BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00022843
         (261 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide ...    81   4e-16
5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide ...    81   5e-16
XP_012441420.1 PREDICTED: pentatricopeptide repeat-containing pr...    80   1e-15
KJB61828.1 hypothetical protein B456_009G384200 [Gossypium raimo...    80   1e-15
XP_002308709.2 hypothetical protein POPTR_0006s28060g [Populus t...    80   1e-15
5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide ...    79   2e-15
5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide ...    79   2e-15
XP_011031446.1 PREDICTED: pentatricopeptide repeat-containing pr...    79   3e-15
XP_016683974.1 PREDICTED: pentatricopeptide repeat-containing pr...    79   4e-15
4PJR_A Chain A, Crystal Structure Of Designed Cppr-nre Protein         77   4e-15
XP_012441381.1 PREDICTED: pentatricopeptide repeat-containing pr...    78   5e-15
XP_006412544.1 hypothetical protein EUTSA_v10024264mg [Eutrema s...    78   5e-15
XP_017604707.1 PREDICTED: protein Rf1, mitochondrial-like [Gossy...    78   5e-15
4OZS_A Chain A, Rna Binding Protein                                    75   7e-15
XP_016685232.1 PREDICTED: putative pentatricopeptide repeat-cont...    78   7e-15
KJB61767.1 hypothetical protein B456_009G379200 [Gossypium raimo...    78   7e-15
XP_012441332.1 PREDICTED: pentatricopeptide repeat-containing pr...    78   7e-15
XP_016738899.1 PREDICTED: pentatricopeptide repeat-containing pr...    78   7e-15
KJB61807.1 hypothetical protein B456_009G384100 [Gossypium raimo...    77   8e-15
KJB61746.1 hypothetical protein B456_009G377400 [Gossypium raimo...    77   9e-15

>5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8g2 In Complex With Its Target Rna U8g2
          Length = 460

 Score = 81.3 bits (199), Expect = 4e-16
 Identities = 40/85 (47%), Positives = 56/85 (65%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TYT LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 218 VEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 277

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 278 DEALKLFEEMVEKGIKPDVVTYNTL 302



 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 78  VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 137

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 138 DEALKLFEEMVEKGIKPDVVTYNTL 162



 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 253 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 312

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 313 DEALKLFEEMVEKGIKPDVVTYNTL 337



 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 288 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 347

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 348 DEALKLFEEMVEKGIKPDVVTYNTL 372



 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 113 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 172

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 173 DEALKLFEEMVEKGIKPDVVTYTTL 197



 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TYT LI   CK G + EAL L++EM +K I+P   T+  LI GL +  + 
Sbjct: 183 VEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKL 242

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 243 DEALKLFEEMVEKGIKPDVVTYNTL 267



 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 38/83 (45%), Positives = 54/83 (65%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 323 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 382

Query: 186 REALRLYDVMLRKGVEPTVYTYR 254
            EAL+L++ M+ KG++P   TYR
Sbjct: 383 DEALKLFEEMVEKGIKPDELTYR 405



 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 38/85 (44%), Positives = 54/85 (63%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+  LI GL +  + 
Sbjct: 148 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKL 207

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 208 DEALKLFEEMVEKGIKPDVVTYTTL 232



 Score = 74.7 bits (182), Expect = 8e-14
 Identities = 36/79 (45%), Positives = 51/79 (64%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           P V+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  +  EAL+L
Sbjct: 49  PTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 108

Query: 204 YDVMLRKGVEPTVYTYRYL 260
           ++ M+ KG++P V TY  L
Sbjct: 109 FEEMVEKGIKPDVVTYNTL 127



 Score = 61.2 bits (147), Expect = 5e-09
 Identities = 30/78 (38%), Positives = 48/78 (61%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           DV  YT ++ A  + G    AL+L+ E+ ++ + PT  T+N LI GL +  +  EAL+L+
Sbjct: 15  DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF 74

Query: 207 DVMLRKGVEPTVYTYRYL 260
           + M+ KG++P V TY  L
Sbjct: 75  EEMVEKGIKPDVVTYNTL 92



 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 26/63 (41%), Positives = 37/63 (58%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+  +++   R  R 
Sbjct: 358 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRF 417

Query: 186 REA 194
            EA
Sbjct: 418 EEA 420


>5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8c2 In Complex With Its Target Rna U8c2
          Length = 460

 Score = 80.9 bits (198), Expect = 5e-16
 Identities = 39/85 (45%), Positives = 57/85 (67%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P+  T+N LI GL +  + 
Sbjct: 183 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKL 242

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P+V TY  L
Sbjct: 243 DEALKLFEEMVEKGIKPSVVTYNTL 267



 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 39/85 (45%), Positives = 56/85 (65%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 148 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 207

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P+V TY  L
Sbjct: 208 DEALKLFEEMVEKGIKPSVVTYNTL 232



 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 78  VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 137

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 138 DEALKLFEEMVEKGIKPDVVTYNTL 162



 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 113 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 172

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 173 DEALKLFEEMVEKGIKPDVVTYNTL 197



 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 288 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 347

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 348 DEALKLFEEMVEKGIKPDVVTYNTL 372



 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 38/83 (45%), Positives = 54/83 (65%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 323 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 382

Query: 186 REALRLYDVMLRKGVEPTVYTYR 254
            EAL+L++ M+ KG++P   TYR
Sbjct: 383 DEALKLFEEMVEKGIKPDELTYR 405



 Score = 77.8 bits (190), Expect = 7e-15
 Identities = 38/85 (44%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   P V+TY  LI   CK G + EAL L++EM +K I+P+  T+N LI GL +  + 
Sbjct: 218 VEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKL 277

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 278 DEALKLFEEMVEKGIKPDVVTYNTL 302



 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 38/85 (44%), Positives = 54/85 (63%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   P V+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 253 VEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 312

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 313 DEALKLFEEMVEKGIKPDVVTYNTL 337



 Score = 74.7 bits (182), Expect = 8e-14
 Identities = 36/79 (45%), Positives = 51/79 (64%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           P V+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  +  EAL+L
Sbjct: 49  PTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 108

Query: 204 YDVMLRKGVEPTVYTYRYL 260
           ++ M+ KG++P V TY  L
Sbjct: 109 FEEMVEKGIKPDVVTYNTL 127



 Score = 61.2 bits (147), Expect = 5e-09
 Identities = 30/78 (38%), Positives = 48/78 (61%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           DV  YT ++ A  + G    AL+L+ E+ ++ + PT  T+N LI GL +  +  EAL+L+
Sbjct: 15  DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF 74

Query: 207 DVMLRKGVEPTVYTYRYL 260
           + M+ KG++P V TY  L
Sbjct: 75  EEMVEKGIKPDVVTYNTL 92



 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 26/63 (41%), Positives = 37/63 (58%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+  +++   R  R 
Sbjct: 358 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRF 417

Query: 186 REA 194
            EA
Sbjct: 418 EEA 420


>XP_012441420.1 PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Gossypium raimondii]
          Length = 624

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 36/77 (46%), Positives = 51/77 (66%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+TY+IL+ AHCK GMV EA  + DEM K+ IEP   T+N L+ G    N   +A R
Sbjct: 322 EPDVVTYSILVDAHCKEGMVSEAEGIVDEMIKRGIEPNVVTYNTLVNGHCLQNEMDKARR 381

Query: 201 LYDVMLRKGVEPTVYTY 251
           ++++M+ KG  P + TY
Sbjct: 382 VFNLMIEKGCAPNIVTY 398



 Score = 66.2 bits (160), Expect = 8e-11
 Identities = 30/78 (38%), Positives = 48/78 (61%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           D++TYT+LI A CK G + +A+++ D M K+ IEP   T++ L+    +     EA  + 
Sbjct: 289 DIVTYTLLIDALCKEGTISKAVEIVDTMRKQGIEPDVVTYSILVDAHCKEGMVSEAEGIV 348

Query: 207 DVMLRKGVEPTVYTYRYL 260
           D M+++G+EP V TY  L
Sbjct: 349 DEMIKRGIEPNVVTYNTL 366



 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 25/77 (32%), Positives = 43/77 (55%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+ ++ LI   C    + EA+ ++DEM +K  +PT   ++ ++KGL +   T  A+R
Sbjct: 147 EPDVVIFSTLINGLCNQSKISEAVCMFDEMIEKGYQPTSIVYSTMLKGLCKTGNTGRAVR 206

Query: 201 LYDVMLRKGVEPTVYTY 251
              +M  +G EP    Y
Sbjct: 207 FLRLMESRGYEPDNVAY 223



 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 29/79 (36%), Positives = 40/79 (50%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           PD+ITYT LI   C  G   EA    +EM   +I     T+  LI  L +     +A+ +
Sbjct: 253 PDIITYTCLIHGMCNLGQQEEATRHLNEMVDNNISLDIVTYTLLIDALCKEGTISKAVEI 312

Query: 204 YDVMLRKGVEPTVYTYRYL 260
            D M ++G+EP V TY  L
Sbjct: 313 VDTMRKQGIEPDVVTYSIL 331



 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 27/80 (33%), Positives = 43/80 (53%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PD + Y+ +I   CK+G++ EAL+L  EM  K I P   T+  LI G+  + +  EA R
Sbjct: 217 EPDNVAYSTVIDCLCKNGLLQEALNLLSEMKVKGIRPDIITYTCLIHGMCNLGQQEEATR 276

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
             + M+   +   + TY  L
Sbjct: 277 HLNEMVDNNISLDIVTYTLL 296



 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 25/80 (31%), Positives = 42/80 (52%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P+V+TY  L+  HC    + +A  +++ M +K   P   T+N +I G  +  R  +A+ 
Sbjct: 357 EPNVVTYNTLVNGHCLQNEMDKARRVFNLMIEKGCAPNIVTYNTMINGYCKGKRLDKAME 416

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           L+  + RKG  P   TY  L
Sbjct: 417 LFHEISRKGPIPDTVTYNTL 436


>KJB61828.1 hypothetical protein B456_009G384200 [Gossypium raimondii]
          Length = 797

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 36/77 (46%), Positives = 51/77 (66%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+TY+IL+ AHCK GMV EA  + DEM K+ IEP   T+N L+ G    N   +A R
Sbjct: 213 EPDVVTYSILVDAHCKEGMVSEAEGIVDEMIKRGIEPNVVTYNTLVNGHCLQNEMDKARR 272

Query: 201 LYDVMLRKGVEPTVYTY 251
           ++++M+ KG  P + TY
Sbjct: 273 VFNLMIEKGCAPNIVTY 289



 Score = 74.7 bits (182), Expect = 9e-14
 Identities = 34/76 (44%), Positives = 48/76 (63%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+TY  L+ AHCK GMV EA D  D M K +IEP   T+N L+ G    N+  +A R
Sbjct: 720 EPDVVTYNTLVDAHCKEGMVSEAEDFVDSMIKLEIEPDVVTYNALVNGHCLRNKMDKARR 779

Query: 201 LYDVMLRKGVEPTVYT 248
           ++++M+ KG  P + T
Sbjct: 780 VFNLMIEKGCAPNIVT 795



 Score = 66.2 bits (160), Expect = 8e-11
 Identities = 30/78 (38%), Positives = 48/78 (61%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           D++TYT+LI A CK G + +A+++ D M K+ IEP   T++ L+    +     EA  + 
Sbjct: 180 DIVTYTLLIDALCKEGTISKAVEIVDTMRKQGIEPDVVTYSILVDAHCKEGMVSEAEGIV 239

Query: 207 DVMLRKGVEPTVYTYRYL 260
           D M+++G+EP V TY  L
Sbjct: 240 DEMIKRGIEPNVVTYNTL 257



 Score = 60.8 bits (146), Expect = 6e-09
 Identities = 30/78 (38%), Positives = 44/78 (56%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           D++TYT+LI A CK G + +A+ + D M K+ IEP   T+N L+    +     EA    
Sbjct: 687 DIVTYTLLIDALCKEGTISKAVQIVDTMRKQGIEPDVVTYNTLVDAHCKEGMVSEAEDFV 746

Query: 207 DVMLRKGVEPTVYTYRYL 260
           D M++  +EP V TY  L
Sbjct: 747 DSMIKLEIEPDVVTYNAL 764



 Score = 58.5 bits (140), Expect = 4e-08
 Identities = 24/77 (31%), Positives = 43/77 (55%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P  +T++ LI   C  G + EA+ ++DEM +K  +P    ++ ++KGL +   T  A+R
Sbjct: 545 EPSAVTFSTLINGLCNQGKISEAVCMFDEMTEKGYQPNLIVYSTVLKGLCKTGNTDRAVR 604

Query: 201 LYDVMLRKGVEPTVYTY 251
              +M  +G EP +  Y
Sbjct: 605 FLRLMESRGYEPNIVAY 621



 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 30/79 (37%), Positives = 42/79 (53%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           PD+ITYT LI   C  G   EA  L +EM   +I     T+  LI  L +     +A+++
Sbjct: 651 PDIITYTCLIHGMCNLGQQEEATRLLNEMADNNISLDIVTYTLLIDALCKEGTISKAVQI 710

Query: 204 YDVMLRKGVEPTVYTYRYL 260
            D M ++G+EP V TY  L
Sbjct: 711 VDTMRKQGIEPDVVTYNTL 729



 Score = 55.1 bits (131), Expect = 7e-07
 Identities = 27/80 (33%), Positives = 43/80 (53%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P+++ Y  +I   CK+G++ EAL+L  EM  K I P   T+  LI G+  + +  EA R
Sbjct: 615 EPNIVAYNTVIDCLCKNGLLQEALNLLSEMKVKGIRPDIITYTCLIHGMCNLGQQEEATR 674

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           L + M    +   + TY  L
Sbjct: 675 LLNEMADNNISLDIVTYTLL 694



 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 25/80 (31%), Positives = 42/80 (52%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P+V+TY  L+  HC    + +A  +++ M +K   P   T+N +I G  +  R  +A+ 
Sbjct: 248 EPNVVTYNTLVNGHCLQNEMDKARRVFNLMIEKGCAPNIVTYNTMINGYCKGKRLDKAME 307

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           L+  + RKG  P   TY  L
Sbjct: 308 LFHEISRKGPIPDTVTYNTL 327


>XP_002308709.2 hypothetical protein POPTR_0006s28060g [Populus trichocarpa]
           EEE92232.2 hypothetical protein POPTR_0006s28060g
           [Populus trichocarpa]
          Length = 1115

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 40/76 (52%), Positives = 49/76 (64%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           PDV+T+TIL+ A CK G + EA DL D M K+ + P   T+N LI GL R NR  +AL L
Sbjct: 367 PDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDL 426

Query: 204 YDVMLRKGVEPTVYTY 251
           +  M   GVEPT YTY
Sbjct: 427 FSNMESLGVEPTAYTY 442



 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 31/79 (39%), Positives = 48/79 (60%)
 Frame = +3

Query: 24   PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
            PD+ +YTIL+   C  G V +AL  ++++ +  ++P    +N +I GLGR  RT EAL L
Sbjct: 963  PDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSL 1022

Query: 204  YDVMLRKGVEPTVYTYRYL 260
            +  M  +G+ P +YTY  L
Sbjct: 1023 FHEMQNRGIVPDLYTYNSL 1041



 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 30/76 (39%), Positives = 41/76 (53%)
 Frame = +3

Query: 24   PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
            PD  TY  LI AH K G + E  DLYDEM  +  +P   T+N +I  L + NR  +A+ L
Sbjct: 823  PDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDL 882

Query: 204  YDVMLRKGVEPTVYTY 251
            Y  ++     PT  T+
Sbjct: 883  YYNLVSGDFSPTPCTF 898



 Score = 57.8 bits (138), Expect = 8e-08
 Identities = 29/80 (36%), Positives = 45/80 (56%)
 Frame = +3

Query: 21   DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
            DPD++ Y ++I    +     EAL L+ EM  + I P  +T+N LI  LG V    EA +
Sbjct: 997  DPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGK 1056

Query: 201  LYDVMLRKGVEPTVYTYRYL 260
            +Y+ +   G++P V+TY  L
Sbjct: 1057 IYEELQFIGLKPNVFTYNAL 1076



 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 29/79 (36%), Positives = 40/79 (50%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           PD +TY +++  + K G V EA+ L  EM K   EP     N LI  L +  R  EA ++
Sbjct: 507 PDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQM 566

Query: 204 YDVMLRKGVEPTVYTYRYL 260
           +  M    + PTV TY  L
Sbjct: 567 FCRMEEMNLAPTVVTYNIL 585



 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 27/80 (33%), Positives = 44/80 (55%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDVI    LI    K G V EA  ++  M + ++ PT  T+N L+ GLG+  + ++A++
Sbjct: 541 EPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQ 600

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           L++ M   G  P   T+  L
Sbjct: 601 LFESMNGHGCSPNTITFNTL 620


>5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U10 In Complex With Its Target Rna U10
          Length = 460

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 78  VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 137

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 138 DEALKLFEEMVEKGIKPDVVTYNTL 162



 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 113 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 172

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 173 DEALKLFEEMVEKGIKPDVVTYNTL 197



 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 148 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 207

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 208 DEALKLFEEMVEKGIKPDVVTYNTL 232



 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 183 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 242

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 243 DEALKLFEEMVEKGIKPDVVTYNTL 267



 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 218 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 277

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 278 DEALKLFEEMVEKGIKPDVVTYNTL 302



 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 253 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 312

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 313 DEALKLFEEMVEKGIKPDVVTYNTL 337



 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 288 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 347

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 348 DEALKLFEEMVEKGIKPDVVTYNTL 372



 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 38/83 (45%), Positives = 54/83 (65%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 323 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 382

Query: 186 REALRLYDVMLRKGVEPTVYTYR 254
            EAL+L++ M+ KG++P   TYR
Sbjct: 383 DEALKLFEEMVEKGIKPDELTYR 405



 Score = 74.7 bits (182), Expect = 8e-14
 Identities = 36/79 (45%), Positives = 51/79 (64%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           P V+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  +  EAL+L
Sbjct: 49  PTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 108

Query: 204 YDVMLRKGVEPTVYTYRYL 260
           ++ M+ KG++P V TY  L
Sbjct: 109 FEEMVEKGIKPDVVTYNTL 127



 Score = 61.2 bits (147), Expect = 5e-09
 Identities = 30/78 (38%), Positives = 48/78 (61%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           DV  YT ++ A  + G    AL+L+ E+ ++ + PT  T+N LI GL +  +  EAL+L+
Sbjct: 15  DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF 74

Query: 207 DVMLRKGVEPTVYTYRYL 260
           + M+ KG++P V TY  L
Sbjct: 75  EEMVEKGIKPDVVTYNTL 92



 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 26/63 (41%), Positives = 37/63 (58%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+  +++   R  R 
Sbjct: 358 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRF 417

Query: 186 REA 194
            EA
Sbjct: 418 EEA 420


>5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8a2 In Complex With Its Target Rna U8a2
          Length = 460

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 78  VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 137

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 138 DEALKLFEEMVEKGIKPDVVTYNTL 162



 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 288 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 347

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 348 DEALKLFEEMVEKGIKPDVVTYNTL 372



 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 113 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 172

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 173 DEALKLFEEMVEKGIKPDVVTYSTL 197



 Score = 78.6 bits (192), Expect = 4e-15
 Identities = 38/85 (44%), Positives = 56/85 (65%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY+ LI   CK G + EAL L++EM +K I+P   T++ LI GL +  + 
Sbjct: 183 VEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKL 242

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 243 DEALKLFEEMVEKGIKPNVVTYNTL 267



 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 38/85 (44%), Positives = 56/85 (65%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   P+V+TY+ LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 218 VEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKL 277

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 278 DEALKLFEEMVEKGIKPDVVTYNTL 302



 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 38/83 (45%), Positives = 54/83 (65%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 323 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 382

Query: 186 REALRLYDVMLRKGVEPTVYTYR 254
            EAL+L++ M+ KG++P   TYR
Sbjct: 383 DEALKLFEEMVEKGIKPDELTYR 405



 Score = 77.4 bits (189), Expect = 9e-15
 Identities = 38/85 (44%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T++ LI GL +  + 
Sbjct: 148 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKL 207

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 208 DEALKLFEEMVEKGIKPNVVTYSTL 232



 Score = 77.4 bits (189), Expect = 9e-15
 Identities = 38/85 (44%), Positives = 55/85 (64%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   P+V+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  + 
Sbjct: 253 VEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 312

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
            EAL+L++ M+ KG++P V TY  L
Sbjct: 313 DEALKLFEEMVEKGIKPDVVTYNTL 337



 Score = 74.7 bits (182), Expect = 8e-14
 Identities = 36/79 (45%), Positives = 51/79 (64%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           P V+TY  LI   CK G + EAL L++EM +K I+P   T+N LI GL +  +  EAL+L
Sbjct: 49  PTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 108

Query: 204 YDVMLRKGVEPTVYTYRYL 260
           ++ M+ KG++P V TY  L
Sbjct: 109 FEEMVEKGIKPDVVTYNTL 127



 Score = 61.2 bits (147), Expect = 5e-09
 Identities = 30/78 (38%), Positives = 48/78 (61%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           DV  YT ++ A  + G    AL+L+ E+ ++ + PT  T+N LI GL +  +  EAL+L+
Sbjct: 15  DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF 74

Query: 207 DVMLRKGVEPTVYTYRYL 260
           + M+ KG++P V TY  L
Sbjct: 75  EEMVEKGIKPDVVTYNTL 92



 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 26/63 (41%), Positives = 37/63 (58%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PDV+TY  LI   CK G + EAL L++EM +K I+P   T+  +++   R  R 
Sbjct: 358 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRF 417

Query: 186 REA 194
            EA
Sbjct: 418 EEA 420


>XP_011031446.1 PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Populus euphratica]
          Length = 1115

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 40/76 (52%), Positives = 49/76 (64%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           PDV+T+TIL+ A CK G + EA DL D M K+ + P   T+N LI GL R NR  +AL L
Sbjct: 367 PDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLICGLLRANRLDDALDL 426

Query: 204 YDVMLRKGVEPTVYTY 251
           +  M   GVEPT YTY
Sbjct: 427 FSNMESLGVEPTAYTY 442



 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 31/79 (39%), Positives = 48/79 (60%)
 Frame = +3

Query: 24   PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
            PD+ +YTIL+   C  G V +AL  ++++ +  ++P    +N +I GLGR  RT EAL L
Sbjct: 963  PDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSL 1022

Query: 204  YDVMLRKGVEPTVYTYRYL 260
            +  M  +G+ P +YTY  L
Sbjct: 1023 FHEMQNRGIVPDLYTYNSL 1041



 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 30/76 (39%), Positives = 41/76 (53%)
 Frame = +3

Query: 24   PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
            PD  TY  LI AH K G + E  DLYDEM  +  +P   T+N +I  L + NR  +A+ L
Sbjct: 823  PDTFTYNSLIDAHGKSGKINELFDLYDEMLARGCKPNTITYNMVISNLVKSNRLDKAMDL 882

Query: 204  YDVMLRKGVEPTVYTY 251
            Y  ++     PT  T+
Sbjct: 883  YYNLVSGDFSPTPCTF 898



 Score = 57.8 bits (138), Expect = 8e-08
 Identities = 29/80 (36%), Positives = 45/80 (56%)
 Frame = +3

Query: 21   DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
            DPD++ Y ++I    +     EAL L+ EM  + I P  +T+N LI  LG V    EA +
Sbjct: 997  DPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGK 1056

Query: 201  LYDVMLRKGVEPTVYTYRYL 260
            +Y+ +   G++P V+TY  L
Sbjct: 1057 IYEELQFIGLKPNVFTYNAL 1076



 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 29/79 (36%), Positives = 40/79 (50%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           PD +TY +++  + K G V EA+ L  EM K   EP     N LI  L +  R  EA ++
Sbjct: 507 PDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQM 566

Query: 204 YDVMLRKGVEPTVYTYRYL 260
           +  M    + PTV TY  L
Sbjct: 567 FCRMEEMNLAPTVVTYNIL 585



 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 27/80 (33%), Positives = 44/80 (55%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDVI    LI    K G V EA  ++  M + ++ PT  T+N L+ GLG+  + ++A++
Sbjct: 541 EPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQ 600

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           L++ M   G  P   T+  L
Sbjct: 601 LFESMKGHGCSPNTITFNTL 620


>XP_016683974.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Gossypium hirsutum]
          Length = 508

 Score = 78.6 bits (192), Expect = 4e-15
 Identities = 35/77 (45%), Positives = 51/77 (66%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+TY  L+ AHCK GMV EA D+ D M K++IEP   T+N L+ G    N+  +A R
Sbjct: 206 EPDVVTYNTLVDAHCKEGMVFEAEDIVDAMIKREIEPDVVTYNILVNGHCLRNKMDKARR 265

Query: 201 LYDVMLRKGVEPTVYTY 251
           ++++M+ KG  P + TY
Sbjct: 266 VFNLMIEKGCAPDIVTY 282



 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 34/80 (42%), Positives = 49/80 (61%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P+V+TYT ++ AHCK GMV EA D+ D M K+ IEP   T+N L+    +     EA  
Sbjct: 171 EPNVVTYTTMVDAHCKEGMVSEAEDIVDAMIKRGIEPDVVTYNTLVDAHCKEGMVFEAED 230

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           + D M+++ +EP V TY  L
Sbjct: 231 IVDAMIKREIEPDVVTYNIL 250



 Score = 58.2 bits (139), Expect = 6e-08
 Identities = 24/77 (31%), Positives = 43/77 (55%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+ ++ LI   C    + EA+ ++DEM +K  +P    ++ ++KGL +   T  A+R
Sbjct: 7   EPDVVIFSTLISGLCNQTKISEAVCMFDEMTEKGYQPNLIVYSTVLKGLSKTGNTDRAVR 66

Query: 201 LYDVMLRKGVEPTVYTY 251
              +M  +G EP +  Y
Sbjct: 67  FLRLMESRGFEPNIVAY 83



 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 24/101 (23%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P+++ Y+ +I   CK+G++ EALDL+ E+  K I P   T+  LI G+    +  EA R
Sbjct: 77  EPNIVAYSTVIDCLCKNGLLKEALDLFSEVKVKGIRPNIITYTCLIHGMCNSGQQEEATR 136

Query: 201 L------------------------YDVMLRKGVEPTVYTY 251
                                     D+M ++G+EP V TY
Sbjct: 137 FLNEMVITIIDALCKEGTISKALETVDMMRKQGIEPNVVTY 177



 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 26/80 (32%), Positives = 42/80 (52%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+TY IL+  HC    + +A  +++ M +K   P   T+N +I G  +  R  EA+ 
Sbjct: 241 EPDVVTYNILVNGHCLRNKMDKARRVFNLMIEKGCAPDIVTYNTMINGYCKAKRLDEAME 300

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           L+  + +K   P   TY  L
Sbjct: 301 LFHEISQKEPIPDTVTYSTL 320



 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 29/83 (34%), Positives = 45/83 (54%)
 Frame = +3

Query: 12  KFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTRE 191
           +F +  VIT   +I A CK G + +AL+  D M K+ IEP   T+  ++    +     E
Sbjct: 136 RFLNEMVIT---IIDALCKEGTISKALETVDMMRKQGIEPNVVTYTTMVDAHCKEGMVSE 192

Query: 192 ALRLYDVMLRKGVEPTVYTYRYL 260
           A  + D M+++G+EP V TY  L
Sbjct: 193 AEDIVDAMIKRGIEPDVVTYNTL 215



 Score = 52.0 bits (123), Expect = 8e-06
 Identities = 24/81 (29%), Positives = 46/81 (56%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PD++TY  +I  +CK   + EA++L+ E+ +K+  P   T++ L++ + ++ + 
Sbjct: 271 IEKGCAPDIVTYNTMINGYCKAKRLDEAMELFHEISQKEPIPDTVTYSTLMQSMFQLGKV 330

Query: 186 REALRLYDVMLRKGVEPTVYT 248
             A  L+  ML  G  P + T
Sbjct: 331 STACELFRKMLASGQVPDIAT 351


>4PJR_A Chain A, Crystal Structure Of Designed Cppr-nre Protein
          Length = 303

 Score = 77.4 bits (189), Expect = 4e-15
 Identities = 41/84 (48%), Positives = 52/84 (61%)
 Frame = +3

Query: 9   EKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTR 188
           EK   PDV+TYT LI    K G + EAL+L++EM +K I P   T+N LI GLG+  R  
Sbjct: 101 EKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISGLGKAGRLE 160

Query: 189 EALRLYDVMLRKGVEPTVYTYRYL 260
           EAL L++ M  KG+ P V TY  L
Sbjct: 161 EALELFEEMKEKGIVPDVVTYTTL 184



 Score = 77.4 bits (189), Expect = 4e-15
 Identities = 41/84 (48%), Positives = 52/84 (61%)
 Frame = +3

Query: 9   EKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTR 188
           EK   PDV+TYT LI    K G + EAL+L++EM +K I P   T+N LI GLG+  R  
Sbjct: 171 EKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISGLGKAGRLE 230

Query: 189 EALRLYDVMLRKGVEPTVYTYRYL 260
           EAL L++ M  KG+ P V TY  L
Sbjct: 231 EALELFEEMKEKGIVPDVVTYTTL 254



 Score = 77.0 bits (188), Expect = 6e-15
 Identities = 41/84 (48%), Positives = 52/84 (61%)
 Frame = +3

Query: 9   EKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTR 188
           EK   PDV+TYT LI    K G + EAL+L++EM +K I P   T+N LI GLG+  R  
Sbjct: 31  EKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYNTLISGLGKAGRLE 90

Query: 189 EALRLYDVMLRKGVEPTVYTYRYL 260
           EAL L++ M  KG+ P V TY  L
Sbjct: 91  EALELFEEMKEKGIVPDVVTYTTL 114



 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 39/84 (46%), Positives = 50/84 (59%)
 Frame = +3

Query: 9   EKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTR 188
           EK   PDV+TY  LI    K G + EAL+L++EM +K I P   T+  LI GLG+  R  
Sbjct: 66  EKGIVPDVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLE 125

Query: 189 EALRLYDVMLRKGVEPTVYTYRYL 260
           EAL L++ M  KG+ P V TY  L
Sbjct: 126 EALELFEEMKEKGIVPNVVTYNTL 149



 Score = 71.6 bits (174), Expect = 6e-13
 Identities = 38/84 (45%), Positives = 50/84 (59%)
 Frame = +3

Query: 9   EKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTR 188
           EK   P+V+TY  LI    K G + EAL+L++EM +K I P   T+  LI GLG+  R  
Sbjct: 136 EKGIVPNVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLE 195

Query: 189 EALRLYDVMLRKGVEPTVYTYRYL 260
           EAL L++ M  KG+ P V TY  L
Sbjct: 196 EALELFEEMKEKGIVPNVVTYNTL 219



 Score = 71.6 bits (174), Expect = 6e-13
 Identities = 38/84 (45%), Positives = 50/84 (59%)
 Frame = +3

Query: 9   EKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTR 188
           EK   P+V+TY  LI    K G + EAL+L++EM +K I P   T+  LI GLG+  R  
Sbjct: 206 EKGIVPNVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLE 265

Query: 189 EALRLYDVMLRKGVEPTVYTYRYL 260
           EAL L++ M  KG+ P V TY  L
Sbjct: 266 EALELFEEMKEKGIVPNVVTYNTL 289



 Score = 65.9 bits (159), Expect = 8e-11
 Identities = 34/76 (44%), Positives = 45/76 (59%)
 Frame = +3

Query: 33  ITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLYDV 212
           +TY  LI    K G + EAL+L++EM +K I P   T+  LI GLG+  R  EAL L++ 
Sbjct: 4   VTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEE 63

Query: 213 MLRKGVEPTVYTYRYL 260
           M  KG+ P V TY  L
Sbjct: 64  MKEKGIVPDVVTYNTL 79



 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 28/55 (50%), Positives = 36/55 (65%)
 Frame = +3

Query: 9   EKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGR 173
           EK   PDV+TYT LI    K G + EAL+L++EM +K I P   T+N LI GLG+
Sbjct: 241 EKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISGLGK 295


>XP_012441381.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Gossypium raimondii] KJB61791.1
           hypothetical protein B456_009G381100 [Gossypium
           raimondii]
          Length = 532

 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 35/77 (45%), Positives = 50/77 (64%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+TY+ L+ AHCK GMV EA D+ D M K+ IEP   T+N L+ G    N   +A R
Sbjct: 230 EPDVVTYSTLVDAHCKEGMVSEAEDIVDAMIKRGIEPDVVTYNTLVNGHCLQNEMDKARR 289

Query: 201 LYDVMLRKGVEPTVYTY 251
           ++++M+ KG  P + TY
Sbjct: 290 VFNLMIEKGCAPNIVTY 306



 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 30/78 (38%), Positives = 48/78 (61%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           D++TYT+LI A CK G + +A+++ D M K+ IEP   T++ L+    +     EA  + 
Sbjct: 197 DIVTYTLLIDALCKEGTISKAVEIVDTMRKQGIEPDVVTYSTLVDAHCKEGMVSEAEDIV 256

Query: 207 DVMLRKGVEPTVYTYRYL 260
           D M+++G+EP V TY  L
Sbjct: 257 DAMIKRGIEPDVVTYNTL 274



 Score = 58.2 bits (139), Expect = 6e-08
 Identities = 28/80 (35%), Positives = 45/80 (56%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PD++ Y+ +I   CK+G++ EAL+L  EM  K I P   T+  LI G+  + +  EA R
Sbjct: 125 EPDIVAYSTVIDCLCKNGLLQEALNLLSEMKVKGIRPDIITYTCLIHGMCNLGQQEEATR 184

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           L + M+   +   + TY  L
Sbjct: 185 LLNEMVDNNISLDIVTYTLL 204



 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 24/77 (31%), Positives = 42/77 (54%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+ ++ LI   C    + EA+ ++DEM +K  +P    ++ ++KGL +   T  A R
Sbjct: 55  EPDVVIFSTLINGLCNQSKISEAVCMFDEMTEKGYQPDSIVYSTMLKGLCKTGNTVRAAR 114

Query: 201 LYDVMLRKGVEPTVYTY 251
              +M  +G EP +  Y
Sbjct: 115 FLRLMESRGYEPDIVAY 131



 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 30/79 (37%), Positives = 41/79 (51%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           PD+ITYT LI   C  G   EA  L +EM   +I     T+  LI  L +     +A+ +
Sbjct: 161 PDIITYTCLIHGMCNLGQQEEATRLLNEMVDNNISLDIVTYTLLIDALCKEGTISKAVEI 220

Query: 204 YDVMLRKGVEPTVYTYRYL 260
            D M ++G+EP V TY  L
Sbjct: 221 VDTMRKQGIEPDVVTYSTL 239



 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 24/80 (30%), Positives = 42/80 (52%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+TY  L+  HC    + +A  +++ M +K   P   T+N +I    +  R  EA+ 
Sbjct: 265 EPDVVTYNTLVNGHCLQNEMDKARRVFNLMIEKGCAPNIVTYNTMINEYCKAKRLDEAME 324

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
            +  + +KG  P ++TY  L
Sbjct: 325 FFHEISQKGPIPNIFTYNTL 344



 Score = 52.0 bits (123), Expect = 8e-06
 Identities = 24/77 (31%), Positives = 43/77 (55%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   P+++TY  +I  +CK   + EA++ + E+ +K   P  FT+N L++ + ++ R 
Sbjct: 295 IEKGCAPNIVTYNTMINEYCKAKRLDEAMEFFHEISQKGPIPNIFTYNTLLQSMFQLGRV 354

Query: 186 REALRLYDVMLRKGVEP 236
             A  L+  ML  G  P
Sbjct: 355 STACELFRKMLASGQVP 371


>XP_006412544.1 hypothetical protein EUTSA_v10024264mg [Eutrema salsugineum]
           ESQ53997.1 hypothetical protein EUTSA_v10024264mg
           [Eutrema salsugineum]
          Length = 1118

 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 38/76 (50%), Positives = 51/76 (67%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           PDV+T+TIL+ A CK G  GEA D  D M ++ + P   T+N LI GL RV+R  +AL++
Sbjct: 366 PDVVTFTILVDALCKAGNFGEAFDTLDVMREQGVSPNLHTYNTLICGLLRVHRLNDALKV 425

Query: 204 YDVMLRKGVEPTVYTY 251
           +D M   GV+PT YTY
Sbjct: 426 FDSMESLGVKPTAYTY 441



 Score = 62.0 bits (149), Expect = 3e-09
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = +3

Query: 24   PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
            PD+ TY++L+   C  G V E L  + E+ +  ++P    +N +I GLG+  R  EAL L
Sbjct: 965  PDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLDPDVVCYNLIINGLGKSQRLEEALEL 1024

Query: 204  YDVMLR-KGVEPTVYTYRYL 260
            Y+ M   +G+ P +YTY  L
Sbjct: 1025 YNEMKNSRGITPDLYTYNSL 1044



 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = +3

Query: 21   DPDVITYTILIGAHCKHGMVGEALDLYDEMCK-KDIEPTYFTFNFLIKGLGRVNRTREAL 197
            DPDV+ Y ++I    K   + EAL+LY+EM   + I P  +T+N LI  +G       A 
Sbjct: 999  DPDVVCYNLIINGLGKSQRLEEALELYNEMKNSRGITPDLYTYNSLILNMGIAGMVEGAG 1058

Query: 198  RLYDVMLRKGVEPTVYTYRYL 260
            ++YD + R G+EP V+T+  L
Sbjct: 1059 KIYDEIQRAGLEPNVFTFNAL 1079



 Score = 58.2 bits (139), Expect = 6e-08
 Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
 Frame = +3

Query: 24   PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
            PDVITY  L+ A+ K G + E  +LY EM   D +P   T N ++ GL +     EAL L
Sbjct: 824  PDVITYNFLLDAYAKSGKIDELFELYKEMSFHDCKPNTITHNIVMSGLVKAGNVDEALDL 883

Query: 204  YDVMLRKG-VEPTVYTY 251
            Y  ++  G   PT  TY
Sbjct: 884  YYDLISDGDFSPTACTY 900



 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 29/85 (34%), Positives = 45/85 (52%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +E   +PDVI    LI    K   V EA  ++  M +  ++PT  T+N L+ GLG+  + 
Sbjct: 535 VENGCEPDVIVVNSLINTLFKADRVDEAWKMFTRMKEMKLKPTVVTYNTLLAGLGKNGKI 594

Query: 186 REALRLYDVMLRKGVEPTVYTYRYL 260
           +EA+ L++ M  KG  P   T+  L
Sbjct: 595 QEAIELFEGMEMKGCPPNTITFNTL 619



 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 27/79 (34%), Positives = 43/79 (54%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           PD +TY +++  + K G + EA++L  EM +   EP     N LI  L + +R  EA ++
Sbjct: 506 PDSVTYNMMMKCYSKVGEIDEAINLLTEMVENGCEPDVIVVNSLINTLFKADRVDEAWKM 565

Query: 204 YDVMLRKGVEPTVYTYRYL 260
           +  M    ++PTV TY  L
Sbjct: 566 FTRMKEMKLKPTVVTYNTL 584



 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 30/79 (37%), Positives = 39/79 (49%)
 Frame = +3

Query: 24   PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
            PD+ TY  LI      GMV  A  +YDE+ +  +EP  FTFN LI+G     +   A  +
Sbjct: 1036 PDLYTYNSLILNMGIAGMVEGAGKIYDEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1095

Query: 204  YDVMLRKGVEPTVYTYRYL 260
            Y  M+  G  P   TY  L
Sbjct: 1096 YQTMVTGGFSPNTGTYEQL 1114


>XP_017604707.1 PREDICTED: protein Rf1, mitochondrial-like [Gossypium arboreum]
          Length = 1192

 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 37/81 (45%), Positives = 53/81 (65%)
 Frame = +3

Query: 9   EKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTR 188
           +K  +P+V+TY+IL+ AHCK GMV EA D+ D M K+ IEP   T N LI G    N+  
Sbjct: 319 KKGIEPNVVTYSILVDAHCKEGMVSEAEDIVDAMIKRGIEPNVVTHNALINGHCLQNKMD 378

Query: 189 EALRLYDVMLRKGVEPTVYTY 251
           +A R++++M+ KG  P + TY
Sbjct: 379 KARRVFNLMIEKGCAPDIVTY 399



 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 36/77 (46%), Positives = 47/77 (61%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P+V TY  L+ AHCK GMV EA D+ D M K+ IEP   T N LI G    N   +A R
Sbjct: 758 EPNVATYNKLVDAHCKEGMVSEAEDIVDAMIKRGIEPNVVTHNALINGHCLQNEMDKAGR 817

Query: 201 LYDVMLRKGVEPTVYTY 251
           L+++M+ KG  P + TY
Sbjct: 818 LFNLMIEKGCAPNIVTY 834



 Score = 66.6 bits (161), Expect = 6e-11
 Identities = 30/78 (38%), Positives = 48/78 (61%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           +++TY ILI A CK GM+ +A+++ D M KK IEP   T++ L+    +     EA  + 
Sbjct: 290 NIVTYNILIDALCKEGMISKAIEIVDTMRKKGIEPNVVTYSILVDAHCKEGMVSEAEDIV 349

Query: 207 DVMLRKGVEPTVYTYRYL 260
           D M+++G+EP V T+  L
Sbjct: 350 DAMIKRGIEPNVVTHNAL 367



 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
 Frame = +3

Query: 21   DPDVITYTILIGAHCKHGMVGEALDLYDEMCK------KDIEPTYFTFNFLIKGLGRVNR 182
            +P+V+TY+ L+ AHCK GMV EA D+   M K      + IEP   T N LI G    N+
Sbjct: 884  EPNVVTYSTLVDAHCKEGMVSEAEDIVVAMIKRGIEPNRGIEPNVVTHNALINGHCLQNK 943

Query: 183  TREALRLYDVMLRKGVEPTVYTY 251
              +A R++++M+ KG  P + TY
Sbjct: 944  MDKARRVFNLMIEKGCAPDIVTY 966



 Score = 63.5 bits (153), Expect = 7e-10
 Identities = 30/78 (38%), Positives = 46/78 (58%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           D++TY ILI A CK G + +A++  D M K+ IEP   T+N L+    +     EA  + 
Sbjct: 725 DIVTYNILIDALCKEGTISKAVETVDTMRKQGIEPNVATYNKLVDAHCKEGMVSEAEDIV 784

Query: 207 DVMLRKGVEPTVYTYRYL 260
           D M+++G+EP V T+  L
Sbjct: 785 DAMIKRGIEPNVVTHNAL 802



 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 27/80 (33%), Positives = 45/80 (56%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P+++ Y  ++   CK+G+  EALD++ E+  K I P  FT+N LI G+    +  EA R
Sbjct: 653 EPNIVAYNTILDCLCKNGLFKEALDVFSEVKDKGIRPDIFTYNCLIHGMCNFGQQEEATR 712

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           L + M+   +   + TY  L
Sbjct: 713 LLNEMVDNNISLDIVTYNIL 732



 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 26/80 (32%), Positives = 47/80 (58%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P+++ Y+ ++    K+G++ EALDL+ E+  K I P  FT++ LI G+  + +  EA R
Sbjct: 218 EPNIVAYSTILDCLFKNGLLKEALDLFSEVKVKGIRPNIFTYSCLIHGMCNLGQLEEATR 277

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           L + M+   +   + TY  L
Sbjct: 278 LLNEMVDNNISLNIVTYNIL 297



 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 29/79 (36%), Positives = 42/79 (53%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           P++ TY+ LI   C  G + EA  L +EM   +I     T+N LI  L +     +A+ +
Sbjct: 254 PNIFTYSCLIHGMCNLGQLEEATRLLNEMVDNNISLNIVTYNILIDALCKEGMISKAIEI 313

Query: 204 YDVMLRKGVEPTVYTYRYL 260
            D M +KG+EP V TY  L
Sbjct: 314 VDTMRKKGIEPNVVTYSIL 332



 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 25/82 (30%), Positives = 46/82 (56%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PD++TY+ +I  +CK   + EA++L+ E+ +K   P   T+N L++ + ++ + 
Sbjct: 388 IEKGCAPDIVTYSTMINGYCKAKRLDEAMELFHEISQKGPIPNTVTYNTLVQSMFQLGKV 447

Query: 186 REALRLYDVMLRKGVEPTVYTY 251
             A  L   ML  G  P + T+
Sbjct: 448 STACELLRKMLASGQVPNIVTF 469



 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 29/79 (36%), Positives = 39/79 (49%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           PD+ TY  LI   C  G   EA  L +EM   +I     T+N LI  L +     +A+  
Sbjct: 689 PDIFTYNCLIHGMCNFGQQEEATRLLNEMVDNNISLDIVTYNILIDALCKEGTISKAVET 748

Query: 204 YDVMLRKGVEPTVYTYRYL 260
            D M ++G+EP V TY  L
Sbjct: 749 VDTMRKQGIEPNVATYNKL 767



 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 25/82 (30%), Positives = 46/82 (56%)
 Frame = +3

Query: 6    MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
            +EK   PD++TY+ +I  +CK   + EA++L+ E+ +K   P   T+N L++ + ++ + 
Sbjct: 955  IEKGCAPDIVTYSTMINGYCKAKRLDEAMELFHEISQKGPIPNTVTYNTLVQSMFQLGKV 1014

Query: 186  REALRLYDVMLRKGVEPTVYTY 251
              A  L   ML  G  P + T+
Sbjct: 1015 STACELLRKMLASGQVPNIVTF 1036



 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 21/77 (27%), Positives = 41/77 (53%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P  +T++ LI   C    + EA+ ++D M ++  +P    ++ ++KGL +   T  A+R
Sbjct: 148 EPSAVTFSTLINGLCNQNKISEAVSMFDGMTERGYQPNLIVYSTVLKGLCKTGNTGRAVR 207

Query: 201 LYDVMLRKGVEPTVYTY 251
              +M  +G EP +  Y
Sbjct: 208 FLRLMESRGFEPNIVAY 224



 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 26/75 (34%), Positives = 40/75 (53%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           DV +  ILI   C+ G +   L +  +M K   EP+  TF+ LI GL   N+  EA+ ++
Sbjct: 115 DVYSLNILINCFCQIGRIDFGLSVLGKMLKLGFEPSAVTFSTLINGLCNQNKISEAVSMF 174

Query: 207 DVMLRKGVEPTVYTY 251
           D M  +G +P +  Y
Sbjct: 175 DGMTERGYQPNLIVY 189


>4OZS_A Chain A, Rna Binding Protein
          Length = 175

 Score = 74.7 bits (182), Expect = 7e-15
 Identities = 39/84 (46%), Positives = 50/84 (59%)
 Frame = +3

Query: 9   EKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTR 188
           EK   PDV+TY  LI    K G + EAL L+ EM +K ++P   T+N LI GL +  R  
Sbjct: 30  EKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLE 89

Query: 189 EALRLYDVMLRKGVEPTVYTYRYL 260
           EAL+L+  M  KGV+P V TY  L
Sbjct: 90  EALQLFQEMKEKGVKPDVVTYNTL 113



 Score = 74.7 bits (182), Expect = 7e-15
 Identities = 39/84 (46%), Positives = 50/84 (59%)
 Frame = +3

Query: 9   EKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTR 188
           EK   PDV+TY  LI    K G + EAL L+ EM +K ++P   T+N LI GL +  R  
Sbjct: 65  EKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLE 124

Query: 189 EALRLYDVMLRKGVEPTVYTYRYL 260
           EAL+L+  M  KGV+P V TY  L
Sbjct: 125 EALQLFQEMKEKGVKPDVVTYNTL 148



 Score = 70.5 bits (171), Expect = 3e-13
 Identities = 36/78 (46%), Positives = 47/78 (60%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           DV+TY  LI    K G + EAL L+ EM +K ++P   T+N LI GL +  R  EAL+L+
Sbjct: 1   DVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLF 60

Query: 207 DVMLRKGVEPTVYTYRYL 260
             M  KGV+P V TY  L
Sbjct: 61  QEMKEKGVKPDVVTYNTL 78



 Score = 68.6 bits (166), Expect = 2e-12
 Identities = 35/76 (46%), Positives = 46/76 (60%)
 Frame = +3

Query: 9   EKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTR 188
           EK   PDV+TY  LI    K G + EAL L+ EM +K ++P   T+N LI GL +  R  
Sbjct: 100 EKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLE 159

Query: 189 EALRLYDVMLRKGVEP 236
           EAL+L+  M  KGV+P
Sbjct: 160 EALQLFQEMKEKGVKP 175


>XP_016685232.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial [Gossypium hirsutum]
          Length = 588

 Score = 77.8 bits (190), Expect = 7e-15
 Identities = 36/80 (45%), Positives = 49/80 (61%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+TY  L+ AHCK GMV EA D+ D M K+ IEP   T+N L+    +     EA  
Sbjct: 322 EPDVVTYNTLVDAHCKEGMVSEAEDIIDAMIKRGIEPDIVTYNTLVDAHCKEGMVSEAED 381

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           + D M+++G+EP V TY  L
Sbjct: 382 IVDAMIKRGIEPNVVTYSAL 401



 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PD++TY  L+ AHCK GMV EA D+ D M K+ IEP   T++ LI G    N   +A R
Sbjct: 357 EPDIVTYNTLVDAHCKEGMVSEAEDIVDAMIKRGIEPNVVTYSALINGHCLQNEMHKARR 416

Query: 201 LYDVMLRKGVEPTVYTY 251
           ++++M+ KG  P + TY
Sbjct: 417 VFNLMIEKGCAPDIVTY 433



 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 25/77 (32%), Positives = 43/77 (55%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+ ++ LI   C    + EA+ ++DEM +K  +P    +N ++KGL +   T  A+R
Sbjct: 147 EPDVVIFSTLINGLCNQSKISEAVFMFDEMTEKGYQPNLIVYNTVLKGLCKTGNTDRAVR 206

Query: 201 LYDVMLRKGVEPTVYTY 251
              +M  +G EP +  Y
Sbjct: 207 FLRLMESRGFEPNIVAY 223



 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 28/78 (35%), Positives = 44/78 (56%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           ++ TY ILI A CK G + +A++  D M  + IEP   T+N L+    +     EA  + 
Sbjct: 289 NIDTYNILIAALCKEGTISKAVETVDMMIMQGIEPDVVTYNTLVDAHCKEGMVSEAEDII 348

Query: 207 DVMLRKGVEPTVYTYRYL 260
           D M+++G+EP + TY  L
Sbjct: 349 DAMIKRGIEPDIVTYNTL 366



 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 30/79 (37%), Positives = 42/79 (53%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           P++ITYT LI   C  G   EA  L +EM   +I     T+N LI  L +     +A+  
Sbjct: 253 PNIITYTCLIHGMCNLGQQEEATRLLNEMVDNNISINIDTYNILIAALCKEGTISKAVET 312

Query: 204 YDVMLRKGVEPTVYTYRYL 260
            D+M+ +G+EP V TY  L
Sbjct: 313 VDMMIMQGIEPDVVTYNTL 331



 Score = 55.1 bits (131), Expect = 7e-07
 Identities = 29/82 (35%), Positives = 45/82 (54%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PD++TY+ +I  +CK G + EAL L+  M    +E     +  LI GL +  R 
Sbjct: 422 IEKGCAPDIVTYSTMINGYCK-GHIEEALKLFQAMRNSGLELDTVPYTILIDGLCKAGRI 480

Query: 186 REALRLYDVMLRKGVEPTVYTY 251
             A  L+ ++   G++P VYTY
Sbjct: 481 EFAKELFCLLSDNGLKPDVYTY 502



 Score = 54.7 bits (130), Expect = 9e-07
 Identities = 25/80 (31%), Positives = 44/80 (55%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P+++ Y  ++   CK+ ++ EALDL+ E+  K I P   T+  LI G+  + +  EA R
Sbjct: 217 EPNIVAYNTILDCLCKNRLLKEALDLFSEVKVKGIRPNIITYTCLIHGMCNLGQQEEATR 276

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           L + M+   +   + TY  L
Sbjct: 277 LLNEMVDNNISINIDTYNIL 296


>KJB61767.1 hypothetical protein B456_009G379200 [Gossypium raimondii]
          Length = 614

 Score = 77.8 bits (190), Expect = 7e-15
 Identities = 36/80 (45%), Positives = 49/80 (61%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+TY  L+ AHCK GMV EA D+ D M K+ IEP   T+N L+    +     EA  
Sbjct: 277 EPDVVTYNTLVDAHCKEGMVSEAEDIIDAMIKRGIEPDIVTYNTLVDAHCKEGMVSEAED 336

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           + D M+++G+EP V TY  L
Sbjct: 337 IVDAMMKRGIEPNVVTYSAL 356



 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PD++TY  L+ AHCK GMV EA D+ D M K+ IEP   T++ LI G    N   +A R
Sbjct: 312 EPDIVTYNTLVDAHCKEGMVSEAEDIVDAMMKRGIEPNVVTYSALINGHCLQNEMHKARR 371

Query: 201 LYDVMLRKGVEPTVYTY 251
           ++++M+ KG  P + TY
Sbjct: 372 VFNLMIEKGCAPDIVTY 388



 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 25/77 (32%), Positives = 43/77 (55%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+ ++ LI   C    + EA+ ++DEM +K  +P    +N ++KGL +   T  A+R
Sbjct: 102 EPDVVIFSTLINGLCNQSKISEAVFMFDEMTEKGYQPNLIVYNTVLKGLCKTGNTDRAVR 161

Query: 201 LYDVMLRKGVEPTVYTY 251
              +M  +G EP +  Y
Sbjct: 162 FLRLMESRGFEPNIVAY 178



 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 28/78 (35%), Positives = 44/78 (56%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           ++ TY ILI A CK G + +A++  D M  + IEP   T+N L+    +     EA  + 
Sbjct: 244 NIDTYNILIAALCKEGTISKAVETVDMMIMQGIEPDVVTYNTLVDAHCKEGMVSEAEDII 303

Query: 207 DVMLRKGVEPTVYTYRYL 260
           D M+++G+EP + TY  L
Sbjct: 304 DAMIKRGIEPDIVTYNTL 321



 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 30/79 (37%), Positives = 42/79 (53%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           P++ITYT LI   C  G   EA  L +EM   +I     T+N LI  L +     +A+  
Sbjct: 208 PNIITYTCLIHGMCNLGQQEEATRLLNEMVDNNISINIDTYNILIAALCKEGTISKAVET 267

Query: 204 YDVMLRKGVEPTVYTYRYL 260
            D+M+ +G+EP V TY  L
Sbjct: 268 VDMMIMQGIEPDVVTYNTL 286



 Score = 54.7 bits (130), Expect = 9e-07
 Identities = 25/80 (31%), Positives = 44/80 (55%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P+++ Y  ++   CK+ ++ EALDL+ E+  K I P   T+  LI G+  + +  EA R
Sbjct: 172 EPNIVAYNTILDCLCKNRLLKEALDLFSEVKVKGIRPNIITYTCLIHGMCNLGQQEEATR 231

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           L + M+   +   + TY  L
Sbjct: 232 LLNEMVDNNISINIDTYNIL 251


>XP_012441332.1 PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Gossypium raimondii]
          Length = 659

 Score = 77.8 bits (190), Expect = 7e-15
 Identities = 36/80 (45%), Positives = 49/80 (61%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+TY  L+ AHCK GMV EA D+ D M K+ IEP   T+N L+    +     EA  
Sbjct: 322 EPDVVTYNTLVDAHCKEGMVSEAEDIIDAMIKRGIEPDIVTYNTLVDAHCKEGMVSEAED 381

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           + D M+++G+EP V TY  L
Sbjct: 382 IVDAMMKRGIEPNVVTYSAL 401



 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PD++TY  L+ AHCK GMV EA D+ D M K+ IEP   T++ LI G    N   +A R
Sbjct: 357 EPDIVTYNTLVDAHCKEGMVSEAEDIVDAMMKRGIEPNVVTYSALINGHCLQNEMHKARR 416

Query: 201 LYDVMLRKGVEPTVYTY 251
           ++++M+ KG  P + TY
Sbjct: 417 VFNLMIEKGCAPDIVTY 433



 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 25/77 (32%), Positives = 43/77 (55%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+ ++ LI   C    + EA+ ++DEM +K  +P    +N ++KGL +   T  A+R
Sbjct: 147 EPDVVIFSTLINGLCNQSKISEAVFMFDEMTEKGYQPNLIVYNTVLKGLCKTGNTDRAVR 206

Query: 201 LYDVMLRKGVEPTVYTY 251
              +M  +G EP +  Y
Sbjct: 207 FLRLMESRGFEPNIVAY 223



 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 28/78 (35%), Positives = 44/78 (56%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           ++ TY ILI A CK G + +A++  D M  + IEP   T+N L+    +     EA  + 
Sbjct: 289 NIDTYNILIAALCKEGTISKAVETVDMMIMQGIEPDVVTYNTLVDAHCKEGMVSEAEDII 348

Query: 207 DVMLRKGVEPTVYTYRYL 260
           D M+++G+EP + TY  L
Sbjct: 349 DAMIKRGIEPDIVTYNTL 366



 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 30/79 (37%), Positives = 42/79 (53%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           P++ITYT LI   C  G   EA  L +EM   +I     T+N LI  L +     +A+  
Sbjct: 253 PNIITYTCLIHGMCNLGQQEEATRLLNEMVDNNISINIDTYNILIAALCKEGTISKAVET 312

Query: 204 YDVMLRKGVEPTVYTYRYL 260
            D+M+ +G+EP V TY  L
Sbjct: 313 VDMMIMQGIEPDVVTYNTL 331



 Score = 54.7 bits (130), Expect = 9e-07
 Identities = 25/80 (31%), Positives = 44/80 (55%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P+++ Y  ++   CK+ ++ EALDL+ E+  K I P   T+  LI G+  + +  EA R
Sbjct: 217 EPNIVAYNTILDCLCKNRLLKEALDLFSEVKVKGIRPNIITYTCLIHGMCNLGQQEEATR 276

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           L + M+   +   + TY  L
Sbjct: 277 LLNEMVDNNISINIDTYNIL 296


>XP_016738899.1 PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Gossypium hirsutum]
          Length = 695

 Score = 77.8 bits (190), Expect = 7e-15
 Identities = 36/82 (43%), Positives = 51/82 (62%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   PD++TY IL+ AHCK GMV EA D+ D M K+ IEP   T++ L+ G    N  
Sbjct: 388 IEKGCAPDIVTYNILVDAHCKQGMVFEAKDIVDSMRKRGIEPNVVTYSVLVNGHCLQNEM 447

Query: 186 REALRLYDVMLRKGVEPTVYTY 251
            +A R++ +M+ KG  P + TY
Sbjct: 448 DKARRVFSLMIEKGCAPNIVTY 469



 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 34/80 (42%), Positives = 45/80 (56%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+ Y  L+ A CK GMV EA    D M K+ IEP   T N LI G    N   +A R
Sbjct: 323 EPDVVRYNTLVDALCKEGMVSEAEGFVDAMIKRGIEPNVVTHNALINGHCLQNEMDKARR 382

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           ++++M+ KG  P + TY  L
Sbjct: 383 VFNLMIEKGCAPDIVTYNIL 402



 Score = 66.6 bits (161), Expect = 6e-11
 Identities = 32/78 (41%), Positives = 46/78 (58%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           D++TY ILIGA CK G V +A++  D M K+ IEP    +N L+  L +     EA    
Sbjct: 290 DIVTYNILIGAFCKEGKVSKAVETVDLMRKQGIEPDVVRYNTLVDALCKEGMVSEAEGFV 349

Query: 207 DVMLRKGVEPTVYTYRYL 260
           D M+++G+EP V T+  L
Sbjct: 350 DAMIKRGIEPNVVTHNAL 367



 Score = 55.1 bits (131), Expect = 7e-07
 Identities = 26/80 (32%), Positives = 44/80 (55%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PD++ Y+ ++   CK+G++ EAL+L  EM  K I P   T++ LI G+    +  EA R
Sbjct: 218 EPDIVAYSTILDCLCKNGLLQEALNLLSEMKVKGIRPNVVTYSCLIHGMCNSGQQEEATR 277

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           L +  +   +   + TY  L
Sbjct: 278 LLNETVDNNISLDIVTYNIL 297



 Score = 55.1 bits (131), Expect = 7e-07
 Identities = 25/80 (31%), Positives = 43/80 (53%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P+V+TY++L+  HC    + +A  ++  M +K   P   T+N +I G  +  R  EA+ 
Sbjct: 428 EPNVVTYSVLVNGHCLQNEMDKARRVFSLMIEKGCAPNIVTYNTMINGYCKAKRLGEAME 487

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           L+  + +KG  P   TY  L
Sbjct: 488 LFHEISQKGPIPDTVTYNTL 507



 Score = 55.1 bits (131), Expect = 7e-07
 Identities = 25/81 (30%), Positives = 46/81 (56%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRT 185
           +EK   P+++TY  +I  +CK   +GEA++L+ E+ +K   P   T+N L++ + ++ + 
Sbjct: 458 IEKGCAPNIVTYNTMINGYCKAKRLGEAMELFHEISQKGPIPDTVTYNTLVQSMFQLGKV 517

Query: 186 REALRLYDVMLRKGVEPTVYT 248
             A  L+  ML  G  P + T
Sbjct: 518 STACELFRKMLASGQVPNIVT 538



 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 26/75 (34%), Positives = 41/75 (54%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           DV + +ILI   C+ G +   L +  +M K   EP+  TF+ LI GL   N+  EA+ ++
Sbjct: 115 DVYSMSILINCFCQLGRIDFGLSVLGKMLKLGFEPSAVTFSTLINGLCNQNKISEAVSMF 174

Query: 207 DVMLRKGVEPTVYTY 251
           D M+  G +P +  Y
Sbjct: 175 DGMIESGYQPNLIVY 189


>KJB61807.1 hypothetical protein B456_009G384100 [Gossypium raimondii]
          Length = 416

 Score = 77.4 bits (189), Expect = 8e-15
 Identities = 35/76 (46%), Positives = 49/76 (64%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           PDV+TY IL+ AHCK GMV EA D  D M K++IEP   T++ L+ G    N   +A R+
Sbjct: 183 PDVVTYNILVDAHCKEGMVSEAEDFVDAMIKREIEPNVVTYSTLVNGHCLQNEMDKARRV 242

Query: 204 YDVMLRKGVEPTVYTY 251
           +++M+ KG  P + TY
Sbjct: 243 FNLMIEKGCAPDIVTY 258



 Score = 61.2 bits (147), Expect = 5e-09
 Identities = 29/80 (36%), Positives = 46/80 (57%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PD++ Y+ +I   CK+G++ EALDL+ E+  K I P  FT+  LI G+    +  EA R
Sbjct: 77  EPDIVAYSTVIDCLCKNGLLQEALDLFSEVKVKGIRPNIFTYTCLIHGMCNSGQQEEATR 136

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           L + M+   +   + TY  L
Sbjct: 137 LLNEMVDNNISLGIVTYTLL 156



 Score = 60.8 bits (146), Expect = 6e-09
 Identities = 29/77 (37%), Positives = 45/77 (58%)
 Frame = +3

Query: 30  VITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLYD 209
           ++TYT+LI A CK GM+ +A+++ D M K+ I P   T+N L+    +     EA    D
Sbjct: 150 IVTYTLLIDALCKEGMIFKAVEIVDTMRKQGIVPDVVTYNILVDAHCKEGMVSEAEDFVD 209

Query: 210 VMLRKGVEPTVYTYRYL 260
            M+++ +EP V TY  L
Sbjct: 210 AMIKREIEPNVVTYSTL 226



 Score = 54.7 bits (130), Expect = 9e-07
 Identities = 24/77 (31%), Positives = 41/77 (53%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P  +TY+ LI   C    + EA+ + DEM +K  +P    ++ ++KGL +   T  A+R
Sbjct: 7   EPSGVTYSTLINGLCNQSKISEAVCILDEMTEKRYQPNLIVYSTMLKGLCKTGNTGRAVR 66

Query: 201 LYDVMLRKGVEPTVYTY 251
              +M  +G EP +  Y
Sbjct: 67  FLRLMESRGCEPDIVAY 83



 Score = 52.0 bits (123), Expect = 8e-06
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
 Frame = +3

Query: 6   MEKFSDPDVITYTILIGAHC--KHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVN 179
           +EK   PD++TY+ +I  +C  K G + EAL L+  M    +E     +N LI GL +  
Sbjct: 247 IEKGCAPDIVTYSTMINGYCKGKTGHIEEALKLFQAMRNSGLELDIVPYNILIDGLCKAG 306

Query: 180 RTREALRLYDVMLRKGVEPTVYTYRYL 260
               A  L+  +   G++P V TY  +
Sbjct: 307 HIEFAKELFHQLSDNGLKPNVVTYHIM 333


>KJB61746.1 hypothetical protein B456_009G377400 [Gossypium raimondii]
          Length = 532

 Score = 77.4 bits (189), Expect = 9e-15
 Identities = 34/77 (44%), Positives = 51/77 (66%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P+V+TY+ L+ AHCK GMV EA D+ D M K+ IEP   T+N L+ G    N+  +A R
Sbjct: 230 EPNVVTYSTLVDAHCKQGMVSEANDIVDTMIKRGIEPNVVTYNALVNGHCLQNKMDKARR 289

Query: 201 LYDVMLRKGVEPTVYTY 251
           ++++M+ KG  P + TY
Sbjct: 290 VFNLMIEKGCAPNIVTY 306



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 31/80 (38%), Positives = 49/80 (61%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PDV+TY+ L+ A CK GM+ +A++  D M K+ IEP   T++ L+    +     EA  
Sbjct: 195 EPDVVTYSTLVDALCKEGMISKAVETVDMMRKQGIEPNVVTYSTLVDAHCKQGMVSEAND 254

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           + D M+++G+EP V TY  L
Sbjct: 255 IVDTMIKRGIEPNVVTYNAL 274



 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 26/78 (33%), Positives = 44/78 (56%)
 Frame = +3

Query: 27  DVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRLY 206
           +V+ Y  L+   CK G + +A++  D M K+ IEP   T++ L+  L +     +A+   
Sbjct: 162 NVVMYNTLVDVLCKEGTISKAVETVDMMRKQGIEPDVVTYSTLVDALCKEGMISKAVETV 221

Query: 207 DVMLRKGVEPTVYTYRYL 260
           D+M ++G+EP V TY  L
Sbjct: 222 DMMRKQGIEPNVVTYSTL 239



 Score = 55.1 bits (131), Expect = 7e-07
 Identities = 22/77 (28%), Positives = 41/77 (53%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P  +T++ LI   C    + EA+ ++DEM ++  +P    +N ++KGL +   T  A+ 
Sbjct: 20  EPSAVTFSTLINGLCNQSKISEAVCMFDEMTERGYQPNLIAYNIVLKGLCKTGNTGRAVM 79

Query: 201 LYDVMLRKGVEPTVYTY 251
              +M  +G EP +  Y
Sbjct: 80  FLRLMESRGYEPDIVAY 96



 Score = 55.1 bits (131), Expect = 7e-07
 Identities = 27/80 (33%), Positives = 43/80 (53%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +PD++ Y  ++   CK+G++ EALDL+ E+  K I P   T+  LI G+    +  EA R
Sbjct: 90  EPDIVAYNTILDCLCKNGLLKEALDLFSEVKVKGIRPDISTYTCLIHGMCNSGQQGEATR 149

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           L + M+   +   V  Y  L
Sbjct: 150 LLNEMVDNNISLNVVMYNTL 169



 Score = 54.7 bits (130), Expect = 9e-07
 Identities = 29/79 (36%), Positives = 41/79 (51%)
 Frame = +3

Query: 24  PDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALRL 203
           PD+ TYT LI   C  G  GEA  L +EM   +I      +N L+  L +     +A+  
Sbjct: 126 PDISTYTCLIHGMCNSGQQGEATRLLNEMVDNNISLNVVMYNTLVDVLCKEGTISKAVET 185

Query: 204 YDVMLRKGVEPTVYTYRYL 260
            D+M ++G+EP V TY  L
Sbjct: 186 VDMMRKQGIEPDVVTYSTL 204



 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 26/80 (32%), Positives = 42/80 (52%)
 Frame = +3

Query: 21  DPDVITYTILIGAHCKHGMVGEALDLYDEMCKKDIEPTYFTFNFLIKGLGRVNRTREALR 200
           +P+V+TY  L+  HC    + +A  +++ M +K   P   T+N +I G  +  R  EA+ 
Sbjct: 265 EPNVVTYNALVNGHCLQNKMDKARRVFNLMIEKGCAPNIVTYNTMINGYCKGKRLDEAME 324

Query: 201 LYDVMLRKGVEPTVYTYRYL 260
           L+  + RKG  P   TY  L
Sbjct: 325 LFHEISRKGPIPDTVTYNTL 344