BLASTX nr result

ID: Ephedra29_contig00021093 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00021093
         (1514 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABR18094.1 unknown [Picea sitchensis]                                  76   5e-11

>ABR18094.1 unknown [Picea sitchensis]
          Length = 510

 Score = 75.9 bits (185), Expect = 5e-11
 Identities = 73/230 (31%), Positives = 104/230 (45%), Gaps = 35/230 (15%)
 Frame = +1

Query: 394 GWQSPTRISFSVDLSYNDKLSPDLRKN--INDNINVITEPSEFEFSMIPGAQSCPPKTQI 567
           GWQSP RISF  D+   D++SP+ RK   I DN +     +EFEF M+  A +     Q 
Sbjct: 18  GWQSP-RISFCHDIP-GDRVSPEKRKREEIIDNYS-----TEFEFCMVQNATNPTFLDQG 70

Query: 568 ILSADQLFGNGKILPRLSPPVFEKNPTQD-VPEQITNPFEQVQEELKP-----SPAISIA 729
           ++SAD+LF +GK+LP   PP        D  PE + N    V  E +P     + +I++ 
Sbjct: 71  MISADELFLDGKLLPLHIPPQIPLQEMDDATPEDLENTTHAVSAEPEPEVKAETQSINVV 130

Query: 730 R-------HXXXXXXXXXXXXYPGSSKNQKKWKEMFK------IPTKDS----------- 837
           +                     P S K   +WKE+FK      + +KDS           
Sbjct: 131 QDVSLENVQSSADSGSNTIPVSPKSPKLSHRWKEIFKLGKLQVVTSKDSECQEIKKGEKK 190

Query: 838 ---NPEPNLSRVQSQKSVWRFTRSCSSGSEARFNNGGLLCSLPFTRSYSA 978
              N   +L +  S +S+W FTRS S+G     +     CSL  +RS SA
Sbjct: 191 ESHNHGFSLKQPLSPRSIWPFTRSSSAGDAKAASTS---CSLASSRSNSA 237


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