BLASTX nr result
ID: Ephedra29_contig00022266
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00022266
(719 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AIU48200.1 MSH1, partial [Ginkgo biloba] 141 2e-35
OMP03154.1 GIY-YIG nuclease superfamily [Corchorus capsularis] 130 6e-31
XP_012487343.1 PREDICTED: DNA mismatch repair protein MSH1, mito... 129 2e-30
XP_016732353.1 PREDICTED: DNA mismatch repair protein MSH1, mito... 127 5e-30
OMO95321.1 GIY-YIG nuclease superfamily [Corchorus olitorius] 127 5e-30
KHG14948.1 DNA mismatch repair mutS [Gossypium arboreum] 125 3e-29
XP_017607923.1 PREDICTED: DNA mismatch repair protein MSH1, mito... 125 3e-29
XP_002964744.1 hypothetical protein SELMODRAFT_230470 [Selaginel... 124 1e-28
EOY06224.1 MUTL protein isoform 2 [Theobroma cacao] 123 2e-28
XP_017975472.1 PREDICTED: DNA mismatch repair protein MSH1, mito... 123 2e-28
XP_007035297.2 PREDICTED: DNA mismatch repair protein MSH1, mito... 123 2e-28
EOY06223.1 MUTL protein isoform 1 [Theobroma cacao] 123 2e-28
XP_017975471.1 PREDICTED: DNA mismatch repair protein MSH1, mito... 123 2e-28
XP_019705613.1 PREDICTED: DNA mismatch repair protein MSH1, mito... 122 5e-28
XP_002962164.1 hypothetical protein SELMODRAFT_77583 [Selaginell... 122 5e-28
XP_010918844.1 PREDICTED: DNA mismatch repair protein MSH1, mito... 122 5e-28
AIU48198.1 MSH1, partial [Cinnamomum camphora] 120 7e-28
XP_018686523.1 PREDICTED: DNA mismatch repair protein MSH1, mito... 121 9e-28
XP_009411377.1 PREDICTED: DNA mismatch repair protein MSH1, mito... 121 9e-28
AIU48178.1 MSH1, partial [Aristolochia tagala] 120 1e-27
>AIU48200.1 MSH1, partial [Ginkgo biloba]
Length = 537
Score = 141 bits (356), Expect = 2e-35
Identities = 74/118 (62%), Positives = 91/118 (77%), Gaps = 4/118 (3%)
Frame = +1
Query: 1 RLLDVIGTK----NCPSPVLSYSYVRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLA 168
+LL++ G K N PS + S + ARE+PPP N SCVYILQRPDGK+YVG+TDDLA
Sbjct: 424 KLLELHGQKLLLPNPPS--ICCSLIGARERPPPTSINSSCVYILQRPDGKFYVGQTDDLA 481
Query: 169 GRIGAHRSIEGLKKVPFLYAKVPGKSVAREIETFIINRLLHSGFELVNKTDQSHQNFG 342
GRI AHR++EGL+ FLY +VPGKSVARE+ET +IN+L SGFELVNK DQ+H +FG
Sbjct: 482 GRISAHRTVEGLQ---FLYIRVPGKSVARELETLLINQLPLSGFELVNKADQNHHSFG 536
>OMP03154.1 GIY-YIG nuclease superfamily [Corchorus capsularis]
Length = 1136
Score = 130 bits (327), Expect = 6e-31
Identities = 62/120 (51%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Frame = +1
Query: 1 RLLDVIGTKNCPS-PVLSYSYVRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGRI 177
+L+++ +N PVL++ + AREQPPP+ SCVY++ RPD K Y+GETDDL GR+
Sbjct: 1010 KLMELYKQRNTSELPVLNFVAIAAREQPPPSTIGASCVYVMFRPDKKLYIGETDDLDGRV 1069
Query: 178 GAHRSIEGLKKVPFLYAKVPGKSVAREIETFIINRLLHSGFELVNKTDQSHQNFGVKYLT 357
AHRS +G++ FLY VPGKS+AR++ET IIN+LL GF L N D HQNFG L+
Sbjct: 1070 RAHRSKDGMQNASFLYFIVPGKSIARQLETLIINQLLSQGFSLTNLADGKHQNFGTSNLS 1129
>XP_012487343.1 PREDICTED: DNA mismatch repair protein MSH1, mitochondrial [Gossypium
raimondii] KJB38436.1 hypothetical protein
B456_006G254800 [Gossypium raimondii]
Length = 1126
Score = 129 bits (323), Expect = 2e-30
Identities = 61/124 (49%), Positives = 84/124 (67%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 RLLDVIGTKNCPS-PVLSYSYVRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGRI 177
+L+++ KN PV + + AREQPPP++ SCVY++ RPD K Y+GETDDL GRI
Sbjct: 1000 KLMELYKLKNTSDVPVFNCVAIAAREQPPPSIIGASCVYVMFRPDKKLYIGETDDLDGRI 1059
Query: 178 GAHRSIEGLKKVPFLYAKVPGKSVAREIETFIINRLLHSGFELVNKTDQSHQNFGVKYLT 357
+HRS +G++ FLY VPGKS+AR++ET +IN+LL GF + N D HQNFG L+
Sbjct: 1060 RSHRSKDGMENASFLYFTVPGKSIARQLETLLINQLLSQGFPIANLADGKHQNFGTSSLS 1119
Query: 358 KDAM 369
D +
Sbjct: 1120 FDGI 1123
>XP_016732353.1 PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
[Gossypium hirsutum]
Length = 1126
Score = 127 bits (320), Expect = 5e-30
Identities = 61/124 (49%), Positives = 83/124 (66%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 RLLDVIGTKNCPS-PVLSYSYVRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGRI 177
+L+++ KN PV + + AREQPPP+ SCVY++ RPD K Y+GETDDL GRI
Sbjct: 1000 KLMELYKLKNTSDVPVFNCVAIAAREQPPPSTIGASCVYVMFRPDKKLYIGETDDLDGRI 1059
Query: 178 GAHRSIEGLKKVPFLYAKVPGKSVAREIETFIINRLLHSGFELVNKTDQSHQNFGVKYLT 357
+HR +G++ FLY KVPGKS+AR++ET +IN+LL GF + N D HQNFG L+
Sbjct: 1060 RSHRLKDGMQNASFLYFKVPGKSIARQLETLLINQLLSQGFPIANLADGKHQNFGTSNLS 1119
Query: 358 KDAM 369
D +
Sbjct: 1120 FDGI 1123
>OMO95321.1 GIY-YIG nuclease superfamily [Corchorus olitorius]
Length = 1183
Score = 127 bits (320), Expect = 5e-30
Identities = 62/120 (51%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
Frame = +1
Query: 1 RLLDVIGTKNCPS-PVLSYSYVRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGRI 177
+L+++ +N PVL + + AREQPPP+ SCVY++ RPD K Y+GETDDL GR+
Sbjct: 1057 KLMELYKQRNTSELPVLHFVAIAAREQPPPSTIGASCVYVMFRPDKKLYIGETDDLDGRV 1116
Query: 178 GAHRSIEGLKKVPFLYAKVPGKSVAREIETFIINRLLHSGFELVNKTDQSHQNFGVKYLT 357
AHRS +G++ FLY VPGKS+AR +ET IIN+LL GF L N D HQNFG L+
Sbjct: 1117 RAHRSKDGMQNASFLYFIVPGKSIARLLETLIINQLLSQGFSLTNLADGKHQNFGTSNLS 1176
>KHG14948.1 DNA mismatch repair mutS [Gossypium arboreum]
Length = 827
Score = 125 bits (314), Expect = 3e-29
Identities = 60/124 (48%), Positives = 82/124 (66%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 RLLDVIGTKNCPS-PVLSYSYVRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGRI 177
+L+++ KN PV + + AREQPPP+ SCVY++ RPD K Y+GETDDL GRI
Sbjct: 701 KLMELYKLKNTSDVPVFNCVAIAAREQPPPSTIGASCVYVMFRPDKKLYIGETDDLDGRI 760
Query: 178 GAHRSIEGLKKVPFLYAKVPGKSVAREIETFIINRLLHSGFELVNKTDQSHQNFGVKYLT 357
+HR +G++ FLY VPGKS+AR++ET +IN+LL GF + N D HQNFG L+
Sbjct: 761 RSHRLKDGMQNASFLYFTVPGKSIARQLETLLINQLLSQGFPIANLADGKHQNFGTSNLS 820
Query: 358 KDAM 369
D +
Sbjct: 821 FDGI 824
>XP_017607923.1 PREDICTED: DNA mismatch repair protein MSH1, mitochondrial [Gossypium
arboreum]
Length = 1126
Score = 125 bits (314), Expect = 3e-29
Identities = 60/124 (48%), Positives = 82/124 (66%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 RLLDVIGTKNCPS-PVLSYSYVRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGRI 177
+L+++ KN PV + + AREQPPP+ SCVY++ RPD K Y+GETDDL GRI
Sbjct: 1000 KLMELYKLKNTSDVPVFNCVAIAAREQPPPSTIGASCVYVMFRPDKKLYIGETDDLDGRI 1059
Query: 178 GAHRSIEGLKKVPFLYAKVPGKSVAREIETFIINRLLHSGFELVNKTDQSHQNFGVKYLT 357
+HR +G++ FLY VPGKS+AR++ET +IN+LL GF + N D HQNFG L+
Sbjct: 1060 RSHRLKDGMQNASFLYFTVPGKSIARQLETLLINQLLSQGFPIANLADGKHQNFGTSNLS 1119
Query: 358 KDAM 369
D +
Sbjct: 1120 FDGI 1123
>XP_002964744.1 hypothetical protein SELMODRAFT_230470 [Selaginella moellendorffii]
EFJ33582.1 hypothetical protein SELMODRAFT_230470
[Selaginella moellendorffii]
Length = 1032
Score = 124 bits (310), Expect = 1e-28
Identities = 57/96 (59%), Positives = 74/96 (77%)
Frame = +1
Query: 58 YVRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGRIGAHRSIEGLKKVPFLYAKVP 237
+V AR+QPPP +N SCVYILQRPDGK+YVG+TD+L+GRI +HR+ GLK+ PFLY V
Sbjct: 930 FVGARQQPPPFTSNHSCVYILQRPDGKFYVGQTDNLSGRIASHRTSMGLKQAPFLYLPVS 989
Query: 238 GKSVAREIETFIINRLLHSGFELVNKTDQSHQNFGV 345
KSVA ++ET +I +L G LVNK DQ H++FG+
Sbjct: 990 NKSVACQLETALITQLTQQGLNLVNKVDQRHKHFGI 1025
>EOY06224.1 MUTL protein isoform 2 [Theobroma cacao]
Length = 891
Score = 123 bits (308), Expect = 2e-28
Identities = 56/106 (52%), Positives = 74/106 (69%)
Frame = +1
Query: 40 PVLSYSYVRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGRIGAHRSIEGLKKVPF 219
P+L+ + AREQPPP+ SC+Y++ RPD K Y+GETDDL GR+ +HRS EG++ F
Sbjct: 779 PILNSVAIAAREQPPPSTIGASCLYVMFRPDKKLYIGETDDLDGRVRSHRSKEGMQNATF 838
Query: 220 LYAKVPGKSVAREIETFIINRLLHSGFELVNKTDQSHQNFGVKYLT 357
LY VPGKS+AR++ET +IN+L GF L N D HQNFG L+
Sbjct: 839 LYFIVPGKSIARQLETLLINQLSSQGFPLTNLADGKHQNFGTSSLS 884
>XP_017975472.1 PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X3
[Theobroma cacao]
Length = 944
Score = 123 bits (308), Expect = 2e-28
Identities = 56/106 (52%), Positives = 74/106 (69%)
Frame = +1
Query: 40 PVLSYSYVRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGRIGAHRSIEGLKKVPF 219
P+L+ + AREQPPP+ SC+Y++ RPD K Y+GETDDL GR+ +HRS EG++ F
Sbjct: 832 PILNSVAIAAREQPPPSTIGASCLYVMFRPDKKLYIGETDDLDGRVRSHRSKEGMQNATF 891
Query: 220 LYAKVPGKSVAREIETFIINRLLHSGFELVNKTDQSHQNFGVKYLT 357
LY VPGKS+AR++ET +IN+L GF L N D HQNFG L+
Sbjct: 892 LYFIVPGKSIARQLETLLINQLSSQGFPLTNLADGKHQNFGTSSLS 937
>XP_007035297.2 PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X2
[Theobroma cacao]
Length = 1110
Score = 123 bits (308), Expect = 2e-28
Identities = 56/106 (52%), Positives = 74/106 (69%)
Frame = +1
Query: 40 PVLSYSYVRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGRIGAHRSIEGLKKVPF 219
P+L+ + AREQPPP+ SC+Y++ RPD K Y+GETDDL GR+ +HRS EG++ F
Sbjct: 998 PILNSVAIAAREQPPPSTIGASCLYVMFRPDKKLYIGETDDLDGRVRSHRSKEGMQNATF 1057
Query: 220 LYAKVPGKSVAREIETFIINRLLHSGFELVNKTDQSHQNFGVKYLT 357
LY VPGKS+AR++ET +IN+L GF L N D HQNFG L+
Sbjct: 1058 LYFIVPGKSIARQLETLLINQLSSQGFPLTNLADGKHQNFGTSSLS 1103
>EOY06223.1 MUTL protein isoform 1 [Theobroma cacao]
Length = 1110
Score = 123 bits (308), Expect = 2e-28
Identities = 56/106 (52%), Positives = 74/106 (69%)
Frame = +1
Query: 40 PVLSYSYVRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGRIGAHRSIEGLKKVPF 219
P+L+ + AREQPPP+ SC+Y++ RPD K Y+GETDDL GR+ +HRS EG++ F
Sbjct: 998 PILNSVAIAAREQPPPSTIGASCLYVMFRPDKKLYIGETDDLDGRVRSHRSKEGMQNATF 1057
Query: 220 LYAKVPGKSVAREIETFIINRLLHSGFELVNKTDQSHQNFGVKYLT 357
LY VPGKS+AR++ET +IN+L GF L N D HQNFG L+
Sbjct: 1058 LYFIVPGKSIARQLETLLINQLSSQGFPLTNLADGKHQNFGTSSLS 1103
>XP_017975471.1 PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X1
[Theobroma cacao]
Length = 1137
Score = 123 bits (308), Expect = 2e-28
Identities = 56/106 (52%), Positives = 74/106 (69%)
Frame = +1
Query: 40 PVLSYSYVRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGRIGAHRSIEGLKKVPF 219
P+L+ + AREQPPP+ SC+Y++ RPD K Y+GETDDL GR+ +HRS EG++ F
Sbjct: 1025 PILNSVAIAAREQPPPSTIGASCLYVMFRPDKKLYIGETDDLDGRVRSHRSKEGMQNATF 1084
Query: 220 LYAKVPGKSVAREIETFIINRLLHSGFELVNKTDQSHQNFGVKYLT 357
LY VPGKS+AR++ET +IN+L GF L N D HQNFG L+
Sbjct: 1085 LYFIVPGKSIARQLETLLINQLSSQGFPLTNLADGKHQNFGTSSLS 1130
>XP_019705613.1 PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X2
[Elaeis guineensis]
Length = 892
Score = 122 bits (305), Expect = 5e-28
Identities = 57/103 (55%), Positives = 73/103 (70%)
Frame = +1
Query: 61 VRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGRIGAHRSIEGLKKVPFLYAKVPG 240
V AREQPPP+ SC+Y+L RPD K YVG+TDDL GR+ AHRS EG++ FLY VPG
Sbjct: 786 VGAREQPPPSSVGTSCIYVLFRPDKKLYVGQTDDLVGRVRAHRSKEGMQNAVFLYVIVPG 845
Query: 241 KSVAREIETFIINRLLHSGFELVNKTDQSHQNFGVKYLTKDAM 369
KS+A ++ET ++N+L GF LVNK D H+NFG L +A+
Sbjct: 846 KSIASQLETLLVNQLPLRGFRLVNKADGKHRNFGTSRLPIEAI 888
>XP_002962164.1 hypothetical protein SELMODRAFT_77583 [Selaginella moellendorffii]
EFJ37424.1 hypothetical protein SELMODRAFT_77583
[Selaginella moellendorffii]
Length = 1001
Score = 122 bits (305), Expect = 5e-28
Identities = 56/96 (58%), Positives = 73/96 (76%)
Frame = +1
Query: 58 YVRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGRIGAHRSIEGLKKVPFLYAKVP 237
+V AR+QPPP +N SCVYIL RPDGK+YVG+TD+L+GRI +HR+ GLK+ PFLY V
Sbjct: 899 FVGARQQPPPFTSNHSCVYILHRPDGKFYVGQTDNLSGRIASHRTSMGLKQAPFLYLPVS 958
Query: 238 GKSVAREIETFIINRLLHSGFELVNKTDQSHQNFGV 345
KSVA ++ET +I +L G LVNK DQ H++FG+
Sbjct: 959 NKSVACQLETALITQLTQQGLNLVNKVDQRHKHFGI 994
>XP_010918844.1 PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X1
[Elaeis guineensis]
Length = 1134
Score = 122 bits (305), Expect = 5e-28
Identities = 57/103 (55%), Positives = 73/103 (70%)
Frame = +1
Query: 61 VRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGRIGAHRSIEGLKKVPFLYAKVPG 240
V AREQPPP+ SC+Y+L RPD K YVG+TDDL GR+ AHRS EG++ FLY VPG
Sbjct: 1028 VGAREQPPPSSVGTSCIYVLFRPDKKLYVGQTDDLVGRVRAHRSKEGMQNAVFLYVIVPG 1087
Query: 241 KSVAREIETFIINRLLHSGFELVNKTDQSHQNFGVKYLTKDAM 369
KS+A ++ET ++N+L GF LVNK D H+NFG L +A+
Sbjct: 1088 KSIASQLETLLVNQLPLRGFRLVNKADGKHRNFGTSRLPIEAI 1130
>AIU48198.1 MSH1, partial [Cinnamomum camphora]
Length = 577
Score = 120 bits (302), Expect = 7e-28
Identities = 56/94 (59%), Positives = 70/94 (74%)
Frame = +1
Query: 61 VRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGRIGAHRSIEGLKKVPFLYAKVPG 240
V AREQPPP+ S +Y+L RPD K Y+G+TDDL GR+ AHRS EG++ V FLY VPG
Sbjct: 482 VGAREQPPPSTIGASSIYVLCRPDKKLYIGQTDDLVGRVRAHRSKEGMENVTFLYVLVPG 541
Query: 241 KSVAREIETFIINRLLHSGFELVNKTDQSHQNFG 342
KSVA ++ET +IN+L + GF LVNK D H+NFG
Sbjct: 542 KSVASQLETLLINQLPNRGFRLVNKADGKHRNFG 575
>XP_018686523.1 PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X2
[Musa acuminata subsp. malaccensis]
Length = 893
Score = 121 bits (303), Expect = 9e-28
Identities = 63/125 (50%), Positives = 84/125 (67%), Gaps = 2/125 (1%)
Frame = +1
Query: 1 RLLDVIGTKNCP--SPVLSYSYVRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGR 174
+LLD+ K+ P + V +S V AREQPPP+ S +Y+L RPD Y+G+TDDL GR
Sbjct: 764 KLLDLFKKKSMPELAEVRCFS-VGAREQPPPSTVGTSSIYVLIRPDRTLYIGQTDDLVGR 822
Query: 175 IGAHRSIEGLKKVPFLYAKVPGKSVAREIETFIINRLLHSGFELVNKTDQSHQNFGVKYL 354
+ AHRS E ++ P +Y VPGKSVA ++ET +IN+L SGF LVNK D H+NFGV L
Sbjct: 823 LRAHRSKEDMQNAPIIYVIVPGKSVANQLETLLINQLPISGFRLVNKADGRHRNFGVAGL 882
Query: 355 TKDAM 369
+A+
Sbjct: 883 IMEAL 887
>XP_009411377.1 PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X1
[Musa acuminata subsp. malaccensis]
Length = 1133
Score = 121 bits (303), Expect = 9e-28
Identities = 63/125 (50%), Positives = 84/125 (67%), Gaps = 2/125 (1%)
Frame = +1
Query: 1 RLLDVIGTKNCP--SPVLSYSYVRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGR 174
+LLD+ K+ P + V +S V AREQPPP+ S +Y+L RPD Y+G+TDDL GR
Sbjct: 1004 KLLDLFKKKSMPELAEVRCFS-VGAREQPPPSTVGTSSIYVLIRPDRTLYIGQTDDLVGR 1062
Query: 175 IGAHRSIEGLKKVPFLYAKVPGKSVAREIETFIINRLLHSGFELVNKTDQSHQNFGVKYL 354
+ AHRS E ++ P +Y VPGKSVA ++ET +IN+L SGF LVNK D H+NFGV L
Sbjct: 1063 LRAHRSKEDMQNAPIIYVIVPGKSVANQLETLLINQLPISGFRLVNKADGRHRNFGVAGL 1122
Query: 355 TKDAM 369
+A+
Sbjct: 1123 IMEAL 1127
>AIU48178.1 MSH1, partial [Aristolochia tagala]
Length = 769
Score = 120 bits (302), Expect = 1e-27
Identities = 55/94 (58%), Positives = 68/94 (72%)
Frame = +1
Query: 61 VRAREQPPPNLTNCSCVYILQRPDGKYYVGETDDLAGRIGAHRSIEGLKKVPFLYAKVPG 240
+ REQPPP+ SCVY++ RPD K YVG+TDDL GR+ AHRS EG++ V FLY VPG
Sbjct: 674 IGTREQPPPSTVGASCVYVIFRPDNKLYVGQTDDLIGRVRAHRSKEGMQNVKFLYFTVPG 733
Query: 241 KSVAREIETFIINRLLHSGFELVNKTDQSHQNFG 342
KS+A E+ET +IN+L G LVNK D H+NFG
Sbjct: 734 KSIASELETLLINQLPSRGLRLVNKADGKHRNFG 767