BLASTX nr result
ID: Ephedra29_contig00021496
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra29_contig00021496 (330 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJP06347.1 RDR6 [Pinus tabuliformis] 145 4e-38 XP_009758053.1 PREDICTED: RNA-dependent RNA polymerase 6 [Nicoti... 137 3e-35 XP_016477231.1 PREDICTED: RNA-dependent RNA polymerase 6 [Nicoti... 135 7e-35 NP_001312583.1 RNA-dependent RNA polymerase 6 [Nicotiana tabacum... 135 7e-35 XP_013615647.1 PREDICTED: RNA-dependent RNA polymerase 6-like, p... 130 1e-34 XP_019260524.1 PREDICTED: RNA-dependent RNA polymerase 6 [Nicoti... 134 2e-34 AAU21242.1 putative RNA-dependent RNA polymerase SDE1 [Nicotiana... 134 2e-34 CAR47810.1 RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 134 2e-34 ACA13601.1 RNA-dependent RNA polymerase [Nicotiana attenuata] 134 2e-34 XP_009616479.1 PREDICTED: RNA-dependent RNA polymerase 6, partia... 133 5e-34 ACO72600.1 RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] 133 5e-34 ADI52625.1 RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 133 5e-34 XP_006346784.1 PREDICTED: RNA-dependent RNA polymerase 6-like [S... 133 6e-34 CDY55599.1 BnaC01g42570D, partial [Brassica napus] 130 7e-34 CDY68449.1 BnaAnng27300D, partial [Brassica napus] 130 9e-34 KQK20564.1 hypothetical protein BRADI_1g55350 [Brachypodium dist... 132 1e-33 XP_003561343.1 PREDICTED: probable RNA-dependent RNA polymerase ... 132 1e-33 XP_004968861.1 PREDICTED: probable RNA-dependent RNA polymerase ... 132 1e-33 XP_010048973.1 PREDICTED: RNA-dependent RNA polymerase 6 [Eucaly... 132 2e-33 XP_010921974.1 PREDICTED: probable RNA-dependent RNA polymerase ... 131 2e-33 >AJP06347.1 RDR6 [Pinus tabuliformis] Length = 1189 Score = 145 bits (365), Expect = 4e-38 Identities = 69/106 (65%), Positives = 82/106 (77%) Frame = +3 Query: 12 SAHRTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMG 191 +A+RTA+F RVK IL +GF+LCGR Y FLAFS NQLRD SAWFFA+G+ IT I+ WMG Sbjct: 472 TAYRTAIFKRVKQILHKGFQLCGRYYLFLAFSANQLRDRSAWFFASGEDITVQQIKKWMG 531 Query: 192 KFQKITNVAKHAARMGQCFSSTYSTVDVGRRQFREIEDIERNGYTF 329 F K NVAKHAARMGQCFSSTY TV+V +Q ++ DI+R GY F Sbjct: 532 NFPKY-NVAKHAARMGQCFSSTYCTVEVPSKQVEDLPDIKRKGYDF 576 >XP_009758053.1 PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana sylvestris] Length = 1197 Score = 137 bits (344), Expect = 3e-35 Identities = 71/104 (68%), Positives = 78/104 (75%), Gaps = 1/104 (0%) Frame = +3 Query: 21 RTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGKFQ 200 RTA+F RVK ILSRGF LCGR+YSFLAFS NQLRD SAWFFA I I SWMG+F Sbjct: 484 RTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFS 543 Query: 201 KITNVAKHAARMGQCFSSTYSTVDVGRRQFR-EIEDIERNGYTF 329 NVAK AARMGQCFSSTY+TV+V R+ E+ DIERNGY F Sbjct: 544 N-RNVAKCAARMGQCFSSTYATVEVPSREVNSELPDIERNGYVF 586 >XP_016477231.1 PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana tabacum] Length = 1197 Score = 135 bits (341), Expect = 7e-35 Identities = 70/104 (67%), Positives = 78/104 (75%), Gaps = 1/104 (0%) Frame = +3 Query: 21 RTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGKFQ 200 RTA+F RVK ILS+GF LCGR+YSFLAFS NQLRD SAWFFA I I SWMG+F Sbjct: 484 RTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFS 543 Query: 201 KITNVAKHAARMGQCFSSTYSTVDVGRRQFR-EIEDIERNGYTF 329 NVAK AARMGQCFSSTY+TV+V R+ E+ DIERNGY F Sbjct: 544 N-RNVAKCAARMGQCFSSTYATVEVPSREVNSELPDIERNGYVF 586 >NP_001312583.1 RNA-dependent RNA polymerase 6 [Nicotiana tabacum] BAF96019.1 RNA-dependent RNA polymerase 6 [Nicotiana tabacum] Length = 1197 Score = 135 bits (341), Expect = 7e-35 Identities = 70/104 (67%), Positives = 78/104 (75%), Gaps = 1/104 (0%) Frame = +3 Query: 21 RTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGKFQ 200 RTA+F RVK ILS+GF LCGR+YSFLAFS NQLRD SAWFFA I I SWMG+F Sbjct: 484 RTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFS 543 Query: 201 KITNVAKHAARMGQCFSSTYSTVDVGRRQFR-EIEDIERNGYTF 329 NVAK AARMGQCFSSTY+TV+V R+ E+ DIERNGY F Sbjct: 544 N-RNVAKCAARMGQCFSSTYATVEVPSREVNSELPDIERNGYVF 586 >XP_013615647.1 PREDICTED: RNA-dependent RNA polymerase 6-like, partial [Brassica oleracea var. oleracea] Length = 316 Score = 130 bits (326), Expect = 1e-34 Identities = 68/106 (64%), Positives = 80/106 (75%), Gaps = 1/106 (0%) Frame = +3 Query: 15 AHRTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGK 194 + +T VF RVK IL+ GF+LCGRRYSFLAFS NQLRD SAWFFA ++I++WMGK Sbjct: 39 SQKTHVFKRVKTILTDGFKLCGRRYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGK 98 Query: 195 FQKITNVAKHAARMGQCFSSTYSTVDVGRRQF-REIEDIERNGYTF 329 F K NVAK AARMG CFSSTY+TVDV + E+ +IERNGYTF Sbjct: 99 F-KDKNVAKCAARMGLCFSSTYATVDVMPHEVDTELPEIERNGYTF 143 >XP_019260524.1 PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana attenuata] OIT39130.1 rna-dependent rna polymerase 6 [Nicotiana attenuata] Length = 1197 Score = 134 bits (338), Expect = 2e-34 Identities = 70/104 (67%), Positives = 77/104 (74%), Gaps = 1/104 (0%) Frame = +3 Query: 21 RTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGKFQ 200 RTA+F RVK ILSRGF LCGR+YSFLAFS NQLRD SAWFFA I I SWMG+F Sbjct: 484 RTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFS 543 Query: 201 KITNVAKHAARMGQCFSSTYSTVDVGRRQFR-EIEDIERNGYTF 329 NVAK AARMGQCFSSTY+TV+V + E+ DIERNGY F Sbjct: 544 N-RNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVF 586 >AAU21242.1 putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana] Length = 1197 Score = 134 bits (338), Expect = 2e-34 Identities = 70/104 (67%), Positives = 77/104 (74%), Gaps = 1/104 (0%) Frame = +3 Query: 21 RTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGKFQ 200 RTA+F RVK ILSRGF LCGR+YSFLAFS NQLRD SAWFFA I I SWMG+F Sbjct: 484 RTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFS 543 Query: 201 KITNVAKHAARMGQCFSSTYSTVDVGRRQFR-EIEDIERNGYTF 329 NVAK AARMGQCFSSTY+TV+V + E+ DIERNGY F Sbjct: 544 N-RNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVF 586 >CAR47810.1 RNA-dependent RNA polymerase 6 [Nicotiana tabacum] Length = 1197 Score = 134 bits (338), Expect = 2e-34 Identities = 70/104 (67%), Positives = 77/104 (74%), Gaps = 1/104 (0%) Frame = +3 Query: 21 RTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGKFQ 200 RTA+F RVK ILSRGF LCGR+YSFLAFS NQLRD SAWFFA I I SWMG+F Sbjct: 484 RTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFS 543 Query: 201 KITNVAKHAARMGQCFSSTYSTVDVGRRQFR-EIEDIERNGYTF 329 NVAK AARMGQCFSSTY+TV+V + E+ DIERNGY F Sbjct: 544 N-RNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVF 586 >ACA13601.1 RNA-dependent RNA polymerase [Nicotiana attenuata] Length = 1197 Score = 134 bits (338), Expect = 2e-34 Identities = 70/104 (67%), Positives = 77/104 (74%), Gaps = 1/104 (0%) Frame = +3 Query: 21 RTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGKFQ 200 RTA+F RVK ILSRGF LCGR+YSFLAFS NQLRD SAWFFA I I SWMG+F Sbjct: 484 RTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFS 543 Query: 201 KITNVAKHAARMGQCFSSTYSTVDVGRRQFR-EIEDIERNGYTF 329 NVAK AARMGQCFSSTY+TV+V + E+ DIERNGY F Sbjct: 544 N-RNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVF 586 >XP_009616479.1 PREDICTED: RNA-dependent RNA polymerase 6, partial [Nicotiana tomentosiformis] Length = 956 Score = 133 bits (335), Expect = 5e-34 Identities = 69/104 (66%), Positives = 77/104 (74%), Gaps = 1/104 (0%) Frame = +3 Query: 21 RTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGKFQ 200 RTA+F RVK ILS+GF LCGR+YSFLAFS NQLRD SAWFFA I I SWMG+F Sbjct: 243 RTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFS 302 Query: 201 KITNVAKHAARMGQCFSSTYSTVDVGRRQFR-EIEDIERNGYTF 329 NVAK AARMGQCFSSTY+TV+V + E+ DIERNGY F Sbjct: 303 N-RNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVF 345 >ACO72600.1 RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] Length = 1197 Score = 133 bits (335), Expect = 5e-34 Identities = 69/104 (66%), Positives = 77/104 (74%), Gaps = 1/104 (0%) Frame = +3 Query: 21 RTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGKFQ 200 RTA+F RVK ILS+GF LCGR+YSFLAFS NQLRD SAWFFA I I SWMG+F Sbjct: 484 RTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFS 543 Query: 201 KITNVAKHAARMGQCFSSTYSTVDVGRRQFR-EIEDIERNGYTF 329 NVAK AARMGQCFSSTY+TV+V + E+ DIERNGY F Sbjct: 544 N-RNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVF 586 >ADI52625.1 RNA-dependent RNA polymerase 6 [Nicotiana tabacum] Length = 1197 Score = 133 bits (335), Expect = 5e-34 Identities = 69/104 (66%), Positives = 77/104 (74%), Gaps = 1/104 (0%) Frame = +3 Query: 21 RTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGKFQ 200 RTA+F RVK ILS+GF LCGR+YSFLAFS NQLRD SAWFFA I I SWMG+F Sbjct: 484 RTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFS 543 Query: 201 KITNVAKHAARMGQCFSSTYSTVDVGRRQFR-EIEDIERNGYTF 329 NVAK AARMGQCFSSTY+TV+V + E+ DIERNGY F Sbjct: 544 N-RNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVF 586 >XP_006346784.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Solanum tuberosum] XP_006346785.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Solanum tuberosum] Length = 1198 Score = 133 bits (334), Expect = 6e-34 Identities = 70/104 (67%), Positives = 77/104 (74%), Gaps = 1/104 (0%) Frame = +3 Query: 21 RTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGKFQ 200 RT +F RVK ILS+GF LCGRRYSFLAFS NQLRD SAWFFA I NI +WMGKF Sbjct: 485 RTGIFQRVKSILSKGFYLCGRRYSFLAFSANQLRDRSAWFFAEAPEIRVPNIINWMGKFG 544 Query: 201 KITNVAKHAARMGQCFSSTYSTVDVGRRQFR-EIEDIERNGYTF 329 NVAK AARMGQCFSSTY+TV+V + E+ DIERNGY F Sbjct: 545 N-RNVAKCAARMGQCFSSTYATVEVLPSEVNSELPDIERNGYVF 587 >CDY55599.1 BnaC01g42570D, partial [Brassica napus] Length = 417 Score = 130 bits (326), Expect = 7e-34 Identities = 68/106 (64%), Positives = 80/106 (75%), Gaps = 1/106 (0%) Frame = +3 Query: 15 AHRTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGK 194 + +T VF RVK IL+ GF+LCGRRYSFLAFS NQLRD SAWFFA ++I++WMGK Sbjct: 26 SQKTHVFKRVKTILTDGFKLCGRRYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGK 85 Query: 195 FQKITNVAKHAARMGQCFSSTYSTVDVGRRQF-REIEDIERNGYTF 329 F K NVAK AARMG CFSSTY+TVDV + E+ +IERNGYTF Sbjct: 86 F-KDKNVAKCAARMGLCFSSTYATVDVMPHEVDTELPEIERNGYTF 130 >CDY68449.1 BnaAnng27300D, partial [Brassica napus] Length = 432 Score = 130 bits (326), Expect = 9e-34 Identities = 68/106 (64%), Positives = 80/106 (75%), Gaps = 1/106 (0%) Frame = +3 Query: 15 AHRTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGK 194 + +T VF RVK IL+ GF+LCGRRYSFLAFS NQLRD SAWFFA ++I++WMGK Sbjct: 26 SQKTHVFKRVKTILTDGFKLCGRRYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGK 85 Query: 195 FQKITNVAKHAARMGQCFSSTYSTVDVGRRQF-REIEDIERNGYTF 329 F K NVAK AARMG CFSSTY+TVDV + E+ +IERNGYTF Sbjct: 86 F-KDKNVAKCAARMGLCFSSTYATVDVMPHEVDTELPEIERNGYTF 130 >KQK20564.1 hypothetical protein BRADI_1g55350 [Brachypodium distachyon] Length = 963 Score = 132 bits (332), Expect = 1e-33 Identities = 66/104 (63%), Positives = 77/104 (74%), Gaps = 1/104 (0%) Frame = +3 Query: 21 RTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGKFQ 200 +TAV+ RVK L+ GF +CGR+YSFLAFS NQLRD SAWFFA T +IR WMG+F Sbjct: 499 KTAVYKRVKMFLTEGFHMCGRKYSFLAFSSNQLRDRSAWFFAEDSKTTVESIRKWMGRFT 558 Query: 201 KITNVAKHAARMGQCFSSTYSTVDVGRRQFRE-IEDIERNGYTF 329 NVAKHAARMGQCFSSTY+TV V + E +ED+ERN YTF Sbjct: 559 S-KNVAKHAARMGQCFSSTYATVMVKPDEVNESLEDVERNNYTF 601 >XP_003561343.1 PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Brachypodium distachyon] KQK20559.1 hypothetical protein BRADI_1g55350 [Brachypodium distachyon] KQK20560.1 hypothetical protein BRADI_1g55350 [Brachypodium distachyon] KQK20561.1 hypothetical protein BRADI_1g55350 [Brachypodium distachyon] KQK20562.1 hypothetical protein BRADI_1g55350 [Brachypodium distachyon] KQK20563.1 hypothetical protein BRADI_1g55350 [Brachypodium distachyon] Length = 1208 Score = 132 bits (332), Expect = 1e-33 Identities = 66/104 (63%), Positives = 77/104 (74%), Gaps = 1/104 (0%) Frame = +3 Query: 21 RTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGKFQ 200 +TAV+ RVK L+ GF +CGR+YSFLAFS NQLRD SAWFFA T +IR WMG+F Sbjct: 499 KTAVYKRVKMFLTEGFHMCGRKYSFLAFSSNQLRDRSAWFFAEDSKTTVESIRKWMGRFT 558 Query: 201 KITNVAKHAARMGQCFSSTYSTVDVGRRQFRE-IEDIERNGYTF 329 NVAKHAARMGQCFSSTY+TV V + E +ED+ERN YTF Sbjct: 559 S-KNVAKHAARMGQCFSSTYATVMVKPDEVNESLEDVERNNYTF 601 >XP_004968861.1 PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Setaria italica] KQL05367.1 hypothetical protein SETIT_000086mg [Setaria italica] Length = 1211 Score = 132 bits (332), Expect = 1e-33 Identities = 65/105 (61%), Positives = 77/105 (73%), Gaps = 1/105 (0%) Frame = +3 Query: 18 HRTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGKF 197 H+T V+ RVK L+ GF +CGR+YSFLAFS NQLRD SAWFFA T +IR WMG+F Sbjct: 499 HKTTVYKRVKTFLTEGFHMCGRKYSFLAFSSNQLRDRSAWFFAEDRTRTVESIRKWMGRF 558 Query: 198 QKITNVAKHAARMGQCFSSTYSTVDVGRRQFRE-IEDIERNGYTF 329 NVAKHAARMGQCFSSTY+TV + + E +ED+ERNGY F Sbjct: 559 TS-KNVAKHAARMGQCFSSTYATVVMQPDEVNECLEDVERNGYVF 602 >XP_010048973.1 PREDICTED: RNA-dependent RNA polymerase 6 [Eucalyptus grandis] KCW81403.1 hypothetical protein EUGRSUZ_C02780 [Eucalyptus grandis] Length = 1195 Score = 132 bits (331), Expect = 2e-33 Identities = 65/106 (61%), Positives = 79/106 (74%), Gaps = 1/106 (0%) Frame = +3 Query: 15 AHRTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGK 194 + +T +F RV+ I++ GF LCGR+YSFLAFS NQLRD SAWFFA I N IR+WMGK Sbjct: 481 SQKTKIFKRVRMIMTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKAINVNKIRAWMGK 540 Query: 195 FQKITNVAKHAARMGQCFSSTYSTVDVGRRQ-FREIEDIERNGYTF 329 F NVAK ARMGQCFSSTY+TV+V R++ ++ DIERNGY F Sbjct: 541 FNN-RNVAKCTARMGQCFSSTYATVEVPRKEVHHDLPDIERNGYCF 585 >XP_010921974.1 PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis guineensis] XP_019706451.1 PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis guineensis] XP_019706452.1 PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis guineensis] Length = 1198 Score = 131 bits (330), Expect = 2e-33 Identities = 69/104 (66%), Positives = 76/104 (73%), Gaps = 1/104 (0%) Frame = +3 Query: 21 RTAVFSRVKDILSRGFELCGRRYSFLAFSPNQLRDHSAWFFANGDGITANNIRSWMGKFQ 200 +T VF RV++IL GF LCGRRYSFLAFS NQLRD SAWFFA + IR+WMGKF Sbjct: 487 KTTVFRRVRNILLDGFHLCGRRYSFLAFSSNQLRDRSAWFFAEDSNTSVMAIRNWMGKFA 546 Query: 201 KITNVAKHAARMGQCFSSTYSTVDVGRRQFRE-IEDIERNGYTF 329 NVAK AARMGQCFSSTY+TVDV QF + DIERNGY F Sbjct: 547 N-KNVAKCAARMGQCFSSTYATVDVPLDQFNPLLPDIERNGYVF 589