BLASTX nr result
ID: Ephedra29_contig00022532
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00022532
(258 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAU66373.1 DNA mismatch repair protein MSH3, partial [Noccaea ca... 135 9e-39
BAD94621.1 putative DNA mismatch repair protein, partial [Arabid... 138 9e-38
XP_002867605.1 hypothetical protein ARALYDRAFT_492273 [Arabidops... 140 9e-37
XP_001758062.1 predicted protein [Physcomitrella patens] EDQ7730... 139 1e-36
XP_010934727.2 PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repa... 139 2e-36
CAB81364.1 putative DNA mismatch repair protein, partial [Arabid... 138 3e-36
CAA18172.1 putative DNA mismatch repair protein [Arabidopsis tha... 138 3e-36
OAO97457.1 MSH3 [Arabidopsis thaliana] 138 3e-36
NP_194284.2 homolog of DNA mismatch repair protein MSH3 [Arabido... 138 3e-36
KFK29055.1 hypothetical protein AALP_AA7G082800 [Arabis alpina] 138 4e-36
KFK29054.1 hypothetical protein AALP_AA7G082800 [Arabis alpina] 138 4e-36
ONK79683.1 uncharacterized protein A4U43_C01F8980 [Asparagus off... 137 6e-36
XP_020079713.1 DNA mismatch repair protein MSH3 isoform X3 [Anan... 137 6e-36
XP_020079711.1 DNA mismatch repair protein MSH3 isoform X1 [Anan... 137 6e-36
XP_008806883.1 PREDICTED: DNA mismatch repair protein MSH3 [Phoe... 137 8e-36
OAY71040.1 DNA mismatch repair protein MSH3 [Ananas comosus] 137 8e-36
GAQ86212.1 putative MutS homolog 3 [Klebsormidium flaccidum] 137 8e-36
KHN26663.1 DNA mismatch repair protein Msh3 [Glycine soja] 137 1e-35
XP_019088594.1 PREDICTED: DNA mismatch repair protein MSH3 isofo... 137 1e-35
XP_010035123.1 PREDICTED: DNA mismatch repair protein MSH3 [Euca... 137 1e-35
>JAU66373.1 DNA mismatch repair protein MSH3, partial [Noccaea caerulescens]
Length = 163
Score = 135 bits (339), Expect = 9e-39
Identities = 67/84 (79%), Positives = 68/84 (80%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLE L D FVPNDT L GE CQIITGPNMGGKSCYIRQVALI IMAQVGSFVPA
Sbjct: 55 RHPVLETILQDNFVPNDTNLHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPA 114
Query: 77 ESLELHVFDSVFTRMGASDSIQHG 6
+LHV D VFTRMG SDSIQHG
Sbjct: 115 SFAKLHVLDGVFTRMGCSDSIQHG 138
>BAD94621.1 putative DNA mismatch repair protein, partial [Arabidopsis
thaliana]
Length = 386
Score = 138 bits (348), Expect = 9e-38
Identities = 68/84 (80%), Positives = 70/84 (83%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLE L D FVPNDT+L GE CQIITGPNMGGKSCYIRQVALI IMAQVGSFVPA
Sbjct: 91 RHPVLETILQDNFVPNDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPA 150
Query: 77 ESLELHVFDSVFTRMGASDSIQHG 6
+LHV D VFTRMGASDSIQHG
Sbjct: 151 SFAKLHVLDGVFTRMGASDSIQHG 174
>XP_002867605.1 hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
lyrata] EFH43864.1 hypothetical protein ARALYDRAFT_492273
[Arabidopsis lyrata subsp. lyrata]
Length = 1078
Score = 140 bits (352), Expect = 9e-37
Identities = 69/84 (82%), Positives = 71/84 (84%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLE L D FVPNDT L GE CQIITGPNMGGKSCYIRQVALI IMAQVGSFVPA
Sbjct: 784 RHPVLETLLQDNFVPNDTSLHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPA 843
Query: 77 ESLELHVFDSVFTRMGASDSIQHG 6
S++LHV D VFTRMGASDSIQHG
Sbjct: 844 SSVKLHVLDGVFTRMGASDSIQHG 867
>XP_001758062.1 predicted protein [Physcomitrella patens] EDQ77304.1 predicted
protein [Physcomitrella patens]
Length = 1109
Score = 139 bits (351), Expect = 1e-36
Identities = 70/85 (82%), Positives = 74/85 (87%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVL+ATL DGFVPNDT LQ E CQIITGPNMGGKSCYIRQVALI IMAQVGS+VPA
Sbjct: 799 RHPVLDATLQDGFVPNDTYLQADKERCQIITGPNMGGKSCYIRQVALITIMAQVGSYVPA 858
Query: 77 ESLELHVFDSVFTRMGASDSIQHGS 3
S +LHV D+VFTRMGASDSIQ GS
Sbjct: 859 TSAKLHVCDAVFTRMGASDSIQKGS 883
>XP_010934727.2 PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH3
[Elaeis guineensis]
Length = 1115
Score = 139 bits (350), Expect = 2e-36
Identities = 67/84 (79%), Positives = 72/84 (85%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLE+ LGD FVPNDT L GE CQI+TGPNMGGKSCYIRQVALI IMAQVGSFVPA
Sbjct: 786 RHPVLESMLGDNFVPNDTNLHEDGEYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPA 845
Query: 77 ESLELHVFDSVFTRMGASDSIQHG 6
S +LHVFD ++TRMGASDSIQ G
Sbjct: 846 SSAKLHVFDGIYTRMGASDSIQQG 869
>CAB81364.1 putative DNA mismatch repair protein, partial [Arabidopsis thaliana]
Length = 1076
Score = 138 bits (348), Expect = 3e-36
Identities = 68/84 (80%), Positives = 70/84 (83%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLE L D FVPNDT+L GE CQIITGPNMGGKSCYIRQVALI IMAQVGSFVPA
Sbjct: 799 RHPVLETILQDNFVPNDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPA 858
Query: 77 ESLELHVFDSVFTRMGASDSIQHG 6
+LHV D VFTRMGASDSIQHG
Sbjct: 859 SFAKLHVLDGVFTRMGASDSIQHG 882
>CAA18172.1 putative DNA mismatch repair protein [Arabidopsis thaliana]
Length = 1076
Score = 138 bits (348), Expect = 3e-36
Identities = 68/84 (80%), Positives = 70/84 (83%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLE L D FVPNDT+L GE CQIITGPNMGGKSCYIRQVALI IMAQVGSFVPA
Sbjct: 799 RHPVLETILQDNFVPNDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPA 858
Query: 77 ESLELHVFDSVFTRMGASDSIQHG 6
+LHV D VFTRMGASDSIQHG
Sbjct: 859 SFAKLHVLDGVFTRMGASDSIQHG 882
>OAO97457.1 MSH3 [Arabidopsis thaliana]
Length = 1081
Score = 138 bits (348), Expect = 3e-36
Identities = 68/84 (80%), Positives = 70/84 (83%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLE L D FVPNDT+L GE CQIITGPNMGGKSCYIRQVALI IMAQVGSFVPA
Sbjct: 786 RHPVLETILQDNFVPNDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPA 845
Query: 77 ESLELHVFDSVFTRMGASDSIQHG 6
+LHV D VFTRMGASDSIQHG
Sbjct: 846 SFAKLHVLDGVFTRMGASDSIQHG 869
>NP_194284.2 homolog of DNA mismatch repair protein MSH3 [Arabidopsis thaliana]
O65607.2 RecName: Full=DNA mismatch repair protein MSH3;
Short=AtMSH3; AltName: Full=MutS protein homolog 3
CAA07684.1 Msh3 protein [Arabidopsis thaliana] AEE85075.1
homolog of DNA mismatch repair protein MSH3 [Arabidopsis
thaliana]
Length = 1081
Score = 138 bits (348), Expect = 3e-36
Identities = 68/84 (80%), Positives = 70/84 (83%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLE L D FVPNDT+L GE CQIITGPNMGGKSCYIRQVALI IMAQVGSFVPA
Sbjct: 786 RHPVLETILQDNFVPNDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPA 845
Query: 77 ESLELHVFDSVFTRMGASDSIQHG 6
+LHV D VFTRMGASDSIQHG
Sbjct: 846 SFAKLHVLDGVFTRMGASDSIQHG 869
>KFK29055.1 hypothetical protein AALP_AA7G082800 [Arabis alpina]
Length = 1038
Score = 138 bits (347), Expect = 4e-36
Identities = 69/84 (82%), Positives = 70/84 (83%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLE L D FVPNDT L GE CQIITGPNMGGKSCYIRQVALI IMAQVGSFVPA
Sbjct: 725 RHPVLETLLQDNFVPNDTSLHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPA 784
Query: 77 ESLELHVFDSVFTRMGASDSIQHG 6
S +LHV D VFTRMGASDSIQHG
Sbjct: 785 LSAKLHVLDGVFTRMGASDSIQHG 808
>KFK29054.1 hypothetical protein AALP_AA7G082800 [Arabis alpina]
Length = 1068
Score = 138 bits (347), Expect = 4e-36
Identities = 69/84 (82%), Positives = 70/84 (83%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLE L D FVPNDT L GE CQIITGPNMGGKSCYIRQVALI IMAQVGSFVPA
Sbjct: 755 RHPVLETLLQDNFVPNDTSLHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPA 814
Query: 77 ESLELHVFDSVFTRMGASDSIQHG 6
S +LHV D VFTRMGASDSIQHG
Sbjct: 815 LSAKLHVLDGVFTRMGASDSIQHG 838
>ONK79683.1 uncharacterized protein A4U43_C01F8980 [Asparagus officinalis]
Length = 1047
Score = 137 bits (346), Expect = 6e-36
Identities = 65/85 (76%), Positives = 71/85 (83%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVL+ LGD FVPNDT L G GE CQI+TGPNMGGKSCYIRQVALI IMAQVGSFVPA
Sbjct: 773 RHPVLDIVLGDNFVPNDTSLHGDGEYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPA 832
Query: 77 ESLELHVFDSVFTRMGASDSIQHGS 3
S +LHV D + TRMGASDS+Q G+
Sbjct: 833 SSAKLHVLDGILTRMGASDSVQQGT 857
>XP_020079713.1 DNA mismatch repair protein MSH3 isoform X3 [Ananas comosus]
Length = 1069
Score = 137 bits (346), Expect = 6e-36
Identities = 66/85 (77%), Positives = 71/85 (83%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLE+ LGDGFVPNDT L E CQI+TGPNMGGKSCYIRQVALI IMAQVGSFVPA
Sbjct: 754 RHPVLESLLGDGFVPNDTNLHADSEYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPA 813
Query: 77 ESLELHVFDSVFTRMGASDSIQHGS 3
S LHV D ++TRMGASDSIQ G+
Sbjct: 814 SSARLHVLDGIYTRMGASDSIQQGT 838
>XP_020079711.1 DNA mismatch repair protein MSH3 isoform X1 [Ananas comosus]
Length = 1102
Score = 137 bits (346), Expect = 6e-36
Identities = 66/85 (77%), Positives = 71/85 (83%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLE+ LGDGFVPNDT L E CQI+TGPNMGGKSCYIRQVALI IMAQVGSFVPA
Sbjct: 787 RHPVLESLLGDGFVPNDTNLHADSEYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPA 846
Query: 77 ESLELHVFDSVFTRMGASDSIQHGS 3
S LHV D ++TRMGASDSIQ G+
Sbjct: 847 SSARLHVLDGIYTRMGASDSIQQGT 871
>XP_008806883.1 PREDICTED: DNA mismatch repair protein MSH3 [Phoenix dactylifera]
Length = 1033
Score = 137 bits (345), Expect = 8e-36
Identities = 66/85 (77%), Positives = 72/85 (84%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLE+ LGD FVPNDT L GE CQI+TGPNMGGKSCYIRQVALI IMAQVGSFVPA
Sbjct: 715 RHPVLESILGDNFVPNDTNLHEDGEYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPA 774
Query: 77 ESLELHVFDSVFTRMGASDSIQHGS 3
S +LHV D ++TRMGASDSIQ G+
Sbjct: 775 SSAKLHVLDGIYTRMGASDSIQQGT 799
>OAY71040.1 DNA mismatch repair protein MSH3 [Ananas comosus]
Length = 1110
Score = 137 bits (345), Expect = 8e-36
Identities = 66/85 (77%), Positives = 71/85 (83%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLE+ LGDGFVPNDT L E CQI+TGPNMGGKSCYIRQVALI IMAQVGSFVPA
Sbjct: 795 RHPVLESLLGDGFVPNDTNLHADSEYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPA 854
Query: 77 ESLELHVFDSVFTRMGASDSIQHGS 3
S LHV D ++TRMGASDSIQ G+
Sbjct: 855 SSATLHVLDGIYTRMGASDSIQQGT 879
>GAQ86212.1 putative MutS homolog 3 [Klebsormidium flaccidum]
Length = 1256
Score = 137 bits (345), Expect = 8e-36
Identities = 69/84 (82%), Positives = 72/84 (85%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLEATL D FVPNDT L GE CQIITGPNMGGKS YIRQVALIVIMAQ+GSFVPA
Sbjct: 917 RHPVLEATLKDNFVPNDTCLTATGERCQIITGPNMGGKSVYIRQVALIVIMAQMGSFVPA 976
Query: 77 ESLELHVFDSVFTRMGASDSIQHG 6
+S LHVFD+V TRMGASDSIQ G
Sbjct: 977 DSATLHVFDNVHTRMGASDSIQRG 1000
>KHN26663.1 DNA mismatch repair protein Msh3 [Glycine soja]
Length = 1016
Score = 137 bits (344), Expect = 1e-35
Identities = 66/84 (78%), Positives = 71/84 (84%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLE TL D FVPNDT + GE CQI+TGPNMGGKSCYIRQVALIVIMAQVGSFVPA
Sbjct: 706 RHPVLETTLQDNFVPNDTNMHADGEYCQIVTGPNMGGKSCYIRQVALIVIMAQVGSFVPA 765
Query: 77 ESLELHVFDSVFTRMGASDSIQHG 6
S +LHV D ++TRMGASDSIQ G
Sbjct: 766 SSAKLHVLDRIYTRMGASDSIQQG 789
>XP_019088594.1 PREDICTED: DNA mismatch repair protein MSH3 isoform X2 [Camelina
sativa]
Length = 1070
Score = 137 bits (344), Expect = 1e-35
Identities = 68/84 (80%), Positives = 69/84 (82%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLE L D FVPNDT L GE CQIITGPNMGGKSCYIRQVALI IMAQVGSFVPA
Sbjct: 762 RHPVLETILQDNFVPNDTSLHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPA 821
Query: 77 ESLELHVFDSVFTRMGASDSIQHG 6
+LHV D VFTRMGASDSIQHG
Sbjct: 822 SFAKLHVLDGVFTRMGASDSIQHG 845
>XP_010035123.1 PREDICTED: DNA mismatch repair protein MSH3 [Eucalyptus grandis]
Length = 1093
Score = 137 bits (344), Expect = 1e-35
Identities = 67/84 (79%), Positives = 71/84 (84%)
Frame = -2
Query: 257 RHPVLEATLGDGFVPNDTLLQGMGECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPA 78
RHPVLE +L D FVPNDT L G GE CQIITGPNMGGKSCYIRQVALI IMAQVGSFVPA
Sbjct: 776 RHPVLETSLLDNFVPNDTNLHGNGEFCQIITGPNMGGKSCYIRQVALIAIMAQVGSFVPA 835
Query: 77 ESLELHVFDSVFTRMGASDSIQHG 6
S +LHV D ++TRMGASDSIQ G
Sbjct: 836 SSAKLHVLDGIYTRMGASDSIQKG 859