BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00023551
         (220 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_020111934.1 pentatricopeptide repeat-containing protein At1g0...   101   2e-23
OAY72225.1 Pentatricopeptide repeat-containing protein, chloropl...   101   2e-23
JAU04316.1 Pentatricopeptide repeat-containing protein, partial ...    93   3e-23
XP_004301012.1 PREDICTED: pentatricopeptide repeat-containing pr...   100   3e-23
XP_010248664.1 PREDICTED: pentatricopeptide repeat-containing pr...   100   4e-23
XP_007217570.1 hypothetical protein PRUPE_ppa020933mg [Prunus pe...   100   6e-23
JAU84401.1 Pentatricopeptide repeat-containing protein, partial ...    92   9e-23
JAU52990.1 Pentatricopeptide repeat-containing protein, partial ...    93   1e-22
XP_008230807.1 PREDICTED: pentatricopeptide repeat-containing pr...    99   1e-22
XP_016451172.1 PREDICTED: putative pentatricopeptide repeat-cont...    99   1e-22
XP_009610239.1 PREDICTED: putative pentatricopeptide repeat-cont...    99   1e-22
XP_019252275.1 PREDICTED: putative pentatricopeptide repeat-cont...    99   1e-22
XP_016499086.1 PREDICTED: putative pentatricopeptide repeat-cont...    99   1e-22
XP_009789352.1 PREDICTED: putative pentatricopeptide repeat-cont...    99   1e-22
XP_004306124.1 PREDICTED: pentatricopeptide repeat-containing pr...    99   2e-22
KCW84188.1 hypothetical protein EUGRSUZ_B01053 [Eucalyptus grandis]    98   3e-22
XP_008239334.1 PREDICTED: pentatricopeptide repeat-containing pr...    98   3e-22
XP_012066783.1 PREDICTED: pentatricopeptide repeat-containing pr...    98   3e-22
XP_010034854.1 PREDICTED: pentatricopeptide repeat-containing pr...    98   3e-22
XP_011623452.1 PREDICTED: pentatricopeptide repeat-containing pr...    98   4e-22

>XP_020111934.1 pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Ananas comosus] XP_020111936.1
           pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Ananas comosus] XP_020111937.1
           pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Ananas comosus] XP_020111938.1
           pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Ananas comosus] XP_020111939.1
           pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Ananas comosus] XP_020111940.1
           pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Ananas comosus] XP_020111941.1
           pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Ananas comosus] XP_020111942.1
           pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Ananas comosus] XP_020111943.1
           pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Ananas comosus] XP_020111944.1
           pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Ananas comosus]
          Length = 700

 Score =  101 bits (252), Expect = 2e-23
 Identities = 47/69 (68%), Positives = 56/69 (81%)
 Frame = +3

Query: 12  DTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQDFI 191
           D TF+ VL+ACSH+GLV+EGRE+F SM   FGI PRIEHY  +VD+LGRAG  QEA  FI
Sbjct: 429 DVTFVGVLSACSHAGLVKEGREFFNSMSRDFGIEPRIEHYGCLVDILGRAGLLQEAYQFI 488

Query: 192 KSMPLEPNA 218
           K+MP+EPNA
Sbjct: 489 KNMPIEPNA 497


>OAY72225.1 Pentatricopeptide repeat-containing protein, chloroplastic [Ananas
           comosus]
          Length = 700

 Score =  101 bits (252), Expect = 2e-23
 Identities = 47/69 (68%), Positives = 56/69 (81%)
 Frame = +3

Query: 12  DTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQDFI 191
           D TF+ VL+ACSH+GLV+EGRE+F SM   FGI PRIEHY  +VD+LGRAG  QEA  FI
Sbjct: 429 DVTFVGVLSACSHAGLVKEGREFFNSMSRDFGIEPRIEHYGCLVDILGRAGLLQEAYQFI 488

Query: 192 KSMPLEPNA 218
           K+MP+EPNA
Sbjct: 489 KNMPIEPNA 497


>JAU04316.1 Pentatricopeptide repeat-containing protein, partial [Noccaea
           caerulescens]
          Length = 80

 Score = 92.8 bits (229), Expect = 3e-23
 Identities = 44/69 (63%), Positives = 52/69 (75%)
 Frame = +3

Query: 9   DDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQDF 188
           D+ T LAVL+AC+H GLVEEGR WF  M+  FG+  +IEHY  MVDLLGRAG  +EA+D 
Sbjct: 3   DEVTMLAVLSACNHGGLVEEGRRWFHRMEE-FGLIAKIEHYGCMVDLLGRAGQLEEAEDL 61

Query: 189 IKSMPLEPN 215
           I SMP EPN
Sbjct: 62  ITSMPFEPN 70


>XP_004301012.1 PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Fragaria vesca subsp. vesca]
          Length = 704

 Score =  100 bits (250), Expect = 3e-23
 Identities = 47/72 (65%), Positives = 58/72 (80%)
 Frame = +3

Query: 3   RADDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQ 182
           + +D TFLAVL+ACSH+GLVEEGR  F SM   FGI PRIEHY +MVD+LGRAG  +EA 
Sbjct: 428 KPNDVTFLAVLSACSHAGLVEEGRNLFVSMNKDFGIEPRIEHYGSMVDILGRAGLIEEAY 487

Query: 183 DFIKSMPLEPNA 218
            FI++MP++PNA
Sbjct: 488 QFIRNMPIQPNA 499


>XP_010248664.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Nelumbo nucifera]
          Length = 698

 Score =  100 bits (249), Expect = 4e-23
 Identities = 47/70 (67%), Positives = 55/70 (78%)
 Frame = +3

Query: 9   DDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQDF 188
           +D TF+ VL+ACSH GLVEEGR +F SM   FGI PRIEHY  MVD+LGRAG  +EA  F
Sbjct: 426 NDVTFIGVLSACSHGGLVEEGRSFFISMSRDFGIEPRIEHYGCMVDILGRAGLIEEAYQF 485

Query: 189 IKSMPLEPNA 218
           IK+MP+EPNA
Sbjct: 486 IKNMPIEPNA 495


>XP_007217570.1 hypothetical protein PRUPE_ppa020933mg [Prunus persica] ONI19196.1
           hypothetical protein PRUPE_3G263400 [Prunus persica]
          Length = 633

 Score =  100 bits (248), Expect = 6e-23
 Identities = 43/71 (60%), Positives = 57/71 (80%)
 Frame = +3

Query: 3   RADDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQ 182
           + DD TF A+L+ACSHSGLVE+GR +F +++A +G+ P+IEHY  MVDLLGRAGH +EA+
Sbjct: 350 KPDDLTFTALLSACSHSGLVEQGRHYFDNLEASYGVTPKIEHYACMVDLLGRAGHLEEAE 409

Query: 183 DFIKSMPLEPN 215
             IK MP+ PN
Sbjct: 410 VLIKKMPMPPN 420


>JAU84401.1 Pentatricopeptide repeat-containing protein, partial [Noccaea
           caerulescens]
          Length = 97

 Score = 92.0 bits (227), Expect = 9e-23
 Identities = 39/70 (55%), Positives = 56/70 (80%)
 Frame = +3

Query: 9   DDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQDF 188
           DD TF+  ++ACSHSGLV+EG + F SM+A +G+ P++EHY  +VDLLGR+G  +EA++ 
Sbjct: 1   DDATFVVTISACSHSGLVQEGLQIFNSMKAVYGMEPKVEHYGCLVDLLGRSGRLEEAEEC 60

Query: 189 IKSMPLEPNA 218
           IK MP++PNA
Sbjct: 61  IKKMPMKPNA 70


>JAU52990.1 Pentatricopeptide repeat-containing protein, partial [Noccaea
           caerulescens]
          Length = 152

 Score = 93.2 bits (230), Expect = 1e-22
 Identities = 40/70 (57%), Positives = 56/70 (80%)
 Frame = +3

Query: 9   DDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQDF 188
           DD TF+  ++ACSHSGLVEEG + F SM+A +G+ P++EHY  +VDLLGR+G  +EA++ 
Sbjct: 22  DDATFVVTISACSHSGLVEEGLQIFNSMKAVYGMEPKVEHYGCLVDLLGRSGRLEEAEEC 81

Query: 189 IKSMPLEPNA 218
           IK MP++PNA
Sbjct: 82  IKKMPMKPNA 91


>XP_008230807.1 PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial [Prunus mume]
          Length = 633

 Score = 99.0 bits (245), Expect = 1e-22
 Identities = 43/71 (60%), Positives = 56/71 (78%)
 Frame = +3

Query: 3   RADDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQ 182
           + DD TF A+L+ACSHSGLVE+GR +F +++A +GI P+IEHY  MVDLLGR GH +EA+
Sbjct: 350 KPDDITFTALLSACSHSGLVEQGRHYFDNLEASYGITPKIEHYACMVDLLGRVGHLEEAE 409

Query: 183 DFIKSMPLEPN 215
             IK MP+ PN
Sbjct: 410 VLIKKMPMPPN 420


>XP_016451172.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 [Nicotiana tabacum]
          Length = 703

 Score = 99.0 bits (245), Expect = 1e-22
 Identities = 44/72 (61%), Positives = 57/72 (79%)
 Frame = +3

Query: 3   RADDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQ 182
           + D  TF+AVLTACSH GLVEEGR +F+SM+A FGI PR+EHY   +DLLGRAG  +EA+
Sbjct: 503 KLDHITFVAVLTACSHIGLVEEGRHFFKSMEADFGIVPRMEHYACAIDLLGRAGRLEEAK 562

Query: 183 DFIKSMPLEPNA 218
           + +K MP +P+A
Sbjct: 563 ELVKGMPFDPDA 574


>XP_009610239.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 [Nicotiana tomentosiformis]
          Length = 703

 Score = 99.0 bits (245), Expect = 1e-22
 Identities = 44/72 (61%), Positives = 57/72 (79%)
 Frame = +3

Query: 3   RADDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQ 182
           + D  TF+AVLTACSH GLVEEGR +F+SM+A FGI PR+EHY   +DLLGRAG  +EA+
Sbjct: 503 KLDHITFVAVLTACSHIGLVEEGRHFFKSMEADFGIVPRMEHYACAIDLLGRAGRLEEAK 562

Query: 183 DFIKSMPLEPNA 218
           + +K MP +P+A
Sbjct: 563 ELVKGMPFDPDA 574


>XP_019252275.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 [Nicotiana attenuata] OIS99549.1 putative
           pentatricopeptide repeat-containing protein [Nicotiana
           attenuata]
          Length = 704

 Score = 99.0 bits (245), Expect = 1e-22
 Identities = 44/72 (61%), Positives = 57/72 (79%)
 Frame = +3

Query: 3   RADDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQ 182
           + D  TF+AVLTACSH GLVEEGR +F+SM+A FGI PR+EHY   +DLLGRAG  +EA+
Sbjct: 504 KLDHITFVAVLTACSHIGLVEEGRHFFKSMEADFGIVPRMEHYACAIDLLGRAGRLEEAK 563

Query: 183 DFIKSMPLEPNA 218
           + +K MP +P+A
Sbjct: 564 ELVKGMPFDPDA 575


>XP_016499086.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 [Nicotiana tabacum]
          Length = 704

 Score = 99.0 bits (245), Expect = 1e-22
 Identities = 44/72 (61%), Positives = 57/72 (79%)
 Frame = +3

Query: 3   RADDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQ 182
           + D  TF+AVLTACSH GLVEEG  +F+SM+A FGI PR+EHY   +DLLGRAGH +EA+
Sbjct: 504 KLDHITFVAVLTACSHIGLVEEGCHFFKSMEADFGIVPRMEHYACAIDLLGRAGHLEEAK 563

Query: 183 DFIKSMPLEPNA 218
           + +K MP +P+A
Sbjct: 564 ELVKGMPFDPDA 575


>XP_009789352.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 [Nicotiana sylvestris]
          Length = 704

 Score = 99.0 bits (245), Expect = 1e-22
 Identities = 44/72 (61%), Positives = 57/72 (79%)
 Frame = +3

Query: 3   RADDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQ 182
           + D  TF+AVLTACSH GLVEEG  +F+SM+A FGI PR+EHY   +DLLGRAGH +EA+
Sbjct: 504 KLDHITFVAVLTACSHIGLVEEGCHFFKSMEADFGIVPRMEHYACAIDLLGRAGHLEEAK 563

Query: 183 DFIKSMPLEPNA 218
           + +K MP +P+A
Sbjct: 564 ELVKGMPFDPDA 575


>XP_004306124.1 PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial [Fragaria vesca subsp. vesca]
          Length = 634

 Score = 98.6 bits (244), Expect = 2e-22
 Identities = 42/71 (59%), Positives = 58/71 (81%)
 Frame = +3

Query: 3   RADDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQ 182
           + DD TF A+L+ACSHSGLVE+GR +F++++A +G+ P IEHY  MVD+LGRAGH +EA+
Sbjct: 350 KPDDLTFTALLSACSHSGLVEQGRHYFQNLEALYGVTPTIEHYACMVDVLGRAGHLEEAE 409

Query: 183 DFIKSMPLEPN 215
             IK+MP+ PN
Sbjct: 410 TLIKTMPMPPN 420


>KCW84188.1 hypothetical protein EUGRSUZ_B01053 [Eucalyptus grandis]
          Length = 685

 Score = 98.2 bits (243), Expect = 3e-22
 Identities = 45/69 (65%), Positives = 56/69 (81%)
 Frame = +3

Query: 9   DDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQDF 188
           DD TF+ +LTACSHSGLVE+GR  F+SM+  +GI P++ HY  +VDLLGRAG  +EA DF
Sbjct: 413 DDVTFVGLLTACSHSGLVEQGRRLFQSMEEVYGISPKVVHYGCVVDLLGRAGLLEEALDF 472

Query: 189 IKSMPLEPN 215
           IKSMP+EPN
Sbjct: 473 IKSMPIEPN 481


>XP_008239334.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Prunus mume]
          Length = 699

 Score = 98.2 bits (243), Expect = 3e-22
 Identities = 46/72 (63%), Positives = 57/72 (79%)
 Frame = +3

Query: 3   RADDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQ 182
           + ++ TF+AVL+ACSH+GLV EGR  F SM   FGI PRIEHY +MVD+LGRAG  +EA 
Sbjct: 425 KPNNVTFIAVLSACSHAGLVNEGRNLFTSMIKDFGIEPRIEHYGSMVDILGRAGLIEEAY 484

Query: 183 DFIKSMPLEPNA 218
            FIKSMP++PNA
Sbjct: 485 QFIKSMPIQPNA 496


>XP_012066783.1 PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Jatropha curcas]
          Length = 800

 Score = 98.2 bits (243), Expect = 3e-22
 Identities = 42/69 (60%), Positives = 54/69 (78%)
 Frame = +3

Query: 9   DDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQDF 188
           DD TF+ +L+ACSHSGLV EG+ WF +M   F I PR+EHY+ M DLL RAGHF+E ++F
Sbjct: 528 DDVTFVCLLSACSHSGLVTEGKHWFNAMGQDFAIIPRMEHYICMADLLSRAGHFEEVRNF 587

Query: 189 IKSMPLEPN 215
           I+ MPLEP+
Sbjct: 588 IEKMPLEPD 596


>XP_010034854.1 PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Eucalyptus grandis]
          Length = 852

 Score = 98.2 bits (243), Expect = 3e-22
 Identities = 45/69 (65%), Positives = 56/69 (81%)
 Frame = +3

Query: 9   DDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQDF 188
           DD TF+ +LTACSHSGLVE+GR  F+SM+  +GI P++ HY  +VDLLGRAG  +EA DF
Sbjct: 580 DDVTFVGLLTACSHSGLVEQGRRLFQSMEEVYGISPKVVHYGCVVDLLGRAGLLEEALDF 639

Query: 189 IKSMPLEPN 215
           IKSMP+EPN
Sbjct: 640 IKSMPIEPN 648


>XP_011623452.1 PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Amborella trichopoda]
          Length = 696

 Score = 97.8 bits (242), Expect = 4e-22
 Identities = 43/71 (60%), Positives = 55/71 (77%)
 Frame = +3

Query: 3   RADDTTFLAVLTACSHSGLVEEGREWFRSMQAGFGIRPRIEHYVTMVDLLGRAGHFQEAQ 182
           + DD TF+ +L+ACSHSGLV EG + F+ M   FGI PR+EHY+  VDLLGR GH QEA 
Sbjct: 422 KPDDITFVCLLSACSHSGLVSEGEQLFKMMGLDFGITPRMEHYICFVDLLGRVGHLQEAH 481

Query: 183 DFIKSMPLEPN 215
           +FI+SMP+EP+
Sbjct: 482 NFIRSMPVEPD 492