BLASTX nr result

ID: Ephedra29_contig00022432 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00022432
         (368 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_002979100.1 hypothetical protein SELMODRAFT_153081 [Selaginel...    39   2e-06

>XP_002979100.1 hypothetical protein SELMODRAFT_153081 [Selaginella moellendorffii]
           EFJ20057.1 hypothetical protein SELMODRAFT_153081
           [Selaginella moellendorffii]
          Length = 397

 Score = 39.3 bits (90), Expect(3) = 2e-06
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +3

Query: 180 QVLCKLGTIKAHAKFQVELYTLSKEE 257
           QV+CK GTIK + KF+ E+Y LSK+E
Sbjct: 293 QVICKPGTIKTYKKFEAEIYVLSKDE 318



 Score = 32.7 bits (73), Expect(3) = 2e-06
 Identities = 18/25 (72%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
 Frame = +1

Query: 40  GEAGD*VGLLLRELKRE-VSCGQVL 111
           G+AGD VGLLLR LKRE +S GQV+
Sbjct: 271 GQAGDNVGLLLRGLKREDISRGQVI 295



 Score = 26.2 bits (56), Expect(3) = 2e-06
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +2

Query: 2   VTGVEMFKEILDR 40
           VTGVEMFK+ILD+
Sbjct: 258 VTGVEMFKKILDQ 270


Top