Y L++ GK++ L++EM+ + PD T+ +I GLC+AGK+ +AL F ++
Sbjct: 194 YTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMV 253
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 254 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 305
Score = 79.0 bits (193), Expect = 9e-15
Identities = 35/111 (31%), Positives = 64/111 (57%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 299 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 358
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIK 360
G P+ + L+ +C+ +L +AL LF+E+ G PD + Y +++
Sbjct: 359 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVE 409
Score = 76.3 bits (186), Expect = 8e-14
Identities = 39/119 (32%), Positives = 64/119 (53%)
Frame = +1
Query: 7 AKLTPSFYNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDAL 186
++L Y ++ A G+ E L+ E+ R V P T++ +I GLC+AGK+ +AL
Sbjct: 12 SRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEAL 71
Query: 187 GFFRKIATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
F ++ G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 72 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 130
Score = 62.0 bits (149), Expect = 8e-09
Identities = 28/97 (28%), Positives = 53/97 (54%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 334 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 393
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRS 318
G P+ + +V++ C+ R +A E+ +
Sbjct: 394 EKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSET 430
>5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8c2 In Complex With Its Target Rna U8c2
Length = 460
Score = 84.7 bits (208), Expect = 8e-17
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 54 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 113
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 114 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 165
Score = 84.7 bits (208), Expect = 8e-17
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 89 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 148
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 149 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 200
Score = 84.7 bits (208), Expect = 8e-17
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 264 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 323
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 324 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 375
Score = 82.4 bits (202), Expect = 6e-16
Identities = 38/112 (33%), Positives = 64/112 (57%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 124 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 183
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G P VV Y +I G
Sbjct: 184 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDG 235
Score = 82.4 bits (202), Expect = 6e-16
Identities = 38/112 (33%), Positives = 64/112 (57%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 159 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 218
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G P VV Y +I G
Sbjct: 219 EKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDG 270
Score = 82.4 bits (202), Expect = 6e-16
Identities = 38/112 (33%), Positives = 64/112 (57%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + P T++ +I GLC+AGK+ +AL F ++
Sbjct: 194 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMV 253
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 254 EKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 305
Score = 82.4 bits (202), Expect = 6e-16
Identities = 38/112 (33%), Positives = 64/112 (57%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + P T++ +I GLC+AGK+ +AL F ++
Sbjct: 229 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMV 288
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 289 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 340
Score = 79.0 bits (193), Expect = 9e-15
Identities = 35/111 (31%), Positives = 64/111 (57%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 299 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 358
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIK 360
G P+ + L+ +C+ +L +AL LF+E+ G PD + Y +++
Sbjct: 359 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVE 409
Score = 76.3 bits (186), Expect = 8e-14
Identities = 39/119 (32%), Positives = 64/119 (53%)
Frame = +1
Query: 7 AKLTPSFYNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDAL 186
++L Y ++ A G+ E L+ E+ R V P T++ +I GLC+AGK+ +AL
Sbjct: 12 SRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEAL 71
Query: 187 GFFRKIATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
F ++ G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 72 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 130
Score = 62.0 bits (149), Expect = 8e-09
Identities = 28/97 (28%), Positives = 53/97 (54%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 334 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 393
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRS 318
G P+ + +V++ C+ R +A E+ +
Sbjct: 394 EKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSET 430
>5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U10 In Complex With Its Target Rna U10
Length = 460
Score = 84.7 bits (208), Expect = 8e-17
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 54 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 113
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 114 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 165
Score = 84.7 bits (208), Expect = 8e-17
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 89 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 148
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 149 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 200
Score = 84.7 bits (208), Expect = 8e-17
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 124 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 183
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 184 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 235
Score = 84.7 bits (208), Expect = 8e-17
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 159 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 218
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 219 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 270
Score = 84.7 bits (208), Expect = 8e-17
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 194 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 253
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 254 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 305
Score = 84.7 bits (208), Expect = 8e-17
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 229 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 288
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 289 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 340
Score = 84.7 bits (208), Expect = 8e-17
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 264 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 323
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 324 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 375
Score = 79.0 bits (193), Expect = 9e-15
Identities = 35/111 (31%), Positives = 64/111 (57%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 299 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 358
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIK 360
G P+ + L+ +C+ +L +AL LF+E+ G PD + Y +++
Sbjct: 359 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVE 409
Score = 76.3 bits (186), Expect = 8e-14
Identities = 39/119 (32%), Positives = 64/119 (53%)
Frame = +1
Query: 7 AKLTPSFYNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDAL 186
++L Y ++ A G+ E L+ E+ R V P T++ +I GLC+AGK+ +AL
Sbjct: 12 SRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEAL 71
Query: 187 GFFRKIATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
F ++ G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 72 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 130
Score = 62.0 bits (149), Expect = 8e-09
Identities = 28/97 (28%), Positives = 53/97 (54%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 334 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 393
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRS 318
G P+ + +V++ C+ R +A E+ +
Sbjct: 394 EKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSET 430
>5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8a2 In Complex With Its Target Rna U8a2
Length = 460
Score = 84.7 bits (208), Expect = 8e-17
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 54 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 113
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 114 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 165
Score = 84.7 bits (208), Expect = 8e-17
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 89 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 148
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 149 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDG 200
Score = 84.7 bits (208), Expect = 8e-17
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 264 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 323
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 324 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 375
Score = 84.0 bits (206), Expect = 2e-16
Identities = 39/112 (34%), Positives = 64/112 (57%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T+ +I GLC+AGK+ +AL F ++
Sbjct: 159 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMV 218
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G PN + L+ +C+ +L +AL LF+E+ G P+VV Y +I G
Sbjct: 219 EKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDG 270
Score = 82.8 bits (203), Expect = 4e-16
Identities = 38/112 (33%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 124 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 183
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G P+VV Y +I G
Sbjct: 184 EKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDG 235
Score = 82.0 bits (201), Expect = 8e-16
Identities = 38/112 (33%), Positives = 64/112 (57%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
Y+ L++ GK++ L++EM+ + P+ T+ +I GLC+AGK+ +AL F ++
Sbjct: 194 YSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMV 253
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G PN + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 254 EKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 305
Score = 80.9 bits (198), Expect = 2e-15
Identities = 37/112 (33%), Positives = 65/112 (58%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
Y+ L++ GK++ L++EM+ + P+ T++ +I GLC+AGK+ +AL F ++
Sbjct: 229 YSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMV 288
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 289 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 340
Score = 79.0 bits (193), Expect = 9e-15
Identities = 35/111 (31%), Positives = 64/111 (57%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 299 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 358
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIK 360
G P+ + L+ +C+ +L +AL LF+E+ G PD + Y +++
Sbjct: 359 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVE 409
Score = 76.3 bits (186), Expect = 8e-14
Identities = 39/119 (32%), Positives = 64/119 (53%)
Frame = +1
Query: 7 AKLTPSFYNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDAL 186
++L Y ++ A G+ E L+ E+ R V P T++ +I GLC+AGK+ +AL
Sbjct: 12 SRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEAL 71
Query: 187 GFFRKIATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
F ++ G P+ + L+ +C+ +L +AL LF+E+ G PDVV Y +I G
Sbjct: 72 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 130
Score = 62.0 bits (149), Expect = 8e-09
Identities = 28/97 (28%), Positives = 53/97 (54%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++ GK++ L++EM+ + PD T++ +I GLC+AGK+ +AL F ++
Sbjct: 334 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 393
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRS 318
G P+ + +V++ C+ R +A E+ +
Sbjct: 394 EKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSET 430
>KZV53377.1 hypothetical protein F511_06519 [Dorcoceras hygrometricum]
Length = 870
Score = 84.7 bits (208), Expect = 1e-16
Identities = 39/110 (35%), Positives = 68/110 (61%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L+ AS+ + + + LYK++I +KV P+ +TF+++I GLC++G++ +A F ++
Sbjct: 115 YNLLIRASLQRSCSDYVSWLYKDLIFSKVRPETYTFNLLISGLCDSGRLEEARELFDRMP 174
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G PN S ILV+ C+ + LNL +K+ G +P+VV+Y +I
Sbjct: 175 DKGCEPNEFSFGILVRGYCRLGLPHKGLNLLGMMKKMGILPNVVIYNTLI 224
>XP_007214186.1 hypothetical protein PRUPE_ppa020045mg [Prunus persica]
Length = 313
Score = 83.2 bits (204), Expect = 1e-16
Identities = 40/110 (36%), Positives = 67/110 (60%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++A G +E L++EMI ++P++ + +++I GLC +GK+ DAL F R +
Sbjct: 153 YNGLIKALCKAGAVEKARGLFEEMIMKGLHPNSISCNILINGLCRSGKVYDALEFLRDMI 212
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G P+ + L+ +C+ R+++ALNLFD L+ G PDV+ Y +I
Sbjct: 213 HRGLMPDIVTYNSLINGLCKLGRISEALNLFDRLQVEGMWPDVITYNTLI 262
Score = 70.5 bits (171), Expect = 6e-12
Identities = 35/112 (31%), Positives = 60/112 (53%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L+ A + +G ++ L EM+ D T++ +I+ LC+AG + A G F ++
Sbjct: 118 YNTLINAFLTRGAIQEALKLVNEMLFRGCPLDKITYNGLIKALCKAGAVEKARGLFEEMI 177
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G PNS S IL+ +C++ ++ AL ++ G +PD+V Y +I G
Sbjct: 178 MKGLHPNSISCNILINGLCRSGKVYDALEFLRDMIHRGLMPDIVTYNSLING 229
Score = 61.6 bits (148), Expect = 9e-09
Identities = 34/111 (30%), Positives = 56/111 (50%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L+ A GK+ ++ E+ N+ PD TF+ +I GLC+ K+ +ALG +R +
Sbjct: 48 YNRLISALCKDGKVHEALKVFSEISSNECKPDIFTFNSLIYGLCKVDKMEEALGLYRDMV 107
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIK 360
G N+ + L+ A + +AL L +E+ G D + Y +IK
Sbjct: 108 LEGVIANTVTYNTLINAFLTRGAIQEALKLVNEMLFRGCPLDKITYNGLIK 158
>XP_016648825.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial isoform X2 [Prunus mume]
Length = 695
Score = 84.0 bits (206), Expect = 2e-16
Identities = 40/110 (36%), Positives = 67/110 (60%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++A G +E L++EMI ++P++ + +++I GLC +GK+ DAL F R +
Sbjct: 535 YNGLIKALCKAGAVEKARGLFEEMIMKGLHPNSISCNILINGLCRSGKVYDALEFLRDMI 594
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G P+ + L+ +C+ R+++ALNLFD L+ G PDV+ Y +I
Sbjct: 595 HRGLMPDIVTYNSLINGLCKLGRISEALNLFDRLQVEGMCPDVITYNTLI 644
Score = 70.5 bits (171), Expect = 1e-11
Identities = 35/112 (31%), Positives = 60/112 (53%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L+ A + +G ++ L EM+ D T++ +I+ LC+AG + A G F ++
Sbjct: 500 YNTLINAFLTRGAIQEALKLVNEMLFRGCPLDKITYNGLIKALCKAGAVEKARGLFEEMI 559
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G PNS S IL+ +C++ ++ AL ++ G +PD+V Y +I G
Sbjct: 560 MKGLHPNSISCNILINGLCRSGKVYDALEFLRDMIHRGLMPDIVTYNSLING 611
Score = 62.8 bits (151), Expect = 5e-09
Identities = 35/111 (31%), Positives = 56/111 (50%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L+ A GK+ L+ E+ N+ PD TF+ +I GLC+ K+ +ALG +R +
Sbjct: 430 YNRLISALCKDGKVHEALKLFSEISSNECKPDIFTFNSLIYGLCKVDKMEEALGLYRDMV 489
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIK 360
G N+ + L+ A + +AL L +E+ G D + Y +IK
Sbjct: 490 LEGVIANTVTYNTLINAFLTRGAIQEALKLVNEMLFRGCPLDKITYNGLIK 540
Score = 60.1 bits (144), Expect = 4e-08
Identities = 30/115 (26%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Frame = +1
Query: 19 PSF--YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGF 192
P+F YN +++ + ++ P ++ +M+ ++P+ +TF +V++ LC ++ A
Sbjct: 174 PTFRSYNVVLDILVAGNCPKVAPNVFYDMLSRGISPNVYTFGVVLKALCMVNEVDTACSL 233
Query: 193 FRKIATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
R + G PNS + L+ A+ + +++ +AL L +E+ G PDV + II
Sbjct: 234 LRDMTKHGCVPNSVVYQTLIHALSKNNQVNEALRLLEEMFLMGCTPDVQTFNDII 288
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = +1
Query: 28 YNALMEASIGKGKM-ELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKI 204
+N L+ + G+ E +LY M+ + PD + F+++I GLC+ G++ A ++
Sbjct: 324 FNTLINGYVMSGRFDEAKVVLYDGMLGSGCEPDVYAFNILIHGLCKKGRLGSARELVNEM 383
Query: 205 ATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G PN + IL+ C+ +L + ++ +E+ G ++V Y +I
Sbjct: 384 EIKGCKPNVITYTILIDGFCKEGQLEETGDVLNEMSYKGLSLNIVGYNRLI 434
>XP_008227454.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial isoform X1 [Prunus mume] XP_016648822.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g64320, mitochondrial isoform X1 [Prunus mume]
XP_016648823.1 PREDICTED: pentatricopeptide
repeat-containing protein At5g64320, mitochondrial
isoform X1 [Prunus mume] XP_016648824.1 PREDICTED:
pentatricopeptide repeat-containing protein At5g64320,
mitochondrial isoform X1 [Prunus mume]
Length = 721
Score = 84.0 bits (206), Expect = 2e-16
Identities = 40/110 (36%), Positives = 67/110 (60%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++A G +E L++EMI ++P++ + +++I GLC +GK+ DAL F R +
Sbjct: 561 YNGLIKALCKAGAVEKARGLFEEMIMKGLHPNSISCNILINGLCRSGKVYDALEFLRDMI 620
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G P+ + L+ +C+ R+++ALNLFD L+ G PDV+ Y +I
Sbjct: 621 HRGLMPDIVTYNSLINGLCKLGRISEALNLFDRLQVEGMCPDVITYNTLI 670
Score = 70.5 bits (171), Expect = 1e-11
Identities = 35/112 (31%), Positives = 60/112 (53%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L+ A + +G ++ L EM+ D T++ +I+ LC+AG + A G F ++
Sbjct: 526 YNTLINAFLTRGAIQEALKLVNEMLFRGCPLDKITYNGLIKALCKAGAVEKARGLFEEMI 585
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G PNS S IL+ +C++ ++ AL ++ G +PD+V Y +I G
Sbjct: 586 MKGLHPNSISCNILINGLCRSGKVYDALEFLRDMIHRGLMPDIVTYNSLING 637
Score = 62.8 bits (151), Expect = 5e-09
Identities = 35/111 (31%), Positives = 56/111 (50%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L+ A GK+ L+ E+ N+ PD TF+ +I GLC+ K+ +ALG +R +
Sbjct: 456 YNRLISALCKDGKVHEALKLFSEISSNECKPDIFTFNSLIYGLCKVDKMEEALGLYRDMV 515
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIK 360
G N+ + L+ A + +AL L +E+ G D + Y +IK
Sbjct: 516 LEGVIANTVTYNTLINAFLTRGAIQEALKLVNEMLFRGCPLDKITYNGLIK 566
Score = 60.1 bits (144), Expect = 4e-08
Identities = 30/115 (26%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Frame = +1
Query: 19 PSF--YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGF 192
P+F YN +++ + ++ P ++ +M+ ++P+ +TF +V++ LC ++ A
Sbjct: 174 PTFRSYNVVLDILVAGNCPKVAPNVFYDMLSRGISPNVYTFGVVLKALCMVNEVDTACSL 233
Query: 193 FRKIATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
R + G PNS + L+ A+ + +++ +AL L +E+ G PDV + II
Sbjct: 234 LRDMTKHGCVPNSVVYQTLIHALSKNNQVNEALRLLEEMFLMGCTPDVQTFNDII 288
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = +1
Query: 28 YNALMEASIGKGKM-ELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKI 204
+N L+ + G+ E +LY M+ + PD + F+++I GLC+ G++ A ++
Sbjct: 350 FNTLINGYVMSGRFDEAKVVLYDGMLGSGCEPDVYAFNILIHGLCKKGRLGSARELVNEM 409
Query: 205 ATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G PN + IL+ C+ +L + ++ +E+ G ++V Y +I
Sbjct: 410 EIKGCKPNVITYTILIDGFCKEGQLEETGDVLNEMSYKGLSLNIVGYNRLI 460
>XP_010269231.1 PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Nelumbo nucifera] XP_010269232.1 PREDICTED:
pentatricopeptide repeat-containing protein At2g17140
[Nelumbo nucifera]
Length = 877
Score = 84.0 bits (206), Expect = 2e-16
Identities = 39/110 (35%), Positives = 67/110 (60%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L+E+S+ ++EL+ LYK+M+ V+P+ +TF+++I LC++G++ DA F K+
Sbjct: 115 YNVLLESSLRDNRLELVSELYKDMLIAGVSPETYTFNILISALCDSGRLEDAQKLFDKMH 174
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G PN S IL+ C+ ++ L L DE++R G + V+Y +I
Sbjct: 175 EKGCKPNGFSFGILIHGYCRAGISSRGLELLDEMRRVGCSANTVIYNTLI 224
Score = 62.8 bits (151), Expect = 5e-09
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Frame = +1
Query: 4 DAKLTPSFY--NALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIV 177
D +TP+ Y N L++ G + ++ MI N ++PD T+ +++ G C GK++
Sbjct: 352 DKGITPNIYSYNILIDGLCKSGMILDARMVLGLMISNGISPDTVTYSILLHGYCSKGKVL 411
Query: 178 DALGFFRKIATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
DA ++ G PN+ + IL++++ + + ++A L ++ G+V D+V I+I
Sbjct: 412 DANKILHEMMRNGCYPNTFTCNILLQSLWKEGKTSEAEKLLQKMNERGYVLDIVTCNIVI 471
Query: 358 KG 363
G
Sbjct: 472 DG 473
Score = 57.8 bits (138), Expect = 3e-07
Identities = 27/111 (24%), Positives = 59/111 (53%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN + + GK+ ++ EM+ + P+ ++++++I GLC++G I+DA +
Sbjct: 327 YNIWLMGLVTNGKLLRARLVLTEMVDKGITPNIYSYNILIDGLCKSGMILDARMVLGLMI 386
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIK 360
+ G SP++ + IL+ C ++ A + E+ R+G P+ I+++
Sbjct: 387 SNGISPDTVTYSILLHGYCSKGKVLDANKILHEMMRNGCYPNTFTCNILLQ 437
Score = 57.0 bits (136), Expect = 5e-07
Identities = 35/109 (32%), Positives = 55/109 (50%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L+ A K +++ + L EM + V+PD T++ +I LCE G+ DA ++
Sbjct: 596 YNPLIWALGSKHQVDEMYKLMNEMRESGVSPDVFTYNSIISSLCEVGRTQDATSLLDEML 655
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEII 354
PN SS ++L+KA C+ A +F E S F LY+I+
Sbjct: 656 QKSIFPNVSSFKLLIKAFCKACDFGAAQEVF-EFSVSIFGHKEALYDIM 703
Score = 53.5 bits (127), Expect = 8e-06
Identities = 29/110 (26%), Positives = 52/110 (47%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
Y+ +++ G+M + EM+ KV PD+ + I G C+ GK+ A R +
Sbjct: 526 YSTIIDGLCKAGRMHEAKNKFIEMVGKKVEPDSIIYDTFIHGFCKHGKLSSAFRVLRDME 585
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G ++ + L+ A+ ++ + L +E++ SG PDV Y II
Sbjct: 586 KKGCKKSTRTYNPLIWALGSKHQVDEMYKLMNEMRESGVSPDVFTYNSII 635
>XP_017700686.1 PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Phoenix dactylifera]
Length = 881
Score = 84.0 bits (206), Expect = 2e-16
Identities = 37/112 (33%), Positives = 71/112 (63%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN+L+++S+ + +L+ LYK+M+ V+PDA+TF++++ LC++G++ +A F ++
Sbjct: 117 YNSLLDSSLKANRPDLVETLYKDMLLAGVSPDAYTFNLLMCSLCDSGRLDEARLLFDRMT 176
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G PN S IL++ C+ +A+ L D ++R G P++V+Y +I G
Sbjct: 177 VKGCQPNEFSFGILIRGYCKAGFSLRAVELLDVMERVGCSPNLVIYNTLISG 228
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/111 (23%), Positives = 52/111 (46%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
Y+ L+ G+++ + EM + PD+ + + C+ GK+ A R +
Sbjct: 528 YSTLISGLCNAGRLDEAKNKFVEMTGKNIAPDSVIYDTFMHAFCKHGKMSSAFKVLRDME 587
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIK 360
G PN+ + +L+ + +L + NL +E++ G PDV+ Y +I+
Sbjct: 588 KKGCKPNTRTYNLLIWGLGSKQQLNEIQNLINEMQEKGIPPDVITYNNLIR 638
>XP_002527150.1 PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Ricinus communis] EEF35232.1 pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 874
Score = 83.6 bits (205), Expect = 3e-16
Identities = 38/110 (34%), Positives = 69/110 (62%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L+++ I + ++EL+ LYK+M+ +V+P+A+TF+++I LC++G + DA F K+
Sbjct: 115 YNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMP 174
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G PN + ILV+ C+ ++ L L +++ G +P+ VLY +I
Sbjct: 175 ARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLI 224
Score = 62.0 bits (149), Expect = 9e-09
Identities = 31/110 (28%), Positives = 57/110 (51%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN +M+ G + +L MIRN + PD T+ ++ G C GK+ +A ++
Sbjct: 364 YNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMI 423
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
+ SPN+ + +L+ ++ + R+++A NL ++ G+ D V III
Sbjct: 424 SNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIII 473
>ONI09763.1 hypothetical protein PRUPE_4G007800 [Prunus persica] ONI09764.1
hypothetical protein PRUPE_4G007800 [Prunus persica]
ONI09765.1 hypothetical protein PRUPE_4G007800 [Prunus
persica]
Length = 668
Score = 83.2 bits (204), Expect = 3e-16
Identities = 40/110 (36%), Positives = 67/110 (60%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++A G +E L++EMI ++P++ + +++I GLC +GK+ DAL F R +
Sbjct: 508 YNGLIKALCKAGAVEKARGLFEEMIMKGLHPNSISCNILINGLCRSGKVYDALEFLRDMI 567
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G P+ + L+ +C+ R+++ALNLFD L+ G PDV+ Y +I
Sbjct: 568 HRGLMPDIVTYNSLINGLCKLGRISEALNLFDRLQVEGMWPDVITYNTLI 617
Score = 70.5 bits (171), Expect = 1e-11
Identities = 35/112 (31%), Positives = 60/112 (53%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L+ A + +G ++ L EM+ D T++ +I+ LC+AG + A G F ++
Sbjct: 473 YNTLINAFLTRGAIQEALKLVNEMLFRGCPLDKITYNGLIKALCKAGAVEKARGLFEEMI 532
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G PNS S IL+ +C++ ++ AL ++ G +PD+V Y +I G
Sbjct: 533 MKGLHPNSISCNILINGLCRSGKVYDALEFLRDMIHRGLMPDIVTYNSLING 584
Score = 61.6 bits (148), Expect = 1e-08
Identities = 34/111 (30%), Positives = 56/111 (50%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L+ A GK+ ++ E+ N+ PD TF+ +I GLC+ K+ +ALG +R +
Sbjct: 403 YNRLISALCKDGKVHEALKVFSEISSNECKPDIFTFNSLIYGLCKVDKMEEALGLYRDMV 462
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIK 360
G N+ + L+ A + +AL L +E+ G D + Y +IK
Sbjct: 463 LEGVIANTVTYNTLINAFLTRGAIQEALKLVNEMLFRGCPLDKITYNGLIK 513
Score = 59.3 bits (142), Expect = 8e-08
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Frame = +1
Query: 19 PSF--YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGF 192
P+F YN ++ + ++ P ++ +M+ ++P+ +TF +V++ LC ++ A
Sbjct: 121 PTFRSYNVVLNILVAGNCPKVAPNVFYDMLSRGISPNVYTFGVVLKALCMVNEVDTACSL 180
Query: 193 FRKIATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
R + G PNS + L+ A+ + +++ +AL L +E+ G PDV + II
Sbjct: 181 LRDMTKHGCVPNSVVYQTLIHALSKNNQVNEALRLLEEMFLMGCTPDVQTFNDII 235
Score = 55.8 bits (133), Expect = 1e-06
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = +1
Query: 28 YNALMEASIGKGKM-ELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKI 204
+N L+ + G+ E +LY M+ + PD + F+++I GLC+ G++ A ++
Sbjct: 297 FNTLINGYVMSGRFDEAKVVLYDGMLGSGCEPDVYAFNILIHGLCKKGRLGSARELVNEM 356
Query: 205 ATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G PN + IL+ C+ +L +A ++ +E+ G ++V Y +I
Sbjct: 357 EIKGCEPNVITYTILIDGFCKEGQLEEAGDVLNEMSYKGLSLNIVGYNRLI 407
>ONI09759.1 hypothetical protein PRUPE_4G007800 [Prunus persica] ONI09760.1
hypothetical protein PRUPE_4G007800 [Prunus persica]
ONI09761.1 hypothetical protein PRUPE_4G007800 [Prunus
persica] ONI09762.1 hypothetical protein PRUPE_4G007800
[Prunus persica]
Length = 721
Score = 83.2 bits (204), Expect = 3e-16
Identities = 40/110 (36%), Positives = 67/110 (60%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L++A G +E L++EMI ++P++ + +++I GLC +GK+ DAL F R +
Sbjct: 561 YNGLIKALCKAGAVEKARGLFEEMIMKGLHPNSISCNILINGLCRSGKVYDALEFLRDMI 620
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G P+ + L+ +C+ R+++ALNLFD L+ G PDV+ Y +I
Sbjct: 621 HRGLMPDIVTYNSLINGLCKLGRISEALNLFDRLQVEGMWPDVITYNTLI 670
Score = 70.5 bits (171), Expect = 1e-11
Identities = 35/112 (31%), Positives = 60/112 (53%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L+ A + +G ++ L EM+ D T++ +I+ LC+AG + A G F ++
Sbjct: 526 YNTLINAFLTRGAIQEALKLVNEMLFRGCPLDKITYNGLIKALCKAGAVEKARGLFEEMI 585
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIKG 363
G PNS S IL+ +C++ ++ AL ++ G +PD+V Y +I G
Sbjct: 586 MKGLHPNSISCNILINGLCRSGKVYDALEFLRDMIHRGLMPDIVTYNSLING 637
Score = 61.6 bits (148), Expect = 1e-08
Identities = 34/111 (30%), Positives = 56/111 (50%)
Frame = +1
Query: 28 YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKIA 207
YN L+ A GK+ ++ E+ N+ PD TF+ +I GLC+ K+ +ALG +R +
Sbjct: 456 YNRLISALCKDGKVHEALKVFSEISSNECKPDIFTFNSLIYGLCKVDKMEEALGLYRDMV 515
Query: 208 TAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIIIK 360
G N+ + L+ A + +AL L +E+ G D + Y +IK
Sbjct: 516 LEGVIANTVTYNTLINAFLTRGAIQEALKLVNEMLFRGCPLDKITYNGLIK 566
Score = 59.3 bits (142), Expect = 8e-08
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Frame = +1
Query: 19 PSF--YNALMEASIGKGKMELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGF 192
P+F YN ++ + ++ P ++ +M+ ++P+ +TF +V++ LC ++ A
Sbjct: 174 PTFRSYNVVLNILVAGNCPKVAPNVFYDMLSRGISPNVYTFGVVLKALCMVNEVDTACSL 233
Query: 193 FRKIATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
R + G PNS + L+ A+ + +++ +AL L +E+ G PDV + II
Sbjct: 234 LRDMTKHGCVPNSVVYQTLIHALSKNNQVNEALRLLEEMFLMGCTPDVQTFNDII 288
Score = 55.8 bits (133), Expect = 1e-06
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = +1
Query: 28 YNALMEASIGKGKM-ELIPILYKEMIRNKVNPDAHTFHMVIRGLCEAGKIVDALGFFRKI 204
+N L+ + G+ E +LY M+ + PD + F+++I GLC+ G++ A ++
Sbjct: 350 FNTLINGYVMSGRFDEAKVVLYDGMLGSGCEPDVYAFNILIHGLCKKGRLGSARELVNEM 409
Query: 205 ATAGYSPNSSSLEILVKAMCQTSRLAQALNLFDELKRSGFVPDVVLYEIII 357
G PN + IL+ C+ +L +A ++ +E+ G ++V Y +I
Sbjct: 410 EIKGCEPNVITYTILIDGFCKEGQLEEAGDVLNEMSYKGLSLNIVGYNRLI 460