BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00022495
         (1460 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJP06347.1 RDR6 [Pinus tabuliformis]                                  206   4e-54
XP_018678117.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-depe...   178   2e-44
JAT66018.1 RNA-dependent RNA polymerase 6 [Anthurium amnicola]        173   8e-43
XP_010921974.1 PREDICTED: probable RNA-dependent RNA polymerase ...   172   1e-42
XP_010648660.1 PREDICTED: RNA-dependent RNA polymerase 6 [Vitis ...   172   2e-42
XP_009609663.1 PREDICTED: RNA-dependent RNA polymerase 6, partia...   160   3e-42
XP_006483358.1 PREDICTED: RNA-dependent RNA polymerase 6-like is...   171   3e-42
XP_006483356.1 PREDICTED: RNA-dependent RNA polymerase 6-like is...   171   3e-42
XP_016572020.1 PREDICTED: RNA-dependent RNA polymerase 6 [Capsic...   170   8e-42
KDO61726.1 hypothetical protein CISIN_1g041430mg [Citrus sinensis]    169   1e-41
XP_002515520.1 PREDICTED: RNA-dependent RNA polymerase 6 [Ricinu...   167   5e-41
XP_010048973.1 PREDICTED: RNA-dependent RNA polymerase 6 [Eucaly...   167   7e-41
XP_003603409.2 RNA-dependent RNA polymerase family protein [Medi...   167   7e-41
XP_008778879.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-depe...   166   2e-40
XP_010319120.1 PREDICTED: RNA-dependent RNA polymerase 6 isoform...   164   8e-40
NP_001266205.1 RNA-dependent RNA polymerase 6 [Solanum lycopersi...   164   8e-40
AAU21242.1 putative RNA-dependent RNA polymerase SDE1 [Nicotiana...   164   1e-39
XP_018847783.1 PREDICTED: RNA-dependent RNA polymerase 6-like [J...   163   1e-39
XP_008445204.1 PREDICTED: RNA-dependent RNA polymerase 6 [Cucumi...   163   1e-39
XP_012071453.1 PREDICTED: RNA-dependent RNA polymerase 6-like [J...   163   1e-39

>AJP06347.1 RDR6 [Pinus tabuliformis]
          Length = 1189

 Score =  206 bits (524), Expect = 4e-54
 Identities = 119/240 (49%), Positives = 150/240 (62%), Gaps = 4/240 (1%)
 Frame = +1

Query: 751  METIQISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAENQ-- 924
            ME  QIS+G F EGVSA EL  FLE NVG V RCR+K+  TPP +Y  FT S +      
Sbjct: 1    MEPTQISLGGFGEGVSAKELTEFLENNVGVVCRCRLKTSWTPPFTYPNFTNSINDNYNYF 60

Query: 925  VENAG--KVPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRIQRRGVF 1098
            V+N+G  KVPPHAF QF +PS+VK A+ L    +L F G  L+V  G E  SR+ RR   
Sbjct: 61   VKNSGISKVPPHAFVQFAAPSAVKVAVTLSDRGRLIFRGHPLKVKVGAETSSRLHRRRTT 120

Query: 1099 KPSNFTEARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDLQ 1278
             P  F+  ++E GSLL+ +EF VA W        FHVDPFD  CRI   RDQ+F      
Sbjct: 121  PPFRFSPVQLEVGSLLNLNEFSVA-WRAPTSGVDFHVDPFDRRCRIFLVRDQLFG----- 174

Query: 1279 KDAII*CDFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTLL 1458
             D +I CDFK+EF V+D++++R   E+G I++ LQL  PP IYYRTADDD+ V V + LL
Sbjct: 175  NDTLIKCDFKIEFLVRDIRNVRIVHEKGTIVMLLQLWVPPWIYYRTADDDIYVGVPFALL 234


>XP_018678117.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
            SHL2 [Musa acuminata subsp. malaccensis]
          Length = 1199

 Score =  178 bits (451), Expect = 2e-44
 Identities = 99/238 (41%), Positives = 139/238 (58%), Gaps = 2/238 (0%)
 Frame = +1

Query: 751  METIQISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAEN--Q 924
            M   Q+S G F   VSA EL +FLE   G + RCR+K+  TPP SY VF G+  A +  +
Sbjct: 13   MTVSQVSFGGFDAKVSAKELADFLEYEAGIIWRCRVKTSWTPPESYPVFKGTDDAFDVPR 72

Query: 925  VENAGKVPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRIQRRGVFKP 1104
             ++ G+V PHAF  F  P +VK+A+    +  L  NG  LR   G E   R+ RR    P
Sbjct: 73   KDDYGRVVPHAFVHFARPDAVKKAMDAAGKCDLVLNGRPLRANVGTESSFRVNRRRTTDP 132

Query: 1105 SNFTEARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDLQKD 1284
              F+ A VE G+L+S DEFLV+ W        F +DPFD  C+ILF+++  F    L++ 
Sbjct: 133  FRFSNACVEIGNLVSRDEFLVS-WKGPDSAVDFVIDPFDDCCKILFSKETAFYFKGLREM 191

Query: 1285 AII*CDFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTLL 1458
             +I CDFKVEF ++D+  +R +K+    ++  QL+S P +YYRTADDD+   V + LL
Sbjct: 192  TLIMCDFKVEFLLRDINEVRVHKDAAPFVMQFQLISAPYVYYRTADDDIYTSVPFNLL 249


>JAT66018.1 RNA-dependent RNA polymerase 6 [Anthurium amnicola]
          Length = 1199

 Score =  173 bits (438), Expect = 8e-43
 Identities = 95/237 (40%), Positives = 136/237 (57%), Gaps = 1/237 (0%)
 Frame = +1

Query: 751  METIQISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAEN-QV 927
            M   Q+S+G F E VSA EL +FLE  VG + RCR+K+  TPP SY  F  + +++  + 
Sbjct: 13   MVITQVSVGGFDEKVSAKELTDFLESTVGLIWRCRLKTSWTPPESYPDFRLAITSQTLRT 72

Query: 928  ENAGKVPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRIQRRGVFKPS 1107
            +   KV PHAF  F      K A+    + +L  NG  L+V  G +   R+ RR    P 
Sbjct: 73   DEYEKVVPHAFVHFAVSDGAKRALNAAGKSELMLNGHGLKVNSGKDSAFRVNRRRTTDPF 132

Query: 1108 NFTEARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDLQKDA 1287
             F++  VE G+L   DEFLV  W        F +DPFDG C+ILF+RD VF     ++ A
Sbjct: 133  KFSDVHVEIGTLFRRDEFLVG-WEGPNSGVDFVIDPFDGCCKILFSRDVVFSFKGRKETA 191

Query: 1288 II*CDFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTLL 1458
            ++ CDFKVEF V+D+  ++ + ++   ++   L S PS++YRTADDD+ V V + LL
Sbjct: 192  VLKCDFKVEFLVRDINEIKLFTDQSPFVMLFHLPSSPSVHYRTADDDIYVSVPFNLL 248


>XP_010921974.1 PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis
            guineensis] XP_019706451.1 PREDICTED: probable
            RNA-dependent RNA polymerase SHL2 [Elaeis guineensis]
            XP_019706452.1 PREDICTED: probable RNA-dependent RNA
            polymerase SHL2 [Elaeis guineensis]
          Length = 1198

 Score =  172 bits (437), Expect = 1e-42
 Identities = 98/233 (42%), Positives = 137/233 (58%), Gaps = 1/233 (0%)
 Frame = +1

Query: 763  QISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAEN-QVENAG 939
            Q+S G F E VSA +L +F+E   G + RCR+K+  TPP SY  F     ++  + ++  
Sbjct: 18   QVSFGGFDERVSAKDLTDFMEHEAGLIWRCRVKNSWTPPESYPNFNVLDVSDVLRKDDHP 77

Query: 940  KVPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRIQRRGVFKPSNFTE 1119
            KV PHAF  F +P + K AI    + +L  NG  LR   G +   RI RR    P  F +
Sbjct: 78   KVVPHAFVHFATPDAAKRAINAAGKCELILNGHPLRANSGIDSSFRINRRRTTDPFRFVD 137

Query: 1120 ARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDLQKDAII*C 1299
              VE G+L S DEFLVA    K  V F  +DPFDG CRILF+++  F   D+++ A+I C
Sbjct: 138  VGVEIGTLASRDEFLVAWKGPKLGVDFL-IDPFDGCCRILFSKETAFAFKDIKEMAVIKC 196

Query: 1300 DFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTLL 1458
            DFKVEF V+D+  ++ + +R   ++  QL S P +YYRTADDD+ V   ++LL
Sbjct: 197  DFKVEFLVRDINEVKLFTDRYPHVMLFQLSSTPWVYYRTADDDIHVTASFSLL 249


>XP_010648660.1 PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  172 bits (435), Expect = 2e-42
 Identities = 99/238 (41%), Positives = 140/238 (58%), Gaps = 2/238 (0%)
 Frame = +1

Query: 751  METIQISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAE-NQV 927
            M   QISIG F + V+A+EL  +LE+ +G+V RCR+K+  TPP SY  F    +A+  + 
Sbjct: 10   MVVTQISIGGFDQYVTATELTYYLEDTIGSVDRCRLKTSSTPPESYPDFEIIDTAKIERT 69

Query: 928  ENAGKVPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRI-QRRGVFKP 1104
            E+  KV PHAF  F+SP +   A+    + +L  +G  L+V  G E    + QRR    P
Sbjct: 70   EDYKKVEPHAFVHFVSPEAATWALDAAGKSELFLHGKPLKVSLGPETPFHLNQRRRTTFP 129

Query: 1105 SNFTEARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDLQKD 1284
              F + R+E G L+S DE+  A W        F VDPFDG C+ LFT+D  F    + K 
Sbjct: 130  FKFPDVRLEIGILVSRDEYF-AGWRGPSSGVDFLVDPFDGTCKFLFTKDTAFSFKGMPKH 188

Query: 1285 AII*CDFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTLL 1458
            A+I C+FKVEF V+++  +R  ++   +IL LQL S P +YYRTADDD++  V + LL
Sbjct: 189  AVIKCNFKVEFLVREINEVRQRRDMSSLILLLQLSSSPFVYYRTADDDIEETVPFDLL 246


>XP_009609663.1 PREDICTED: RNA-dependent RNA polymerase 6, partial [Nicotiana
            tomentosiformis]
          Length = 259

 Score =  160 bits (405), Expect = 3e-42
 Identities = 92/233 (39%), Positives = 128/233 (54%), Gaps = 1/233 (0%)
 Frame = +1

Query: 763  QISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAENQVENAGK 942
            QIS+G F   V+A  L  +LEE VG V RCR+K   TPP SY  +        ++ N  K
Sbjct: 14   QISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTYDIDAEKVQRMNNYEK 73

Query: 943  VPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRI-QRRGVFKPSNFTE 1119
            V PHAF  F S  S K A+      +L      L V  G E   R+ QRR    P  F++
Sbjct: 74   VVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLNQRRRTTMPFKFSD 133

Query: 1120 ARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDLQKDAII*C 1299
              VE G L+S D+F+V  W   +    F VDPF+G C+ILFT+D  F      + AII C
Sbjct: 134  VSVEMGVLVSKDDFVVG-WRGPRTGVDFLVDPFNGTCKILFTKDTAFSFRGEARHAIIKC 192

Query: 1300 DFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTLL 1458
            +FK+EF V+++  ++  K+   +++  QL S P ++YRTADDD++  V + LL
Sbjct: 193  NFKIEFLVREINEIKKCKDFTSLVILFQLASSPLVFYRTADDDIEESVAFDLL 245


>XP_006483358.1 PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
            sinensis]
          Length = 1025

 Score =  171 bits (433), Expect = 3e-42
 Identities = 98/241 (40%), Positives = 137/241 (56%), Gaps = 2/241 (0%)
 Frame = +1

Query: 742  ELLMETIQISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAE- 918
            E L+   Q+S G F   V A+ELV +LE  VG V RCR+K+  TP  SY  F+ + +AE 
Sbjct: 7    EKLLVDAQVSFGGFDRNVKAAELVKYLENEVGGVWRCRLKTSCTPSESYPDFSVTNTAEV 66

Query: 919  NQVENAGKVPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRIQRRG-V 1095
             + ++  KV PHAF  F  P+ V  A+      +L  NG  L+V  G E   R+ +RG  
Sbjct: 67   RKTDDYEKVEPHAFVHFAMPTYVTRAVDAAGRTELFLNGQALKVSLGPENPFRLNQRGRT 126

Query: 1096 FKPSNFTEARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDL 1275
              P    +  VE G+L+S DEF VA W      + F VDPFDG C+  FTRD  F +   
Sbjct: 127  STPFKLPDVCVEIGTLVSRDEFFVA-WRGPASGTDFLVDPFDGTCKFCFTRDIAFALKSS 185

Query: 1276 QKDAII*CDFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTL 1455
             + A+I C+FKVEF V+++  ++ Y E   + + LQL S P ++YRTADDD+ V V + +
Sbjct: 186  TEHAVIKCEFKVEFLVREINLVKQYSEFSCVAILLQLASSPRVWYRTADDDILVLVPFDM 245

Query: 1456 L 1458
            L
Sbjct: 246  L 246


>XP_006483356.1 PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
            sinensis] XP_006483357.1 PREDICTED: RNA-dependent RNA
            polymerase 6-like isoform X1 [Citrus sinensis]
          Length = 1197

 Score =  171 bits (433), Expect = 3e-42
 Identities = 98/241 (40%), Positives = 137/241 (56%), Gaps = 2/241 (0%)
 Frame = +1

Query: 742  ELLMETIQISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAE- 918
            E L+   Q+S G F   V A+ELV +LE  VG V RCR+K+  TP  SY  F+ + +AE 
Sbjct: 7    EKLLVDAQVSFGGFDRNVKAAELVKYLENEVGGVWRCRLKTSCTPSESYPDFSVTNTAEV 66

Query: 919  NQVENAGKVPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRIQRRG-V 1095
             + ++  KV PHAF  F  P+ V  A+      +L  NG  L+V  G E   R+ +RG  
Sbjct: 67   RKTDDYEKVEPHAFVHFAMPTYVTRAVDAAGRTELFLNGQALKVSLGPENPFRLNQRGRT 126

Query: 1096 FKPSNFTEARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDL 1275
              P    +  VE G+L+S DEF VA W      + F VDPFDG C+  FTRD  F +   
Sbjct: 127  STPFKLPDVCVEIGTLVSRDEFFVA-WRGPASGTDFLVDPFDGTCKFCFTRDIAFALKSS 185

Query: 1276 QKDAII*CDFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTL 1455
             + A+I C+FKVEF V+++  ++ Y E   + + LQL S P ++YRTADDD+ V V + +
Sbjct: 186  TEHAVIKCEFKVEFLVREINLVKQYSEFSCVAILLQLASSPRVWYRTADDDILVLVPFDM 245

Query: 1456 L 1458
            L
Sbjct: 246  L 246


>XP_016572020.1 PREDICTED: RNA-dependent RNA polymerase 6 [Capsicum annuum]
          Length = 1196

 Score =  170 bits (430), Expect = 8e-42
 Identities = 94/240 (39%), Positives = 138/240 (57%), Gaps = 1/240 (0%)
 Frame = +1

Query: 742  ELLMETIQISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAEN 921
            E+ +   QIS+G F   V+A +L  +LEE VG V RCR+K+  TPP SY V+        
Sbjct: 7    EMTLVVTQISVGGFDNNVNAKKLSEYLEEQVGQVWRCRLKTSSTPPESYPVYDIDAEKVR 66

Query: 922  QVENAGKVPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRI-QRRGVF 1098
            ++ N  KV PHAF  F S  S K A+     ++L      L+V  G E   ++ QRR   
Sbjct: 67   RMNNYEKVEPHAFVHFASSGSAKNALAAARRDELLLE-KPLKVSLGPENFHKMNQRRSDT 125

Query: 1099 KPSNFTEARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDLQ 1278
             P  F++  VE G+L+S D+F+V  W        F VDPFDG C+ILFT+D VF      
Sbjct: 126  LPYKFSDVNVEIGALVSSDDFVVG-WRGPHTGVNFLVDPFDGTCKILFTKDTVFGFKGEG 184

Query: 1279 KDAII*CDFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTLL 1458
            + A+I C+FK+EF ++++  ++ YK+   +++ L L S P ++YRTADDD++  V + LL
Sbjct: 185  RHAVIKCNFKIEFLLREINEIKEYKDFSSLVILLHLASAPLVFYRTADDDIEESVAFDLL 244


>KDO61726.1 hypothetical protein CISIN_1g041430mg [Citrus sinensis]
          Length = 1197

 Score =  169 bits (429), Expect = 1e-41
 Identities = 98/241 (40%), Positives = 136/241 (56%), Gaps = 2/241 (0%)
 Frame = +1

Query: 742  ELLMETIQISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAE- 918
            E L+   Q+S G F   V A+ELV +LE  VG V RCR+K+  TP  SY  F  + +AE 
Sbjct: 7    EKLLVDAQVSFGGFDRNVKAAELVKYLENEVGGVWRCRLKTSCTPSESYPDFYVTNTAEV 66

Query: 919  NQVENAGKVPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRIQRRG-V 1095
             + ++  KV PHAF  F  P+ V  A+      +L  NG  L+V  G E   R+ +RG  
Sbjct: 67   RKTDDYEKVEPHAFVHFAMPTYVTRAVDAAGRTELFLNGRALKVSLGPENPFRLNQRGRT 126

Query: 1096 FKPSNFTEARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDL 1275
              P    +  VE G+L+S DEF VA W      + F VDPFDG C+  FTRD  F +   
Sbjct: 127  STPFKLPDVCVEIGTLVSRDEFFVA-WRGPASGTDFLVDPFDGTCKFCFTRDIAFALKSS 185

Query: 1276 QKDAII*CDFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTL 1455
             + A+I C+FKVEF V+++  ++ Y E   + + LQL S P ++YRTADDD+ V V + +
Sbjct: 186  TEHAVIKCEFKVEFLVREINLVKQYSEFSCVAILLQLASSPRVWYRTADDDILVLVPFDM 245

Query: 1456 L 1458
            L
Sbjct: 246  L 246


>XP_002515520.1 PREDICTED: RNA-dependent RNA polymerase 6 [Ricinus communis]
            EEF46969.1 RNA-dependent RNA polymerase, putative
            [Ricinus communis]
          Length = 1203

 Score =  167 bits (424), Expect = 5e-41
 Identities = 97/234 (41%), Positives = 135/234 (57%), Gaps = 2/234 (0%)
 Frame = +1

Query: 763  QISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAENQ-VENAG 939
            Q+S G F + V+A +LV +L+  +G V RCR+K+  TPP SY  F  + +A  Q V+   
Sbjct: 14   QVSFGGFDKDVTARDLVAYLDNEIGQVWRCRLKTSWTPPESYPNFEITDTAVIQRVDAYR 73

Query: 940  KVPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRI-QRRGVFKPSNFT 1116
            +V PHAF  F SP S   A       +L FNG  ++V  G E    + QRR    P   +
Sbjct: 74   RVEPHAFVHFASPDSATWAKNAAGHCELFFNGRPVKVSLGPENPFHLNQRRRTTIPFKLS 133

Query: 1117 EARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDLQKDAII* 1296
            +  VE G+L+S DEFLV  W        F VDPFDG C+  FTRD  F      + A+I 
Sbjct: 134  DVHVEIGTLVSRDEFLVG-WRGPPSGVDFLVDPFDGKCKFCFTRDTAFSFKGTTEHAVIR 192

Query: 1297 CDFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTLL 1458
            CDFK+EF V+D+  ++ Y +   +++ LQL S PS++YRTADDD++V V + LL
Sbjct: 193  CDFKLEFLVRDINEIKQYTDTSCLVILLQLASAPSVWYRTADDDIEVLVPFDLL 246


>XP_010048973.1 PREDICTED: RNA-dependent RNA polymerase 6 [Eucalyptus grandis]
            KCW81403.1 hypothetical protein EUGRSUZ_C02780
            [Eucalyptus grandis]
          Length = 1195

 Score =  167 bits (423), Expect = 7e-41
 Identities = 99/234 (42%), Positives = 130/234 (55%), Gaps = 2/234 (0%)
 Frame = +1

Query: 763  QISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAENQ-VENAG 939
            QI +G F   V+A ELV +LE+ VG + RCR+K+  TPP SY  F  +     Q V+   
Sbjct: 14   QIGVGGFDPNVTAKELVEYLEDTVGLIWRCRLKTSWTPPESYPDFEVTSFDTIQIVDEYR 73

Query: 940  KVPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRI-QRRGVFKPSNFT 1116
            KV PHAF  F  P +   A +L     L  N   L+V  G E    + QRR    P    
Sbjct: 74   KVEPHAFVHFALPEAASSAYELSQNNGLFLNNKPLKVNLGPENPFHMNQRRRTTTPYKLP 133

Query: 1117 EARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDLQKDAII* 1296
            E  +E G+L++ +EFLVA W        F VDPFD  CR  FTR   F   DL   A+I 
Sbjct: 134  EVCLEIGTLITPEEFLVA-WRGPSSGVDFFVDPFDSKCRFCFTRKTAFSFKDLSFYAVIN 192

Query: 1297 CDFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTLL 1458
            CDFK+EF V+D+  ++ Y+E   I++ LQL SPP + YRTADD+V+V V + LL
Sbjct: 193  CDFKMEFLVRDINEIKQYREMSSIVVLLQLASPPHVSYRTADDNVEVSVPFDLL 246


>XP_003603409.2 RNA-dependent RNA polymerase family protein [Medicago truncatula]
            AES73660.2 RNA-dependent RNA polymerase family protein
            [Medicago truncatula]
          Length = 1203

 Score =  167 bits (423), Expect = 7e-41
 Identities = 95/239 (39%), Positives = 138/239 (57%), Gaps = 2/239 (0%)
 Frame = +1

Query: 748  LMETIQISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAENQV 927
            ++ T Q+SIG F   V AS+LV++LE  +G V RCR+K+  TPP SY  FT + + + ++
Sbjct: 11   VLTTTQVSIGGFDSDVKASDLVSYLESKIGYVDRCRLKTSCTPPESYPEFTMTDTKQIEI 70

Query: 928  -ENAGKVPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRI-QRRGVFK 1101
             ++  KV PHAF  F  P S  EA+       L  NG VL+V  G +  + + QRR    
Sbjct: 71   TDDYKKVAPHAFVHFTLPDSATEALNAAGRCDLILNGKVLKVISGPQNPNFLNQRRRTEA 130

Query: 1102 PSNFTEARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDLQK 1281
            P   ++  VE G+L+S  +F VA W        F VDPFD  C+I F RD  F    + K
Sbjct: 131  PFKMSDVIVEIGTLVSPADFTVA-WRGCDKGVNFLVDPFDKICKICFNRDTAFSFKGIGK 189

Query: 1282 DAII*CDFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTLL 1458
             A+I CDFKV F ++D++ ++ Y +   +++ L+L S P ++YRTADDD+D  V   LL
Sbjct: 190  QAVIKCDFKVGFLIRDIEEIQRYDDTSHLVVLLRLASSPLVWYRTADDDIDESVTIDLL 248


>XP_008778879.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
            SHL2 [Phoenix dactylifera]
          Length = 1198

 Score =  166 bits (420), Expect = 2e-40
 Identities = 93/233 (39%), Positives = 134/233 (57%), Gaps = 1/233 (0%)
 Frame = +1

Query: 763  QISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAE-NQVENAG 939
            Q+S G F E VSA +L +FLE   G + RCR+K+  TPP SY  +     ++  + ++  
Sbjct: 18   QVSFGGFDERVSAKDLTDFLEHEAGLIWRCRVKNSWTPPESYPDYDVLDVSDVRRKDDYP 77

Query: 940  KVPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRIQRRGVFKPSNFTE 1119
            KV PHAF  F +  + K AI    + +L   G  LR   G +   RI RR    P  FT+
Sbjct: 78   KVVPHAFVHFATLDAAKRAINAAGKCELVLQGCPLRANSGTDSSFRISRRRTMDPFRFTD 137

Query: 1120 ARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDLQKDAII*C 1299
              VE G+L S DEFLVA W   +    F +DPFDG CRILF+++  F   D+++ A++ C
Sbjct: 138  VGVEIGTLASRDEFLVA-WKGPKSGVDFLIDPFDGRCRILFSKETAFAFKDIKEMAVLKC 196

Query: 1300 DFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTLL 1458
            DFKVEF  +D+  ++ + ++    +  QL S P +YYRTADDD+ V   ++LL
Sbjct: 197  DFKVEFLARDINEVKLFTDQYPPAMLFQLASTPWVYYRTADDDILVTAPFSLL 249


>XP_010319120.1 PREDICTED: RNA-dependent RNA polymerase 6 isoform X1 [Solanum
            lycopersicum] XP_010319121.1 PREDICTED: RNA-dependent RNA
            polymerase 6 isoform X1 [Solanum lycopersicum]
          Length = 1197

 Score =  164 bits (415), Expect = 8e-40
 Identities = 92/233 (39%), Positives = 131/233 (56%), Gaps = 1/233 (0%)
 Frame = +1

Query: 763  QISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAENQVENAGK 942
            QIS+G F   V+A  L  +LEE VG V RCR+K+  TPP SY  +        ++ N  K
Sbjct: 14   QISVGGFSNDVNAKMLSEYLEEQVGQVWRCRLKTSSTPPDSYPTYDIDVEKVRRMNNYIK 73

Query: 943  VPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRI-QRRGVFKPSNFTE 1119
            V PHAF  F S  S + A+     ++L      L+V  G E    + +RR  F P  F++
Sbjct: 74   VEPHAFVHFASSESAQNALAAARRDELFLEEKPLKVSLGPENTFNMNERRRTFMPYKFSD 133

Query: 1120 ARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDLQKDAII*C 1299
              VE G L+S+D+F+V  W        F VDPF+G C+ILFTRD  F      K A+I C
Sbjct: 134  VGVEIGVLVSNDDFVVG-WRGPHSGVNFLVDPFNGKCKILFTRDTAFCFKGEGKHAVIKC 192

Query: 1300 DFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTLL 1458
            +FK+EF ++++  +   K+   ++L LQL S P ++YRTADDD++  V + LL
Sbjct: 193  NFKIEFLLREINEINECKDFSSLVLLLQLASSPLVFYRTADDDIEESVAFDLL 245


>NP_001266205.1 RNA-dependent RNA polymerase 6 [Solanum lycopersicum] AFO53516.1
            RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
          Length = 1197

 Score =  164 bits (415), Expect = 8e-40
 Identities = 92/233 (39%), Positives = 131/233 (56%), Gaps = 1/233 (0%)
 Frame = +1

Query: 763  QISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAENQVENAGK 942
            QIS+G F   V+A  L  +LEE VG V RCR+K+  TPP SY  +        ++ N  K
Sbjct: 14   QISVGGFSNDVNAKMLSEYLEEQVGQVWRCRLKTSSTPPDSYPTYDIDVEKVRRMNNYIK 73

Query: 943  VPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRI-QRRGVFKPSNFTE 1119
            V PHAF  F S  S + A+     ++L      L+V  G E    + +RR  F P  F++
Sbjct: 74   VEPHAFVHFASSESAQNALAAARRDELFLEEKPLKVSLGPENTFNMNERRRTFMPYKFSD 133

Query: 1120 ARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDLQKDAII*C 1299
              VE G L+S+D+F+V  W        F VDPF+G C+ILFTRD  F      K A+I C
Sbjct: 134  VGVEIGVLVSNDDFVVG-WRGPHSGVNFLVDPFNGKCKILFTRDTAFCFKGEGKHAVIKC 192

Query: 1300 DFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTLL 1458
            +FK+EF ++++  +   K+   ++L LQL S P ++YRTADDD++  V + LL
Sbjct: 193  NFKIEFLLREINEINECKDFSSLVLLLQLASSPLVFYRTADDDIEESVAFDLL 245


>AAU21242.1 putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  164 bits (414), Expect = 1e-39
 Identities = 93/233 (39%), Positives = 132/233 (56%), Gaps = 1/233 (0%)
 Frame = +1

Query: 763  QISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAENQVENAGK 942
            QIS+G F   V+A  L  +LEE VG V RCR+K   TPP SY  +    +  +++++  K
Sbjct: 14   QISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDVDAARVHRMKDYEK 73

Query: 943  VPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRI-QRRGVFKPSNFTE 1119
            V PHAF  F S  S K A+       L      L V  G E   R+ QRR    P  F++
Sbjct: 74   VVPHAFVHFASSESAKYALAAAGGNGLILGKKPLIVSLGPENPYRLNQRRRTTMPFKFSD 133

Query: 1120 ARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDLQKDAII*C 1299
              VE G L+S D+F+V  W   +    F VDPF+G C+ILFT+D  F      K AII C
Sbjct: 134  VSVEMGVLVSKDDFVVG-WRGPRTGVDFFVDPFNGACKILFTKDTAFSFRGEAKHAIIKC 192

Query: 1300 DFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTLL 1458
            +FK+EF V+++  ++ +K+   +++ LQL S P ++YRTADDD++  V + LL
Sbjct: 193  NFKIEFMVREINEIKKFKDFTSLVILLQLASSPLVFYRTADDDIEESVAFDLL 245


>XP_018847783.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Juglans regia]
            XP_018847785.1 PREDICTED: RNA-dependent RNA polymerase
            6-like [Juglans regia] XP_018847786.1 PREDICTED:
            RNA-dependent RNA polymerase 6-like [Juglans regia]
            XP_018847787.1 PREDICTED: RNA-dependent RNA polymerase
            6-like [Juglans regia] XP_018847788.1 PREDICTED:
            RNA-dependent RNA polymerase 6-like [Juglans regia]
          Length = 931

 Score =  163 bits (413), Expect = 1e-39
 Identities = 96/234 (41%), Positives = 131/234 (55%), Gaps = 2/234 (0%)
 Frame = +1

Query: 763  QISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAENQVENA-G 939
            Q+S G F   V A++LV  LE  VG V RCR+K+  TPP SY  F    +++ ++E+   
Sbjct: 16   QVSFGGFDSNVRATDLVECLEYEVGTVFRCRLKTSWTPPESYPKFEVIDTSDIEIEDDYK 75

Query: 940  KVPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRI-QRRGVFKPSNFT 1116
            KV PHAF  F +P SV  A+       L  N   L+V  G +    + QRR    P   +
Sbjct: 76   KVEPHAFVHFATPKSVDWALDAAGRCDLFLNKQQLKVSLGFQSPFHLRQRRRTTTPHKLS 135

Query: 1117 EARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDLQKDAII* 1296
            +  VE G+L+S DEF VA W        F VDPFDG C+  FTRD VF      K A+I 
Sbjct: 136  DVLVEVGTLVSRDEFFVA-WRGAPYGVDFLVDPFDGTCKFCFTRDTVFSFKSTSKYAVIK 194

Query: 1297 CDFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTLL 1458
            C+FK+EF V+D+  ++ Y +   +++ L L S P I+YRTADDD++  V Y LL
Sbjct: 195  CNFKMEFVVRDISEIKRYNDTSYLVILLHLASSPCIWYRTADDDIEESVPYDLL 248


>XP_008445204.1 PREDICTED: RNA-dependent RNA polymerase 6 [Cucumis melo]
            XP_016900057.1 PREDICTED: RNA-dependent RNA polymerase 6
            [Cucumis melo]
          Length = 1197

 Score =  163 bits (413), Expect = 1e-39
 Identities = 94/234 (40%), Positives = 130/234 (55%), Gaps = 2/234 (0%)
 Frame = +1

Query: 763  QISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAEN-QVENAG 939
            Q+S G F   V A +L+++LE  +G V RCR+K+  TPP SY  F  S  A   + ++  
Sbjct: 13   QVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVSNVANVIKSDDYK 72

Query: 940  KVPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRI-QRRGVFKPSNFT 1116
            KV PHAF  F+SP S  EA+      +L FNG +L+   G E    I QRR    P   +
Sbjct: 73   KVVPHAFVHFVSPDSAAEALHAAGRGELLFNGKLLKASLGPESPFHINQRRRTKVPFKLS 132

Query: 1117 EARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDLQKDAII* 1296
            + +V+ G+L   D F VA W        F VDPFDG C+  FT+D  F   D  K  ++ 
Sbjct: 133  DVQVDIGNLTCHDGFSVA-WRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDNNKYTVLK 191

Query: 1297 CDFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTLL 1458
            CD+K+EF V+D+  ++ Y +    ++ LQL S P I+YRTADDD+   V Y LL
Sbjct: 192  CDYKLEFIVRDINQIKRYTDTSCYVILLQLTSSPCIWYRTADDDIAKSVPYDLL 245


>XP_012071453.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
            KDP38635.1 hypothetical protein JCGZ_03988 [Jatropha
            curcas]
          Length = 1198

 Score =  163 bits (413), Expect = 1e-39
 Identities = 98/234 (41%), Positives = 131/234 (55%), Gaps = 2/234 (0%)
 Frame = +1

Query: 763  QISIGRFREGVSASELVNFLEENVGNVARCRIKSRITPPCSYLVFTGSRSAENQVENAGK 942
            Q+S G F   V+A +LV +LEE +G V RCR+K+  TPP SY  F  + +A     N  K
Sbjct: 14   QVSFGGFENHVNAKDLVAYLEEVIGQVWRCRLKTSWTPPESYPNFKITDTAGIHRTNEYK 73

Query: 943  -VPPHAFAQFMSPSSVKEAIKLI*EEKLCFNGSVLRVWEGHERDSRI-QRRGVFKPSNFT 1116
             V PHAF  F    S   A       +L  N   L+V  G E    + QRR    PS  +
Sbjct: 74   RVEPHAFVHFALAESATWAKNAAGRCELFLNDRPLKVSLGPENPFTLNQRRRKTIPSKLS 133

Query: 1117 EARVEGGSLLSDDEFLVAAWMNKQDVSFFHVDPFDGNCRILFTRDQVFRISDLQKDAII* 1296
            +  +E G ++S DEFLV  W        F VDPFDG C+  FTRD  F I D  K A+I 
Sbjct: 134  DVCIEIGMMVSRDEFLVG-WRGPPSGVDFLVDPFDGTCKFCFTRDTAFSIKDTNKHAVIR 192

Query: 1297 CDFKVEFQVKDLKSLRTYKERGMIILFLQLLSPPSIYYRTADDDVDVKVRYTLL 1458
            CDFK+EF V+D+  ++ YK+   +++ LQL S P ++YRTADDD++V V + LL
Sbjct: 193  CDFKLEFLVRDINEIKQYKDTSYLVILLQLASAPWVWYRTADDDIEVLVPFNLL 246