BLASTX nr result

ID: Ephedra29_contig00020845 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00020845
         (687 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ERN04758.1 hypothetical protein AMTR_s00140p00029580 [Amborella ...    59   2e-06
XP_006843083.2 PREDICTED: uncharacterized protein LOC18432921 [A...    59   2e-06

>ERN04758.1 hypothetical protein AMTR_s00140p00029580 [Amborella trichopoda]
          Length = 1205

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 1/222 (0%)
 Frame = +2

Query: 14  LNENNKGVHFQSRDGSFEKCRPEEKNVSLETESKDIIANTLNDSNNGVNFQSLDSSFEKC 193
           L+E   G+  +  DG  EK  P+  N  +    +D++A   ND        S    FE  
Sbjct: 325 LSECEDGIARRQNDG--EKTEPQILNSKI---CEDVVARP-NDVEKSETSISNSEIFEDG 378

Query: 194 GPSSNLHRDSLTEDNNAPCSSGFYETEAS-KGELNTGLSENKSTDGNVVTILGRTLRSKV 370
               N      T++     S G  + ++  +GE    +S   + +   + +L  +     
Sbjct: 379 VSRENDVVAFETKNCVVQQSEGAMDLDSGIQGEEVENVSRTPANESKSIILLNDSKDEVG 438

Query: 371 NKTNAALFKQAPNIESMQKDVSVSKNQTLFNSTKIKLRINMSPESNVTEIPXXXXXXXXX 550
              +  +   AP         S   + +L +S + KL + MS +  +T+ P         
Sbjct: 439 TSMDREMSSDAPGS-------STKASSSLRSSARKKLELKMSKKIALTKFPSNARELLAT 491

Query: 551 XXXDGCFVRYIDRGEKVRLTGIIQRCGILCHCQLCKGEKVIS 676
              +GC V YI RG+  RL G I+  GILC+C  C G K+++
Sbjct: 492 GLLEGCTVHYIFRGKGERLRGTIKEGGILCYCSSCNGNKIVN 533


>XP_006843083.2 PREDICTED: uncharacterized protein LOC18432921 [Amborella
           trichopoda]
          Length = 1210

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 1/222 (0%)
 Frame = +2

Query: 14  LNENNKGVHFQSRDGSFEKCRPEEKNVSLETESKDIIANTLNDSNNGVNFQSLDSSFEKC 193
           L+E   G+  +  DG  EK  P+  N  +    +D++A   ND        S    FE  
Sbjct: 330 LSECEDGIARRQNDG--EKTEPQILNSKI---CEDVVARP-NDVEKSETSISNSEIFEDG 383

Query: 194 GPSSNLHRDSLTEDNNAPCSSGFYETEAS-KGELNTGLSENKSTDGNVVTILGRTLRSKV 370
               N      T++     S G  + ++  +GE    +S   + +   + +L  +     
Sbjct: 384 VSRENDVVAFETKNCVVQQSEGAMDLDSGIQGEEVENVSRTPANESKSIILLNDSKDEVG 443

Query: 371 NKTNAALFKQAPNIESMQKDVSVSKNQTLFNSTKIKLRINMSPESNVTEIPXXXXXXXXX 550
              +  +   AP         S   + +L +S + KL + MS +  +T+ P         
Sbjct: 444 TSMDREMSSDAPGS-------STKASSSLRSSARKKLELKMSKKIALTKFPSNARELLAT 496

Query: 551 XXXDGCFVRYIDRGEKVRLTGIIQRCGILCHCQLCKGEKVIS 676
              +GC V YI RG+  RL G I+  GILC+C  C G K+++
Sbjct: 497 GLLEGCTVHYIFRGKGERLRGTIKEGGILCYCSSCNGNKIVN 538


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