BLASTX nr result

ID: Ephedra29_contig00021233 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00021233
         (1408 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABK25399.1 unknown [Picea sitchensis]                                 119   3e-27

>ABK25399.1 unknown [Picea sitchensis]
          Length = 232

 Score =  119 bits (297), Expect = 3e-27
 Identities = 86/280 (30%), Positives = 142/280 (50%)
 Frame = -2

Query: 1293 EGGTDLNGELRRDVDDHCNARIFSMVGPPKPDTDSSILSYKLQLANNSVSQLQNSVLESQ 1114
            E G D NGEL  ++++H NA+I+SM+GP       S L+++L+LA+ S+ +L+  V    
Sbjct: 4    ERGEDRNGELSSELNNHSNAQIYSMIGPSTSQV--SALTFQLELAHRSIRKLEEQV---- 57

Query: 1113 RCITALHHRIDHLEFQLRLLTDKFSKAKNEASQNAAATKRYVAISEELRQECEKLHHERE 934
               ++L  ++   + QL+L T++ +KA++EA+QNA   K+++AI EELR ECE    +R+
Sbjct: 58   ---SSLQQQLSEKDDQLKLTTERHAKARDEATQNALVLKKHIAICEELRNECEHFRRDRD 114

Query: 933  ALERRIVEAEEQKDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRLAEVENLRYSXXX 754
            A E +IVEA EQ++L                              KR  E E        
Sbjct: 115  AFEEQIVEAHEQREL----------------------------AEKRATEAE-------- 138

Query: 753  XXXXXXXXXXXXXXRVEENVLGSPKNNSDLRKRNGYLEEVLPLGISNQVAVSSESKLVSQ 574
                          R+E+ +  S   N + ++ NGYLEE+LP  I+N+   +   K  +Q
Sbjct: 139  ------IREKMAQRRLEKALQVSSMTNLERKR-NGYLEEMLPNCINNERVGALRGKPQTQ 191

Query: 573  RHSKKRPASNLTAVDSNVTSPENQVDKLTSQQGAPQENAK 454
            R  +K+ A+ L  V S+   PE Q++     Q  P++ ++
Sbjct: 192  RVMRKKIAAPLAPVASSGLIPEGQLEDECFGQPTPKKESQ 231


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