BLASTX nr result
ID: Ephedra29_contig00022893
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00022893
(246 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX19935.1 coat protein [Nandina mosaic virus] 167 7e-51
ALD19727.1 coat protein, partial [Plantago asiatica mosaic virus] 164 2e-50
CEJ09726.1 coat protein [Plantago asiatica mosaic virus] 164 8e-50
CEQ38551.1 coat protein [Plantago asiatica mosaic virus] CEQ3855... 164 8e-50
CEN56834.1 coat protein [Plantago asiatica mosaic virus] CEQ3854... 164 8e-50
NP_620840.1 capsid protein [Plantago asiatica mosaic virus] Q075... 164 1e-49
BAG12157.1 coat protein [Plantago asiatica mosaic virus] 163 2e-49
BAG12127.1 coat protein [Plantago asiatica mosaic virus] BAG1213... 163 2e-49
AGW45385.1 coat protein [Plantago asiatica mosaic virus] 162 5e-49
CEJ09728.1 coat protein [Plantago asiatica mosaic virus] 162 7e-49
AIU41379.1 coat protein [Plantago asiatica mosaic virus] 161 1e-48
BAG12142.1 coat protein [Plantago asiatica mosaic virus] 160 3e-48
AMN10087.1 coat protein [Plantago asiatica mosaic virus] 154 1e-45
AAW30636.1 coat protein, partial [Tulip virus X] 147 6e-44
ACE62921.1 coat protein [Tulip virus X] 142 4e-41
NP_702992.1 coat protein [Tulip virus X] BAC16789.1 coat protein... 141 7e-41
NP_042699.1 coat protein [Cassava common mosaic virus] AAC54779.... 113 1e-29
NP_077083.1 coat protein [Clover yellow mosaic virus] P16486.1 R... 93 1e-21
BAA00373.1 28.1K protein [Clover yellow mosaic virus] 93 3e-21
AHA91822.1 coat protein [Cassava alphaflexivirus] 92 4e-21
>AAX19935.1 coat protein [Nandina mosaic virus]
Length = 207
Score = 167 bits (422), Expect = 7e-51
Identities = 78/81 (96%), Positives = 81/81 (100%)
Frame = +2
Query: 2 SLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 181
SLAQ+AGVIKVTTTLRKFCR+YAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL
Sbjct: 79 SLAQIAGVIKVTTTLRKFCRFYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 138
Query: 182 LNPAALEPLGGISRTPTPDEV 244
LNPAALEPLGG+SRTPTPDEV
Sbjct: 139 LNPAALEPLGGLSRTPTPDEV 159
>ALD19727.1 coat protein, partial [Plantago asiatica mosaic virus]
Length = 153
Score = 164 bits (415), Expect = 2e-50
Identities = 75/81 (92%), Positives = 81/81 (100%)
Frame = +2
Query: 2 SLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 181
SLAQ+AGV+KVTTTLRKFCR+YAKIIWNARL+RNLPPAGFARANIKFEHRWAGFDFFDGL
Sbjct: 25 SLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFARANIKFEHRWAGFDFFDGL 84
Query: 182 LNPAALEPLGGISRTPTPDEV 244
LNPAALEPLGG++RTPTPDEV
Sbjct: 85 LNPAALEPLGGLTRTPTPDEV 105
>CEJ09726.1 coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 164 bits (415), Expect = 8e-50
Identities = 75/81 (92%), Positives = 81/81 (100%)
Frame = +2
Query: 2 SLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 181
SLAQ+AGV+KVTTTLRKFCR+YAKIIWNARL+RNLPPAGFARANIKFEHRWAGFDFFDGL
Sbjct: 79 SLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFARANIKFEHRWAGFDFFDGL 138
Query: 182 LNPAALEPLGGISRTPTPDEV 244
LNPAALEPLGG++RTPTPDEV
Sbjct: 139 LNPAALEPLGGLTRTPTPDEV 159
>CEQ38551.1 coat protein [Plantago asiatica mosaic virus] CEQ38552.1 coat
protein [Plantago asiatica mosaic virus]
Length = 207
Score = 164 bits (415), Expect = 8e-50
Identities = 75/81 (92%), Positives = 81/81 (100%)
Frame = +2
Query: 2 SLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 181
SLAQ+AGV+KVTTTLRKFCR+YAKIIWNARL+RNLPPAGFARANIKFEHRWAGFDFFDGL
Sbjct: 79 SLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFARANIKFEHRWAGFDFFDGL 138
Query: 182 LNPAALEPLGGISRTPTPDEV 244
LNPAALEPLGG++RTPTPDEV
Sbjct: 139 LNPAALEPLGGLTRTPTPDEV 159
>CEN56834.1 coat protein [Plantago asiatica mosaic virus] CEQ38549.1 coat
protein [Plantago asiatica mosaic virus] CEQ38550.1 coat
protein [Plantago asiatica mosaic virus] CEJ09727.1 coat
protein [Plantago asiatica mosaic virus] AMD78105.1 CP
[Plantago asiatica mosaic virus] AMY62707.1 coat protein
[Plantago asiatica mosaic virus] AMY62712.1 coat protein
[Plantago asiatica mosaic virus] AMY62717.1 coat protein
[Plantago asiatica mosaic virus] AMY62722.1 coat protein
[Plantago asiatica mosaic virus] AMY62727.1 coat protein
[Plantago asiatica mosaic virus] AND01253.1 coat protein
[Plantago asiatica mosaic virus] ANJ21427.1 coat protein
[Plantago asiatica mosaic virus] ANY93291.1 CP [Plantago
asiatica mosaic virus] AOV94187.1 coat protein [Plantago
asiatica mosaic virus] AOV94189.1 coat protein [Plantago
asiatica mosaic virus]
Length = 207
Score = 164 bits (415), Expect = 8e-50
Identities = 75/81 (92%), Positives = 81/81 (100%)
Frame = +2
Query: 2 SLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 181
SLAQ+AGV+KVTTTLRKFCR+YAKIIWNARL+RNLPPAGFARANIKFEHRWAGFDFFDGL
Sbjct: 79 SLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFARANIKFEHRWAGFDFFDGL 138
Query: 182 LNPAALEPLGGISRTPTPDEV 244
LNPAALEPLGG++RTPTPDEV
Sbjct: 139 LNPAALEPLGGLTRTPTPDEV 159
>NP_620840.1 capsid protein [Plantago asiatica mosaic virus] Q07506.1 RecName:
Full=Coat protein; AltName: Full=Capsid protein;
Short=CP CAA79765.1 capsid protein [Plantago asiatica
mosaic virus]
Length = 207
Score = 164 bits (414), Expect = 1e-49
Identities = 76/81 (93%), Positives = 80/81 (98%)
Frame = +2
Query: 2 SLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 181
SLAQ+AGV+KVTTTLRKFCR+YAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL
Sbjct: 79 SLAQIAGVVKVTTTLRKFCRFYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 138
Query: 182 LNPAALEPLGGISRTPTPDEV 244
LNPAALEP GG+SRTPTPDEV
Sbjct: 139 LNPAALEPPGGLSRTPTPDEV 159
>BAG12157.1 coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 163 bits (413), Expect = 2e-49
Identities = 74/81 (91%), Positives = 81/81 (100%)
Frame = +2
Query: 2 SLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 181
SLAQ+AGV+KVTTTLRKFCR+YAKIIWNARL+RNLPPAGFARANIKFEHRWAGFDFFDGL
Sbjct: 79 SLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFARANIKFEHRWAGFDFFDGL 138
Query: 182 LNPAALEPLGGISRTPTPDEV 244
LNPAALEP+GG++RTPTPDEV
Sbjct: 139 LNPAALEPIGGLTRTPTPDEV 159
>BAG12127.1 coat protein [Plantago asiatica mosaic virus] BAG12132.1 coat
protein [Plantago asiatica mosaic virus] BAG12137.1 coat
protein [Plantago asiatica mosaic virus] BAG12147.1 coat
protein [Plantago asiatica mosaic virus] BAG12152.1 coat
protein [Plantago asiatica mosaic virus]
Length = 207
Score = 163 bits (413), Expect = 2e-49
Identities = 74/81 (91%), Positives = 81/81 (100%)
Frame = +2
Query: 2 SLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 181
SLAQ+AGV+KVTTTLRKFCR+YAKIIWNARL+RNLPPAGFARANIKFEHRWAGFDFFDGL
Sbjct: 79 SLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFARANIKFEHRWAGFDFFDGL 138
Query: 182 LNPAALEPLGGISRTPTPDEV 244
LNPAALEP+GG++RTPTPDEV
Sbjct: 139 LNPAALEPIGGLTRTPTPDEV 159
>AGW45385.1 coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 162 bits (410), Expect = 5e-49
Identities = 74/81 (91%), Positives = 80/81 (98%)
Frame = +2
Query: 2 SLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 181
SLAQ+AGV+KVTTTLRKFCR+YAK IWNARL+RNLPPAGFARANIKFEHRWAGFDFFDGL
Sbjct: 79 SLAQIAGVVKVTTTLRKFCRFYAKTIWNARLSRNLPPAGFARANIKFEHRWAGFDFFDGL 138
Query: 182 LNPAALEPLGGISRTPTPDEV 244
LNPAALEPLGG++RTPTPDEV
Sbjct: 139 LNPAALEPLGGLTRTPTPDEV 159
>CEJ09728.1 coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 162 bits (409), Expect = 7e-49
Identities = 74/81 (91%), Positives = 80/81 (98%)
Frame = +2
Query: 2 SLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 181
SLAQ+AGV+KVTTTLRKFCR+YAKIIWNARL+RNLPPAG ARANIKFEHRWAGFDFFDGL
Sbjct: 79 SLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGLARANIKFEHRWAGFDFFDGL 138
Query: 182 LNPAALEPLGGISRTPTPDEV 244
LNPAALEPLGG++RTPTPDEV
Sbjct: 139 LNPAALEPLGGLTRTPTPDEV 159
>AIU41379.1 coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 161 bits (407), Expect = 1e-48
Identities = 74/81 (91%), Positives = 80/81 (98%)
Frame = +2
Query: 2 SLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 181
SLAQ+AGV+KVTTTLRKFCR+YAKIIWNARL+RNLPPAGFARANIKFE RWAGFDFFDGL
Sbjct: 79 SLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFARANIKFEQRWAGFDFFDGL 138
Query: 182 LNPAALEPLGGISRTPTPDEV 244
LNPAALEPLGG++RTPTPDEV
Sbjct: 139 LNPAALEPLGGLTRTPTPDEV 159
>BAG12142.1 coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 160 bits (405), Expect = 3e-48
Identities = 73/81 (90%), Positives = 80/81 (98%)
Frame = +2
Query: 2 SLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 181
SLAQ+AGV+KVTTTLRKFCR+YAKIIWNARL+RNLPPAGFARANIKFEHRWAGFD FDGL
Sbjct: 79 SLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFARANIKFEHRWAGFDSFDGL 138
Query: 182 LNPAALEPLGGISRTPTPDEV 244
LNPAALEP+GG++RTPTPDEV
Sbjct: 139 LNPAALEPIGGLTRTPTPDEV 159
>AMN10087.1 coat protein [Plantago asiatica mosaic virus]
Length = 207
Score = 154 bits (388), Expect = 1e-45
Identities = 70/81 (86%), Positives = 77/81 (95%)
Frame = +2
Query: 2 SLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 181
SLAQ+AGVI+VTT LRKFCR+YAKIIWNARLARNLPPAGFARANIK EHRWAGFDFFDGL
Sbjct: 79 SLAQIAGVIRVTTNLRKFCRFYAKIIWNARLARNLPPAGFARANIKLEHRWAGFDFFDGL 138
Query: 182 LNPAALEPLGGISRTPTPDEV 244
LNPA+LEP GG++R PTPDE+
Sbjct: 139 LNPASLEPPGGLTRIPTPDEI 159
>AAW30636.1 coat protein, partial [Tulip virus X]
Length = 157
Score = 147 bits (372), Expect = 6e-44
Identities = 65/81 (80%), Positives = 77/81 (95%)
Frame = +2
Query: 2 SLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 181
+LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+RNLPPAGFARA +K H+WAGFDFFDGL
Sbjct: 29 TLAQIAGVVKVSTTLRKFCRFYAKLIWNARLSRNLPPAGFARAYVKTGHKWAGFDFFDGL 88
Query: 182 LNPAALEPLGGISRTPTPDEV 244
LNPAALEPLGG++R PTPDE+
Sbjct: 89 LNPAALEPLGGLTREPTPDEI 109
>ACE62921.1 coat protein [Tulip virus X]
Length = 207
Score = 142 bits (358), Expect = 4e-41
Identities = 63/81 (77%), Positives = 75/81 (92%)
Frame = +2
Query: 2 SLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 181
+LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+RN PPAGFARA +K +WAGFDFFDGL
Sbjct: 79 TLAQIAGVVKVSTTLRKFCRFYAKLIWNARLSRNQPPAGFARAYVKTGQKWAGFDFFDGL 138
Query: 182 LNPAALEPLGGISRTPTPDEV 244
LNPAALEPLGG++R PTPDE+
Sbjct: 139 LNPAALEPLGGLTREPTPDEI 159
>NP_702992.1 coat protein [Tulip virus X] BAC16789.1 coat protein [Tulip virus
X]
Length = 207
Score = 141 bits (356), Expect = 7e-41
Identities = 63/81 (77%), Positives = 75/81 (92%)
Frame = +2
Query: 2 SLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGL 181
+LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+RN PPAGFARA +K +WAGFDFFDGL
Sbjct: 79 TLAQLAGVVKVSTTLRKFCRFYAKLIWNARLSRNRPPAGFARAYVKTGQKWAGFDFFDGL 138
Query: 182 LNPAALEPLGGISRTPTPDEV 244
LNPAALEPLGG++R PTPDE+
Sbjct: 139 LNPAALEPLGGLTREPTPDEI 159
>NP_042699.1 coat protein [Cassava common mosaic virus] AAC54779.1 coat protein
[Cassava common mosaic virus] prf||2207297E ORF 5
[Cassava common mosaic virus]
Length = 229
Score = 113 bits (283), Expect = 1e-29
Identities = 51/79 (64%), Positives = 64/79 (81%)
Frame = +2
Query: 8 AQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGLLN 187
A +AG ++ TTLR+FCRYYAKIIWNAR+ N+PPAG+A A+IK E +AGFDFFDG++N
Sbjct: 103 AALAGAVRKHTTLRQFCRYYAKIIWNARVKANIPPAGYANAHIKPEQAFAGFDFFDGVMN 162
Query: 188 PAALEPLGGISRTPTPDEV 244
AALEP GG+ R PTP E+
Sbjct: 163 VAALEPSGGLVREPTPQEI 181
>NP_077083.1 coat protein [Clover yellow mosaic virus] P16486.1 RecName:
Full=Coat protein; AltName: Full=Capsid protein;
Short=CP BAA00375.1 coat protein [Clover yellow mosaic
virus]
Length = 212
Score = 92.8 bits (229), Expect = 1e-21
Identities = 42/79 (53%), Positives = 58/79 (73%)
Frame = +2
Query: 5 LAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGLL 184
L Q+AGV++ +TLR+FCRY+AK+IWN L +N PPA +A N K R+A FDFF+G+
Sbjct: 85 LYQLAGVVRQHSTLRRFCRYFAKVIWNYALRKNQPPANWASQNYKEADRFAAFDFFEGVS 144
Query: 185 NPAALEPLGGISRTPTPDE 241
+ AAL P GG+ R P+P+E
Sbjct: 145 SSAALSPPGGLIREPSPNE 163
>BAA00373.1 28.1K protein [Clover yellow mosaic virus]
Length = 257
Score = 92.8 bits (229), Expect = 3e-21
Identities = 42/79 (53%), Positives = 58/79 (73%)
Frame = +2
Query: 5 LAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGLL 184
L Q+AGV++ +TLR+FCRY+AK+IWN L +N PPA +A N K R+A FDFF+G+
Sbjct: 130 LYQLAGVVRQHSTLRRFCRYFAKVIWNYALRKNQPPANWASQNYKEADRFAAFDFFEGVS 189
Query: 185 NPAALEPLGGISRTPTPDE 241
+ AAL P GG+ R P+P+E
Sbjct: 190 SSAALSPPGGLIREPSPNE 208
>AHA91822.1 coat protein [Cassava alphaflexivirus]
Length = 221
Score = 91.7 bits (226), Expect = 4e-21
Identities = 41/77 (53%), Positives = 54/77 (70%)
Frame = +2
Query: 14 VAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGLLNPA 193
+AG IK TT+R+FC YYAK++WN L N PPA +A+ E ++A FDFFD +L+PA
Sbjct: 102 LAGTIKSVTTMRRFCSYYAKVVWNMLLKENKPPANWAKMGFLEETKFAAFDFFDAVLSPA 161
Query: 194 ALEPLGGISRTPTPDEV 244
ALEP GG+ R PT E+
Sbjct: 162 ALEPKGGLIREPTQLEI 178