BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00022823
         (277 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KQK03869.1 hypothetical protein BRADI_2g10311, partial [Brachypo...    58   6e-08
XP_017182260.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   1e-07
XP_017977522.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   2e-07
EOY07879.1 Pentatricopeptide repeat superfamily protein, putativ...    57   2e-07
KVH95640.1 hypothetical protein Ccrd_002310 [Cynara cardunculus ...    56   3e-07
XP_006826435.2 PREDICTED: pentatricopeptide repeat-containing pr...    56   4e-07
ERM93672.1 hypothetical protein AMTR_s00004p00168920 [Amborella ...    56   5e-07
XP_018501750.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   5e-07
XP_009337506.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   5e-07
XP_018506772.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   5e-07
XP_006838107.1 PREDICTED: pentatricopeptide repeat-containing pr...    55   1e-06
4OZS_A Chain A, Rna Binding Protein                                    53   2e-06
XP_006856875.1 PREDICTED: pentatricopeptide repeat-containing pr...    52   3e-06
XP_006399994.1 hypothetical protein EUTSA_v10012597mg [Eutrema s...    54   3e-06
EMT18607.1 hypothetical protein F775_09904 [Aegilops tauschii]         53   4e-06
XP_020183885.1 putative pentatricopeptide repeat-containing prot...    53   4e-06
XP_017421820.1 PREDICTED: putative pentatricopeptide repeat-cont...    53   4e-06
XP_006289420.1 hypothetical protein CARUB_v10002919mg [Capsella ...    53   4e-06
XP_006856874.1 PREDICTED: pentatricopeptide repeat-containing pr...    53   5e-06
XP_001777347.1 predicted protein [Physcomitrella patens] EDQ5787...    53   5e-06

>KQK03869.1 hypothetical protein BRADI_2g10311, partial [Brachypodium
           distachyon]
          Length = 327

 Score = 58.2 bits (139), Expect = 6e-08
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3   PNALTCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRL 182
           PN +TCTAL+K L   GR     +++  M  +G+ P  V+Y + M     +    E V L
Sbjct: 150 PNVVTCTALVKGLCTIGRVHHARIVIKHMVNLGIVPNVVTYTTLMSGLCKEGRMGEAVGL 209

Query: 183 LEEMGEQNERP-DFLYGRFINRVTKSGNLCD 272
           L EM +Q  +P +F Y   +N + K G L D
Sbjct: 210 LGEMQQQGVKPNEFTYSTLLNGLCKEGRLDD 240


>XP_017182260.1 PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Malus domestica]
          Length = 1004

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = +3

Query: 15  TCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRLLEEM 194
           TC A+   + K GR ++  VLL EM  MG  P   +Y   ++ +  +KN V+   LL EM
Sbjct: 380 TCNAIFAGMCKVGRMEKAEVLLNEMNVMGTRPNAQTYKFLIDGYCREKNMVKACELLNEM 439

Query: 195 GEQNERPD-FLYGRFINRVTKSGNL 266
            ++N  P  F YG  IN +++ G++
Sbjct: 440 KKRNFAPGVFTYGAIINGLSRRGDM 464


>XP_017977522.1 PREDICTED: pentatricopeptide repeat-containing protein At2g32630
           [Theobroma cacao]
          Length = 616

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3   PNALTCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRL 182
           P+  T   +   ++K  R +E    L  M E GV P  V++ + ++IH  + NFVE  RL
Sbjct: 423 PDVFTYNTIASGMSKLKRHEEAKRWLFMMVEKGVTPNVVNFTTLIDIHCKEGNFVEAKRL 482

Query: 183 LEEMGEQNERPDFL-YGRFINRVTKSGNLCD 272
            ++M  + ERPD + Y   I+  TK G L D
Sbjct: 483 FQQMERRGERPDTITYNALIDGYTKKGKLKD 513


>EOY07879.1 Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 743

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3   PNALTCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRL 182
           P+  T   +   ++K  R +E    L  M E GV P  V++ + ++IH  + NFVE  RL
Sbjct: 423 PDVFTYNTIASGMSKLKRHEEAKRWLFMMVEKGVTPNVVNFTTLIDIHCKEGNFVEAKRL 482

Query: 183 LEEMGEQNERPDFL-YGRFINRVTKSGNLCD 272
            ++M  + ERPD + Y   I+  TK G L D
Sbjct: 483 FQQMERRGERPDTITYNALIDGYTKKGKLKD 513


>KVH95640.1 hypothetical protein Ccrd_002310 [Cynara cardunculus var. scolymus]
          Length = 1123

 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
 Frame = +3

Query: 15  TCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRLLEEM 194
           TCTAL+  L+K G+ +E    L EM +MG++P   SY + +  ++  K+    + + E+M
Sbjct: 351 TCTALLDGLSKEGKMKEAEEFLREMLKMGISPNVKSYTTLLHGYIKSKSITGAMNVWEQM 410

Query: 195 GEQNERPD-FLYGRFINRVTKSGNLCD 272
             +N +PD  LYG  I R+     L D
Sbjct: 411 EAKNYKPDLLLYGTLILRLCNDKKLED 437


>XP_006826435.2 PREDICTED: pentatricopeptide repeat-containing protein At4g28010
           [Amborella trichopoda]
          Length = 598

 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3   PNALTCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRL 182
           PN +T T LI  L+K GR ++   LLGEM   G+NP  V+Y + +    +K  F + + L
Sbjct: 89  PNIVTYTTLIDGLSKDGRTEQAMNLLGEMHRKGLNPDVVTYSAIVNGLCNKGLFDKAIEL 148

Query: 183 LEEMGEQNERPDFL-YGRFINRVTKSGNLCD 272
             EM E+   P+ + Y   I+ + K+G   D
Sbjct: 149 FHEMSEKRISPNVVTYSSLIHGLCKNGQWQD 179


>ERM93672.1 hypothetical protein AMTR_s00004p00168920 [Amborella trichopoda]
          Length = 735

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3   PNALTCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRL 182
           PN +T T LI  L+K GR ++   LLGEM   G+NP  V+Y + +    +K  F + + L
Sbjct: 226 PNIVTYTTLIDGLSKDGRTEQAMNLLGEMHRKGLNPDVVTYSAIVNGLCNKGLFDKAIEL 285

Query: 183 LEEMGEQNERPDFL-YGRFINRVTKSGNLCD 272
             EM E+   P+ + Y   I+ + K+G   D
Sbjct: 286 FHEMSEKRISPNVVTYSSLIHGLCKNGQWQD 316


>XP_018501750.1 PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Pyrus x bretschneideri]
          Length = 1026

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = +3

Query: 15  TCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRLLEEM 194
           TC A+   + K GR ++  VLL EM  MG  P   +Y   ++ +  ++N V+   LL EM
Sbjct: 380 TCNAIFAGMCKVGRMEKAEVLLNEMNVMGTRPNAQTYKFLIDGYCREQNMVKACELLNEM 439

Query: 195 GEQNERPD-FLYGRFINRVTKSGNL 266
            ++N  P  F YG  IN +++ G++
Sbjct: 440 KKRNFAPGVFTYGAIINGLSRCGDM 464


>XP_009337506.1 PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Pyrus x bretschneideri]
           XP_009337507.1 PREDICTED: pentatricopeptide
           repeat-containing protein At5g61990, mitochondrial-like
           [Pyrus x bretschneideri]
          Length = 1026

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = +3

Query: 15  TCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRLLEEM 194
           TC A+   + K GR ++  VLL EM  MG  P   +Y   ++ +  ++N V+   LL EM
Sbjct: 380 TCNAIFAGMCKVGRMEKAEVLLNEMNVMGTRPNAQTYKFLIDGYCREQNMVKACELLNEM 439

Query: 195 GEQNERPD-FLYGRFINRVTKSGNL 266
            ++N  P  F YG  IN +++ G++
Sbjct: 440 KKRNFAPGVFTYGAIINGLSRCGDM 464


>XP_018506772.1 PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Pyrus x bretschneideri]
          Length = 1026

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = +3

Query: 15  TCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRLLEEM 194
           TC A+   + K GR ++  VLL EM  MG  P   +Y   ++ +  ++N V+   LL EM
Sbjct: 380 TCNAIFAGMCKVGRMEKAEVLLNEMNVMGTRPNAQTYKFLIDGYCREQNMVKACELLNEM 439

Query: 195 GEQNERPD-FLYGRFINRVTKSGNL 266
            ++N  P  F YG  IN +++ G++
Sbjct: 440 KKRNFAPGVFTYGAIINGLSRCGDM 464


>XP_006838107.1 PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
            mitochondrial [Amborella trichopoda] ERN00676.1
            hypothetical protein AMTR_s00106p00044940 [Amborella
            trichopoda]
          Length = 1042

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3    PNALTCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRL 182
            PN +T T +I    K+G  ++   L GEM+E  V P  ++Y S +  H  + +  E +RL
Sbjct: 827  PNHVTYTTMIDGHCKAGNIKQAHRLFGEMQEREVFPNAITYTSLINGHCQEGDMGEALRL 886

Query: 183  LEEMGEQNERPD-FLYGRFINRVTKSGNLCD 272
             EEM  +  +PD   YG  I+ + K GNL +
Sbjct: 887  FEEMVARAIKPDEVTYGVLIHSLCKEGNLIE 917


>4OZS_A Chain A, Rna Binding Protein
          Length = 175

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   PNALTCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRL 182
           P+ +T   LI  L K+GR +E   L  EM+E GV P  V+Y + ++         E ++L
Sbjct: 35  PDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQL 94

Query: 183 LEEMGEQNERPDFL-YGRFINRVTKSGNL 266
            +EM E+  +PD + Y   I+ + K+G L
Sbjct: 95  FQEMKEKGVKPDVVTYNTLIDGLAKAGRL 123



 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   PNALTCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRL 182
           P+ +T   LI  L K+GR +E   L  EM+E GV P  V+Y + ++         E ++L
Sbjct: 70  PDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQL 129

Query: 183 LEEMGEQNERPDFL-YGRFINRVTKSGNL 266
            +EM E+  +PD + Y   I+ + K+G L
Sbjct: 130 FQEMKEKGVKPDVVTYNTLIDGLAKAGRL 158


>XP_006856875.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63070,
           mitochondrial [Amborella trichopoda] ERN18342.1
           hypothetical protein AMTR_s00055p00195590 [Amborella
           trichopoda]
          Length = 176

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   PNALTCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRL 182
           P+ +T   LI  L K GR +E   LLGE+   G+NP  V+Y + M     +    E + L
Sbjct: 55  PSVVTYNTLIDGLCKDGRIKEARALLGEVYHNGLNPNVVTYSTLMNTLFQRNMVEESLAL 114

Query: 183 LEEMGEQNERPDFL-YGRFINRVTKSGNL 266
            +EMG++  +PD + Y   IN +   G +
Sbjct: 115 HKEMGKRGCQPDVVTYNTLINGLYDGGRI 143


>XP_006399994.1 hypothetical protein EUTSA_v10012597mg [Eutrema salsugineum]
           ESQ41447.1 hypothetical protein EUTSA_v10012597mg
           [Eutrema salsugineum]
          Length = 938

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   PNALTCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRL 182
           PNA+T TAL+  L K+G       ++ +M E  V P  V+Y S +  ++ K    E + L
Sbjct: 362 PNAVTYTALVDGLCKAGNLSSAEFIIRQMLEKSVLPNVVTYSSMINGYVKKGMLEEAISL 421

Query: 183 LEEMGEQNERPD-FLYGRFINRVTKSG 260
           + +M +QN  P+ F YG  I+ + K+G
Sbjct: 422 MRKMEDQNVVPNSFTYGTVIDGLFKAG 448


>EMT18607.1 hypothetical protein F775_09904 [Aegilops tauschii]
          Length = 483

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
 Frame = +3

Query: 3   PNALTCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRL 182
           P+A T +ALIK L+ SGR ++ +++ GEMRE GV P  + + + ++ H    +    + L
Sbjct: 182 PDAYTYSALIKGLSSSGRMEDATMMFGEMRERGVKPNAIVFTTLIDAHCKDGDVKAGMDL 241

Query: 183 LEEMGEQNERPDFL-YGRFINRVTKSGN 263
            ++M  +   PD + Y   +N + ++ N
Sbjct: 242 YQDMRARGVMPDLVAYNALVNGLCRARN 269


>XP_020183885.1 putative pentatricopeptide repeat-containing protein At1g09680
           [Aegilops tauschii subsp. tauschii]
          Length = 609

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
 Frame = +3

Query: 3   PNALTCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRL 182
           P+A T +ALIK L+ SGR ++ +++ GEMRE GV P  + + + ++ H    +    + L
Sbjct: 308 PDAYTYSALIKGLSSSGRMEDATMMFGEMRERGVKPNAIVFTTLIDAHCKDGDVKAGMDL 367

Query: 183 LEEMGEQNERPDFL-YGRFINRVTKSGN 263
            ++M  +   PD + Y   +N + ++ N
Sbjct: 368 YQDMRARGVMPDLVAYNALVNGLCRARN 395


>XP_017421820.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial [Vigna angularis]
           XP_017421906.1 PREDICTED: putative pentatricopeptide
           repeat-containing protein At3g16890, mitochondrial
           [Vigna angularis] XP_017421987.1 PREDICTED: putative
           pentatricopeptide repeat-containing protein At3g16890,
           mitochondrial [Vigna angularis] BAT75162.1 hypothetical
           protein VIGAN_01297900 [Vigna angularis var. angularis]
          Length = 664

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   PNALTCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRL 182
           PNA+    LI+     G   +   LLG M++ GVNP   SY + ++IH       +  RL
Sbjct: 519 PNAVIYNILIRSFCAIGDVAKSVKLLGRMQKEGVNPDTYSYNALIQIHCRMNKVDKAKRL 578

Query: 183 LEEMGEQNERPD-FLYGRFINRVTKSGNL 266
              M      PD + YG FI  ++KSG L
Sbjct: 579 FYSMSRSGLNPDNYTYGAFIEVLSKSGRL 607


>XP_006289420.1 hypothetical protein CARUB_v10002919mg [Capsella rubella]
           EOA22318.1 hypothetical protein CARUB_v10002919mg
           [Capsella rubella]
          Length = 938

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   PNALTCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRL 182
           PN +T TAL+  L K+G       ++ +M E GV P  V+Y S +  ++ K    E + L
Sbjct: 362 PNVVTYTALLDGLCKAGDLSSAEFIITQMLEKGVLPNVVTYSSMINGYVKKGMLEEAISL 421

Query: 183 LEEMGEQNERPD-FLYGRFINRVTKSG 260
           + +M +QN  P+ F YG  I+ + K+G
Sbjct: 422 MRKMEDQNVVPNGFTYGTVIDGLFKAG 448


>XP_006856874.1 PREDICTED: pentatricopeptide repeat-containing protein At1g09900
           [Amborella trichopoda] ERN18341.1 hypothetical protein
           AMTR_s00055p00195550 [Amborella trichopoda]
          Length = 481

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3   PNALTCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRL 182
           PN +T  ALI  L K GR +E   LL EM   G+NP  V+Y + + +  ++    E + L
Sbjct: 323 PNIVTYNALIDGLCKDGRTKETMALLEEMGHNGLNPNVVTYSTLISVLCNRNKVEEALAL 382

Query: 183 LEEMGEQNERPD-FLYGRFINRVTKSGNLCD 272
            +EM  +  +PD  +Y   I+ + K G   D
Sbjct: 383 HKEMENKGCQPDVVMYNTLIDGLCKGGRTKD 413


>XP_001777347.1 predicted protein [Physcomitrella patens] EDQ57877.1 predicted
           protein [Physcomitrella patens]
          Length = 621

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   PNALTCTALIKELTKSGRAQEGSVLLGEMREMGVNPGFVSYFSTMEIHLHKKNFVEVVRL 182
           P+++T TAL+  L K+GR  +   LL EM+E GV PG V+Y + +       + VE   L
Sbjct: 217 PDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNL 276

Query: 183 LEEMGEQNERPDFL-YGRFINRVTKSGNL 266
           L+EM     +PD + Y   I  + K+  L
Sbjct: 277 LDEMKRNGCKPDVVTYSCLITGLIKASQL 305