BLASTX nr result

ID: Ephedra29_contig00023292 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00023292
         (230 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001775171.1 predicted protein [Physcomitrella patens] EDQ6003...    75   4e-14
XP_001782576.1 predicted protein [Physcomitrella patens] EDQ5256...    71   1e-12
GAQ84192.1 protein with ubiquitin conjugating enzyme domain [Kle...    60   1e-08

>XP_001775171.1 predicted protein [Physcomitrella patens] EDQ60032.1 predicted
           protein [Physcomitrella patens]
          Length = 1110

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 36/76 (47%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
 Frame = -3

Query: 225 LSRQFYCDRELCLFTFEDIGLGFSILQELQDS-ELVEFEIEVAKKACRSQHDIFEPYPSF 49
           ++R   CD +LCL+ FE++GLG S+L E++ S ELVE E+ +A  A  S  D+FEP+P+F
Sbjct: 399 VTRMRTCDEDLCLYRFEELGLGVSVLDEVKSSPELVEVELSLAHTALESARDVFEPFPAF 458

Query: 48  LLKSPEIRKHSRFISD 1
           LL+  EIR  S + S+
Sbjct: 459 LLQDKEIRGRSGWFSN 474


>XP_001782576.1 predicted protein [Physcomitrella patens] EDQ52565.1 predicted
           protein [Physcomitrella patens]
          Length = 939

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = -3

Query: 225 LSRQFYCDRELCLFTFEDIGLGFSILQELQDS-ELVEFEIEVAKKACRSQHDIFEPYPSF 49
           ++R   CD +LCL  FE++GLG S+L E++ S ELVE E+  A  A RS+ D+FEP+P+F
Sbjct: 398 VTRMRTCDSDLCLHLFEELGLGVSVLGEVKSSPELVEMEMAFAAAALRSKRDVFEPFPAF 457

Query: 48  LLKSPEIRKHSRFISD 1
            L+  E+R  S + S+
Sbjct: 458 SLQKDELRLRSGWFSN 473


>GAQ84192.1 protein with ubiquitin conjugating enzyme domain [Klebsormidium
           flaccidum]
          Length = 1078

 Score = 59.7 bits (143), Expect = 1e-08
 Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
 Frame = -3

Query: 207 CDRELCLFTFEDIGLGFSILQE-LQDSELVEFEIEVAKKACRS--QHDIFEPYPSFLLKS 37
           C+ +LCL+ FE++GLG +IL E L+++ELVE E+ +A  A  S     +FEP+PSFLL+ 
Sbjct: 455 CNNDLCLYRFEELGLGAAILPEVLENAELVELELAMAANAAASGRAEAVFEPFPSFLLEG 514

Query: 36  PEIR 25
            E R
Sbjct: 515 RENR 518


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