BLASTX nr result
ID: Ephedra29_contig00022212
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00022212
(270 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAT62352.1 Replication factor C subunit 3 [Anthurium amnicola] 96 2e-21
ADE77654.1 unknown [Picea sitchensis] 94 4e-21
AQK62423.1 Replication factor C subunit 3 [Zea mays] 91 4e-21
ONM10134.1 Replication factor C subunit 3 [Zea mays] 91 4e-21
XP_019234178.1 PREDICTED: replication factor C subunit 3-like [N... 88 7e-21
KHN43791.1 Putative replication factor C subunit 3 [Glycine soja] 91 8e-21
KZM99151.1 hypothetical protein DCAR_013487 [Daucus carota subsp... 93 8e-21
XP_013745411.1 PREDICTED: replication factor C subunit 3-like [B... 91 1e-20
XP_017244223.1 PREDICTED: replication factor C subunit 3 isoform... 93 1e-20
XP_017244222.1 PREDICTED: replication factor C subunit 3 isoform... 93 1e-20
XP_006367126.1 PREDICTED: replication factor C subunit 3 isoform... 92 1e-20
XP_006367125.1 PREDICTED: replication factor C subunit 3 isoform... 92 1e-20
CAN65125.1 hypothetical protein VITISV_012412 [Vitis vinifera] 89 1e-20
XP_020096653.1 replication factor C subunit 5 [Ananas comosus] 93 2e-20
KXG37386.1 hypothetical protein SORBI_001G061800 [Sorghum bicolor] 93 2e-20
XP_004981481.1 PREDICTED: replication factor C subunit 5 [Setari... 93 2e-20
ONH94387.1 hypothetical protein PRUPE_7G013300 [Prunus persica] 92 2e-20
KQK86734.1 hypothetical protein SETIT_036332mg [Setaria italica] 93 2e-20
OEL36535.1 Replication factor C subunit 5 [Dichanthelium oligosa... 93 2e-20
XP_016544044.1 PREDICTED: replication factor C subunit 3 isoform... 92 2e-20
>JAT62352.1 Replication factor C subunit 3 [Anthurium amnicola]
Length = 400
Score = 95.5 bits (236), Expect = 2e-21
Identities = 43/71 (60%), Positives = 52/71 (73%)
Frame = -2
Query: 215 YFRTEHTDLPFQSLIKSFSSMLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFY 36
+F+ H L + MLWVDKYRP TLDK +VH ++A NL+ LV+EQDCPHLLFY
Sbjct: 27 FFQFTHLSLSLALSLAGQGKMLWVDKYRPRTLDKITVHEEIARNLKKLVAEQDCPHLLFY 86
Query: 35 GPSGAGKKTLI 3
GPSG+GKKTLI
Sbjct: 87 GPSGSGKKTLI 97
>ADE77654.1 unknown [Picea sitchensis]
Length = 354
Score = 94.4 bits (233), Expect = 4e-21
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP +LDK SVH ++A NL+NLVSE DCPHLLFYGPSGAGKKTLI
Sbjct: 1 MLWVDKYRPRSLDKISVHREIANNLKNLVSEHDCPHLLFYGPSGAGKKTLI 51
>AQK62423.1 Replication factor C subunit 3 [Zea mays]
Length = 196
Score = 91.3 bits (225), Expect = 4e-21
Identities = 41/51 (80%), Positives = 44/51 (86%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP TLDK +VH VA NL+ VSEQDCPHLLFYGPSG+GKKTLI
Sbjct: 1 MLWVDKYRPKTLDKVTVHDQVARNLRKFVSEQDCPHLLFYGPSGSGKKTLI 51
>ONM10134.1 Replication factor C subunit 3 [Zea mays]
Length = 196
Score = 91.3 bits (225), Expect = 4e-21
Identities = 41/51 (80%), Positives = 44/51 (86%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP TLDK +VH VA NL+ VSEQDCPHLLFYGPSG+GKKTLI
Sbjct: 1 MLWVDKYRPKTLDKVTVHDQVAQNLRKFVSEQDCPHLLFYGPSGSGKKTLI 51
>XP_019234178.1 PREDICTED: replication factor C subunit 3-like [Nicotiana
attenuata] XP_019234179.1 PREDICTED: replication factor
C subunit 3-like [Nicotiana attenuata] XP_019234180.1
PREDICTED: replication factor C subunit 3-like
[Nicotiana attenuata] OIT19339.1 replication factor c
subunit 3 [Nicotiana attenuata]
Length = 92
Score = 87.8 bits (216), Expect = 7e-21
Identities = 41/51 (80%), Positives = 42/51 (82%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP TLDK VH DVA NLQ LV DCPHLLFYGPSG+GKKTLI
Sbjct: 1 MLWVDKYRPKTLDKVIVHEDVAQNLQKLVLAGDCPHLLFYGPSGSGKKTLI 51
>KHN43791.1 Putative replication factor C subunit 3 [Glycine soja]
Length = 205
Score = 90.9 bits (224), Expect = 8e-21
Identities = 40/51 (78%), Positives = 45/51 (88%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP TLD+ VH D+A NL+ LV+EQDCPHLLFYGPSG+GKKTLI
Sbjct: 1 MLWVDKYRPKTLDQVMVHTDIARNLKKLVTEQDCPHLLFYGPSGSGKKTLI 51
>KZM99151.1 hypothetical protein DCAR_013487 [Daucus carota subsp. sativus]
Length = 329
Score = 93.2 bits (230), Expect = 8e-21
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP +LDK VH DVA NL+ LVSEQDCPHLLFYGPSGAGKKTLI
Sbjct: 1 MLWVDKYRPRSLDKVIVHQDVAQNLKKLVSEQDCPHLLFYGPSGAGKKTLI 51
>XP_013745411.1 PREDICTED: replication factor C subunit 3-like [Brassica napus]
Length = 203
Score = 90.5 bits (223), Expect = 1e-20
Identities = 40/51 (78%), Positives = 45/51 (88%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP +LDK VH D+A NL+ LV+EQDCPHLLFYGPSG+GKKTLI
Sbjct: 1 MLWVDKYRPKSLDKVIVHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLI 51
>XP_017244223.1 PREDICTED: replication factor C subunit 3 isoform X2 [Daucus carota
subsp. sativus]
Length = 354
Score = 93.2 bits (230), Expect = 1e-20
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP +LDK VH DVA NL+ LVSEQDCPHLLFYGPSGAGKKTLI
Sbjct: 1 MLWVDKYRPRSLDKVIVHQDVAQNLKKLVSEQDCPHLLFYGPSGAGKKTLI 51
>XP_017244222.1 PREDICTED: replication factor C subunit 3 isoform X1 [Daucus carota
subsp. sativus]
Length = 364
Score = 93.2 bits (230), Expect = 1e-20
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP +LDK VH DVA NL+ LVSEQDCPHLLFYGPSGAGKKTLI
Sbjct: 1 MLWVDKYRPRSLDKVIVHQDVAQNLKKLVSEQDCPHLLFYGPSGAGKKTLI 51
>XP_006367126.1 PREDICTED: replication factor C subunit 3 isoform X4 [Solanum
tuberosum]
Length = 290
Score = 92.0 bits (227), Expect = 1e-20
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP TLDK +VH DVA NL+ LVSE DCPHLLFYGPSG+GKKTLI
Sbjct: 1 MLWVDKYRPKTLDKVTVHQDVAQNLRKLVSEGDCPHLLFYGPSGSGKKTLI 51
>XP_006367125.1 PREDICTED: replication factor C subunit 3 isoform X3 [Solanum
tuberosum]
Length = 294
Score = 92.0 bits (227), Expect = 1e-20
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP TLDK +VH DVA NL+ LVSE DCPHLLFYGPSG+GKKTLI
Sbjct: 1 MLWVDKYRPKTLDKVTVHQDVAQNLRKLVSEGDCPHLLFYGPSGSGKKTLI 51
>CAN65125.1 hypothetical protein VITISV_012412 [Vitis vinifera]
Length = 158
Score = 89.0 bits (219), Expect = 1e-20
Identities = 40/51 (78%), Positives = 43/51 (84%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP TLD VH DVA NL+ LV+EQDCPHLLFYGP G+GKKTLI
Sbjct: 1 MLWVDKYRPKTLDNLIVHDDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLI 51
>XP_020096653.1 replication factor C subunit 5 [Ananas comosus]
Length = 354
Score = 92.8 bits (229), Expect = 2e-20
Identities = 41/51 (80%), Positives = 46/51 (90%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP TL+K +VH D+A NL+ LVSEQDCPHLLFYGPSG+GKKTLI
Sbjct: 1 MLWVDKYRPKTLEKITVHEDIARNLKKLVSEQDCPHLLFYGPSGSGKKTLI 51
>KXG37386.1 hypothetical protein SORBI_001G061800 [Sorghum bicolor]
Length = 354
Score = 92.8 bits (229), Expect = 2e-20
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP TLDK +VH VA NL+ LVSEQDCPHLLFYGPSG+GKKTLI
Sbjct: 1 MLWVDKYRPKTLDKVTVHDQVAQNLRKLVSEQDCPHLLFYGPSGSGKKTLI 51
>XP_004981481.1 PREDICTED: replication factor C subunit 5 [Setaria italica]
KQK86733.1 hypothetical protein SETIT_036332mg [Setaria
italica]
Length = 354
Score = 92.8 bits (229), Expect = 2e-20
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP TLDK +VH VA NL+ LVSEQDCPHLLFYGPSG+GKKTLI
Sbjct: 1 MLWVDKYRPKTLDKVTVHDQVAQNLRKLVSEQDCPHLLFYGPSGSGKKTLI 51
>ONH94387.1 hypothetical protein PRUPE_7G013300 [Prunus persica]
Length = 329
Score = 92.4 bits (228), Expect = 2e-20
Identities = 41/51 (80%), Positives = 45/51 (88%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP TLD+ VH D+A NL+ LVSEQDCPHLLFYGPSG+GKKTLI
Sbjct: 1 MLWVDKYRPKTLDQAMVHQDIAQNLKKLVSEQDCPHLLFYGPSGSGKKTLI 51
>KQK86734.1 hypothetical protein SETIT_036332mg [Setaria italica]
Length = 359
Score = 92.8 bits (229), Expect = 2e-20
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP TLDK +VH VA NL+ LVSEQDCPHLLFYGPSG+GKKTLI
Sbjct: 1 MLWVDKYRPKTLDKVTVHDQVAQNLRKLVSEQDCPHLLFYGPSGSGKKTLI 51
>OEL36535.1 Replication factor C subunit 5 [Dichanthelium oligosanthes]
Length = 371
Score = 92.8 bits (229), Expect = 2e-20
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP TLDK +VH VA NL+ LVSEQDCPHLLFYGPSG+GKKTLI
Sbjct: 1 MLWVDKYRPKTLDKVTVHDQVAQNLRKLVSEQDCPHLLFYGPSGSGKKTLI 51
>XP_016544044.1 PREDICTED: replication factor C subunit 3 isoform X2 [Capsicum
annuum]
Length = 348
Score = 92.4 bits (228), Expect = 2e-20
Identities = 43/51 (84%), Positives = 44/51 (86%)
Frame = -2
Query: 155 MLWVDKYRPNTLDKCSVHGDVATNLQNLVSEQDCPHLLFYGPSGAGKKTLI 3
MLWVDKYRP TLDK VH DVA NLQ LVSE DCPHLLFYGPSG+GKKTLI
Sbjct: 1 MLWVDKYRPKTLDKVIVHQDVAQNLQKLVSEGDCPHLLFYGPSGSGKKTLI 51