BLASTX nr result
ID: Ephedra29_contig00023801
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra29_contig00023801 (552 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AEP33745.1 chloroplast biogenesis 19, partial [Arabis hirsuta] 181 3e-52 AEP33755.1 chloroplast biogenesis 19, partial [Olimarabidopsis p... 178 2e-50 AEP33754.1 chloroplast biogenesis 19, partial [Nasturtium offici... 176 5e-50 XP_010475291.1 PREDICTED: pentatricopeptide repeat-containing pr... 177 5e-50 XP_010457671.1 PREDICTED: pentatricopeptide repeat-containing pr... 177 5e-50 XP_006417992.1 hypothetical protein EUTSA_v10009524mg [Eutrema s... 177 7e-50 JAU82171.1 Pentatricopeptide repeat-containing protein, chloropl... 176 1e-49 JAU43373.1 Pentatricopeptide repeat-containing protein, chloropl... 176 2e-49 AEP33749.1 chloroplast biogenesis 19, partial [Crucihimalaya wal... 174 4e-49 AEP33748.1 chloroplast biogenesis 19, partial [Capsella bursa-pa... 174 6e-49 AEP33746.1 chloroplast biogenesis 19, partial [Barbarea verna] 174 9e-49 AEP33744.1 chloroplast biogenesis 19, partial [Aethionema grandi... 171 2e-48 XP_018450521.1 PREDICTED: pentatricopeptide repeat-containing pr... 172 3e-48 AEP33747.1 chloroplast biogenesis 19, partial [Brassica oleracea] 172 3e-48 XP_002282081.2 PREDICTED: pentatricopeptide repeat-containing pr... 173 4e-48 XP_013660605.1 PREDICTED: pentatricopeptide repeat-containing pr... 172 4e-48 JAU27817.1 Pentatricopeptide repeat-containing protein, chloropl... 172 4e-48 AEP33750.1 chloroplast biogenesis 19, partial [Lepidium sativum] 171 7e-48 OAP12187.1 PDE247 [Arabidopsis thaliana] 171 8e-48 CBI20961.3 unnamed protein product, partial [Vitis vinifera] 172 9e-48 >AEP33745.1 chloroplast biogenesis 19, partial [Arabis hirsuta] Length = 435 Score = 181 bits (460), Expect = 3e-52 Identities = 80/182 (43%), Positives = 123/182 (67%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 +++A KLF EM +DL+SW M++ + G E+ + +FR MQ+SG+KPD +A L Sbjct: 99 VDDAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAA 158 Query: 185 CSNLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISW 364 C+NLG++ IHR ++ +++ +SN+L+D+Y +CG E AR++FD ME R V+SW Sbjct: 159 CTNLGALSFGLWIHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSW 218 Query: 365 NAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKR 544 N++I +A +G A E++ F +MQ+ G KPNA+TF L+AC H G ++E L YF+SMKR Sbjct: 219 NSVIVGFAANGHAHESLVYFRKMQEEGFKPNAVTFTGALAACNHVGLVEEGLRYFQSMKR 278 Query: 545 DY 550 DY Sbjct: 279 DY 280 Score = 75.1 bits (183), Expect = 1e-12 Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 34/168 (20%) Frame = +2 Query: 119 FRRMQLSGIKPDAQTFLALLQTCSNL--GSVVAVNEIHREIIKFGI-ASHLIISNTLVDI 289 F M+L+G++P+ TF+ALL +L GS + +H K G+ +H+++ ++ + Sbjct: 2 FSGMRLAGVEPNHITFIALLSGWGDLLSGSEALGDLLHGYACKLGLDRAHVMVGTAILGM 61 Query: 290 YAKCGSTEAAREIFDTMESRDVISWNAIITCYANSGGA---------------------- 403 Y+K G AR +FD ME ++ ++WN +I Y +G Sbjct: 62 YSKRGRFRKARLVFDYMEEKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAMI 121 Query: 404 ---------TEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEAL 520 EA+A F +MQ SG+KP+ + +A L+AC + G L L Sbjct: 122 NGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAACTNLGALSFGL 169 Score = 68.2 bits (165), Expect = 3e-10 Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 1/168 (0%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 +E A ++F +M + +VSWN+++ +A NG +++ +FR+MQ G KP+A TF L Sbjct: 200 VEFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLVYFRKMQEEGFKPNAVTFTGALAA 259 Query: 185 CSNLGSVVAVNEIHREIIK-FGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVIS 361 C+++G V + + + + I+ + LVD+Y++ G E A ++ +M Sbjct: 260 CNHVGLVEEGLRYFQSMKRDYRISPRIEHYGCLVDLYSRAGRLEDALKVVQSMP------ 313 Query: 362 WNAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGN 505 +KPN + ++L+ACR GN Sbjct: 314 ----------------------------MKPNEVVIGSLLAACRTQGN 333 >AEP33755.1 chloroplast biogenesis 19, partial [Olimarabidopsis pumila] Length = 475 Score = 178 bits (451), Expect = 2e-50 Identities = 79/182 (43%), Positives = 120/182 (65%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 + A KLF +M DL+SW M++ + G E+ + +FR MQ+SG+KPD +A L Sbjct: 131 VHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVAIIAALNA 190 Query: 185 CSNLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISW 364 C+NLG++ +HR ++ +++ +SN+L+D+Y +CG E ARE+FD ME R V+SW Sbjct: 191 CTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSW 250 Query: 365 NAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKR 544 N++I +A +G A E++ F +MQ+ G KPNA+TF L+AC H G +DE L +F+SMKR Sbjct: 251 NSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEGLRFFQSMKR 310 Query: 545 DY 550 DY Sbjct: 311 DY 312 Score = 91.7 bits (226), Expect = 2e-18 Identities = 49/174 (28%), Positives = 98/174 (56%), Gaps = 3/174 (1%) Frame = +2 Query: 29 SEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCSNL--GS 202 ++ TS+ +VSW + +++ + + + F M+L+G++P TF+ALL C + GS Sbjct: 4 NQSTSETIVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFPSGS 63 Query: 203 VVAVNEIHREIIKFGI-ASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISWNAIIT 379 + +H K G+ +H+++ ++ +Y+K G + AR +FD M+ ++ ++WN +I Sbjct: 64 ETLGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMID 123 Query: 380 CYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMK 541 Y SG A+ LF +M + P+ I++ A+++ G +EAL++F M+ Sbjct: 124 GYMRSGQVHNAVKLFDKMPE----PDLISWTAMVNGFVKKGFHEEALVWFREMQ 173 >AEP33754.1 chloroplast biogenesis 19, partial [Nasturtium officinale] Length = 447 Score = 176 bits (446), Expect = 5e-50 Identities = 78/179 (43%), Positives = 121/179 (67%) Frame = +2 Query: 14 AEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCSN 193 A KLF EM ++DL+SW M++ + G E+ + +FR MQ+SG+KPD +A L C+N Sbjct: 106 AVKLFDEMLNRDLISWTAMVNGFVKKGFHEEALSWFREMQISGVKPDYVAIIAALAACTN 165 Query: 194 LGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISWNAI 373 LG++ IHR ++ +++ +SN+L+D+Y +CG E AR++FD ME R V+SWN++ Sbjct: 166 LGALSFGLWIHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSV 225 Query: 374 ITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKRDY 550 I +A +G A E++ F +MQ+ G KP+A+TF L+AC H G ++E L YF++MKRDY Sbjct: 226 IVGFAANGNAHESLFYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDY 284 Score = 79.0 bits (193), Expect = 6e-14 Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 35/179 (19%) Frame = +2 Query: 119 FRRMQLSGIKPDAQTFLALLQTCSNL--GSVVAVNEIHREIIKFGI-ASHLIISNTLVDI 289 F M+ +G++P+ TF+ALL C + GS + +H K G+ +H+++ ++ + Sbjct: 6 FSDMRFAGVEPNHITFIALLSGCGDFPSGSEALGDLLHGYACKLGLDRTHVMVGTAILGM 65 Query: 290 YAKCGSTEAAREIFDTME-------------------------------SRDVISWNAII 376 Y+K G AR IFD ME +RD+ISW A++ Sbjct: 66 YSKRGRFRKARLIFDYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISWTAMV 125 Query: 377 TCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEAL-IYFESMKRDY 550 + G EA++ F +MQ SG+KP+ + +A L+AC + G L L I+ M +D+ Sbjct: 126 NGFVKKGFHEEALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVMSQDF 184 Score = 70.9 bits (172), Expect = 4e-11 Identities = 40/155 (25%), Positives = 81/155 (52%), Gaps = 3/155 (1%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 +E A ++F +M + +VSWN+++ +A NG+ +++ +FR+MQ G KPDA TF L Sbjct: 204 VEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLFYFRKMQEEGFKPDAVTFTGALTA 263 Query: 185 CSNLGSVVAVNEIHREIIK-FGIASHLIISNTLVDIYAKCGSTEAAREIFDT--MESRDV 355 CS++G V + + + + I+ + +VD+Y++ G E A ++ + M+ +V Sbjct: 264 CSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCIVDLYSRAGRLEDALKVVQSMPMKPNEV 323 Query: 356 ISWNAIITCYANSGGATEAIALFHQMQQSGIKPNA 460 + + + C + A L + +K ++ Sbjct: 324 VIGSLLAACKNHGNNTLLAERLMKHLSDLNVKSHS 358 >XP_010475291.1 PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like [Camelina sativa] Length = 503 Score = 177 bits (449), Expect = 5e-50 Identities = 79/182 (43%), Positives = 121/182 (66%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 ++ A KLF EM +DLVSW M++ + G E+ + +FR MQ+SG+KPD +A L Sbjct: 159 VDNAVKLFDEMPERDLVSWTAMINGFVKKGFHEEALVWFREMQISGVKPDYVAIIATLNA 218 Query: 185 CSNLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISW 364 C+NLG++ +HR ++ G +++ +SN+L+D+Y +CG E ARE+FD ME R V+SW Sbjct: 219 CTNLGALSFGLWVHRYVMSQGFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSW 278 Query: 365 NAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKR 544 N+I+ +A +G A E++ F +MQ KP+A+TF L+AC H G ++E L YF++MKR Sbjct: 279 NSIVVGFAANGNAHESLVYFRKMQDEWFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKR 338 Query: 545 DY 550 DY Sbjct: 339 DY 340 Score = 96.3 bits (238), Expect = 6e-20 Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 34/205 (16%) Frame = +2 Query: 8 EEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTC 187 ++ +KL ++ TS+ +VSW + +++ NG + + F M+++G++P+ TF+ALL C Sbjct: 26 QKIQKL-NQSTSETIVSWTSRINLLTRNGRLAEAAKEFTDMRVAGVEPNHITFIALLSGC 84 Query: 188 SNL--GSVVAVNEIHREIIKFGI-ASHLIIS----------------------------- 271 ++ GS + +H K G+ +H+++ Sbjct: 85 GDIHSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRVKKARLVFDYMVDKNSV 144 Query: 272 --NTLVDIYAKCGSTEAAREIFDTMESRDVISWNAIITCYANSGGATEAIALFHQMQQSG 445 NT++D Y + G + A ++FD M RD++SW A+I + G EA+ F +MQ SG Sbjct: 145 TWNTMIDGYMRSGQVDNAVKLFDEMPERDLVSWTAMINGFVKKGFHEEALVWFREMQISG 204 Query: 446 IKPNAITFVAVLSACRHAGNLDEAL 520 +KP+ + +A L+AC + G L L Sbjct: 205 VKPDYVAIIATLNACTNLGALSFGL 229 >XP_010457671.1 PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Camelina sativa] Length = 506 Score = 177 bits (449), Expect = 5e-50 Identities = 77/182 (42%), Positives = 122/182 (67%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 ++ A K+F +M +DL+SW M++ + G E+ + +FR MQ+SG+KPD +A L Sbjct: 162 VDNAVKVFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVKPDYVAIIATLNA 221 Query: 185 CSNLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISW 364 C+NLG++ +HR ++ G +++ +SN+L+D+Y +CG E ARE+FD ME R V+SW Sbjct: 222 CTNLGALSFGLWVHRYVMSQGFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSW 281 Query: 365 NAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKR 544 N++I +A +G A E++ F +MQ G KP+A+TF L+AC H G ++E L YF++MKR Sbjct: 282 NSVIVGFAANGNAHESLVYFRKMQDEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKR 341 Query: 545 DY 550 DY Sbjct: 342 DY 343 Score = 95.9 bits (237), Expect = 8e-20 Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 34/205 (16%) Frame = +2 Query: 8 EEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTC 187 ++ +KL ++ TS+ +VSW + +++ NG + + F M+++G++P+ TF+ALL C Sbjct: 29 QKIQKL-NQSTSETIVSWTSRINLLTRNGRLAEAAKEFTDMRVAGVEPNHITFIALLSGC 87 Query: 188 SNL--GSVVAVNEIHREIIKFGI-ASHLIIS----------------------------- 271 ++ G+ + +H K G+ +H+++ Sbjct: 88 GDIHSGNEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRVKKARLVFDYMVDKNSV 147 Query: 272 --NTLVDIYAKCGSTEAAREIFDTMESRDVISWNAIITCYANSGGATEAIALFHQMQQSG 445 NT++D Y + G + A ++FD M RD+ISW A+I + G EA+ F +MQ SG Sbjct: 148 TWNTMIDGYMRSGQVDNAVKVFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISG 207 Query: 446 IKPNAITFVAVLSACRHAGNLDEAL 520 +KP+ + +A L+AC + G L L Sbjct: 208 VKPDYVAIIATLNACTNLGALSFGL 232 >XP_006417992.1 hypothetical protein EUTSA_v10009524mg [Eutrema salsugineum] ESQ36345.1 hypothetical protein EUTSA_v10009524mg [Eutrema salsugineum] Length = 500 Score = 177 bits (448), Expect = 7e-50 Identities = 76/180 (42%), Positives = 121/180 (67%) Frame = +2 Query: 11 EAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCS 190 +A K+F EM +DL+SW MM+ + G E+ + +FR MQ+SG++PD +A L C+ Sbjct: 164 DAVKMFDEMPDRDLISWTAMMNGFVKKGFHEEALAWFREMQISGVEPDYVAIIAALAACT 223 Query: 191 NLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISWNA 370 NLG++ +HR ++ +++ +SN+L+D+Y +CG E AR++FD ME R V+SWN+ Sbjct: 224 NLGALSFGLWVHRYVMSHDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNS 283 Query: 371 IITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKRDY 550 +I +A +G A E++ F +MQ+ G KP+A+TF L+AC H G ++E L YF++MKRDY Sbjct: 284 VIVGFAANGNADESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDY 343 Score = 90.1 bits (222), Expect = 8e-18 Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 34/198 (17%) Frame = +2 Query: 29 SEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCSNL--GS 202 ++ TS+ VSW + +++ + NG + F M+L+G++P+ TF+ALL C + GS Sbjct: 35 NQSTSETTVSWTSRITLLSRNGRLADAAKEFSDMRLAGVEPNHITFIALLSGCGDFPSGS 94 Query: 203 VVAVNEIHREIIKFGI-ASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISWNAIIT 379 + +H K G+ +H+++ ++ +Y+K G AR +FD ME ++ ++WN +I Sbjct: 95 EALGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRFRKARLVFDYMEDKNSVTWNTMID 154 Query: 380 CYANSGGA-------------------------------TEAIALFHQMQQSGIKPNAIT 466 Y +G EA+A F +MQ SG++P+ + Sbjct: 155 GYMRNGQVYDAVKMFDEMPDRDLISWTAMMNGFVKKGFHEEALAWFREMQISGVEPDYVA 214 Query: 467 FVAVLSACRHAGNLDEAL 520 +A L+AC + G L L Sbjct: 215 IIAALAACTNLGALSFGL 232 Score = 77.0 bits (188), Expect = 3e-13 Identities = 42/155 (27%), Positives = 84/155 (54%), Gaps = 3/155 (1%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 +E A ++F +M + +VSWN+++ +A NG+ ++++ +FR+MQ G KPDA TF L Sbjct: 263 VEFARQVFDKMEKRTVVSWNSVIVGFAANGNADESLVYFRKMQEEGFKPDAVTFTGALTA 322 Query: 185 CSNLGSVVAVNEIHREIIK-FGIASHLIISNTLVDIYAKCGSTEAAREIFDT--MESRDV 355 CS++G V + + + + I+ + LVD+Y++ G E A ++ + M+ +V Sbjct: 323 CSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEV 382 Query: 356 ISWNAIITCYANSGGATEAIALFHQMQQSGIKPNA 460 + + + C N A A + + + +K ++ Sbjct: 383 VIGSLLAACRTNGNNAELAERMMKHLSELNVKSHS 417 >JAU82171.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Noccaea caerulescens] Length = 481 Score = 176 bits (445), Expect = 1e-49 Identities = 76/180 (42%), Positives = 121/180 (67%) Frame = +2 Query: 11 EAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCS 190 +A KLF EM +DL+SW M++ + G E+ + +FR MQ+SG+KPD +A L C+ Sbjct: 144 DAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAACT 203 Query: 191 NLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISWNA 370 NLG++ +HR ++ +++ +SN+L+D+Y +CG E AR++FD ME R V+SWN+ Sbjct: 204 NLGALSFGLWVHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDQMEKRTVVSWNS 263 Query: 371 IITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKRDY 550 +I +A +G A E++ F +MQ+ G KP+A+TF L+AC H G ++E L YF++MKRD+ Sbjct: 264 VILGFAANGNANESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDH 323 Score = 91.7 bits (226), Expect = 2e-18 Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 34/198 (17%) Frame = +2 Query: 29 SEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCSNL--GS 202 ++ TS VSW + +++ + NG + + F M+L+G++P+ TF+ALL C + GS Sbjct: 15 NQSTSGTTVSWTSRITLLSRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFPSGS 74 Query: 203 VVAVNEIHREIIKFGIA-SHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISWNAIIT 379 + +H K G+A +H+++ ++ +Y+K G AR +FD ME ++ ++WN +I Sbjct: 75 EALGDLLHGYACKLGLARNHVMVGTVILGMYSKRGRFCKARLVFDYMEDKNSVTWNTMID 134 Query: 380 CYANSGGA-------------------------------TEAIALFHQMQQSGIKPNAIT 466 Y +G EA+A F +MQ SG+KP+ + Sbjct: 135 GYMRNGQVYDAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVA 194 Query: 467 FVAVLSACRHAGNLDEAL 520 +A L+AC + G L L Sbjct: 195 IIAALAACTNLGALSFGL 212 Score = 72.0 bits (175), Expect = 2e-11 Identities = 41/155 (26%), Positives = 81/155 (52%), Gaps = 3/155 (1%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 +E A ++F +M + +VSWN+++ +A NG+ +++ +FR+MQ G KPDA TF L Sbjct: 243 VEFARQVFDQMEKRTVVSWNSVILGFAANGNANESLVYFRKMQEEGFKPDAVTFTGALTA 302 Query: 185 CSNLGSVVAVNEIHREIIK-FGIASHLIISNTLVDIYAKCGSTEAAREIFDT--MESRDV 355 CS++G V + + + I+ + LVD+Y++ G E A ++ + M+ +V Sbjct: 303 CSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEV 362 Query: 356 ISWNAIITCYANSGGATEAIALFHQMQQSGIKPNA 460 + + + C + A L + + +K ++ Sbjct: 363 VIGSLLAACRTHGNDTELAERLMKHLSELNVKSHS 397 >JAU43373.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Noccaea caerulescens] Length = 509 Score = 176 bits (446), Expect = 2e-49 Identities = 76/180 (42%), Positives = 121/180 (67%) Frame = +2 Query: 11 EAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCS 190 +A KLF EM +DL+SW M++ + G E+ + +FR MQ+SG+KPD +A L C+ Sbjct: 167 DAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAACT 226 Query: 191 NLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISWNA 370 NLG++ +HR ++ +++ +SN+L+D+Y +CG E AR++FD ME R V+SWN+ Sbjct: 227 NLGALSFGLWVHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDQMEKRTVVSWNS 286 Query: 371 IITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKRDY 550 +I +A +G A E++ F +MQ+ G KP+A+TF L+AC H G ++E L YF++MKRD+ Sbjct: 287 VIVGFAANGNANESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDH 346 Score = 91.7 bits (226), Expect = 2e-18 Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 34/198 (17%) Frame = +2 Query: 29 SEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCSNL--GS 202 ++ TS VSW + +++ + NG + + F M+L+G++P+ TF+ALL C + GS Sbjct: 38 NQSTSGTTVSWTSRITLLSRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFPSGS 97 Query: 203 VVAVNEIHREIIKFGIA-SHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISWNAIIT 379 + +H K G+A +H+++ ++ +Y+K G AR +FD ME ++ ++WN +I Sbjct: 98 EALGDLLHGYACKLGLARNHVMVGTVILGMYSKRGRFCKARLVFDYMEDKNSVTWNTMID 157 Query: 380 CYANSGGA-------------------------------TEAIALFHQMQQSGIKPNAIT 466 Y +G EA+A F +MQ SG+KP+ + Sbjct: 158 GYMRNGQVYDAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVA 217 Query: 467 FVAVLSACRHAGNLDEAL 520 +A L+AC + G L L Sbjct: 218 IIAALAACTNLGALSFGL 235 Score = 72.0 bits (175), Expect = 2e-11 Identities = 41/155 (26%), Positives = 81/155 (52%), Gaps = 3/155 (1%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 +E A ++F +M + +VSWN+++ +A NG+ +++ +FR+MQ G KPDA TF L Sbjct: 266 VEFARQVFDQMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQEEGFKPDAVTFTGALTA 325 Query: 185 CSNLGSVVAVNEIHREIIK-FGIASHLIISNTLVDIYAKCGSTEAAREIFDT--MESRDV 355 CS++G V + + + I+ + LVD+Y++ G E A ++ + M+ +V Sbjct: 326 CSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEV 385 Query: 356 ISWNAIITCYANSGGATEAIALFHQMQQSGIKPNA 460 + + + C + A L + + +K ++ Sbjct: 386 VIGSLLAACRTHGNDTELAERLMKHLSELNVKSHS 420 >AEP33749.1 chloroplast biogenesis 19, partial [Crucihimalaya wallichii] Length = 491 Score = 174 bits (442), Expect = 4e-49 Identities = 75/182 (41%), Positives = 122/182 (67%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 ++ A K+F +M +DL+SW M++ + G E+ + +FR MQ+SG++PD +A L Sbjct: 147 VDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVAIIAALNA 206 Query: 185 CSNLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISW 364 C+NLG++ +HR ++ +++ +SN+L+D+Y +CG E ARE+FD ME R V+SW Sbjct: 207 CTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSW 266 Query: 365 NAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKR 544 N++I +A +G A E++ F +MQ+ G KP+A+TF L+AC H G ++E L YF++MKR Sbjct: 267 NSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKR 326 Query: 545 DY 550 DY Sbjct: 327 DY 328 Score = 98.6 bits (244), Expect = 8e-21 Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 35/209 (16%) Frame = +2 Query: 29 SEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCSNL--GS 202 ++ TS+ VSW + +++ NG + + F M+LSG++P+ TF+ALL C + GS Sbjct: 20 NQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFPSGS 79 Query: 203 VVAVNEIHREIIKFGI-ASHLIISNTLVDIYAKCGSTEAAREIFDTME------------ 343 N +H K G+ +H+++ ++ +Y+K G + AR +FD ME Sbjct: 80 ETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMID 139 Query: 344 -------------------SRDVISWNAIITCYANSGGATEAIALFHQMQQSGIKPNAIT 466 RD+ISW A+I + G EA+ F +MQ SG++P+ + Sbjct: 140 GYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVA 199 Query: 467 FVAVLSACRHAGNLDEAL-IYFESMKRDY 550 +A L+AC + G L L ++ M +D+ Sbjct: 200 IIAALNACTNLGALSFGLWVHRYVMNQDF 228 Score = 77.4 bits (189), Expect = 2e-13 Identities = 42/155 (27%), Positives = 83/155 (53%), Gaps = 3/155 (1%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 +E A ++F +M + +VSWN+++ +A NG+ +++ +FR+MQ G KPDA TF L Sbjct: 248 VEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTA 307 Query: 185 CSNLGSVVAVNEIHREIIK-FGIASHLIISNTLVDIYAKCGSTEAAREIFDT--MESRDV 355 CS++G V + + + +GI+ + LVD+Y++ G E A ++ ++ M+ +V Sbjct: 308 CSHVGLVEEGLRYFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESMPMKPNEV 367 Query: 356 ISWNAIITCYANSGGATEAIALFHQMQQSGIKPNA 460 + + + C + A L + +K ++ Sbjct: 368 VIGSLLAACRTHGNNTVLAERLMKHLSDLNVKSHS 402 >AEP33748.1 chloroplast biogenesis 19, partial [Capsella bursa-pastoris] Length = 489 Score = 174 bits (441), Expect = 6e-49 Identities = 75/182 (41%), Positives = 122/182 (67%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 ++ A K+F +M +DL+SW M++ + G E+ + +FR MQ+SG+KPD +A L Sbjct: 145 VDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALNA 204 Query: 185 CSNLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISW 364 C+NLG++ +HR ++ +++ +SN+L+D+Y +CG E ARE+FD ME R V+SW Sbjct: 205 CTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSW 264 Query: 365 NAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKR 544 N++I +A +G A E++ F +MQ+ G KP+A+TF L+AC H G ++E L YF++MKR Sbjct: 265 NSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKR 324 Query: 545 DY 550 D+ Sbjct: 325 DH 326 Score = 90.5 bits (223), Expect = 6e-18 Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 35/209 (16%) Frame = +2 Query: 29 SEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCSNL--GS 202 ++ TS+ +VSW + +++ NG + + F M+L+G++P+ TF+ALL C + GS Sbjct: 18 NQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFSSGS 77 Query: 203 VVAVNEIHREIIKFGI-ASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISWNAIIT 379 + +H K G +H+++ ++ +Y+K + AR +FD ME ++ ++WN +I Sbjct: 78 EALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMID 137 Query: 380 CYANSGGA-------------------------------TEAIALFHQMQQSGIKPNAIT 466 Y +G EA+A F +MQ SG+KP+ + Sbjct: 138 GYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVA 197 Query: 467 FVAVLSACRHAGNLDEAL-IYFESMKRDY 550 +A L+AC + G L L ++ M +D+ Sbjct: 198 IIAALNACTNLGALSFGLWVHRYVMSQDF 226 >AEP33746.1 chloroplast biogenesis 19, partial [Barbarea verna] Length = 494 Score = 174 bits (440), Expect = 9e-49 Identities = 76/182 (41%), Positives = 121/182 (66%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 + A KLF EM +DL+SW M++ + G E+ + +FR MQ+SG+KPD +A L Sbjct: 150 VNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAA 209 Query: 185 CSNLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISW 364 C++LG++ +HR ++ +++ +SN+L+D+Y +CG E ARE+FD ME R V+SW Sbjct: 210 CTHLGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSW 269 Query: 365 NAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKR 544 N++I +A +G A E++ F +MQ+ G KP+A+TF L+AC H G ++E L YF++MKR Sbjct: 270 NSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKR 329 Query: 545 DY 550 D+ Sbjct: 330 DH 331 Score = 97.1 bits (240), Expect = 3e-20 Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 35/209 (16%) Frame = +2 Query: 29 SEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCSNL--GS 202 ++ TS+ VSW + +++ + NG + + F M+L+G++P+ TF+ALL C ++ GS Sbjct: 23 NQSTSETTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGCGDVSSGS 82 Query: 203 VVAVNEIHREIIKFGI-ASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISWNAIIT 379 + +H K G+ +H+++ ++ +Y+K G AR +FD ME ++ ++WN +I Sbjct: 83 EALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWNTMID 142 Query: 380 CYANSGGAT-------------------------------EAIALFHQMQQSGIKPNAIT 466 Y SG EA+A F +MQ SG+KP+ + Sbjct: 143 GYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVA 202 Query: 467 FVAVLSACRHAGNLDEAL-IYFESMKRDY 550 +A L+AC H G L L ++ M +D+ Sbjct: 203 IIAALAACTHLGALSFGLWVHRYVMNQDF 231 >AEP33744.1 chloroplast biogenesis 19, partial [Aethionema grandiflorum] Length = 413 Score = 171 bits (433), Expect = 2e-48 Identities = 75/182 (41%), Positives = 119/182 (65%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 ++ A KLF EM DL+SW M++ + G E+ + +FR MQ+SG+KPD +A L Sbjct: 102 VDRAVKLFDEMPDPDLISWTAMINGFVKKGFHEEALVWFREMQISGVKPDYVAIIAALAA 161 Query: 185 CSNLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISW 364 C+NLG++ +HR ++ +++ ++N+L+D+Y +CG E ARE+FD ME R V+SW Sbjct: 162 CTNLGALSFGLWVHRYVLSQDFKNNVRVNNSLIDLYCRCGCVEFAREVFDKMEKRTVVSW 221 Query: 365 NAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKR 544 N++I A +G A E++ F +MQ+ G P+A+TF L+AC H G ++E + YF++MKR Sbjct: 222 NSVIVGSAANGNAHESLVYFRKMQEEGFNPDAVTFTGALTACSHVGLVEEGIQYFQTMKR 281 Query: 545 DY 550 DY Sbjct: 282 DY 283 Score = 77.0 bits (188), Expect = 3e-13 Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 34/165 (20%) Frame = +2 Query: 128 MQLSGIKPDAQTFLALLQTCSNL--GSVVAVNEIHREIIKFGI-ASHLIIS--------- 271 M+L+G +P+ TF+AL+ C + GS + +H K G+ +H+++ Sbjct: 8 MRLAGFEPNHITFIALISGCGDFPTGSETLGDLLHGYACKLGLDRTHVMVGTAILGMYSK 67 Query: 272 ----------------------NTLVDIYAKCGSTEAAREIFDTMESRDVISWNAIITCY 385 NT++D Y + G + A ++FD M D+ISW A+I + Sbjct: 68 RCRFGKARCVFDYMEDKNSVTWNTMIDAYMRSGKVDRAVKLFDEMPDPDLISWTAMINGF 127 Query: 386 ANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEAL 520 G EA+ F +MQ SG+KP+ + +A L+AC + G L L Sbjct: 128 VKKGFHEEALVWFREMQISGVKPDYVAIIAALAACTNLGALSFGL 172 >XP_018450521.1 PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like [Raphanus sativus] XP_018450524.1 PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Raphanus sativus] Length = 501 Score = 172 bits (437), Expect = 3e-48 Identities = 75/182 (41%), Positives = 122/182 (67%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 +++A KLF EM +DL+SW M++ + G E+ + +FR MQ+SG++PD +A L Sbjct: 158 VDDAAKLFDEMPERDLISWTAMINGFVKKGLNEEALAWFREMQVSGVEPDYVAIIAALAA 217 Query: 185 CSNLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISW 364 C+NLG++ +HR ++ +++ +SN+L+D+Y +CG E AR++FD ME R V+SW Sbjct: 218 CTNLGALSFGLWVHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSW 277 Query: 365 NAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKR 544 N++I +A +G A E++ F +MQ+ KP+A+TF L+AC H G ++E + YFE+MKR Sbjct: 278 NSVIVGFAANGHAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEGVRYFEAMKR 337 Query: 545 DY 550 DY Sbjct: 338 DY 339 Score = 82.0 bits (201), Expect = 6e-15 Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 32/196 (16%) Frame = +2 Query: 29 SEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCSNLGSVV 208 ++ T + VSW + +++ + NG + F M+L+G++P+ T +ALL CS+ + Sbjct: 35 NQSTPETTVSWTSRITLLSRNGRLADAAKEFSAMRLAGVEPNHITLIALLSGCSDCEPLG 94 Query: 209 AVNEIHREIIKFGI-ASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISWNAIITCY 385 + +H K G+ +H+++ ++ +Y+K AR +FD M R+ ++WN +I Y Sbjct: 95 --DSLHGYACKLGLDRNHVMVGTAILGMYSKRRRFRKARLVFDHMGDRNSVTWNTMIDGY 152 Query: 386 ANSGGA-------------------------------TEAIALFHQMQQSGIKPNAITFV 472 SG EA+A F +MQ SG++P+ + + Sbjct: 153 MRSGRVDDAAKLFDEMPERDLISWTAMINGFVKKGLNEEALAWFREMQVSGVEPDYVAII 212 Query: 473 AVLSACRHAGNLDEAL 520 A L+AC + G L L Sbjct: 213 AALAACTNLGALSFGL 228 >AEP33747.1 chloroplast biogenesis 19, partial [Brassica oleracea] Length = 485 Score = 172 bits (436), Expect = 3e-48 Identities = 75/182 (41%), Positives = 122/182 (67%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 +++A K+F EM +DL+SW M++ + G E+ + +FR MQ+SG+KPD +A L Sbjct: 145 VDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDYVAVIAALAA 204 Query: 185 CSNLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISW 364 C+NLG++ +HR ++ +++ +SN+L+D+Y +CG E AR++FD ME R V+SW Sbjct: 205 CANLGALSFGLWVHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDEMEKRTVVSW 264 Query: 365 NAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKR 544 N++I +A +G A E++ F +MQ+ KP+A+TF L+AC H G ++E + YFE+MKR Sbjct: 265 NSVIVGFAANGHAHESLVYFRRMQEERFKPDAVTFTGALTACSHVGLVEEGVRYFEAMKR 324 Query: 545 DY 550 DY Sbjct: 325 DY 326 Score = 91.7 bits (226), Expect = 2e-18 Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 30/194 (15%) Frame = +2 Query: 29 SEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCS------ 190 ++ TS+ VSW + +++ + NG + + F M+L+G++P+ T +ALL C+ Sbjct: 22 NQSTSETTVSWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCADCEPFG 81 Query: 191 -NLGSVVAVNEIHREIIKFGIA-----------------------SHLIISNTLVDIYAK 298 +L + R + G A + + NT++D Y + Sbjct: 82 DSLHGYACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVTWNTMIDGYMR 141 Query: 299 CGSTEAAREIFDTMESRDVISWNAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAV 478 G + A ++FD M RD+ISW A+I + G EA+A F +MQ SG+KP+ + +A Sbjct: 142 SGRVDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDYVAVIAA 201 Query: 479 LSACRHAGNLDEAL 520 L+AC + G L L Sbjct: 202 LAACANLGALSFGL 215 >XP_002282081.2 PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like [Vitis vinifera] Length = 541 Score = 173 bits (438), Expect = 4e-48 Identities = 86/182 (47%), Positives = 117/182 (64%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 + A +F EM K + SW ++S YA G +EFFRRMQ+ GI+PD + +++L Sbjct: 199 MRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPA 258 Query: 185 CSNLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISW 364 C+ LG++ IH K G ++ + N L+++YAKCGS + R +FD M RDVISW Sbjct: 259 CAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISW 318 Query: 365 NAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKR 544 + +I AN G A EAI LF +MQ++ I+PN ITFV +LSAC HAG L+E L YFESMKR Sbjct: 319 STMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKR 378 Query: 545 DY 550 DY Sbjct: 379 DY 380 Score = 93.6 bits (231), Expect = 6e-19 Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 36/204 (17%) Frame = +2 Query: 8 EEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQ-----LSGIKPDAQTFLA 172 E A LF + + +N M+ Y HN + +++M + I PD TF Sbjct: 63 EYANLLFKRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPF 122 Query: 173 LLQTCSNLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRD 352 ++++C+ L ++H + KFG S+ ++ N+LV++Y KC S + A ++F+ M RD Sbjct: 123 VVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERD 182 Query: 353 VISWN-------------------------------AIITCYANSGGATEAIALFHQMQQ 439 +SWN AI++ YA G +A+ F +MQ Sbjct: 183 AVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQM 242 Query: 440 SGIKPNAITFVAVLSACRHAGNLD 511 GI+P+ I+ V+VL AC G L+ Sbjct: 243 VGIEPDEISLVSVLPACAQLGALE 266 >XP_013660605.1 PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Brassica napus] CDX86553.1 BnaC08g01500D [Brassica napus] Length = 503 Score = 172 bits (436), Expect = 4e-48 Identities = 75/182 (41%), Positives = 122/182 (67%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 +++A K+F EM +DL+SW M++ + G E+ + +FR MQ+SG+KPD +A L Sbjct: 159 VDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDYVAVIAALAA 218 Query: 185 CSNLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISW 364 C+NLG++ +HR ++ +++ +SN+L+D+Y +CG E AR++FD ME R V+SW Sbjct: 219 CANLGALSFGLWVHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDEMEKRTVVSW 278 Query: 365 NAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKR 544 N++I +A +G A E++ F +MQ+ KP+A+TF L+AC H G ++E + YFE+MKR Sbjct: 279 NSVIVGFAANGHAHESLVYFRRMQEERFKPDAVTFTGALTACSHVGLVEEGVRYFEAMKR 338 Query: 545 DY 550 DY Sbjct: 339 DY 340 Score = 91.7 bits (226), Expect = 2e-18 Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 30/194 (15%) Frame = +2 Query: 29 SEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCS------ 190 ++ TS+ VSW + +++ + NG + + F M+L+G++P+ T +ALL C+ Sbjct: 36 NQSTSETTVSWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCADCEPFG 95 Query: 191 -NLGSVVAVNEIHREIIKFGIA-----------------------SHLIISNTLVDIYAK 298 +L + R + G A + + NT++D Y + Sbjct: 96 DSLHGYACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVTWNTMIDGYMR 155 Query: 299 CGSTEAAREIFDTMESRDVISWNAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAV 478 G + A ++FD M RD+ISW A+I + G EA+A F +MQ SG+KP+ + +A Sbjct: 156 SGRVDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDYVAVIAA 215 Query: 479 LSACRHAGNLDEAL 520 L+AC + G L L Sbjct: 216 LAACANLGALSFGL 229 >JAU27817.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Noccaea caerulescens] Length = 504 Score = 172 bits (436), Expect = 4e-48 Identities = 75/180 (41%), Positives = 119/180 (66%) Frame = +2 Query: 11 EAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCS 190 +A KLF EM +DL+SW M++ + G E+ + +FR MQ+SG+KPD +A L C+ Sbjct: 162 DAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAACT 221 Query: 191 NLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISWNA 370 NLG++ +HR ++ +++ +SN+L+D+Y +CG E AR++FD ME R V SWN+ Sbjct: 222 NLGALSFGLWVHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRSVFSWNS 281 Query: 371 IITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKRDY 550 +I +A +G A E++ +MQ+ G KP+A+TF L+AC H G ++E L YF++MKRD+ Sbjct: 282 VIVGFAANGHANESLVYLRRMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDH 341 Score = 91.7 bits (226), Expect = 2e-18 Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 34/198 (17%) Frame = +2 Query: 29 SEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCSNL--GS 202 ++ TS VSW + +++ + NG + + F M+L+G++P+ TF+ALL C + GS Sbjct: 33 NQSTSGTTVSWTSRITLLSRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFPSGS 92 Query: 203 VVAVNEIHREIIKFGIA-SHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISWNAIIT 379 + +H K G+A +H+++ ++ +Y+K G AR +FD ME ++ ++WN +I Sbjct: 93 EALGDLLHGYACKLGLARNHVMVGTVILGMYSKRGRFCKARLVFDYMEDKNSVTWNTMID 152 Query: 380 CYANSGGA-------------------------------TEAIALFHQMQQSGIKPNAIT 466 Y +G EA+A F +MQ SG+KP+ + Sbjct: 153 GYMRNGQVYDAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVA 212 Query: 467 FVAVLSACRHAGNLDEAL 520 +A L+AC + G L L Sbjct: 213 IIAALAACTNLGALSFGL 230 Score = 68.2 bits (165), Expect = 4e-10 Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 3/155 (1%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 +E A ++F +M + + SWN+++ +A NG +++ + RRMQ G KPDA TF L Sbjct: 261 VEFARQVFDKMEKRSVFSWNSVIVGFAANGHANESLVYLRRMQEEGFKPDAVTFTGALTA 320 Query: 185 CSNLGSVVAVNEIHREIIK-FGIASHLIISNTLVDIYAKCGSTEAAREIFDT--MESRDV 355 CS++G V + + + I+ + LVD+Y++ G E A ++ + M+ +V Sbjct: 321 CSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEV 380 Query: 356 ISWNAIITCYANSGGATEAIALFHQMQQSGIKPNA 460 + + + C + A L + + +K ++ Sbjct: 381 VIGSLLAACRTHGNDTELAERLMKHLSELNVKSHS 415 >AEP33750.1 chloroplast biogenesis 19, partial [Lepidium sativum] Length = 494 Score = 171 bits (434), Expect = 7e-48 Identities = 74/182 (40%), Positives = 118/182 (64%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 ++ A K+F EM +DL+SW M++ + G E+ + +FR MQ+SG+ PD +A L Sbjct: 153 VDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIAALAA 212 Query: 185 CSNLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISW 364 C+NLG++ HR ++ +++ +SN+L+D+Y +CG E AR++FDTME R V+SW Sbjct: 213 CTNLGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDTMEKRTVVSW 272 Query: 365 NAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKR 544 N++I +A +G A E++ F +MQ+ G KP+A+TF L+AC H G ++E YF+ MK Sbjct: 273 NSVIVGFAANGNANESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGFQYFQMMKT 332 Query: 545 DY 550 DY Sbjct: 333 DY 334 Score = 92.0 bits (227), Expect = 2e-18 Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 34/198 (17%) Frame = +2 Query: 29 SEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCSNL--GS 202 ++ TS+ +VSW + +++ + + + F M+L+GI+P+ TF++LL C N GS Sbjct: 26 NQSTSETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFISLLSACGNFPSGS 85 Query: 203 VVAVNEIHREIIKFGI-ASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISWN---- 367 + +H K G+ SH+++ ++ +Y+K G AR +FD ME ++ ++WN Sbjct: 86 EALSDLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYMEDKNSVTWNTMID 145 Query: 368 ---------------------------AIITCYANSGGATEAIALFHQMQQSGIKPNAIT 466 A+IT + G EA+A F +MQ SG+ P+ + Sbjct: 146 GYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVA 205 Query: 467 FVAVLSACRHAGNLDEAL 520 +A L+AC + G L L Sbjct: 206 IIAALAACTNLGALSFGL 223 >OAP12187.1 PDE247 [Arabidopsis thaliana] Length = 500 Score = 171 bits (434), Expect = 8e-48 Identities = 74/182 (40%), Positives = 121/182 (66%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 ++ A K+F +M +DL+SW M++ + G +E+ + +FR MQ+SG+KPD +A L Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215 Query: 185 CSNLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISW 364 C+NLG++ +HR ++ +++ +SN+L+D+Y +CG E AR++FD ME R V+SW Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDNMEKRTVVSW 275 Query: 365 NAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESMKR 544 N++I +A +G A E++ F +MQ+ G KP+A+TF L+AC H G ++E L YF+ MK Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKC 335 Query: 545 DY 550 DY Sbjct: 336 DY 337 Score = 91.7 bits (226), Expect = 2e-18 Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 34/198 (17%) Frame = +2 Query: 29 SEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQTCSNL--GS 202 ++ TS+ VSW + +++ NG + + F M L+G++P+ TF+ALL C + GS Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88 Query: 203 VVAVNEIHREIIKFGI-ASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVISWNAIIT 379 + +H K G+ +H+++ ++ +Y+K G + AR +FD ME ++ ++WN +I Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148 Query: 380 CYANSGGA-------------------------------TEAIALFHQMQQSGIKPNAIT 466 Y SG EA+ F +MQ SG+KP+ + Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208 Query: 467 FVAVLSACRHAGNLDEAL 520 +A L+AC + G L L Sbjct: 209 IIAALNACTNLGALSFGL 226 Score = 70.5 bits (171), Expect = 6e-11 Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 2/169 (1%) Frame = +2 Query: 5 LEEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALLQT 184 +E A ++F M + +VSWN+++ +A NG+ +++ +FR+MQ G KPDA TF L Sbjct: 257 VEFARQVFDNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTA 316 Query: 185 CSNLGSVVAVNEIHREIIK--FGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVI 358 CS++G +V + +I+K + I+ + LVD+Y++ G E A ++ +M Sbjct: 317 CSHVG-LVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMP----- 370 Query: 359 SWNAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGN 505 +KPN + ++L+AC + GN Sbjct: 371 -----------------------------MKPNEVVIGSLLAACSNHGN 390 >CBI20961.3 unnamed protein product, partial [Vitis vinifera] Length = 553 Score = 172 bits (436), Expect = 9e-48 Identities = 86/184 (46%), Positives = 123/184 (66%), Gaps = 2/184 (1%) Frame = +2 Query: 5 LEEAEKLFSEMTSKD--LVSWNTMMSVYAHNGDREQTMEFFRRMQLSGIKPDAQTFLALL 178 L++A ++F EMT +D + SW ++S YA G +EFFRRMQ+ GI+PD + +++L Sbjct: 213 LDDAHRVFEEMTERDATIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVL 272 Query: 179 QTCSNLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRDVI 358 C+ LG++ IH K G ++ + N L+++YAKCGS + R +FD M+ RDVI Sbjct: 273 PDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVI 332 Query: 359 SWNAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLDEALIYFESM 538 SW+ +I AN G A EAI LF +MQ++ I+P+ ITFV +L+AC HAG L+E L YFESM Sbjct: 333 SWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESM 392 Query: 539 KRDY 550 KRDY Sbjct: 393 KRDY 396 Score = 99.0 bits (245), Expect = 7e-21 Identities = 55/175 (31%), Positives = 92/175 (52%), Gaps = 7/175 (4%) Frame = +2 Query: 8 EEAEKLFSEMTSKDLVSWNTMMSVYAHNGDREQTMEFFRRMQ-----LSGIKPDAQTFLA 172 E A LF + + +N M+ Y HN + +++M + I PD TF Sbjct: 108 EYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPF 167 Query: 173 LLQTCSNLGSVVAVNEIHREIIKFGIASHLIISNTLVDIYAKCGSTEAAREIFDTMESRD 352 ++++C+ L ++H + KFG S+ ++ N+LV++Y KC S + A +F+ M RD Sbjct: 168 VVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERD 227 Query: 353 --VISWNAIITCYANSGGATEAIALFHQMQQSGIKPNAITFVAVLSACRHAGNLD 511 + SW AI++ YA G +A+ F +MQ GI+P+ I+ V+VL C G L+ Sbjct: 228 ATIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALE 282