BLASTX nr result
ID: Ephedra29_contig00023767
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00023767
(319 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJP06345.1 RDR1 [Pinus tabuliformis] 109 1e-25
XP_018845228.1 PREDICTED: probable RNA-dependent RNA polymerase ... 89 3e-18
XP_004498237.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform... 89 3e-18
XP_004498236.1 PREDICTED: probable RNA-dependent RNA polymerase ... 89 3e-18
XP_004498314.1 PREDICTED: probable RNA-dependent RNA polymerase ... 88 4e-18
XP_014520611.1 PREDICTED: probable RNA-dependent RNA polymerase ... 87 7e-18
XP_014520609.1 PREDICTED: probable RNA-dependent RNA polymerase ... 87 7e-18
XP_018814631.1 PREDICTED: RNA-dependent RNA polymerase 1-like [J... 87 9e-18
KDO60788.1 hypothetical protein CISIN_1g0025862mg, partial [Citr... 86 2e-17
KDO60787.1 hypothetical protein CISIN_1g0025862mg [Citrus sinensis] 86 2e-17
KDO60785.1 hypothetical protein CISIN_1g0025862mg [Citrus sinens... 86 2e-17
XP_017427515.1 PREDICTED: probable RNA-dependent RNA polymerase ... 86 2e-17
XP_006469265.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform... 86 2e-17
XP_015382841.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform... 86 2e-17
CDP05597.1 unnamed protein product [Coffea canephora] 86 2e-17
XP_015161442.1 PREDICTED: RNA-dependent RNA polymerase 1-like, p... 82 3e-17
XP_015872761.1 PREDICTED: RNA-dependent RNA polymerase 1-like, p... 85 4e-17
XP_003518619.1 PREDICTED: RNA-dependent RNA polymerase 1 [Glycin... 85 4e-17
XP_015871329.1 PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA... 85 6e-17
XP_015869018.1 PREDICTED: RNA-dependent RNA polymerase 1-like, p... 85 6e-17
>AJP06345.1 RDR1 [Pinus tabuliformis]
Length = 1726
Score = 109 bits (273), Expect = 1e-25
Identities = 51/104 (49%), Positives = 70/104 (67%)
Frame = +1
Query: 4 LHSQRNSVAKLKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSNENCDTDDKPLAKGLFY 183
L +R+ VA + +A KL + N ++P DWL ++LK VE SN + PL GL Y
Sbjct: 557 LQPERSDVALINQALEKLGNSGWNTCYRPVDWLQDQLKMVEKSNRYRNAGHTPLENGLMY 616
Query: 184 INKVDVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDEN 315
+N V VTP++IYF PE+ VSNRVLR++A+H ENF+RV+F DEN
Sbjct: 617 VNSVQVTPAKIYFAGPEVNVSNRVLRYYADHAENFIRVAFFDEN 660
>XP_018845228.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Juglans regia]
Length = 1063
Score = 88.6 bits (218), Expect = 3e-18
Identities = 44/101 (43%), Positives = 63/101 (62%)
Frame = +1
Query: 13 QRNSVAKLKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSNENCDTDDKPLAKGLFYINK 192
+R + ++ A KL F+ ++ ++P WL E+ K S L GL YI +
Sbjct: 245 KRIKIQYIESALEKL-FHLKDCCYEPVKWLQEQYKGYAKSTRFQTNPTNSLDYGLVYIRR 303
Query: 193 VDVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDEN 315
V VTPS++YFC PE+ +SNRVLRH+ E I+NFLRVSF+DE+
Sbjct: 304 VQVTPSKVYFCGPEVNLSNRVLRHYREDIDNFLRVSFVDED 344
>XP_004498237.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform X2 [Cicer
arietinum]
Length = 1100
Score = 88.6 bits (218), Expect = 3e-18
Identities = 43/99 (43%), Positives = 65/99 (65%)
Frame = +1
Query: 16 RNSVAKLKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSNENCDTDDKPLAKGLFYINKV 195
R +V ++ A K+ ++ ++ ++P WL ++ + NSN + L GL Y+ +V
Sbjct: 319 RINVDFIEHALEKMYYS-KDFCYEPARWLKDQYRMYLNSNYPLQSPSISLDNGLVYVRRV 377
Query: 196 DVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDE 312
+TP ++YFC PEI VSNRV+RHF EHI+NFLRVSF+DE
Sbjct: 378 QITPCKVYFCGPEINVSNRVVRHFHEHIDNFLRVSFVDE 416
>XP_004498236.1 PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
[Cicer arietinum]
Length = 1126
Score = 88.6 bits (218), Expect = 3e-18
Identities = 43/99 (43%), Positives = 65/99 (65%)
Frame = +1
Query: 16 RNSVAKLKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSNENCDTDDKPLAKGLFYINKV 195
R +V ++ A K+ ++ ++ ++P WL ++ + NSN + L GL Y+ +V
Sbjct: 319 RINVDFIEHALEKMYYS-KDFCYEPARWLKDQYRMYLNSNYPLQSPSISLDNGLVYVRRV 377
Query: 196 DVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDE 312
+TP ++YFC PEI VSNRV+RHF EHI+NFLRVSF+DE
Sbjct: 378 QITPCKVYFCGPEINVSNRVVRHFHEHIDNFLRVSFVDE 416
>XP_004498314.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Cicer
arietinum]
Length = 1135
Score = 88.2 bits (217), Expect = 4e-18
Identities = 45/101 (44%), Positives = 65/101 (64%)
Frame = +1
Query: 13 QRNSVAKLKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSNENCDTDDKPLAKGLFYINK 192
QR A ++ A KL + + ++P WL ++ + ++ + L KGL Y+++
Sbjct: 304 QRIKDAYIESALNKL-YQMKECCYEPIQWLEKEYQRYSTNSSIPLSSTISLDKGLVYVHR 362
Query: 193 VDVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDEN 315
V VTPSRIYFC PE+ +SNRVLR+FA+ +NFLRVSFLDEN
Sbjct: 363 VQVTPSRIYFCGPEVNLSNRVLRNFADDTDNFLRVSFLDEN 403
>XP_014520611.1 PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X2
[Vigna radiata var. radiata]
Length = 1082
Score = 87.4 bits (215), Expect = 7e-18
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = +1
Query: 34 LKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSN-ENCDT-DDKPLAKGLFYINKVDVTP 207
+K A K+ F+ E + P W ++ K SN +NC L KGL Y+ +V +TP
Sbjct: 288 IKNALEKMYFSKE-FCYDPTKWFTDQYKRYLKSNSKNCPRWPAMSLDKGLVYVRRVQITP 346
Query: 208 SRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDE 312
++YFC PE+ VSNRVLRHF EH++NF+RVSF+DE
Sbjct: 347 CKVYFCGPEVNVSNRVLRHFYEHLDNFIRVSFVDE 381
>XP_014520609.1 PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
[Vigna radiata var. radiata] XP_014520610.1 PREDICTED:
probable RNA-dependent RNA polymerase 1 isoform X1
[Vigna radiata var. radiata]
Length = 1116
Score = 87.4 bits (215), Expect = 7e-18
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = +1
Query: 34 LKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSN-ENCDT-DDKPLAKGLFYINKVDVTP 207
+K A K+ F+ E + P W ++ K SN +NC L KGL Y+ +V +TP
Sbjct: 322 IKNALEKMYFSKE-FCYDPTKWFTDQYKRYLKSNSKNCPRWPAMSLDKGLVYVRRVQITP 380
Query: 208 SRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDE 312
++YFC PE+ VSNRVLRHF EH++NF+RVSF+DE
Sbjct: 381 CKVYFCGPEVNVSNRVLRHFYEHLDNFIRVSFVDE 415
>XP_018814631.1 PREDICTED: RNA-dependent RNA polymerase 1-like [Juglans regia]
Length = 1013
Score = 87.0 bits (214), Expect = 9e-18
Identities = 44/102 (43%), Positives = 66/102 (64%)
Frame = +1
Query: 10 SQRNSVAKLKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSNENCDTDDKPLAKGLFYIN 189
S+R V ++ A KL F+ ++ ++P WL E+ K S T L GL Y++
Sbjct: 199 SKRIKVEHIEFALDKL-FHLKDCCYEPVKWLKEQYKGYATSTRLPRTTAISLDDGLVYVH 257
Query: 190 KVDVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDEN 315
+V +TPS++YFC PE+ +SNRVLR++ E I+NFLRVSF+DE+
Sbjct: 258 RVQITPSKVYFCGPEVNLSNRVLRNYPEDIDNFLRVSFVDED 299
>KDO60788.1 hypothetical protein CISIN_1g0025862mg, partial [Citrus sinensis]
Length = 579
Score = 86.3 bits (212), Expect = 2e-17
Identities = 42/98 (42%), Positives = 63/98 (64%)
Frame = +1
Query: 22 SVAKLKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDV 201
S++ ++ A KL ++ + ++P WL ++ + S + L GL Y+++V V
Sbjct: 90 SISCIEHALDKL-YHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQV 148
Query: 202 TPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDEN 315
TPSR+YFC PEI VSNRVLRHF I+NFLR+SF+DE+
Sbjct: 149 TPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDED 186
>KDO60787.1 hypothetical protein CISIN_1g0025862mg [Citrus sinensis]
Length = 607
Score = 86.3 bits (212), Expect = 2e-17
Identities = 42/98 (42%), Positives = 63/98 (64%)
Frame = +1
Query: 22 SVAKLKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDV 201
S++ ++ A KL ++ + ++P WL ++ + S + L GL Y+++V V
Sbjct: 90 SISCIEHALDKL-YHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQV 148
Query: 202 TPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDEN 315
TPSR+YFC PEI VSNRVLRHF I+NFLR+SF+DE+
Sbjct: 149 TPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDED 186
>KDO60785.1 hypothetical protein CISIN_1g0025862mg [Citrus sinensis] KDO60786.1
hypothetical protein CISIN_1g0025862mg [Citrus sinensis]
Length = 724
Score = 86.3 bits (212), Expect = 2e-17
Identities = 42/98 (42%), Positives = 63/98 (64%)
Frame = +1
Query: 22 SVAKLKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDV 201
S++ ++ A KL ++ + ++P WL ++ + S + L GL Y+++V V
Sbjct: 207 SISCIEHALDKL-YHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQV 265
Query: 202 TPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDEN 315
TPSR+YFC PEI VSNRVLRHF I+NFLR+SF+DE+
Sbjct: 266 TPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDED 303
>XP_017427515.1 PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
[Vigna angularis] XP_017427516.1 PREDICTED: probable
RNA-dependent RNA polymerase 1 isoform X1 [Vigna
angularis] XP_017427518.1 PREDICTED: probable
RNA-dependent RNA polymerase 1 isoform X2 [Vigna
angularis] XP_017427519.1 PREDICTED: probable
RNA-dependent RNA polymerase 1 isoform X2 [Vigna
angularis] KOM46252.1 hypothetical protein
LR48_Vigan06g155800 [Vigna angularis] BAT98860.1
hypothetical protein VIGAN_10021500 [Vigna angularis
var. angularis]
Length = 1116
Score = 86.3 bits (212), Expect = 2e-17
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = +1
Query: 34 LKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSN-ENCDT-DDKPLAKGLFYINKVDVTP 207
+K A K+ ++ E + P W ++ K SN +NC L KGL Y+ +V +TP
Sbjct: 322 IKNALEKMYYSKE-FCYDPTKWFTDQYKRYLKSNSKNCPRWPAMSLDKGLVYVRRVQITP 380
Query: 208 SRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDE 312
++YFC PE+ VSNRVLRHF EH++NF+RVSF+DE
Sbjct: 381 CKVYFCGPEVNVSNRVLRHFHEHLDNFIRVSFVDE 415
>XP_006469265.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform X2 [Citrus
sinensis] XP_015382842.1 PREDICTED: RNA-dependent RNA
polymerase 1 isoform X2 [Citrus sinensis]
Length = 1132
Score = 86.3 bits (212), Expect = 2e-17
Identities = 42/98 (42%), Positives = 63/98 (64%)
Frame = +1
Query: 22 SVAKLKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDV 201
S++ ++ A KL ++ + ++P WL ++ + S + L GL Y+++V V
Sbjct: 318 SISCIEHALDKL-YHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQV 376
Query: 202 TPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDEN 315
TPSR+YFC PEI VSNRVLRHF I+NFLR+SF+DE+
Sbjct: 377 TPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDED 414
>XP_015382841.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform X1 [Citrus
sinensis]
Length = 1138
Score = 86.3 bits (212), Expect = 2e-17
Identities = 42/98 (42%), Positives = 63/98 (64%)
Frame = +1
Query: 22 SVAKLKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDV 201
S++ ++ A KL ++ + ++P WL ++ + S + L GL Y+++V V
Sbjct: 324 SISCIEHALDKL-YHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQV 382
Query: 202 TPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDEN 315
TPSR+YFC PEI VSNRVLRHF I+NFLR+SF+DE+
Sbjct: 383 TPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDED 420
>CDP05597.1 unnamed protein product [Coffea canephora]
Length = 1187
Score = 86.3 bits (212), Expect = 2e-17
Identities = 45/102 (44%), Positives = 60/102 (58%)
Frame = +1
Query: 13 QRNSVAKLKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSNENCDTDDKPLAKGLFYINK 192
QR V ++ A KL ++P WL E+ + + LA GL Y+ +
Sbjct: 296 QRIDVKYIEHALEKLH-TLNECCYEPVQWLREQYDKYDKLRRPPKSRALNLADGLVYVRR 354
Query: 193 VDVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDENR 318
V VTP ++YFC PE+ VSNRVLRHF+E+I+NFLRVSF DE R
Sbjct: 355 VQVTPCKVYFCGPEVIVSNRVLRHFSEYIDNFLRVSFTDEER 396
>XP_015161442.1 PREDICTED: RNA-dependent RNA polymerase 1-like, partial [Solanum
tuberosum]
Length = 171
Score = 81.6 bits (200), Expect = 3e-17
Identities = 43/100 (43%), Positives = 62/100 (62%)
Frame = +1
Query: 13 QRNSVAKLKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSNENCDTDDKPLAKGLFYINK 192
QR +VA +++A KL + E + P WL E+ + + L GL Y+ +
Sbjct: 66 QRRNVACIEQALEKLYYLKE-CCYDPVRWLTEQYDGYLKGRQPPKSPSINLDDGLVYVRR 124
Query: 193 VDVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDE 312
V VTP ++YFC PE+ VSNRVLR+++E I+NFLRVSF+DE
Sbjct: 125 VLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDE 164
>XP_015872761.1 PREDICTED: RNA-dependent RNA polymerase 1-like, partial [Ziziphus
jujuba]
Length = 401
Score = 84.7 bits (208), Expect = 4e-17
Identities = 42/100 (42%), Positives = 63/100 (63%)
Frame = +1
Query: 13 QRNSVAKLKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSNENCDTDDKPLAKGLFYINK 192
+RN++A ++ A KL +N + ++P WL E+ + + S N + L GL Y+ +
Sbjct: 139 RRNNIACIEDALDKL-YNLKECCYEPSTWLNEQYRKNKTSKRNPKSSAMSLDDGLVYVRR 197
Query: 193 VDVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDE 312
V +TP ++YF PE VSNRVLR++ IENFLRVSF+DE
Sbjct: 198 VQITPCKVYFYGPEKNVSNRVLRNYPNDIENFLRVSFVDE 237
>XP_003518619.1 PREDICTED: RNA-dependent RNA polymerase 1 [Glycine max]
XP_006574822.1 PREDICTED: RNA-dependent RNA polymerase 1
[Glycine max] XP_006574823.1 PREDICTED: RNA-dependent
RNA polymerase 1 [Glycine max] KHN15461.1 RNA-dependent
RNA polymerase 1 [Glycine soja] KRH70363.1 hypothetical
protein GLYMA_02G086100 [Glycine max]
Length = 1125
Score = 85.1 bits (209), Expect = 4e-17
Identities = 41/93 (44%), Positives = 60/93 (64%)
Frame = +1
Query: 34 LKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSNENCDTDDKPLAKGLFYINKVDVTPSR 213
++ A K+ ++ E ++P WL ++ K S + + L GL Y+ +V +TP +
Sbjct: 321 IEYALEKIYYSKE-FCYEPTKWLTDQYKTYLESKNHPRSPAISLDTGLVYVRRVQITPCK 379
Query: 214 IYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDE 312
+YFC PE+ VSNRVLRHF EHI+NFLRVSF+DE
Sbjct: 380 VYFCGPEMNVSNRVLRHFREHIDNFLRVSFVDE 412
>XP_015871329.1 PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA polymerase
1-like, partial [Ziziphus jujuba]
Length = 854
Score = 84.7 bits (208), Expect = 6e-17
Identities = 42/100 (42%), Positives = 63/100 (63%)
Frame = +1
Query: 13 QRNSVAKLKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSNENCDTDDKPLAKGLFYINK 192
+RN++A ++ A KL +N + ++P WL E+ + + S N + L GL Y+ +
Sbjct: 311 RRNNIACIEDALDKL-YNLKECCYEPSTWLNEQYRKNKTSKRNPKSSAMSLDDGLVYVRR 369
Query: 193 VDVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDE 312
V +TP ++YF PE VSNRVLR++ IENFLRVSF+DE
Sbjct: 370 VQITPCKVYFYGPEKNVSNRVLRNYPNDIENFLRVSFVDE 409
>XP_015869018.1 PREDICTED: RNA-dependent RNA polymerase 1-like, partial [Ziziphus
jujuba]
Length = 854
Score = 84.7 bits (208), Expect = 6e-17
Identities = 42/100 (42%), Positives = 63/100 (63%)
Frame = +1
Query: 13 QRNSVAKLKKAFTKLEFNAENVVHKPFDWLGEKLKAVENSNENCDTDDKPLAKGLFYINK 192
+RN++A ++ A KL +N + ++P WL E+ + + S N + L GL Y+ +
Sbjct: 311 RRNNIACIEDALDKL-YNLKECCYEPSTWLNEQYRKNKTSKRNPKSSAMSLDDGLVYVRR 369
Query: 193 VDVTPSRIYFCRPEIQVSNRVLRHFAEHIENFLRVSFLDE 312
V +TP ++YF PE VSNRVLR++ IENFLRVSF+DE
Sbjct: 370 VQITPCKVYFYGPEKNVSNRVLRNYPNDIENFLRVSFVDE 409