BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00022145
         (808 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_009392829.1 PREDICTED: RNA polymerase II transcription factor...   306   2e-99
XP_009392826.1 PREDICTED: RNA polymerase II transcription factor...   306   5e-99
XP_010940415.1 PREDICTED: RNA polymerase II transcription factor...   297   9e-96
XP_008778431.1 PREDICTED: RNA polymerase II transcription factor...   297   1e-95
XP_009392827.1 PREDICTED: RNA polymerase II transcription factor...   297   2e-95
XP_020113267.1 RNA polymerase II transcription factor B subunit ...   296   2e-95
KMZ72824.1 General transcription factor IIH subunit [Zostera mar...   290   5e-93
JAT40123.1 General transcription factor IIH subunit 4 [Anthurium...   288   3e-92
XP_010242943.1 PREDICTED: RNA polymerase II transcription factor...   288   5e-92
KVH96938.1 Transcription factor TFIIH subunit p52/Tfb2 [Cynara c...   285   2e-91
OMO63641.1 Transcription factor TFIIH subunit p52/Tfb2 [Corchoru...   280   2e-91
KJB69494.1 hypothetical protein B456_011G026700 [Gossypium raimo...   283   2e-91
OAY83767.1 General transcription factor IIH subunit 4 [Ananas co...   284   7e-91
XP_016711087.1 PREDICTED: RNA polymerase II transcription factor...   283   1e-90
XP_016899177.1 PREDICTED: RNA polymerase II transcription factor...   281   3e-90
EOY28282.1 Transcription factor-related isoform 4 [Theobroma cacao]   283   3e-90
XP_012456827.1 PREDICTED: general transcription factor IIH subun...   283   3e-90
XP_017647175.1 PREDICTED: RNA polymerase II transcription factor...   283   3e-90
EOY28279.1 Transcription factor-related isoform 1 [Theobroma cacao]   283   3e-90
XP_010057432.1 PREDICTED: RNA polymerase II transcription factor...   280   8e-90

>XP_009392829.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
           isoform X4 [Musa acuminata subsp. malaccensis]
          Length = 451

 Score =  306 bits (785), Expect = 2e-99
 Identities = 156/231 (67%), Positives = 201/231 (87%), Gaps = 1/231 (0%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+V+II+KNFMD+VAALPA+KLD+LY+S FICEAVLRSLPP+AK+YVLQMLYID+ I A
Sbjct: 1   MPQVRIIAKNFMDLVAALPAMKLDKLYESTFICEAVLRSLPPMAKRYVLQMLYIDTLITA 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KS+E +++PDGLSKHKVA++RL+QLRVF+EV++ +KK+ SY +NPKFQ+ ++K + SGG 
Sbjct: 61  KSMEEWLLPDGLSKHKVAIDRLLQLRVFLEVTD-RKKETSYKINPKFQSNIQKYLVSGGT 119

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSA-FDEITSEPFSSSMLRICQRA 654
            PREPMPLS   RLPT E+L +YA +QWE FLLQL+NSA  +++TS  FSSSM+++ QR 
Sbjct: 120 LPREPMPLSITVRLPTLEDLETYASEQWECFLLQLINSAQAEKLTS--FSSSMIKVFQR- 176

Query: 655 GLLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           GLLS+R+NE  +LTE+GFQF+LMDT++QLW IIREYISTAEDRGVD  +LI
Sbjct: 177 GLLSARENEPPKLTENGFQFLLMDTNAQLWYIIREYISTAEDRGVDPTDLI 227


>XP_009392826.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
           isoform X1 [Musa acuminata subsp. malaccensis]
          Length = 479

 Score =  306 bits (785), Expect = 5e-99
 Identities = 156/231 (67%), Positives = 201/231 (87%), Gaps = 1/231 (0%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+V+II+KNFMD+VAALPA+KLD+LY+S FICEAVLRSLPP+AK+YVLQMLYID+ I A
Sbjct: 1   MPQVRIIAKNFMDLVAALPAMKLDKLYESTFICEAVLRSLPPMAKRYVLQMLYIDTLITA 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KS+E +++PDGLSKHKVA++RL+QLRVF+EV++ +KK+ SY +NPKFQ+ ++K + SGG 
Sbjct: 61  KSMEEWLLPDGLSKHKVAIDRLLQLRVFLEVTD-RKKETSYKINPKFQSNIQKYLVSGGT 119

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSA-FDEITSEPFSSSMLRICQRA 654
            PREPMPLS   RLPT E+L +YA +QWE FLLQL+NSA  +++TS  FSSSM+++ QR 
Sbjct: 120 LPREPMPLSITVRLPTLEDLETYASEQWECFLLQLINSAQAEKLTS--FSSSMIKVFQR- 176

Query: 655 GLLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           GLLS+R+NE  +LTE+GFQF+LMDT++QLW IIREYISTAEDRGVD  +LI
Sbjct: 177 GLLSARENEPPKLTENGFQFLLMDTNAQLWYIIREYISTAEDRGVDPTDLI 227


>XP_010940415.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
           isoform X1 [Elaeis guineensis] XP_010940416.1 PREDICTED:
           RNA polymerase II transcription factor B subunit 2
           isoform X1 [Elaeis guineensis]
          Length = 451

 Score =  297 bits (761), Expect = 9e-96
 Identities = 149/231 (64%), Positives = 198/231 (85%), Gaps = 1/231 (0%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+V+I++KNFMDMVAALPA+KLD+LY S FICEAVLRSLPP+AKKYVLQML++DSP+ A
Sbjct: 1   MPEVRIVAKNFMDMVAALPAMKLDKLYGSTFICEAVLRSLPPLAKKYVLQMLFVDSPVTA 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KS+E +++ DG SKHKV+++RL+QLRVF+EV++ +KK+ SY +N KFQ+ ++K +  GG 
Sbjct: 61  KSMEEWLLADGYSKHKVSIDRLLQLRVFLEVND-RKKETSYKMNTKFQSNMQKYLVFGGT 119

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSA-FDEITSEPFSSSMLRICQRA 654
            PREPMPLS   RLPT E+L +YA++QWE FLLQL+NSA  + +TS  FSSS++R+ QR 
Sbjct: 120 LPREPMPLSVTVRLPTLEDLEAYALEQWECFLLQLINSAQAERLTS--FSSSLMRVFQR- 176

Query: 655 GLLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           GLLS+R+NE+ +LTE+GFQF+LMDT++QLW IIREYIS++EDRGVD  +LI
Sbjct: 177 GLLSARENEAPKLTENGFQFLLMDTNAQLWYIIREYISSSEDRGVDPTDLI 227


>XP_008778431.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
           isoform X1 [Phoenix dactylifera]
          Length = 451

 Score =  297 bits (760), Expect = 1e-95
 Identities = 149/230 (64%), Positives = 194/230 (84%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+V+I++KNFMDMVAALPA+KLD+LY S FICEAVLRSLPP+AKKYVLQML++DSP+ A
Sbjct: 1   MPEVRIVAKNFMDMVAALPAMKLDKLYSSTFICEAVLRSLPPLAKKYVLQMLFVDSPVTA 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KS+E +++ DG SKHKVA++RL+QLR+F+EV++ +KK+ SY +N KFQ+ ++K +  GG 
Sbjct: 61  KSMEEWLLADGYSKHKVAIDRLLQLRIFLEVND-RKKETSYKMNTKFQSNMQKYLVFGGT 119

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 657
            PREPMPLS   RLPT E+L  YA++QWE FLLQL+NSA  E  S  FSSSM+R+ QR G
Sbjct: 120 LPREPMPLSVTVRLPTLEDLEVYALEQWECFLLQLINSAQAE-RSTSFSSSMMRVFQR-G 177

Query: 658 LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           LLS+R+N + +LTE+GFQF+LMDT++QLW IIREYIS++EDRGVD  +LI
Sbjct: 178 LLSARENGAPKLTENGFQFLLMDTNAQLWYIIREYISSSEDRGVDPTDLI 227


>XP_009392827.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
           isoform X2 [Musa acuminata subsp. malaccensis]
          Length = 472

 Score =  297 bits (761), Expect = 2e-95
 Identities = 152/231 (65%), Positives = 195/231 (84%), Gaps = 1/231 (0%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+V+II+KNFMD+VAALPA+KLD+LY+S FICEAVLRSLPP+AK+YVLQMLYID+ I A
Sbjct: 1   MPQVRIIAKNFMDLVAALPAMKLDKLYESTFICEAVLRSLPPMAKRYVLQMLYIDTLITA 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KS+E +++PDGLSKHKVA++RL+QLRVF+EV++ +KK+ SY +NPKFQ+ ++K + SGG 
Sbjct: 61  KSMEEWLLPDGLSKHKVAIDRLLQLRVFLEVTD-RKKETSYKINPKFQSNIQKYLVSGGT 119

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSA-FDEITSEPFSSSMLRICQRA 654
            PREPMPLS   RLPT E+L +YA +QWE FLLQL+NSA  +++TS  FSSSM++IC   
Sbjct: 120 LPREPMPLSITVRLPTLEDLETYASEQWECFLLQLINSAQAEKLTS--FSSSMIKIC--- 174

Query: 655 GLLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
                R+NE  +LTE+GFQF+LMDT++QLW IIREYISTAEDRGVD  +LI
Sbjct: 175 -----RENEPPKLTENGFQFLLMDTNAQLWYIIREYISTAEDRGVDPTDLI 220


>XP_020113267.1 RNA polymerase II transcription factor B subunit 2 isoform X1
           [Ananas comosus]
          Length = 452

 Score =  296 bits (759), Expect = 2e-95
 Identities = 154/231 (66%), Positives = 192/231 (83%), Gaps = 1/231 (0%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+V+I+ KNFMD+VAALPA KLD+LYDS FICEAVLRSLPP+AKKYVLQML+ID P+ A
Sbjct: 1   MPQVRIVPKNFMDLVAALPAAKLDKLYDSVFICEAVLRSLPPLAKKYVLQMLFIDFPVTA 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KS+E +V+ DGLSKHKVA++RL+QLRV  EVSE +KK+ SY +NPKFQ  L++ +T GG 
Sbjct: 61  KSMEEWVLADGLSKHKVAIDRLLQLRVIHEVSE-RKKETSYRMNPKFQKNLQQYLTHGGT 119

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSA-FDEITSEPFSSSMLRICQRA 654
            PREPMP +   RLPT E+L  YA +QWE FLLQL+NS+  + +TS  FSSS +R+ QR 
Sbjct: 120 LPREPMPPNVTVRLPTLEDLEVYAHQQWECFLLQLINSSQAERLTS--FSSSTMRVFQR- 176

Query: 655 GLLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           GLLSSR+NE+ +LTE+GFQF+LMDT++QLW IIREYIST+EDRGVD  +LI
Sbjct: 177 GLLSSRENEAPKLTENGFQFLLMDTNAQLWYIIREYISTSEDRGVDPTDLI 227


>KMZ72824.1 General transcription factor IIH subunit [Zostera marina]
          Length = 451

 Score =  290 bits (743), Expect = 5e-93
 Identities = 147/230 (63%), Positives = 190/230 (82%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+VKI+++NFMDMVAALPA+KLD+LYDS FICEAVLRSLPP+AKKYVLQMLY++ P+ A
Sbjct: 1   MPQVKIVARNFMDMVAALPAMKLDKLYDSTFICEAVLRSLPPLAKKYVLQMLYLEIPVTA 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KS+  +V+PDG+SKHKVA++RL+QLR+FI+V + +KK+ SY L+ KFQ+ +RK +  GG 
Sbjct: 61  KSMGEWVLPDGMSKHKVAISRLLQLRIFIDVVD-RKKETSYRLDTKFQSNIRKCLIHGGV 119

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 657
           PPRE MP +   RLPT ++L  YA +QWE FLLQL++S   E  S  F+S ML+  QR G
Sbjct: 120 PPRESMPSNITVRLPTLDDLECYAHEQWECFLLQLISSGQAE-RSTSFNSYMLKTFQR-G 177

Query: 658 LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           LLSSR+NE+ RLTE+GFQF+LMDT++QLW IIREYIST+EDRG+D  +LI
Sbjct: 178 LLSSRENEAPRLTENGFQFLLMDTNAQLWYIIREYISTSEDRGIDPTDLI 227


>JAT40123.1 General transcription factor IIH subunit 4 [Anthurium amnicola]
           JAT54784.1 General transcription factor IIH subunit 4
           [Anthurium amnicola]
          Length = 452

 Score =  288 bits (738), Expect = 3e-92
 Identities = 146/230 (63%), Positives = 190/230 (82%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+V++I+KNFMDMVAALPA+KLD+LYDS FICEAVLRSLPP+AKKYVLQML+ID P++A
Sbjct: 1   MPQVRLIAKNFMDMVAALPAMKLDKLYDSTFICEAVLRSLPPLAKKYVLQMLFIDVPVSA 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KS+E +V+ DG SKHKVA++RL+QLR+F+EV + +KK+ SY LNPK Q  LRK +  GG 
Sbjct: 61  KSMEEWVLSDGFSKHKVAIDRLLQLRIFLEVID-RKKETSYRLNPKVQGNLRKYLVHGGT 119

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 657
            PREPMP S   RLPT E+L +YA++QWE FLLQL++S   E  +  F+ SM+++ QR G
Sbjct: 120 LPREPMPSSVTVRLPTVEDLDAYALQQWECFLLQLISSGQAERLT-GFNPSMMKVFQR-G 177

Query: 658 LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           LLS+R+NE+ +LTE+GFQF+LMD ++QLW +IREYIST+E  GVD A+LI
Sbjct: 178 LLSARENEAPKLTENGFQFLLMDINAQLWYMIREYISTSEGHGVDPADLI 227


>XP_010242943.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
           [Nelumbo nucifera]
          Length = 451

 Score =  288 bits (736), Expect = 5e-92
 Identities = 148/230 (64%), Positives = 190/230 (82%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+VKII+KNFMDMVAALPA+KLD+LYD+ FICEAVLRSLPP+AKKY LQMLYID P+  
Sbjct: 1   MPQVKIIAKNFMDMVAALPAMKLDKLYDNTFICEAVLRSLPPLAKKYALQMLYIDVPVPV 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KS+E +V+PDG SKH+VA++RL+QLRVFIE +  +K++ SYLL+PKF++ L+K +  GG 
Sbjct: 61  KSMEEWVLPDGFSKHRVAIDRLIQLRVFIE-NTDRKRETSYLLHPKFKSNLQKYLVYGGV 119

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 657
            PREPMP +   RLPT EEL +YA++QWE FLLQL++S+  E  +  FS SM+++ QR G
Sbjct: 120 LPREPMPSNITVRLPTLEELDAYALEQWECFLLQLISSSHAERLTN-FSPSMMKVFQR-G 177

Query: 658 LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           LLS R+ +  RLTESGFQF+LMDT++QLW IIREYIS +EDRG+D A+LI
Sbjct: 178 LLSQRE-KGPRLTESGFQFLLMDTNAQLWYIIREYISNSEDRGLDPADLI 226


>KVH96938.1 Transcription factor TFIIH subunit p52/Tfb2 [Cynara cardunculus
           var. scolymus]
          Length = 406

 Score =  285 bits (729), Expect = 2e-91
 Identities = 144/230 (62%), Positives = 186/230 (80%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+V+II+KNFMDMVA+LPA+KLD+LY++ FICEA+LRSLPP+AKKYVLQ+LYID+P+ A
Sbjct: 1   MPQVRIIAKNFMDMVASLPAMKLDRLYENAFICEAILRSLPPLAKKYVLQLLYIDAPVTA 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
            SL+ +V+ DG +KH+VAV+RL+QLR+F E  + +KK+ +Y LN  FQ  LRK I  GG 
Sbjct: 61  SSLQEWVLVDGATKHRVAVDRLIQLRIFTETVD-RKKEATYKLNLMFQMNLRKHIVHGGV 119

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 657
            PREPM  +   RLP+ EEL +YA +QWE FLL L+NSA  E+T++  S SM+++ QR G
Sbjct: 120 LPREPMAANITVRLPSLEELDNYASQQWECFLLHLINSAEVEVTTKSISLSMMKVFQR-G 178

Query: 658 LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           LLS R NE  RLTESGFQF+LMDT++QLW I+REYIS +EDRGVDSA+LI
Sbjct: 179 LLSQRDNEGPRLTESGFQFLLMDTNAQLWYIVREYISNSEDRGVDSADLI 228


>OMO63641.1 Transcription factor TFIIH subunit p52/Tfb2 [Corchorus olitorius]
          Length = 269

 Score =  280 bits (716), Expect = 2e-91
 Identities = 147/230 (63%), Positives = 184/230 (80%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+V+II+KNFMDMVA+LPA+KLD LY + FICEA+LRSLPP+AKKYVLQMLYID PI +
Sbjct: 1   MPQVRIIAKNFMDMVASLPAIKLDMLYRNQFICEAILRSLPPLAKKYVLQMLYIDVPITS 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KSL  +V+ DG SKHKVA++RL+QLR+ +EV + +KK+ +Y LNP FQ  LRK +  GG 
Sbjct: 61  KSLMEWVLADGSSKHKVAIDRLIQLRI-LEVVD-RKKETTYKLNPTFQTNLRKHLVYGGI 118

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 657
            PREPMP S  ARLPT EEL  YA+ +WE FLLQL++    E T+  FSSSM+RI QR G
Sbjct: 119 LPREPMPSSVTARLPTVEELDEYALDKWERFLLQLISPGQAE-TATSFSSSMMRIFQR-G 176

Query: 658 LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           L+  R+ E+ RLTESGFQF+LMDT++QLW IIREYIS +E++GVD A+LI
Sbjct: 177 LIRQREKEAPRLTESGFQFLLMDTNAQLWYIIREYISNSEEQGVDQADLI 226


>KJB69494.1 hypothetical protein B456_011G026700 [Gossypium raimondii]
          Length = 362

 Score =  283 bits (724), Expect = 2e-91
 Identities = 150/230 (65%), Positives = 183/230 (79%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+VKII+KNFMDMVA+LPA+KLD LY + FICEA+LRSLPP+AKKYVLQMLYID PI +
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDLLYRNQFICEAILRSLPPLAKKYVLQMLYIDIPITS 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KSL+ +++ DG SKHKVA++RL+QLRVF  +   +KK+ +Y LN  FQ  LRK + SGG 
Sbjct: 61  KSLQEWLLADGSSKHKVAIDRLIQLRVFEVI--DRKKETTYKLNSTFQTNLRKHMISGGI 118

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 657
            PREPMP S  ARLPT EEL +YA +QWE FLLQL++S   E  S  FSSSM+RI QR G
Sbjct: 119 LPREPMPQSVTARLPTSEELDAYAHEQWECFLLQLISSGQAE-KSTSFSSSMMRIFQR-G 176

Query: 658 LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           LL  R  E+ RLTESGFQF+LMDT++QLW IIREYIS +E++GVD A+LI
Sbjct: 177 LLRQRDKEAPRLTESGFQFLLMDTNAQLWYIIREYISNSEEQGVDQADLI 226


>OAY83767.1 General transcription factor IIH subunit 4 [Ananas comosus]
          Length = 434

 Score =  284 bits (727), Expect = 7e-91
 Identities = 154/251 (61%), Positives = 192/251 (76%), Gaps = 21/251 (8%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+V+I+ KNFMD+VAALPA KLD+LYDS FICEAVLRSLPP+AKKYVLQML+ID P+ A
Sbjct: 1   MPQVRIVPKNFMDLVAALPAAKLDKLYDSVFICEAVLRSLPPLAKKYVLQMLFIDFPVMA 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KS+E +V+ DGLSKHKVA++RL+QLRV  EVSE +KK+ SY +NPKFQ  L++ +T GG 
Sbjct: 61  KSMEEWVLADGLSKHKVAIDRLLQLRVIHEVSE-RKKETSYRMNPKFQKNLQQYLTHGGT 119

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSA-FDEITSEPFSSSMLRICQRA 654
            PREPMP +   RLPT E+L  YA +QWE FLLQL+NS+  + +TS  FSSS +R+ QR 
Sbjct: 120 LPREPMPPNVTVRLPTLEDLEVYAHQQWECFLLQLINSSQAERLTS--FSSSTMRVFQR- 176

Query: 655 GLLSSR--------------------QNESSRLTESGFQFVLMDTSSQLWQIIREYISTA 774
           GLLSSR                    +NE+ +LTE+GFQF+LMDT++QLW IIREYIST+
Sbjct: 177 GLLSSRFWFRDLPLFDCHMFCIMLLLENEAPKLTENGFQFLLMDTNAQLWYIIREYISTS 236

Query: 775 EDRGVDSAELI 807
           EDRGVD  +LI
Sbjct: 237 EDRGVDPTDLI 247


>XP_016711087.1 PREDICTED: RNA polymerase II transcription factor B subunit 2-like
           [Gossypium hirsutum]
          Length = 415

 Score =  283 bits (724), Expect = 1e-90
 Identities = 150/230 (65%), Positives = 183/230 (79%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+VKII+KNFMDMVA+LPA+KLD LY + FICEA+LRSLPP+AKKYVLQMLYID PI +
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDLLYRNQFICEAILRSLPPLAKKYVLQMLYIDIPITS 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KSL+ +++ DG SKHKVA++RL+QLRVF  +   +KK+ +Y LN  FQ  LRK + SGG 
Sbjct: 61  KSLQEWLLADGSSKHKVAIDRLIQLRVFEVI--DRKKETTYKLNSTFQTNLRKHMISGGI 118

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 657
            PREPMP S  ARLPT EEL +YA +QWE FLLQL++S   E  S  FSSSM+RI QR G
Sbjct: 119 LPREPMPQSVTARLPTSEELDAYAHEQWECFLLQLISSGQAE-KSTSFSSSMMRIFQR-G 176

Query: 658 LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           LL  R  E+ RLTESGFQF+LMDT++QLW IIREYIS +E++GVD A+LI
Sbjct: 177 LLRQRDKEAPRLTESGFQFLLMDTNAQLWYIIREYISNSEEQGVDQADLI 226


>XP_016899177.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
           [Cucumis melo]
          Length = 395

 Score =  281 bits (720), Expect = 3e-90
 Identities = 144/230 (62%), Positives = 190/230 (82%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+VKII+KNFMDMVA+LPA+KLDQLY++ FICEA+LRSLPP+AKK+VLQMLYID+P++A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KS+E +V+PDG+SK+KVAV+RL+QLRVFIE ++ +K++ +Y LNP FQ  L+K++  G  
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETAD-RKRETTYRLNPTFQANLQKLLIHGEV 119

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 657
             REPMP +   RLP+ E+L +YA+ QWE FLLQL+NS   E  S   SSS++++ Q+ G
Sbjct: 120 LAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSN-ISSSVMKVFQK-G 177

Query: 658 LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           LLS R  E+ RLTESGFQF+LM+T++QLW IIREYIS AE+RGVD A+LI
Sbjct: 178 LLSQRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLI 227


>EOY28282.1 Transcription factor-related isoform 4 [Theobroma cacao]
          Length = 445

 Score =  283 bits (724), Expect = 3e-90
 Identities = 149/230 (64%), Positives = 185/230 (80%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+VKII+KNFMDMVA+LPA+KLD LY + FICEA+LRS+PP+AKKYVLQMLYID P+ A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDMLYRNQFICEAILRSMPPLAKKYVLQMLYIDVPVTA 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KSLE +V+ DG SKHKVA++RL+QLR+ +EV + +KK+ SY LNP FQ  LRK +  GG 
Sbjct: 61  KSLEEWVLADGSSKHKVAIDRLIQLRI-LEVID-RKKETSYKLNPTFQTNLRKHLIYGGI 118

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 657
            PREPMP +   RLPT EEL +YA +QWE FLLQL++S   E  +  FSSSM+RI QR G
Sbjct: 119 LPREPMPSNVTVRLPTSEELDAYAHEQWECFLLQLISSGQAEKPTN-FSSSMMRIFQR-G 176

Query: 658 LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           LL  R+ E+ RLTESGFQF+LMDT++QLW IIREYIS +E++GVD A+LI
Sbjct: 177 LLCQREKEAPRLTESGFQFLLMDTNAQLWYIIREYISNSEEQGVDQADLI 226


>XP_012456827.1 PREDICTED: general transcription factor IIH subunit 4 [Gossypium
           raimondii] KJB69492.1 hypothetical protein
           B456_011G026700 [Gossypium raimondii]
          Length = 451

 Score =  283 bits (724), Expect = 3e-90
 Identities = 150/230 (65%), Positives = 183/230 (79%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+VKII+KNFMDMVA+LPA+KLD LY + FICEA+LRSLPP+AKKYVLQMLYID PI +
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDLLYRNQFICEAILRSLPPLAKKYVLQMLYIDIPITS 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KSL+ +++ DG SKHKVA++RL+QLRVF  +   +KK+ +Y LN  FQ  LRK + SGG 
Sbjct: 61  KSLQEWLLADGSSKHKVAIDRLIQLRVFEVI--DRKKETTYKLNSTFQTNLRKHMISGGI 118

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 657
            PREPMP S  ARLPT EEL +YA +QWE FLLQL++S   E  S  FSSSM+RI QR G
Sbjct: 119 LPREPMPQSVTARLPTSEELDAYAHEQWECFLLQLISSGQAE-KSTSFSSSMMRIFQR-G 176

Query: 658 LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           LL  R  E+ RLTESGFQF+LMDT++QLW IIREYIS +E++GVD A+LI
Sbjct: 177 LLRQRDKEAPRLTESGFQFLLMDTNAQLWYIIREYISNSEEQGVDQADLI 226


>XP_017647175.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
           [Gossypium arboreum] KHG26049.1 General transcription
           factor IIH subunit 4 [Gossypium arboreum]
          Length = 451

 Score =  283 bits (724), Expect = 3e-90
 Identities = 150/230 (65%), Positives = 183/230 (79%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+VKII+KNFMDMVA+LPA+KLD LY + FICEA+LRSLPP+AKKYVLQMLYID PI +
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDLLYRNQFICEAILRSLPPLAKKYVLQMLYIDIPITS 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KSL+ +++ DG SKHKVA++RL+QLRVF  +   +KK+ +Y LN  FQ  LRK + SGG 
Sbjct: 61  KSLQEWLLADGSSKHKVAIDRLIQLRVFEVI--DRKKETTYKLNSTFQTNLRKHMISGGI 118

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 657
            PREPMP S  ARLPT EEL +YA +QWE FLLQL++S   E  S  FSSSM+RI QR G
Sbjct: 119 LPREPMPQSVTARLPTSEELDAYAHEQWECFLLQLISSGQAE-KSTSFSSSMMRIFQR-G 176

Query: 658 LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           LL  R  E+ RLTESGFQF+LMDT++QLW IIREYIS +E++GVD A+LI
Sbjct: 177 LLRQRDKEAPRLTESGFQFLLMDTNAQLWYIIREYISNSEEQGVDQADLI 226


>EOY28279.1 Transcription factor-related isoform 1 [Theobroma cacao]
          Length = 451

 Score =  283 bits (724), Expect = 3e-90
 Identities = 149/230 (64%), Positives = 185/230 (80%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+VKII+KNFMDMVA+LPA+KLD LY + FICEA+LRS+PP+AKKYVLQMLYID P+ A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDMLYRNQFICEAILRSMPPLAKKYVLQMLYIDVPVTA 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KSLE +V+ DG SKHKVA++RL+QLR+ +EV + +KK+ SY LNP FQ  LRK +  GG 
Sbjct: 61  KSLEEWVLADGSSKHKVAIDRLIQLRI-LEVID-RKKETSYKLNPTFQTNLRKHLIYGGI 118

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 657
            PREPMP +   RLPT EEL +YA +QWE FLLQL++S   E  +  FSSSM+RI QR G
Sbjct: 119 LPREPMPSNVTVRLPTSEELDAYAHEQWECFLLQLISSGQAEKPTN-FSSSMMRIFQR-G 176

Query: 658 LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           LL  R+ E+ RLTESGFQF+LMDT++QLW IIREYIS +E++GVD A+LI
Sbjct: 177 LLCQREKEAPRLTESGFQFLLMDTNAQLWYIIREYISNSEEQGVDQADLI 226


>XP_010057432.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
           isoform X2 [Eucalyptus grandis]
          Length = 398

 Score =  280 bits (717), Expect = 8e-90
 Identities = 146/230 (63%), Positives = 181/230 (78%)
 Frame = +1

Query: 118 MPKVKIISKNFMDMVAALPAVKLDQLYDSYFICEAVLRSLPPVAKKYVLQMLYIDSPIAA 297
           MP+VKII++NFMDMVAALPA+KLDQLY + FICEA+LRSLPP+AKKYV+QMLYI+  +  
Sbjct: 1   MPQVKIIARNFMDMVAALPAMKLDQLYQNAFICEAILRSLPPLAKKYVIQMLYIEEAVTT 60

Query: 298 KSLEAYVIPDGLSKHKVAVNRLMQLRVFIEVSESKKKDVSYLLNPKFQNQLRKVITSGGA 477
           KS+E +V+PDGLSKHKVA++RL+QLR+F E  + +    SY LNP FQ  L+K IT GG 
Sbjct: 61  KSIEEWVLPDGLSKHKVAIDRLLQLRIFSEAFD-RSSGTSYRLNPTFQTNLQKHITCGGV 119

Query: 478 PPREPMPLSSIARLPTDEELGSYAMKQWENFLLQLVNSAFDEITSEPFSSSMLRICQRAG 657
            PREPMP S  ARLP+ E+L  +A++QWE FLLQL+NS   E  +   S SM+RI QR G
Sbjct: 120 LPREPMPSSITARLPSLEDLAVFALEQWECFLLQLINSTQAEKMTN-ISPSMMRIFQR-G 177

Query: 658 LLSSRQNESSRLTESGFQFVLMDTSSQLWQIIREYISTAEDRGVDSAELI 807
           LL+ R  E  RLTESGFQF+LMDT++QLW IIREYIS +E+R VDSA+LI
Sbjct: 178 LLTQRDKEPPRLTESGFQFLLMDTNAQLWYIIREYISNSEERDVDSADLI 227