BLASTX nr result

ID: Ephedra29_contig00021542 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00021542
         (392 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_016680586.1 PREDICTED: gamma-tubulin complex component 3-like...    58   4e-07
XP_012459950.1 PREDICTED: gamma-tubulin complex component 3 [Gos...    58   4e-07
XP_001760684.1 gamma tubulin ring complex protein 3 [Physcomitre...    56   1e-06
JAU68546.1 Gamma-tubulin complex component 3, partial [Noccaea c...    54   3e-06
XP_001782201.1 gamma tubulin ring complex protein 3 [Physcomitre...    55   4e-06
XP_018469752.1 PREDICTED: gamma-tubulin complex component 3 [Rap...    55   4e-06
XP_017615941.1 PREDICTED: gamma-tubulin complex component 3 [Gos...    55   4e-06
XP_016738670.1 PREDICTED: gamma-tubulin complex component 3-like...    55   4e-06
XP_019165844.1 PREDICTED: gamma-tubulin complex component 3 isof...    54   6e-06
XP_006289455.1 hypothetical protein CARUB_v10002970mg [Capsella ...    54   6e-06
XP_002532346.1 PREDICTED: gamma-tubulin complex component 3 [Ric...    54   6e-06
XP_019165843.1 PREDICTED: gamma-tubulin complex component 3 isof...    54   6e-06
XP_002964155.1 hypothetical protein SELMODRAFT_438859 [Selaginel...    54   8e-06

>XP_016680586.1 PREDICTED: gamma-tubulin complex component 3-like [Gossypium
           hirsutum]
          Length = 851

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 23/43 (53%), Positives = 36/43 (83%)
 Frame = +3

Query: 261 ICQEVSEVIRSALVRDVLYACRGVDGQFMKFFTDLDGYAIPEN 389
           + +E +EV    LVRDVLYAC+G+DG+++KF ++LDGYA+P++
Sbjct: 180 LVEEENEVTEEVLVRDVLYACQGIDGKYVKFDSNLDGYALPDS 222


>XP_012459950.1 PREDICTED: gamma-tubulin complex component 3 [Gossypium raimondii]
           KJB76668.1 hypothetical protein B456_012G099300
           [Gossypium raimondii] KJB76669.1 hypothetical protein
           B456_012G099300 [Gossypium raimondii] KJB76670.1
           hypothetical protein B456_012G099300 [Gossypium
           raimondii]
          Length = 851

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 23/43 (53%), Positives = 36/43 (83%)
 Frame = +3

Query: 261 ICQEVSEVIRSALVRDVLYACRGVDGQFMKFFTDLDGYAIPEN 389
           + +E +EV    LVRDVLYAC+G+DG+++KF ++LDGYA+P++
Sbjct: 180 LVEEENEVTEEVLVRDVLYACQGIDGKYVKFDSNLDGYALPDS 222


>XP_001760684.1 gamma tubulin ring complex protein 3 [Physcomitrella patens]
           EDQ74423.1 gamma tubulin ring complex protein 3
           [Physcomitrella patens]
          Length = 912

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 25/44 (56%), Positives = 34/44 (77%)
 Frame = +3

Query: 258 EICQEVSEVIRSALVRDVLYACRGVDGQFMKFFTDLDGYAIPEN 389
           EI Q  S+V   A+VRDVLYAC+G+DG+++KF  D+DGY I E+
Sbjct: 221 EIVQSESDVSELAIVRDVLYACQGIDGRYVKFNKDVDGYMIDES 264


>JAU68546.1 Gamma-tubulin complex component 3, partial [Noccaea caerulescens]
          Length = 174

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 21/40 (52%), Positives = 33/40 (82%)
 Frame = +3

Query: 261 ICQEVSEVIRSALVRDVLYACRGVDGQFMKFFTDLDGYAI 380
           + +E +EV    LVRDVLYAC+G+DG+++KF +++DGYA+
Sbjct: 56  LVKEENEVTEEVLVRDVLYACQGIDGKYVKFNSEIDGYAV 95


>XP_001782201.1 gamma tubulin ring complex protein 3 [Physcomitrella patens]
           EDQ53024.1 gamma tubulin ring complex protein 3
           [Physcomitrella patens]
          Length = 821

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 24/44 (54%), Positives = 33/44 (75%)
 Frame = +3

Query: 258 EICQEVSEVIRSALVRDVLYACRGVDGQFMKFFTDLDGYAIPEN 389
           EI Q  S+V   A+VRDVLYAC+G+DG+++K+  D DGY I E+
Sbjct: 131 EIIQSESDVSEMAIVRDVLYACQGIDGRYVKYNEDADGYMIDES 174


>XP_018469752.1 PREDICTED: gamma-tubulin complex component 3 [Raphanus sativus]
          Length = 851

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 22/40 (55%), Positives = 33/40 (82%)
 Frame = +3

Query: 261 ICQEVSEVIRSALVRDVLYACRGVDGQFMKFFTDLDGYAI 380
           + +E SEV    LVRDVLYAC+G+DG+++KF +++DGYA+
Sbjct: 187 LIKEESEVTEEVLVRDVLYACQGIDGKYVKFNSEIDGYAV 226


>XP_017615941.1 PREDICTED: gamma-tubulin complex component 3 [Gossypium arboreum]
           KHG03819.1 Gamma-tubulin complex component 3 [Gossypium
           arboreum]
          Length = 851

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 22/43 (51%), Positives = 35/43 (81%)
 Frame = +3

Query: 261 ICQEVSEVIRSALVRDVLYACRGVDGQFMKFFTDLDGYAIPEN 389
           + +E +EV    LVRDVLYAC+G+DG+++KF ++LDGYA+ ++
Sbjct: 180 LVEEENEVTEEVLVRDVLYACQGIDGKYVKFDSNLDGYALSDS 222


>XP_016738670.1 PREDICTED: gamma-tubulin complex component 3-like [Gossypium
           hirsutum]
          Length = 860

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 22/43 (51%), Positives = 35/43 (81%)
 Frame = +3

Query: 261 ICQEVSEVIRSALVRDVLYACRGVDGQFMKFFTDLDGYAIPEN 389
           + +E +EV    LVRDVLYAC+G+DG+++KF ++LDGYA+ ++
Sbjct: 180 LVEEENEVTEEVLVRDVLYACQGIDGKYVKFDSNLDGYALSDS 222


>XP_019165844.1 PREDICTED: gamma-tubulin complex component 3 isoform X2 [Ipomoea
           nil]
          Length = 827

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 21/42 (50%), Positives = 33/42 (78%)
 Frame = +3

Query: 261 ICQEVSEVIRSALVRDVLYACRGVDGQFMKFFTDLDGYAIPE 386
           + +E +EV    LVRD+LYAC+G+DG+++KF T+ DGY +P+
Sbjct: 254 LLKEENEVSEEVLVRDILYACQGIDGKYVKFDTNADGYVLPD 295


>XP_006289455.1 hypothetical protein CARUB_v10002970mg [Capsella rubella]
           EOA22353.1 hypothetical protein CARUB_v10002970mg
           [Capsella rubella]
          Length = 838

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 21/43 (48%), Positives = 35/43 (81%)
 Frame = +3

Query: 261 ICQEVSEVIRSALVRDVLYACRGVDGQFMKFFTDLDGYAIPEN 389
           + +E +EV    LVRDVLYAC+G+DG+++KF +++DGYA+ ++
Sbjct: 177 LVKEENEVTEEVLVRDVLYACQGIDGKYVKFNSEIDGYAVQDS 219


>XP_002532346.1 PREDICTED: gamma-tubulin complex component 3 [Ricinus communis]
           EEF30048.1 gamma-tubulin complex component, putative
           [Ricinus communis]
          Length = 855

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 22/43 (51%), Positives = 33/43 (76%)
 Frame = +3

Query: 261 ICQEVSEVIRSALVRDVLYACRGVDGQFMKFFTDLDGYAIPEN 389
           + +E SEV    LVRDVLYAC+G+DG+++KF  ++DGY + +N
Sbjct: 183 LVKEESEVTEEVLVRDVLYACQGIDGRYVKFDANIDGYVLMDN 225


>XP_019165843.1 PREDICTED: gamma-tubulin complex component 3 isoform X1 [Ipomoea
           nil]
          Length = 931

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 21/42 (50%), Positives = 33/42 (78%)
 Frame = +3

Query: 261 ICQEVSEVIRSALVRDVLYACRGVDGQFMKFFTDLDGYAIPE 386
           + +E +EV    LVRD+LYAC+G+DG+++KF T+ DGY +P+
Sbjct: 254 LLKEENEVSEEVLVRDILYACQGIDGKYVKFDTNADGYVLPD 295


>XP_002964155.1 hypothetical protein SELMODRAFT_438859 [Selaginella moellendorffii]
           EFJ34488.1 hypothetical protein SELMODRAFT_438859
           [Selaginella moellendorffii]
          Length = 850

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 22/44 (50%), Positives = 34/44 (77%)
 Frame = +3

Query: 258 EICQEVSEVIRSALVRDVLYACRGVDGQFMKFFTDLDGYAIPEN 389
           ++ QE  E+  +ALVRDVLYAC+G+DG++++F  + DGY + EN
Sbjct: 189 DLTQESFELSEAALVRDVLYACQGIDGRYVRFDKEADGYIVDEN 232


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