BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00022505
         (810 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJA90765.1 Dicer-like 3 [Ephedra trifurca]                            527   e-172
AJA90780.1 Dicer-like 3 [Pinus canariensis]                           211   2e-58
AJA90772.1 Dicer-like 3 [Ginkgo biloba]                               211   2e-58
AJP06283.1 DCL3a [Pinus tabuliformis]                                 210   3e-58
AJA90756.1 Dicer-like 3 [Cycas revoluta]                              192   5e-52
AJP06284.1 DCL3b [Pinus tabuliformis]                                 188   1e-50
XP_011002830.1 PREDICTED: endoribonuclease Dicer homolog 3-like ...   170   3e-44
XP_011002834.1 PREDICTED: endoribonuclease Dicer homolog 3a-like...   169   4e-44
XP_011002832.1 PREDICTED: endoribonuclease Dicer homolog 3-like ...   169   4e-44
XP_011002831.1 PREDICTED: endoribonuclease Dicer homolog 3-like ...   169   4e-44
XP_011002828.1 PREDICTED: endoribonuclease Dicer homolog 3-like ...   169   4e-44
XP_016753177.1 PREDICTED: endoribonuclease Dicer homolog 3a-like...   169   7e-44
XP_016753176.1 PREDICTED: endoribonuclease Dicer homolog 3-like ...   169   7e-44
KJB65397.1 hypothetical protein B456_010G093100 [Gossypium raimo...   169   7e-44
NP_001313825.1 endoribonuclease Dicer homolog 3-like [Gossypium ...   169   7e-44
XP_016753175.1 PREDICTED: endoribonuclease Dicer homolog 3-like ...   169   7e-44
KJB65398.1 hypothetical protein B456_010G093100 [Gossypium raimo...   169   7e-44
XP_012450063.1 PREDICTED: endoribonuclease Dicer homolog 3 isofo...   169   7e-44
XP_012450061.1 PREDICTED: endoribonuclease Dicer homolog 3 isofo...   169   7e-44
KJB65395.1 hypothetical protein B456_010G093100 [Gossypium raimo...   168   9e-44

>AJA90765.1 Dicer-like 3 [Ephedra trifurca]
          Length = 1678

 Score =  527 bits (1358), Expect = e-172
 Identities = 263/269 (97%), Positives = 265/269 (98%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISITGTTKRKELHSTTQPTGFCG 630
            LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKI ITGTTKRKELHSTTQPTGFCG
Sbjct: 681  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKIPITGTTKRKELHSTTQPTGFCG 740

Query: 629  SWLYSTDYVTLHMYKLSFSGKNNIDLHANLALLVESELEDDVAKTEMDLYLTRGRVVKLQ 450
            SWLYSTDYVTLHMYKLSFSGKNN DLHANLALLVESELEDDVAKTEMDLYLTRGRVVKLQ
Sbjct: 741  SWLYSTDYVTLHMYKLSFSGKNNKDLHANLALLVESELEDDVAKTEMDLYLTRGRVVKLQ 800

Query: 449  FISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREKAKGDIAIIRSIYENNQVENLWIK 270
            FISCGKLSLTPRQIKDAKTFQE+SFNGMFGRLIKREKAKGDIAIIRSIYENNQVENLWIK
Sbjct: 801  FISCGKLSLTPRQIKDAKTFQEVSFNGMFGRLIKREKAKGDIAIIRSIYENNQVENLWIK 860

Query: 269  NNMYLLIPLEQGNVYDAQIDWKSIAECAKVAKYFCQPAAQVESCLESTDLLNLADSQVRP 90
            NNMYLLIPLEQGNVYDAQIDWKSIAECAKVA YFCQPA QVESCLEST+LLNLADSQVRP
Sbjct: 861  NNMYLLIPLEQGNVYDAQIDWKSIAECAKVATYFCQPAVQVESCLESTELLNLADSQVRP 920

Query: 89   SDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
            SDLIGKAIMTIHTGKIYSTVGLLNDKTAQ
Sbjct: 921  SDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 949


>AJA90780.1 Dicer-like 3 [Pinus canariensis]
          Length = 1803

 Score =  211 bits (536), Expect = 2e-58
 Identities = 115/275 (41%), Positives = 171/275 (62%), Gaps = 6/275 (2%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISITGTTKRKELHSTTQPTGFCG 630
            LEA K+LH++G +DD L  +     + EE   S  K  +  GTTKRKELH+  +    CG
Sbjct: 720  LEACKRLHEVGAVDDYLIPITEAVPEEEETVNSKGKNTTGAGTTKRKELHAKAKAKALCG 779

Query: 629  SWLYSTDYVTLHMYKLSFSGKNNID-LHANLALLVESELEDDVAKTEMDLYLTRGRVVKL 453
            SW    + V L +YKL F  ++N +  +A+ AL +E  L+DDVA  E+DL+LT GRVVK 
Sbjct: 780  SWGKELNGVVLQIYKLVFMAQDNDEKAYADFALFIEGTLDDDVANAEIDLHLTAGRVVKA 839

Query: 452  QFISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREKAKGDI-AIIRSIYENNQVENLW 276
            +F   GK+ L   QI DAK FQEI +NG+F +LIKR K+   +  ++++I    +++  W
Sbjct: 840  RFAPSGKMYLNSIQITDAKVFQEILYNGIFDKLIKRTKSSNGVDVVMKNILGTKKIKRAW 899

Query: 275  IKNNMYLLIPLE--QGNVYDAQ--IDWKSIAECAKVAKYFCQPAAQVESCLESTDLLNLA 108
              +N+Y L+PLE  +G+ +D +  IDWK I++CA VA+ F     +++   + +  + LA
Sbjct: 900  ASSNIYFLLPLESNKGSFHDTKVNIDWKCISKCADVARAFEYYRTKLQVGEDDSSGIYLA 959

Query: 107  DSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
               +  +DLI KAI+TIHTGKIY    +L+DKTA+
Sbjct: 960  SGPILTADLIDKAIVTIHTGKIYCVTDVLHDKTAE 994


>AJA90772.1 Dicer-like 3 [Ginkgo biloba]
          Length = 1815

 Score =  211 bits (536), Expect = 2e-58
 Identities = 125/287 (43%), Positives = 180/287 (62%), Gaps = 18/287 (6%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISITGTTKRKELHSTTQPTGFCG 630
            LEA K+LH++G +DD+L  +     + EE+     +K +  GTTKRKELH T +     G
Sbjct: 691  LEACKRLHEIGALDDHLLPVAEAGSEEEEVMNFKGEKTTGAGTTKRKELHPTCKAKALSG 750

Query: 629  SWLYSTDYVTLHMYKLSFSGKNNID-LHANLALLVESELEDDVAKTEMDLYLTRGRVVKL 453
            SW+   + VTL +YK+ F+ ++N +  +A+ ALL+E+ L+DD+A TE++L+LT GRVVK 
Sbjct: 751  SWVEDLNGVTLQIYKMVFTPQDNDEGAYADFALLIETVLDDDIASTEIELHLTAGRVVKS 810

Query: 452  QFISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKR-EKAKGDIAIIRSIYENNQVENLW 276
             FI CGKL L   Q+KDAK FQE+  NG+FG+LI+R +K+    A++        +E+ W
Sbjct: 811  IFIPCGKLQLNSVQLKDAKVFQEVLCNGIFGKLIRRPKKSNVSKAVMMDSGGAKIMESKW 870

Query: 275  IKNNMYLLIPLE--QGNV--YDAQIDWKSIAECAKVAKYFCQPA-AQVESC-LESTDLL- 117
            + +NMYLL+PLE  +G V   +  IDWK I+ CA VA+ F   + +  + C  + TDLL 
Sbjct: 871  VTSNMYLLLPLELHEGGVSPTEVNIDWKCISNCADVARSFKSGSWSNDDPCRRDGTDLLL 930

Query: 116  ---------NLADSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
                      LA      SDLI KAI+TIHTGKIY   G+++DKTA+
Sbjct: 931  TGVGDSRSICLASGFQSVSDLIDKAIVTIHTGKIYCVTGVIHDKTAE 977


>AJP06283.1 DCL3a [Pinus tabuliformis]
          Length = 1871

 Score =  210 bits (534), Expect = 3e-58
 Identities = 115/275 (41%), Positives = 171/275 (62%), Gaps = 6/275 (2%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISITGTTKRKELHSTTQPTGFCG 630
            LEA K+LH++G +DD L  +     + EE   S  K  +  GTTKRKELH+  +    CG
Sbjct: 717  LEACKRLHEVGAVDDYLIPITEAVPEEEEPVNSKGKNTTGAGTTKRKELHAKAKAKALCG 776

Query: 629  SWLYSTDYVTLHMYKLSFSGKNNID-LHANLALLVESELEDDVAKTEMDLYLTRGRVVKL 453
            SW    + V L +YKL F  ++N +  +A+ AL +E  L+DDVA  E+DL+LT GRVVK 
Sbjct: 777  SWGKELNGVVLQIYKLVFMAQDNDEKAYADFALFIEGTLDDDVANAEIDLHLTAGRVVKA 836

Query: 452  QFISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREKAKGDI-AIIRSIYENNQVENLW 276
            +F   GK+ L   QI DAK FQEI +NG+F +LIKR K+   +  ++++I    +++  W
Sbjct: 837  RFAPSGKMYLNSIQITDAKAFQEILYNGIFDKLIKRTKSSNGVDVVMKNILGTKKIKRAW 896

Query: 275  IKNNMYLLIPLE--QGNVYDAQ--IDWKSIAECAKVAKYFCQPAAQVESCLESTDLLNLA 108
              +N+Y L+PLE  +G+ +D +  IDWK I++CA VA+ F     +++   + +  + LA
Sbjct: 897  ASSNIYFLLPLESNKGSFHDTKVNIDWKCISKCADVARAFEYYRTKLQVGEDDSSGIYLA 956

Query: 107  DSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
               +  +DLI KAI+TIHTGKIY    +L+DKTA+
Sbjct: 957  SGPILTADLIDKAIVTIHTGKIYCVTDVLHDKTAE 991


>AJA90756.1 Dicer-like 3 [Cycas revoluta]
          Length = 1876

 Score =  192 bits (488), Expect = 5e-52
 Identities = 111/295 (37%), Positives = 171/295 (57%), Gaps = 26/295 (8%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISITGTTKRKELHSTTQPTGFCG 630
            LEA K+LH  G +D+ L  +     + EE+  +G K  +  GTT+RKELHSTT+     G
Sbjct: 668  LEACKRLHAAGALDEYLQPVTEVMPEEEEMMNTGGKMSTGPGTTRRKELHSTTKADALFG 727

Query: 629  SWLYSTDYVTLHMYKLSFSGKNNIDL-HANLALLVESELEDDVAKTEMDLYLTRGRVVKL 453
            SW      VTLH+YKL F+ + N +  +AN ALL+E+ L+DDVA  E+DL+LT GR++  
Sbjct: 728  SWGEEFTGVTLHVYKLVFTPQCNEEREYANFALLIEAVLDDDVASAEVDLFLTAGRIICS 787

Query: 452  QFISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKR-EKAKGDIAIIRSIYENNQVENLW 276
            +F+  G++ L   Q+KDAK FQEI  NG+FG+L+   +K+ G   + ++ ++  ++++ W
Sbjct: 788  KFLQSGEMRLDSSQLKDAKAFQEILSNGIFGKLMYHPKKSDGPKNVTQNSFKTMEMKSQW 847

Query: 275  IKNNMYLLIPLEQGNV----YDAQIDWKSIAECAKVAKYF-----CQPAAQVESCLES-- 129
            + +NMYLL+PL+   +     +  IDW+ I+ CA  A+ F      +    V   LE   
Sbjct: 848  VASNMYLLLPLKSDKIEASEKEVNIDWRCISRCASGARLFKFLSCSEKENGVRDILEEIL 907

Query: 128  -------------TDLLNLADSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
                         T ++ LA      SDL+ KA++ +HTGKIY    +L+DKTA+
Sbjct: 908  VDQTTLLQCGADPTQVIRLASGPQMVSDLMDKAVIAVHTGKIYCIRQVLDDKTAE 962


>AJP06284.1 DCL3b [Pinus tabuliformis]
          Length = 1792

 Score =  188 bits (478), Expect = 1e-50
 Identities = 112/294 (38%), Positives = 166/294 (56%), Gaps = 26/294 (8%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISITGTTKRKELHSTTQPTGFCG 630
            LEA K+LH++G +D++L  +  +  + EEI  S  K  +  GTTKRKELHS+ +     G
Sbjct: 665  LEACKKLHEVGALDEHLQPVTEDLPEEEEIMNSSGKMTTDAGTTKRKELHSS-KAYALSG 723

Query: 629  SWLYSTDYVTLHMYKLSFSGKNNID-LHANLALLVESELEDDVAKTEMDLYLTRGRVVKL 453
            +W  +   VTL +YKL F+ + N +  +AN  LL+E  L++D++  E DL+LT GRVVK 
Sbjct: 724  TWGENLSGVTLQVYKLYFTSRCNEERTYANFVLLIEEMLDEDISNVETDLFLTGGRVVKS 783

Query: 452  QFISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREK-AKGDIAIIRSIYENNQVENLW 276
              + CG + L   Q+KDAK F E  FNG+F +L+ R+K ++G     ++  +  +++NLW
Sbjct: 784  SLLHCGDMKLDTSQMKDAKAFHETLFNGVFAKLLCRDKQSEGSRVEGKNCLKIMEMKNLW 843

Query: 275  IKNNMYLLIPLEQGNV----YDAQIDWKSIAECAKVAKYF-------------------- 168
            + +NMY L+P+E   +     +A IDWK I  CA  A  F                    
Sbjct: 844  VSSNMYFLLPVEADKIGASQREAIIDWKCIRSCASGATLFKYLFVSETDNNVRDLLEVLL 903

Query: 167  CQPAAQVESCLESTDLLNLADSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTA 6
             +   Q   C E T  + LA    + SDLI +AI+T+HTGKIYS + +  DKTA
Sbjct: 904  NRTHLQYSDCKEGT--ITLASGIHKASDLIDRAIVTLHTGKIYSVMEVSRDKTA 955


>XP_011002830.1 PREDICTED: endoribonuclease Dicer homolog 3-like isoform X2 [Populus
            euphratica]
          Length = 1669

 Score =  170 bits (430), Expect = 3e-44
 Identities = 106/290 (36%), Positives = 147/290 (50%), Gaps = 21/290 (7%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISI-TGTTKRKELHSTTQPTGFC 633
            LEA K+LHQ+G +DD   HLL   E+  EI     K  S   GTTKRKELH TT      
Sbjct: 664  LEACKKLHQMGALDD---HLLPSVEEPSEIAVVKSKSTSAGAGTTKRKELHGTTCIRALS 720

Query: 632  GSWLYSTDYVTLHMYKLSFSGKNNIDLHANLALLVESELEDDVAKTEMDLYLTRGRVVKL 453
            GSW    D  T H YK  FS     ++++   LL+ES+L+DDV   E+DLYL   ++VK 
Sbjct: 721  GSWGEKLDGATFHAYKFDFSCSIVSEIYSGFILLIESKLDDDVGNIELDLYLV-AKIVKS 779

Query: 452  QFISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREKAKGDIAIIRSIYENNQVENLWI 273
               SCG + L   Q+  AK FQE  FNG+FG+L    K+       R      +  +LW 
Sbjct: 780  SISSCGVVHLDAAQMMKAKRFQEFFFNGLFGKLFTGSKSS------REFLLQKETTSLWS 833

Query: 272  KNNMYLLIPLEQGNVYDA---QIDWKSIAECAKVAKYFCQPAAQVESC------------ 138
             +NMYLL+PLE  ++      +IDWK I  C+ V  Y         S             
Sbjct: 834  PSNMYLLLPLEPWSISSNDWWKIDWKGIEACSSVVVYLKNSFLAARSYSGGGNPLPDNVL 893

Query: 137  -----LESTDLLNLADSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
                    T+L++ A++ V   ++    ++ IHTG+IYS V ++ND +A+
Sbjct: 894  PSTKECNGTNLIHFANALVNVENIKEMVVLAIHTGRIYSIVKVVNDSSAE 943


>XP_011002834.1 PREDICTED: endoribonuclease Dicer homolog 3a-like isoform X5 [Populus
            euphratica]
          Length = 1448

 Score =  169 bits (429), Expect = 4e-44
 Identities = 106/292 (36%), Positives = 148/292 (50%), Gaps = 23/292 (7%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISI---TGTTKRKELHSTTQPTG 639
            LEA K+LHQ+G +DD   HLL   E+  EI     K  S    +GTTKRKELH TT    
Sbjct: 441  LEACKKLHQMGALDD---HLLPSVEEPSEIAVVKSKSTSAGAGSGTTKRKELHGTTCIRA 497

Query: 638  FCGSWLYSTDYVTLHMYKLSFSGKNNIDLHANLALLVESELEDDVAKTEMDLYLTRGRVV 459
              GSW    D  T H YK  FS     ++++   LL+ES+L+DDV   E+DLYL   ++V
Sbjct: 498  LSGSWGEKLDGATFHAYKFDFSCSIVSEIYSGFILLIESKLDDDVGNIELDLYLV-AKIV 556

Query: 458  KLQFISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREKAKGDIAIIRSIYENNQVENL 279
            K    SCG + L   Q+  AK FQE  FNG+FG+L    K+       R      +  +L
Sbjct: 557  KSSISSCGVVHLDAAQMMKAKRFQEFFFNGLFGKLFTGSKSS------REFLLQKETTSL 610

Query: 278  WIKNNMYLLIPLEQGNVYDA---QIDWKSIAECAKVAKYFCQPAAQVESC---------- 138
            W  +NMYLL+PLE  ++      +IDWK I  C+ V  Y         S           
Sbjct: 611  WSPSNMYLLLPLEPWSISSNDWWKIDWKGIEACSSVVVYLKNSFLAARSYSGGGNPLPDN 670

Query: 137  -------LESTDLLNLADSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
                      T+L++ A++ V   ++    ++ IHTG+IYS V ++ND +A+
Sbjct: 671  VLPSTKECNGTNLIHFANALVNVENIKEMVVLAIHTGRIYSIVKVVNDSSAE 722


>XP_011002832.1 PREDICTED: endoribonuclease Dicer homolog 3-like isoform X4 [Populus
            euphratica]
          Length = 1633

 Score =  169 bits (429), Expect = 4e-44
 Identities = 106/292 (36%), Positives = 148/292 (50%), Gaps = 23/292 (7%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISI---TGTTKRKELHSTTQPTG 639
            LEA K+LHQ+G +DD   HLL   E+  EI     K  S    +GTTKRKELH TT    
Sbjct: 626  LEACKKLHQMGALDD---HLLPSVEEPSEIAVVKSKSTSAGAGSGTTKRKELHGTTCIRA 682

Query: 638  FCGSWLYSTDYVTLHMYKLSFSGKNNIDLHANLALLVESELEDDVAKTEMDLYLTRGRVV 459
              GSW    D  T H YK  FS     ++++   LL+ES+L+DDV   E+DLYL   ++V
Sbjct: 683  LSGSWGEKLDGATFHAYKFDFSCSIVSEIYSGFILLIESKLDDDVGNIELDLYLV-AKIV 741

Query: 458  KLQFISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREKAKGDIAIIRSIYENNQVENL 279
            K    SCG + L   Q+  AK FQE  FNG+FG+L    K+       R      +  +L
Sbjct: 742  KSSISSCGVVHLDAAQMMKAKRFQEFFFNGLFGKLFTGSKSS------REFLLQKETTSL 795

Query: 278  WIKNNMYLLIPLEQGNVYDA---QIDWKSIAECAKVAKYFCQPAAQVESC---------- 138
            W  +NMYLL+PLE  ++      +IDWK I  C+ V  Y         S           
Sbjct: 796  WSPSNMYLLLPLEPWSISSNDWWKIDWKGIEACSSVVVYLKNSFLAARSYSGGGNPLPDN 855

Query: 137  -------LESTDLLNLADSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
                      T+L++ A++ V   ++    ++ IHTG+IYS V ++ND +A+
Sbjct: 856  VLPSTKECNGTNLIHFANALVNVENIKEMVVLAIHTGRIYSIVKVVNDSSAE 907


>XP_011002831.1 PREDICTED: endoribonuclease Dicer homolog 3-like isoform X3 [Populus
            euphratica]
          Length = 1654

 Score =  169 bits (429), Expect = 4e-44
 Identities = 106/292 (36%), Positives = 148/292 (50%), Gaps = 23/292 (7%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISI---TGTTKRKELHSTTQPTG 639
            LEA K+LHQ+G +DD   HLL   E+  EI     K  S    +GTTKRKELH TT    
Sbjct: 647  LEACKKLHQMGALDD---HLLPSVEEPSEIAVVKSKSTSAGAGSGTTKRKELHGTTCIRA 703

Query: 638  FCGSWLYSTDYVTLHMYKLSFSGKNNIDLHANLALLVESELEDDVAKTEMDLYLTRGRVV 459
              GSW    D  T H YK  FS     ++++   LL+ES+L+DDV   E+DLYL   ++V
Sbjct: 704  LSGSWGEKLDGATFHAYKFDFSCSIVSEIYSGFILLIESKLDDDVGNIELDLYLV-AKIV 762

Query: 458  KLQFISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREKAKGDIAIIRSIYENNQVENL 279
            K    SCG + L   Q+  AK FQE  FNG+FG+L    K+       R      +  +L
Sbjct: 763  KSSISSCGVVHLDAAQMMKAKRFQEFFFNGLFGKLFTGSKSS------REFLLQKETTSL 816

Query: 278  WIKNNMYLLIPLEQGNVYDA---QIDWKSIAECAKVAKYFCQPAAQVESC---------- 138
            W  +NMYLL+PLE  ++      +IDWK I  C+ V  Y         S           
Sbjct: 817  WSPSNMYLLLPLEPWSISSNDWWKIDWKGIEACSSVVVYLKNSFLAARSYSGGGNPLPDN 876

Query: 137  -------LESTDLLNLADSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
                      T+L++ A++ V   ++    ++ IHTG+IYS V ++ND +A+
Sbjct: 877  VLPSTKECNGTNLIHFANALVNVENIKEMVVLAIHTGRIYSIVKVVNDSSAE 928


>XP_011002828.1 PREDICTED: endoribonuclease Dicer homolog 3-like isoform X1 [Populus
            euphratica] XP_011002829.1 PREDICTED: endoribonuclease
            Dicer homolog 3-like isoform X1 [Populus euphratica]
          Length = 1671

 Score =  169 bits (429), Expect = 4e-44
 Identities = 106/292 (36%), Positives = 148/292 (50%), Gaps = 23/292 (7%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISI---TGTTKRKELHSTTQPTG 639
            LEA K+LHQ+G +DD   HLL   E+  EI     K  S    +GTTKRKELH TT    
Sbjct: 664  LEACKKLHQMGALDD---HLLPSVEEPSEIAVVKSKSTSAGAGSGTTKRKELHGTTCIRA 720

Query: 638  FCGSWLYSTDYVTLHMYKLSFSGKNNIDLHANLALLVESELEDDVAKTEMDLYLTRGRVV 459
              GSW    D  T H YK  FS     ++++   LL+ES+L+DDV   E+DLYL   ++V
Sbjct: 721  LSGSWGEKLDGATFHAYKFDFSCSIVSEIYSGFILLIESKLDDDVGNIELDLYLV-AKIV 779

Query: 458  KLQFISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREKAKGDIAIIRSIYENNQVENL 279
            K    SCG + L   Q+  AK FQE  FNG+FG+L    K+       R      +  +L
Sbjct: 780  KSSISSCGVVHLDAAQMMKAKRFQEFFFNGLFGKLFTGSKSS------REFLLQKETTSL 833

Query: 278  WIKNNMYLLIPLEQGNVYDA---QIDWKSIAECAKVAKYFCQPAAQVESC---------- 138
            W  +NMYLL+PLE  ++      +IDWK I  C+ V  Y         S           
Sbjct: 834  WSPSNMYLLLPLEPWSISSNDWWKIDWKGIEACSSVVVYLKNSFLAARSYSGGGNPLPDN 893

Query: 137  -------LESTDLLNLADSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
                      T+L++ A++ V   ++    ++ IHTG+IYS V ++ND +A+
Sbjct: 894  VLPSTKECNGTNLIHFANALVNVENIKEMVVLAIHTGRIYSIVKVVNDSSAE 945


>XP_016753177.1 PREDICTED: endoribonuclease Dicer homolog 3a-like isoform X3
            [Gossypium hirsutum]
          Length = 1328

 Score =  169 bits (427), Expect = 7e-44
 Identities = 102/289 (35%), Positives = 147/289 (50%), Gaps = 20/289 (6%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISITGTTKRKELHSTTQPTGFCG 630
            LEA KQLHQ+G +DD+L   + E  +   + K  D      GTTKRKELH TT     CG
Sbjct: 657  LEACKQLHQMGALDDHLTPSIEEPSENACVSKGKDSGAG-AGTTKRKELHGTTCIQALCG 715

Query: 629  SWLYSTDYVTLHMYKLSFSGKNNIDLHANLALLVESELEDDVAKTEMDLYLTRGRVVKLQ 450
            SW   +D      YK  F       +++   LL+ES+L DDV  TEMDL+L  G++VK  
Sbjct: 716  SWGEKSDDAVFFAYKFDFKCNIITVVYSGFVLLIESKLADDVGNTEMDLFLI-GKMVKAS 774

Query: 449  FISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREKAKGDIAIIRSIYENNQVENLWIK 270
              SCG++ L   Q+  AK FQE  FNG+FG+L    K+ G     R     ++  +LW  
Sbjct: 775  VSSCGQVHLNAEQMMKAKRFQEFFFNGLFGKLFVGSKSSG---APREFLLRDKSSSLWSP 831

Query: 269  NNMYLLIPLEQGNVYDAQIDWKSIAECAKVAKYFCQ--------------------PAAQ 150
            + MYLL+PLE  +  + +I W  I  C   A++  +                      + 
Sbjct: 832  SRMYLLLPLEDNSTDELRIHWPGITACTLAAEFLNKNSLLGTEQSDDGGSNPSLNSTGSP 891

Query: 149  VESCLESTDLLNLADSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
            V  C E T+++  A+S V  + L    ++ IHTG+IY  +  ++DKTA+
Sbjct: 892  VTDCKE-TNIIRFANSSVDANSLRNTVVLAIHTGRIYCIIEAVSDKTAE 939


>XP_016753176.1 PREDICTED: endoribonuclease Dicer homolog 3-like isoform X2
            [Gossypium hirsutum]
          Length = 1354

 Score =  169 bits (427), Expect = 7e-44
 Identities = 102/289 (35%), Positives = 147/289 (50%), Gaps = 20/289 (6%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISITGTTKRKELHSTTQPTGFCG 630
            LEA KQLHQ+G +DD+L   + E  +   + K  D      GTTKRKELH TT     CG
Sbjct: 354  LEACKQLHQMGALDDHLTPSIEEPSENACVSKGKDSGAG-AGTTKRKELHGTTCIQALCG 412

Query: 629  SWLYSTDYVTLHMYKLSFSGKNNIDLHANLALLVESELEDDVAKTEMDLYLTRGRVVKLQ 450
            SW   +D      YK  F       +++   LL+ES+L DDV  TEMDL+L  G++VK  
Sbjct: 413  SWGEKSDDAVFFAYKFDFKCNIITVVYSGFVLLIESKLADDVGNTEMDLFLI-GKMVKAS 471

Query: 449  FISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREKAKGDIAIIRSIYENNQVENLWIK 270
              SCG++ L   Q+  AK FQE  FNG+FG+L    K+ G     R     ++  +LW  
Sbjct: 472  VSSCGQVHLNAEQMMKAKRFQEFFFNGLFGKLFVGSKSSG---APREFLLRDKSSSLWSP 528

Query: 269  NNMYLLIPLEQGNVYDAQIDWKSIAECAKVAKYFCQ--------------------PAAQ 150
            + MYLL+PLE  +  + +I W  I  C   A++  +                      + 
Sbjct: 529  SRMYLLLPLEDNSTDELRIHWPGITACTLAAEFLNKNSLLGTEQSDDGGSNPSLNSTGSP 588

Query: 149  VESCLESTDLLNLADSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
            V  C E T+++  A+S V  + L    ++ IHTG+IY  +  ++DKTA+
Sbjct: 589  VTDCKE-TNIIRFANSSVDANSLRNTVVLAIHTGRIYCIIEAVSDKTAE 636


>KJB65397.1 hypothetical protein B456_010G093100 [Gossypium raimondii]
          Length = 1516

 Score =  169 bits (427), Expect = 7e-44
 Identities = 103/289 (35%), Positives = 148/289 (51%), Gaps = 20/289 (6%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISITGTTKRKELHSTTQPTGFCG 630
            LEA KQLHQ+G +DD+L   + E  +   I K  D      GTTKRKELH TT     CG
Sbjct: 657  LEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAG-AGTTKRKELHGTTCIQALCG 715

Query: 629  SWLYSTDYVTLHMYKLSFSGKNNIDLHANLALLVESELEDDVAKTEMDLYLTRGRVVKLQ 450
            SW   +D      YK  F       +++   LL+ES+L DDV  TEMDL+L  G++VK  
Sbjct: 716  SWGEKSDDAVFFAYKFDFKCNIITVVYSGFVLLIESKLADDVGNTEMDLFLI-GKMVKAS 774

Query: 449  FISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREKAKGDIAIIRSIYENNQVENLWIK 270
              SCG++ L   Q+  AK FQE  FNG+FG+L    K+ G     R     ++  +LW  
Sbjct: 775  VSSCGQVYLNAEQMVKAKRFQEFFFNGLFGKLFVGSKSSG---APREFLLRDKTSSLWSP 831

Query: 269  NNMYLLIPLEQGNVYDAQIDWKSIAECAKVAKYFCQ--------------------PAAQ 150
            ++MYLL+PLE  +  + +I W  I  C   A++  +                      + 
Sbjct: 832  SHMYLLLPLEDNSTDELRIHWPGITACTLAAEFLNKNSLLGTEQSDDDGSNPSLNSTGSP 891

Query: 149  VESCLESTDLLNLADSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
            V  C E T+++  A+S V  + L    ++ IHTG+IY  +  ++DKTA+
Sbjct: 892  VTYCKE-TNIIRFANSSVDANSLRNTVVLAIHTGRIYCIIEAVSDKTAE 939


>NP_001313825.1 endoribonuclease Dicer homolog 3-like [Gossypium hirsutum] AEC12444.1
            ribonuclease III family protein DCL3 [Gossypium hirsutum]
          Length = 1655

 Score =  169 bits (427), Expect = 7e-44
 Identities = 103/292 (35%), Positives = 147/292 (50%), Gaps = 23/292 (7%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISI---TGTTKRKELHSTTQPTG 639
            LEA KQLHQ+G +DD+L   + E  +   I K  D         GTTKRKELH TT    
Sbjct: 651  LEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAGAGAGAGTTKRKELHGTTCIQA 710

Query: 638  FCGSWLYSTDYVTLHMYKLSFSGKNNIDLHANLALLVESELEDDVAKTEMDLYLTRGRVV 459
             CGSW   +D      YK  F       +++   LL+ES+L DDV  TEMDL+L  G++V
Sbjct: 711  LCGSWGEKSDDAVFFAYKFDFKCNIITVVYSGFVLLIESKLADDVGNTEMDLFLI-GKMV 769

Query: 458  KLQFISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREKAKGDIAIIRSIYENNQVENL 279
            K    SCG++ L   Q+  AK FQE  FNG+FG+L    K+ G     R     ++  +L
Sbjct: 770  KASVSSCGQVRLNAEQMMKAKRFQEFFFNGLFGKLFVGSKSSG---APREFLLRDKTSSL 826

Query: 278  WIKNNMYLLIPLEQGNVYDAQIDWKSIAECAKVAKYFCQ--------------------P 159
            W  + MYLL+PLE  +  + +I W  I  C   A++  +                     
Sbjct: 827  WSPSRMYLLLPLEDNSTDELRIHWPGITACTLAAEFLNKNSLLGTEQSDDGGSNPSLNST 886

Query: 158  AAQVESCLESTDLLNLADSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
             + V  C E T+++  A+S V  + L    ++ IHTG+IY  +  ++DKTA+
Sbjct: 887  GSPVTDCKE-TNIIRFANSSVDANSLRNTVVLAIHTGRIYCIIEAVSDKTAE 937


>XP_016753175.1 PREDICTED: endoribonuclease Dicer homolog 3-like isoform X1
            [Gossypium hirsutum]
          Length = 1657

 Score =  169 bits (427), Expect = 7e-44
 Identities = 102/289 (35%), Positives = 147/289 (50%), Gaps = 20/289 (6%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISITGTTKRKELHSTTQPTGFCG 630
            LEA KQLHQ+G +DD+L   + E  +   + K  D      GTTKRKELH TT     CG
Sbjct: 657  LEACKQLHQMGALDDHLTPSIEEPSENACVSKGKDSGAG-AGTTKRKELHGTTCIQALCG 715

Query: 629  SWLYSTDYVTLHMYKLSFSGKNNIDLHANLALLVESELEDDVAKTEMDLYLTRGRVVKLQ 450
            SW   +D      YK  F       +++   LL+ES+L DDV  TEMDL+L  G++VK  
Sbjct: 716  SWGEKSDDAVFFAYKFDFKCNIITVVYSGFVLLIESKLADDVGNTEMDLFLI-GKMVKAS 774

Query: 449  FISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREKAKGDIAIIRSIYENNQVENLWIK 270
              SCG++ L   Q+  AK FQE  FNG+FG+L    K+ G     R     ++  +LW  
Sbjct: 775  VSSCGQVHLNAEQMMKAKRFQEFFFNGLFGKLFVGSKSSG---APREFLLRDKSSSLWSP 831

Query: 269  NNMYLLIPLEQGNVYDAQIDWKSIAECAKVAKYFCQ--------------------PAAQ 150
            + MYLL+PLE  +  + +I W  I  C   A++  +                      + 
Sbjct: 832  SRMYLLLPLEDNSTDELRIHWPGITACTLAAEFLNKNSLLGTEQSDDGGSNPSLNSTGSP 891

Query: 149  VESCLESTDLLNLADSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
            V  C E T+++  A+S V  + L    ++ IHTG+IY  +  ++DKTA+
Sbjct: 892  VTDCKE-TNIIRFANSSVDANSLRNTVVLAIHTGRIYCIIEAVSDKTAE 939


>KJB65398.1 hypothetical protein B456_010G093100 [Gossypium raimondii]
          Length = 1657

 Score =  169 bits (427), Expect = 7e-44
 Identities = 103/289 (35%), Positives = 148/289 (51%), Gaps = 20/289 (6%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISITGTTKRKELHSTTQPTGFCG 630
            LEA KQLHQ+G +DD+L   + E  +   I K  D      GTTKRKELH TT     CG
Sbjct: 657  LEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAG-AGTTKRKELHGTTCIQALCG 715

Query: 629  SWLYSTDYVTLHMYKLSFSGKNNIDLHANLALLVESELEDDVAKTEMDLYLTRGRVVKLQ 450
            SW   +D      YK  F       +++   LL+ES+L DDV  TEMDL+L  G++VK  
Sbjct: 716  SWGEKSDDAVFFAYKFDFKCNIITVVYSGFVLLIESKLADDVGNTEMDLFLI-GKMVKAS 774

Query: 449  FISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREKAKGDIAIIRSIYENNQVENLWIK 270
              SCG++ L   Q+  AK FQE  FNG+FG+L    K+ G     R     ++  +LW  
Sbjct: 775  VSSCGQVYLNAEQMVKAKRFQEFFFNGLFGKLFVGSKSSG---APREFLLRDKTSSLWSP 831

Query: 269  NNMYLLIPLEQGNVYDAQIDWKSIAECAKVAKYFCQ--------------------PAAQ 150
            ++MYLL+PLE  +  + +I W  I  C   A++  +                      + 
Sbjct: 832  SHMYLLLPLEDNSTDELRIHWPGITACTLAAEFLNKNSLLGTEQSDDDGSNPSLNSTGSP 891

Query: 149  VESCLESTDLLNLADSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
            V  C E T+++  A+S V  + L    ++ IHTG+IY  +  ++DKTA+
Sbjct: 892  VTYCKE-TNIIRFANSSVDANSLRNTVVLAIHTGRIYCIIEAVSDKTAE 939


>XP_012450063.1 PREDICTED: endoribonuclease Dicer homolog 3 isoform X6 [Gossypium
            raimondii]
          Length = 1673

 Score =  169 bits (427), Expect = 7e-44
 Identities = 103/289 (35%), Positives = 148/289 (51%), Gaps = 20/289 (6%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISITGTTKRKELHSTTQPTGFCG 630
            LEA KQLHQ+G +DD+L   + E  +   I K  D      GTTKRKELH TT     CG
Sbjct: 673  LEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAG-AGTTKRKELHGTTCIQALCG 731

Query: 629  SWLYSTDYVTLHMYKLSFSGKNNIDLHANLALLVESELEDDVAKTEMDLYLTRGRVVKLQ 450
            SW   +D      YK  F       +++   LL+ES+L DDV  TEMDL+L  G++VK  
Sbjct: 732  SWGEKSDDAVFFAYKFDFKCNIITVVYSGFVLLIESKLADDVGNTEMDLFLI-GKMVKAS 790

Query: 449  FISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREKAKGDIAIIRSIYENNQVENLWIK 270
              SCG++ L   Q+  AK FQE  FNG+FG+L    K+ G     R     ++  +LW  
Sbjct: 791  VSSCGQVYLNAEQMVKAKRFQEFFFNGLFGKLFVGSKSSG---APREFLLRDKTSSLWSP 847

Query: 269  NNMYLLIPLEQGNVYDAQIDWKSIAECAKVAKYFCQ--------------------PAAQ 150
            ++MYLL+PLE  +  + +I W  I  C   A++  +                      + 
Sbjct: 848  SHMYLLLPLEDNSTDELRIHWPGITACTLAAEFLNKNSLLGTEQSDDDGSNPSLNSTGSP 907

Query: 149  VESCLESTDLLNLADSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
            V  C E T+++  A+S V  + L    ++ IHTG+IY  +  ++DKTA+
Sbjct: 908  VTYCKE-TNIIRFANSSVDANSLRNTVVLAIHTGRIYCIIEAVSDKTAE 955


>XP_012450061.1 PREDICTED: endoribonuclease Dicer homolog 3 isoform X4 [Gossypium
            raimondii]
          Length = 1686

 Score =  169 bits (427), Expect = 7e-44
 Identities = 103/289 (35%), Positives = 148/289 (51%), Gaps = 20/289 (6%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISITGTTKRKELHSTTQPTGFCG 630
            LEA KQLHQ+G +DD+L   + E  +   I K  D      GTTKRKELH TT     CG
Sbjct: 673  LEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAG-AGTTKRKELHGTTCIQALCG 731

Query: 629  SWLYSTDYVTLHMYKLSFSGKNNIDLHANLALLVESELEDDVAKTEMDLYLTRGRVVKLQ 450
            SW   +D      YK  F       +++   LL+ES+L DDV  TEMDL+L  G++VK  
Sbjct: 732  SWGEKSDDAVFFAYKFDFKCNIITVVYSGFVLLIESKLADDVGNTEMDLFLI-GKMVKAS 790

Query: 449  FISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREKAKGDIAIIRSIYENNQVENLWIK 270
              SCG++ L   Q+  AK FQE  FNG+FG+L    K+ G     R     ++  +LW  
Sbjct: 791  VSSCGQVYLNAEQMVKAKRFQEFFFNGLFGKLFVGSKSSG---APREFLLRDKTSSLWSP 847

Query: 269  NNMYLLIPLEQGNVYDAQIDWKSIAECAKVAKYFCQ--------------------PAAQ 150
            ++MYLL+PLE  +  + +I W  I  C   A++  +                      + 
Sbjct: 848  SHMYLLLPLEDNSTDELRIHWPGITACTLAAEFLNKNSLLGTEQSDDDGSNPSLNSTGSP 907

Query: 149  VESCLESTDLLNLADSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
            V  C E T+++  A+S V  + L    ++ IHTG+IY  +  ++DKTA+
Sbjct: 908  VTYCKE-TNIIRFANSSVDANSLRNTVVLAIHTGRIYCIIEAVSDKTAE 955


>KJB65395.1 hypothetical protein B456_010G093100 [Gossypium raimondii]
          Length = 1659

 Score =  168 bits (426), Expect = 9e-44
 Identities = 103/290 (35%), Positives = 148/290 (51%), Gaps = 21/290 (7%)
 Frame = -2

Query: 809  LEAAKQLHQLGVIDDNLHHLLSEYEDVEEIFKSGDKKISI-TGTTKRKELHSTTQPTGFC 633
            LEA KQLHQ+G +DD+L   + E  +   I K  D       GTTKRKELH TT     C
Sbjct: 657  LEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAGAGAGTTKRKELHGTTCIQALC 716

Query: 632  GSWLYSTDYVTLHMYKLSFSGKNNIDLHANLALLVESELEDDVAKTEMDLYLTRGRVVKL 453
            GSW   +D      YK  F       +++   LL+ES+L DDV  TEMDL+L  G++VK 
Sbjct: 717  GSWGEKSDDAVFFAYKFDFKCNIITVVYSGFVLLIESKLADDVGNTEMDLFLI-GKMVKA 775

Query: 452  QFISCGKLSLTPRQIKDAKTFQEISFNGMFGRLIKREKAKGDIAIIRSIYENNQVENLWI 273
               SCG++ L   Q+  AK FQE  FNG+FG+L    K+ G     R     ++  +LW 
Sbjct: 776  SVSSCGQVYLNAEQMVKAKRFQEFFFNGLFGKLFVGSKSSG---APREFLLRDKTSSLWS 832

Query: 272  KNNMYLLIPLEQGNVYDAQIDWKSIAECAKVAKYFCQ--------------------PAA 153
             ++MYLL+PLE  +  + +I W  I  C   A++  +                      +
Sbjct: 833  PSHMYLLLPLEDNSTDELRIHWPGITACTLAAEFLNKNSLLGTEQSDDDGSNPSLNSTGS 892

Query: 152  QVESCLESTDLLNLADSQVRPSDLIGKAIMTIHTGKIYSTVGLLNDKTAQ 3
             V  C E T+++  A+S V  + L    ++ IHTG+IY  +  ++DKTA+
Sbjct: 893  PVTYCKE-TNIIRFANSSVDANSLRNTVVLAIHTGRIYCIIEAVSDKTAE 941