BLASTX nr result
ID: Ephedra29_contig00020814
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra29_contig00020814 (782 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJA90770.1 RNA-dependent RNA polymerase 2 [Ephedra trifurca] 261 6e-77 AJP06346.1 RDR2 [Pinus tabuliformis] 239 8e-69 AJA90786.1 RNA-dependent RNA polymerase 2 [Pinus canariensis] 235 2e-67 AJA90778.1 RNA-dependent RNA polymerase 2 [Ginkgo biloba] 219 1e-61 AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta] 214 6e-60 XP_004953848.1 PREDICTED: probable RNA-dependent RNA polymerase ... 192 3e-52 EMT03978.1 Putative RNA-dependent RNA polymerase 1 [Aegilops tau... 189 3e-51 XP_020170070.1 probable RNA-dependent RNA polymerase 1 [Aegilops... 189 3e-51 XP_006306626.1 hypothetical protein CARUB_v10008144mg [Capsella ... 188 9e-51 XP_008812977.1 PREDICTED: probable RNA-dependent RNA polymerase ... 188 1e-50 XP_020090854.1 probable RNA-dependent RNA polymerase 1 [Ananas c... 187 2e-50 OAY79234.1 RNA-dependent RNA polymerase 1, partial [Ananas comosus] 186 4e-50 XP_017970690.1 PREDICTED: RNA-dependent RNA polymerase 1 [Theobr... 186 4e-50 EOY01384.1 RNA-dependent RNA polymerase 1 isoform 1 [Theobroma c... 186 4e-50 XP_018501948.1 PREDICTED: probable RNA-dependent RNA polymerase ... 185 8e-50 CCD74482.1 RNA-dependent RNA polymerase 1 [Arabidopsis halleri s... 185 8e-50 XP_009351560.1 PREDICTED: probable RNA-dependent RNA polymerase ... 185 8e-50 XP_008381757.1 PREDICTED: probable RNA-dependent RNA polymerase ... 185 8e-50 XP_002892830.1 RNA-dependent RNA polymerase 1 [Arabidopsis lyrat... 184 2e-49 XP_020089659.1 probable RNA-dependent RNA polymerase 1 [Ananas c... 184 2e-49 >AJA90770.1 RNA-dependent RNA polymerase 2 [Ephedra trifurca] Length = 1111 Score = 261 bits (668), Expect = 6e-77 Identities = 135/262 (51%), Positives = 182/262 (69%), Gaps = 2/262 (0%) Frame = -3 Query: 780 ILSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQA 601 ILSAP LT EFF +L +N SP H+NIALSE+ + + CL+P+ L+ Sbjct: 294 ILSAPTLTSEFFDVLTNHNYSPLHINIALSELFKSMTTCLQPNRWLQ------------- 340 Query: 600 SKRFKSRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHF 421 SRLY L N + KQ + V K +M+FY+ +VTPSK+Y IGPEL RSNRVTRHF Sbjct: 341 -----SRLYELKNTNPKQLNSLIVSPSKDLMQFYRVLVTPSKVYFIGPELNRSNRVTRHF 395 Query: 420 SKNIEDFVKVTFVDEDYEKLHFSELTVK--TEKGSSGALKGSKIHDRILTTLKDGLVIHN 247 S + DF++V+FVDED +LH + LTVK TE+ + +++RI+ L +G+ I+N Sbjct: 396 SDHASDFIRVSFVDEDLGRLHANALTVKLKTEQDILERPCRTNVYERIIAILNNGIFINN 455 Query: 246 KKFDFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSW 67 K+F+FLAFS+SQLRENSVW+F+S+K +T+ HIR WMGNFE+I+NVA Y+AR+GQSFS SW Sbjct: 456 KRFEFLAFSSSQLRENSVWLFSSSKYLTAEHIRKWMGNFEDIRNVAKYAARMGQSFSSSW 515 Query: 66 ETFVVEKNECRTIEDIEVITDG 1 T +V+++E IEDIEV T G Sbjct: 516 GTEIVKEHEVHAIEDIEVTTKG 537 >AJP06346.1 RDR2 [Pinus tabuliformis] Length = 1123 Score = 239 bits (610), Expect = 8e-69 Identities = 126/260 (48%), Positives = 175/260 (67%) Frame = -3 Query: 780 ILSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQA 601 ILS P L+ EFF +LQ H+ +AL+E+ + K+ C EP L+ +L +L + Sbjct: 295 ILSGPTLSREFFDLLQNDKTPDLHIRLALAELHKFKTTCFEPEIWLRNQLNKLR----NS 350 Query: 600 SKRFKSRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHF 421 KR KS A + + +MKF++A+VTPSK+Y +GPEL SNRVTRHF Sbjct: 351 EKRLKS---------------ATISTDRAIMKFHRALVTPSKVYFLGPELNVSNRVTRHF 395 Query: 420 SKNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIHNKK 241 ++ I+DF++V+FVDED+ KLH + LT K E G + +K++DRIL+ LKDG+V+ KK Sbjct: 396 AEYIDDFLRVSFVDEDWNKLHSNALTSKLEYGFLAKRQRTKVYDRILSILKDGIVVGKKK 455 Query: 240 FDFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWET 61 F+FLAFSASQLRENS+WMF+ +VT+ IR WMG+F+NI+NVA +AR+GQSFS S +T Sbjct: 456 FEFLAFSASQLRENSLWMFSPNDKVTADSIRKWMGDFDNIRNVAKCAARMGQSFSSSRQT 515 Query: 60 FVVEKNECRTIEDIEVITDG 1 V+++E I DIEV TDG Sbjct: 516 SNVQEHEVLIIPDIEVSTDG 535 >AJA90786.1 RNA-dependent RNA polymerase 2 [Pinus canariensis] Length = 1114 Score = 235 bits (600), Expect = 2e-67 Identities = 123/260 (47%), Positives = 173/260 (66%) Frame = -3 Query: 780 ILSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQA 601 ILS P L+ EFF +LQ H+ +AL+E+ + K+ C EP L+ +L +L + Sbjct: 295 ILSGPTLSREFFDLLQNDKTPDLHIRLALAELHKFKTTCFEPEIWLRNQLNKLRNSE--- 351 Query: 600 SKRFKSRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHF 421 KQ A + + +MKF++A+VTPSK+Y +GPEL SNRVTRHF Sbjct: 352 ----------------KQLKSATISTDRAIMKFHRALVTPSKVYFLGPELNVSNRVTRHF 395 Query: 420 SKNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIHNKK 241 ++ I+DF++V+FVDED+ KLH + LT K E G + +K+++RIL+ LKDG+V+ KK Sbjct: 396 AEYIDDFLRVSFVDEDWNKLHSNALTSKLEYGFLAKPQRTKVYNRILSILKDGIVVGKKK 455 Query: 240 FDFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWET 61 F+FLAFSASQLRENS+WMF+ +VT+ IR WMG+F+NI+NVA +AR+GQSFS S +T Sbjct: 456 FEFLAFSASQLRENSLWMFSPNDKVTADSIRKWMGDFDNIRNVAKCAARMGQSFSSSRQT 515 Query: 60 FVVEKNECRTIEDIEVITDG 1 V+++E I DIEV TDG Sbjct: 516 SNVQEHEVLIIPDIEVSTDG 535 >AJA90778.1 RNA-dependent RNA polymerase 2 [Ginkgo biloba] Length = 1114 Score = 219 bits (558), Expect = 1e-61 Identities = 117/260 (45%), Positives = 168/260 (64%) Frame = -3 Query: 780 ILSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQA 601 ILS P L EF+ +L++ H N+AL+E+ +LK C EP L+ +L Sbjct: 300 ILSGPTLCQEFYDLLRSDRTPLVHTNLALTELHKLKDICFEPEIWLRNQL---------- 349 Query: 600 SKRFKSRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHF 421 N + + KQ AA+ +M F++ +VTPSK+Y +GPEL SN VTR F Sbjct: 350 ---------NKFRNERKQLKSAAISTDHGLMNFHRVLVTPSKVYFLGPELNVSNCVTRQF 400 Query: 420 SKNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIHNKK 241 + ++DF++V+FVDED+ KLH + L++KT+ G ++IH+RIL+ LK+G++I++K+ Sbjct: 401 ANYMDDFLRVSFVDEDWNKLHSTALSLKTDCGLLARPHKTEIHNRILSILKEGILINSKR 460 Query: 240 FDFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWET 61 F+FLAFSASQLRENSVWMFAS V++ IR WMG+F I+NVA ++R+GQSFS S +T Sbjct: 461 FEFLAFSASQLRENSVWMFASNNNVSADSIRKWMGDFCKIRNVAKCASRMGQSFSSSRKT 520 Query: 60 FVVEKNECRTIEDIEVITDG 1 V ++E I DIEV TDG Sbjct: 521 VNVREHEVLIIPDIEVSTDG 540 >AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta] Length = 1117 Score = 214 bits (545), Expect = 6e-60 Identities = 115/260 (44%), Positives = 164/260 (63%) Frame = -3 Query: 780 ILSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQA 601 ILS P L EFF +L+ H+N+AL+E+ +LK+ C EP L+ + Sbjct: 298 ILSLPTLCPEFFDLLRHDRTPLVHINLALTELHKLKATCFEPEKWLENQ----------- 346 Query: 600 SKRFKSRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHF 421 +N Q A V + +M F++ +VTP+K+Y +GPEL SN VTR + Sbjct: 347 --------FNKLQNKQTQLKSATVSRDHGLMNFHRVLVTPAKVYFLGPELNVSNCVTRQY 398 Query: 420 SKNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIHNKK 241 +K I+DF++V+FVDED+ KLH + L+VKTE G ++I+ RIL+ LK+G+VI NK+ Sbjct: 399 AKYIDDFLRVSFVDEDWNKLHSTALSVKTEYGLLAKPLRTEIYRRILSVLKEGIVIGNKR 458 Query: 240 FDFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWET 61 F+FLAFSASQLRENSVWMFAS +V+ IR WMG F N++N+A ++R+GQ FS S +T Sbjct: 459 FEFLAFSASQLRENSVWMFASNDKVSVDSIRKWMGEFCNMRNIAKCASRMGQCFSSSKQT 518 Query: 60 FVVEKNECRTIEDIEVITDG 1 V ++E I DIE+ +DG Sbjct: 519 ISVPEHEVLVIPDIEISSDG 538 >XP_004953848.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Setaria italica] KQL31415.1 hypothetical protein SETIT_016153mg [Setaria italica] Length = 1123 Score = 192 bits (488), Expect = 3e-52 Identities = 114/259 (44%), Positives = 157/259 (60%) Frame = -3 Query: 777 LSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQAS 598 LS P L FF ++ + H+ AL +MS LKS CL P N L LQ S Sbjct: 300 LSGPTLDDNFFCLVSPKHVPIDHIKRALLKMSYLKSTCLNPTNWLA----------LQYS 349 Query: 597 KRFKSRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHFS 418 K KSR Y L + D V+ ++ VTP+K+Y GPE+ SNRV RHFS Sbjct: 350 KIRKSR-YALQRSSGISLDDGLVY-------VHRVQVTPAKVYFYGPEINVSNRVVRHFS 401 Query: 417 KNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIHNKKF 238 ++++F++++FVDED EKL +L+ ++ G+ + + +++R+L+ L +G+ I K F Sbjct: 402 ADLDNFLRISFVDEDCEKLRSVDLSPRSASGNDA--RRTALYNRVLSVLSNGISIGGKHF 459 Query: 237 DFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWETF 58 +FLAFS+SQLR+NS WMFAS +T+S IR WMG+F NI+NVA Y+ARLGQSFS S ET Sbjct: 460 EFLAFSSSQLRDNSAWMFASRPGLTASDIRKWMGDFRNIRNVAKYAARLGQSFSSSTETL 519 Query: 57 VVEKNECRTIEDIEVITDG 1 V + E I DI ITDG Sbjct: 520 KVPRYEVEEIPDITDITDG 538 >EMT03978.1 Putative RNA-dependent RNA polymerase 1 [Aegilops tauschii] Length = 1056 Score = 189 bits (481), Expect = 3e-51 Identities = 107/265 (40%), Positives = 162/265 (61%), Gaps = 5/265 (1%) Frame = -3 Query: 780 ILSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQA 601 ILS P L F++++ H+ AL MS LK CL P N L + E+ Q Sbjct: 274 ILSGPTLDDNFYRLVSPGYVCIDHIKRALENMSYLKKTCLNPTNWLSEQYKEI-----QR 328 Query: 600 SKRFKSRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHF 421 S+ Y L + + D V+ Y+ +TP+K+Y GPE+ SNRV R++ Sbjct: 329 SR------YMLTSPNISLDDDGLVY-------VYRVQITPAKVYFYGPEINVSNRVVRNY 375 Query: 420 SKNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIHNKK 241 + ++++F++++FVDED+EKL ++L+ ++ G++ + + +++RIL+ L +G+ I NK Sbjct: 376 ADDLDNFLRISFVDEDFEKLRSTDLSPRSAPGNNA--RRTALYNRILSVLSNGITIGNKH 433 Query: 240 FDFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWET 61 F+FLAFS+SQLR+NS WMFAS +++S IR WMGNF NI+NVA Y+ARLGQSFS S ET Sbjct: 434 FEFLAFSSSQLRDNSAWMFASHPGLSASDIREWMGNFRNIRNVAKYAARLGQSFSASTET 493 Query: 60 FVVEKNECRTIEDIE-----VITDG 1 V K E + I D++ V +DG Sbjct: 494 LKVHKYEVQVIPDVKNGTKYVFSDG 518 >XP_020170070.1 probable RNA-dependent RNA polymerase 1 [Aegilops tauschii subsp. tauschii] Length = 1120 Score = 189 bits (481), Expect = 3e-51 Identities = 107/265 (40%), Positives = 162/265 (61%), Gaps = 5/265 (1%) Frame = -3 Query: 780 ILSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQA 601 ILS P L F++++ H+ AL MS LK CL P N L + E+ Q Sbjct: 299 ILSGPTLDDNFYRLVSPGYVCIDHIKRALENMSYLKKTCLNPTNWLSEQYKEI-----QR 353 Query: 600 SKRFKSRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHF 421 S+ Y L + + D V+ Y+ +TP+K+Y GPE+ SNRV R++ Sbjct: 354 SR------YMLTSPNISLDDDGLVY-------VYRVQITPAKVYFYGPEINVSNRVVRNY 400 Query: 420 SKNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIHNKK 241 + ++++F++++FVDED+EKL ++L+ ++ G++ + + +++RIL+ L +G+ I NK Sbjct: 401 ADDLDNFLRISFVDEDFEKLRSTDLSPRSAPGNNA--RRTALYNRILSVLSNGITIGNKH 458 Query: 240 FDFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWET 61 F+FLAFS+SQLR+NS WMFAS +++S IR WMGNF NI+NVA Y+ARLGQSFS S ET Sbjct: 459 FEFLAFSSSQLRDNSAWMFASHPGLSASDIREWMGNFRNIRNVAKYAARLGQSFSASTET 518 Query: 60 FVVEKNECRTIEDIE-----VITDG 1 V K E + I D++ V +DG Sbjct: 519 LKVHKYEVQVIPDVKNGTKYVFSDG 543 >XP_006306626.1 hypothetical protein CARUB_v10008144mg [Capsella rubella] EOA39524.1 hypothetical protein CARUB_v10008144mg [Capsella rubella] Length = 1107 Score = 188 bits (477), Expect = 9e-51 Identities = 101/256 (39%), Positives = 152/256 (59%) Frame = -3 Query: 777 LSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQAS 598 L PAL EF+Q+L ++ +L ++ L C EP L+ Sbjct: 295 LPGPALDLEFYQLLNPKKYDRALIDHSLEKLFHLGECCYEPARWLREE------------ 342 Query: 597 KRFKSRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHFS 418 Y N+ K + ++ Y+ +VTP+++Y +GPE+ SNRV RH+S Sbjct: 343 -------YKKLNSSKKLPLSPTISLDDGLVYIYRVLVTPARVYFLGPEVNVSNRVLRHYS 395 Query: 417 KNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIHNKKF 238 + I +F++++FVDED EK+H +L+ + S + +K++DRI + L+DG+VI +KKF Sbjct: 396 EYINNFLRISFVDEDLEKIHSMDLSPR-----SSTQRRTKLYDRIYSVLRDGIVIGDKKF 450 Query: 237 DFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWETF 58 +FLAFS+SQLRENS WMFA +T++HIR WMG+F++I+NVA Y+ARLGQSFS S ET Sbjct: 451 EFLAFSSSQLRENSAWMFAPRDRLTAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETL 510 Query: 57 VVEKNECRTIEDIEVI 10 V +E I D+E + Sbjct: 511 NVRSDEIEVIPDVEAM 526 >XP_008812977.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Phoenix dactylifera] XP_008812978.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Phoenix dactylifera] Length = 1131 Score = 188 bits (477), Expect = 1e-50 Identities = 109/263 (41%), Positives = 159/263 (60%), Gaps = 4/263 (1%) Frame = -3 Query: 777 LSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQAS 598 L P L +FF ++ ++ A+ EM KS +P N L ++ +L Sbjct: 296 LFGPTLDGKFFGLVSPQFIRIDYIECAIEEMYHSKSSFFDPANWLTKKYLKL-------- 347 Query: 597 KRFKSRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHFS 418 R L + D V+ Y+ VTPSK+Y GPE+ SNRV RHFS Sbjct: 348 ----KRSLRLPKSPSISLDAGLVY-------VYRVQVTPSKVYFYGPEVNVSNRVVRHFS 396 Query: 417 KNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIHNKKF 238 ++IE+FV+V+FVDED+EK+H ++L+ ++ GS+G + ++ RIL+ L++G+ I +KKF Sbjct: 397 EDIENFVRVSFVDEDWEKMHSTDLSSRS--GSAGNEMHTALYRRILSVLRNGITIGDKKF 454 Query: 237 DFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWETF 58 +FLAFS+SQLRENS WMFAS + +T++ IR WMG+F I+NVA Y+ARLGQSFS S ET Sbjct: 455 EFLAFSSSQLRENSAWMFASNERLTAAAIRKWMGDFHEIRNVAKYAARLGQSFSSSTETL 514 Query: 57 VVEKNECRTIEDIE----VITDG 1 V+K++ I D+ V +DG Sbjct: 515 TVDKHDVDDIPDVRYGKYVFSDG 537 >XP_020090854.1 probable RNA-dependent RNA polymerase 1 [Ananas comosus] XP_020090855.1 probable RNA-dependent RNA polymerase 1 [Ananas comosus] XP_020090856.1 probable RNA-dependent RNA polymerase 1 [Ananas comosus] Length = 1133 Score = 187 bits (475), Expect = 2e-50 Identities = 104/254 (40%), Positives = 156/254 (61%) Frame = -3 Query: 780 ILSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQA 601 I+S P L EFF+++ Y ++ A+ +MS K CL+P N L Sbjct: 298 IISGPTLDDEFFRLVCPYLVPVDYIVHAIEKMSCFKKTCLDPANWL-------------- 343 Query: 600 SKRFKSRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHF 421 S+ Y Y ++ ++ ++ VTPSK+Y GPE+ SNRV R+F Sbjct: 344 -----SKQYLKYEQSDCPPKSPRIYLDDGLVYVHRVQVTPSKVYFCGPEVNVSNRVLRYF 398 Query: 420 SKNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIHNKK 241 S + +F++V+FVDED+EK++ ++L+ + SS + + ++ RIL+ L++G+ I NKK Sbjct: 399 SDEMNNFLRVSFVDEDWEKMYSTDLSPWSV--SSNDARHTALYKRILSVLRNGIAIGNKK 456 Query: 240 FDFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWET 61 F+FLAFS+SQLR+NS WMFAS EVT++HIR WMG+F +I+NVA Y+ARLGQSFS S ET Sbjct: 457 FEFLAFSSSQLRDNSAWMFASGIEVTANHIREWMGDFRSIRNVAKYAARLGQSFSSSTET 516 Query: 60 FVVEKNECRTIEDI 19 V ++E I+D+ Sbjct: 517 LCVGRHEVDIIDDV 530 >OAY79234.1 RNA-dependent RNA polymerase 1, partial [Ananas comosus] Length = 3431 Score = 186 bits (473), Expect = 4e-50 Identities = 104/254 (40%), Positives = 155/254 (61%) Frame = -3 Query: 780 ILSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQA 601 I+S P L EFF+++ Y ++ A+ +MS K CL+P N L Sbjct: 335 IISGPTLDDEFFRLVCPYLVPVDYIVHAIEKMSCFKKTCLDPANWL-------------- 380 Query: 600 SKRFKSRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHF 421 S+ Y Y ++ ++ ++ VTPSK+Y GPE+ SNRV R+F Sbjct: 381 -----SKQYLKYEQSDCPPKSPRIYLDDGLVYVHRVQVTPSKVYFCGPEVNVSNRVLRYF 435 Query: 420 SKNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIHNKK 241 S + +F++V+FVDED+EK++ + L+ + SS + + ++ RIL+ L++G+ I NKK Sbjct: 436 SDEMNNFLRVSFVDEDWEKMYSTNLSPWSV--SSNDARHTALYKRILSVLRNGIAIGNKK 493 Query: 240 FDFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWET 61 F+FLAFS+SQLR+NS WMFAS EVT++HIR WMG+F +I+NVA Y+ARLGQSFS S ET Sbjct: 494 FEFLAFSSSQLRDNSAWMFASGIEVTANHIREWMGDFRSIRNVAKYAARLGQSFSSSTET 553 Query: 60 FVVEKNECRTIEDI 19 V ++E I+D+ Sbjct: 554 LCVGRHEVDIIDDV 567 Score = 185 bits (469), Expect = 1e-49 Identities = 103/253 (40%), Positives = 153/253 (60%) Frame = -3 Query: 777 LSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQAS 598 +S P L EFF+++ Y S ++ A+ +MS K CL+P N L Sbjct: 1451 ISGPTLDDEFFRLVSPYLVSVDYIIHAIEKMSCFKKTCLDPVNWL--------------- 1495 Query: 597 KRFKSRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHFS 418 S Y Y + ++ ++ +TPSK+Y GPE+ SNRV RHFS Sbjct: 1496 ----SNQYLKYEQSDCPPKSPRISLDDGLVYVHRVQITPSKVYFCGPEVNVSNRVLRHFS 1551 Query: 417 KNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIHNKKF 238 + +F++V+FVDED EK+ ++L+ ++ GSS + + ++ RIL+ L++G+ I NKKF Sbjct: 1552 DEMINFLRVSFVDEDCEKMRSTDLSPRS--GSSNGARHTALYKRILSVLRNGIAIGNKKF 1609 Query: 237 DFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWETF 58 +FLAFS+SQLR+NS WMFAS E+T++ IR WMG+F +I+NVA Y+ARLGQSFS S ET Sbjct: 1610 EFLAFSSSQLRDNSAWMFASGIEMTANDIRQWMGDFRSIRNVAKYAARLGQSFSSSTETL 1669 Query: 57 VVEKNECRTIEDI 19 V ++E I+D+ Sbjct: 1670 SVGRHEVDIIDDV 1682 Score = 184 bits (468), Expect = 2e-49 Identities = 104/257 (40%), Positives = 156/257 (60%), Gaps = 4/257 (1%) Frame = -3 Query: 777 LSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQAS 598 +S P L EFF+++ Y ++ A+ +MS K CL+P L ++ + Sbjct: 2579 ISGPTLDDEFFRLVSPYLVPVDYIVHAIEKMSCFKKTCLDPAIWLSKQYLK--------- 2629 Query: 597 KRFKSRLYNLYNADFKQSD----RAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVT 430 +KQSD + ++ ++ VTPSK+Y GPE+ SNRV Sbjct: 2630 --------------YKQSDCPPKSPRISLDDGLVYVHRVQVTPSKVYFCGPEVNVSNRVL 2675 Query: 429 RHFSKNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIH 250 RHFS + +F++V+FVDED EK+ ++L+ ++ GSS + + ++ RIL+ L++G+ I Sbjct: 2676 RHFSDEMNNFLRVSFVDEDCEKMRSTDLSPRS--GSSNGARHTALYKRILSVLRNGIAIG 2733 Query: 249 NKKFDFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCS 70 NKKF+FLAFS+SQLR+NS WMFAS E+T+S IR WMG+F +I+NVA Y+ARLGQSFS S Sbjct: 2734 NKKFEFLAFSSSQLRDNSAWMFASGIEMTASDIRQWMGDFRSIRNVAKYAARLGQSFSSS 2793 Query: 69 WETFVVEKNECRTIEDI 19 ET V ++E I+D+ Sbjct: 2794 TETLSVGRHEVDIIDDV 2810 >XP_017970690.1 PREDICTED: RNA-dependent RNA polymerase 1 [Theobroma cacao] XP_007045552.2 PREDICTED: RNA-dependent RNA polymerase 1 [Theobroma cacao] Length = 1109 Score = 186 bits (472), Expect = 4e-50 Identities = 101/259 (38%), Positives = 152/259 (58%) Frame = -3 Query: 777 LSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQAS 598 + PAL F++++ +++ AL ++ LK C EP L + Sbjct: 294 IPGPALDANFYRLVNPCRIDKVYIDHALEKLYYLKECCFEPSKWLLEQ------------ 341 Query: 597 KRFKSRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHFS 418 Y Y A K + ++ + +TPS++Y GPE+ SNRV RHF Sbjct: 342 -------YKGYIASKKNPGSPVISLDDGLVNVRRVQITPSRVYFCGPEINVSNRVLRHFH 394 Query: 417 KNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIHNKKF 238 +I++F+++TFVDE+ EK+H ++L + + ++I+ RIL+TLK+G+VI +K+F Sbjct: 395 DDIDNFLRITFVDEELEKIHSTDLLTRN--------RITEIYGRILSTLKNGIVIGDKQF 446 Query: 237 DFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWETF 58 +FLAFS+SQLRENS WMFAS + +T++ IR WMG F I+NVA Y+ARLGQSFS S ET Sbjct: 447 EFLAFSSSQLRENSAWMFASREGLTAADIRTWMGEFSKIRNVAKYAARLGQSFSSSTETL 506 Query: 57 VVEKNECRTIEDIEVITDG 1 V K+E I+D+E+ DG Sbjct: 507 SVAKDEIEIIDDVEIKRDG 525 >EOY01384.1 RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao] EOY01385.1 RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao] EOY01386.1 RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao] Length = 1109 Score = 186 bits (472), Expect = 4e-50 Identities = 101/259 (38%), Positives = 152/259 (58%) Frame = -3 Query: 777 LSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQAS 598 + PAL F++++ +++ AL ++ LK C EP L + Sbjct: 294 IPGPALDANFYRLVNPCRIDKVYIDHALEKLYYLKECCFEPSKWLLEQ------------ 341 Query: 597 KRFKSRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHFS 418 Y Y A K + ++ + +TPS++Y GPE+ SNRV RHF Sbjct: 342 -------YKGYIASKKNPGSPVISLDDGLVNVRRVQITPSRVYFCGPEINVSNRVLRHFH 394 Query: 417 KNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIHNKKF 238 +I++F+++TFVDE+ EK+H ++L + + ++I+ RIL+TLK+G+VI +K+F Sbjct: 395 DDIDNFLRITFVDEELEKIHSTDLLTRN--------RITEIYGRILSTLKNGIVIGDKQF 446 Query: 237 DFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWETF 58 +FLAFS+SQLRENS WMFAS + +T++ IR WMG F I+NVA Y+ARLGQSFS S ET Sbjct: 447 EFLAFSSSQLRENSAWMFASREGLTAADIRTWMGEFSKIRNVAKYAARLGQSFSSSTETL 506 Query: 57 VVEKNECRTIEDIEVITDG 1 V K+E I+D+E+ DG Sbjct: 507 SVAKDEIEIIDDVEIKRDG 525 >XP_018501948.1 PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X3 [Pyrus x bretschneideri] Length = 1105 Score = 185 bits (470), Expect = 8e-50 Identities = 101/252 (40%), Positives = 159/252 (63%), Gaps = 1/252 (0%) Frame = -3 Query: 765 ALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQASKRFK 586 AL F++++ ++ AL ++ RLK+ C +P + L ++ Sbjct: 276 ALDVHFYKLVDPSTIRIEYIECALDKLFRLKARCYDPVSWLFQQ---------------- 319 Query: 585 SRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHFSKNIE 406 Y Y A + D A+ M+ ++ VTPSK+Y GPE+ SNRV R + ++++ Sbjct: 320 ---YREYLACKQIPDSPAISLDDGMVYVHRVRVTPSKVYFCGPEVNLSNRVLRKYPEDLD 376 Query: 405 DFVKVTFVDEDYEKLHFSELTVKTEKGSSGAL-KGSKIHDRILTTLKDGLVIHNKKFDFL 229 +F++V+FVDED K+ +L + T+ +S + +++++RIL+TL++G+VI +KKF+FL Sbjct: 377 NFLRVSFVDEDLSKIRSKDLCLHTKCNTSAEEDRRTRVYERILSTLRNGIVIGDKKFEFL 436 Query: 228 AFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWETFVVE 49 AFS+SQLRE+SVWMFAS E+T+ IRNWMG+F NI+NVA Y ARLGQ+FS S ETF V+ Sbjct: 437 AFSSSQLREHSVWMFASRSELTAQDIRNWMGDFSNIRNVAKYGARLGQAFSSSRETFNVD 496 Query: 48 KNECRTIEDIEV 13 ++E I D+E+ Sbjct: 497 RDEIEFIPDVEI 508 >CCD74482.1 RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri] Length = 1107 Score = 185 bits (470), Expect = 8e-50 Identities = 106/259 (40%), Positives = 156/259 (60%) Frame = -3 Query: 777 LSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQAS 598 L PAL + +Q+L + ++ L ++ L C EP L+++ EL S Sbjct: 296 LPGPALDLDVYQLLNPKKYNRALIDHCLEKLFHLGESCYEPARWLRKQYKEL-------S 348 Query: 597 KRFKSRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHFS 418 + K L + D ++ Y+ VTP+++Y GPE+ SNRV RH+S Sbjct: 349 SKGKLPLSPTISLD------------DGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYS 396 Query: 417 KNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIHNKKF 238 K I +F++V+FVDED EK+ +L+ + S + +K++DRI + L+DG+VI +KKF Sbjct: 397 KYINNFLRVSFVDEDLEKVRSMDLSPR-----SSTQRRTKLYDRIYSVLRDGIVIGDKKF 451 Query: 237 DFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWETF 58 +FLAFS+SQLRENS WMFA +TS+HIR WMG+F++I+NVA Y+ARLGQSFS S ET Sbjct: 452 EFLAFSSSQLRENSAWMFAPIDGLTSAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETL 511 Query: 57 VVEKNECRTIEDIEVITDG 1 V +E I D+E+I+ G Sbjct: 512 NVRSDEIEVIPDVEIISLG 530 >XP_009351560.1 PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X2 [Pyrus x bretschneideri] XP_018501947.1 PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X2 [Pyrus x bretschneideri] Length = 1116 Score = 185 bits (470), Expect = 8e-50 Identities = 101/252 (40%), Positives = 159/252 (63%), Gaps = 1/252 (0%) Frame = -3 Query: 765 ALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQASKRFK 586 AL F++++ ++ AL ++ RLK+ C +P + L ++ Sbjct: 276 ALDVHFYKLVDPSTIRIEYIECALDKLFRLKARCYDPVSWLFQQ---------------- 319 Query: 585 SRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHFSKNIE 406 Y Y A + D A+ M+ ++ VTPSK+Y GPE+ SNRV R + ++++ Sbjct: 320 ---YREYLACKQIPDSPAISLDDGMVYVHRVRVTPSKVYFCGPEVNLSNRVLRKYPEDLD 376 Query: 405 DFVKVTFVDEDYEKLHFSELTVKTEKGSSGAL-KGSKIHDRILTTLKDGLVIHNKKFDFL 229 +F++V+FVDED K+ +L + T+ +S + +++++RIL+TL++G+VI +KKF+FL Sbjct: 377 NFLRVSFVDEDLSKIRSKDLCLHTKCNTSAEEDRRTRVYERILSTLRNGIVIGDKKFEFL 436 Query: 228 AFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWETFVVE 49 AFS+SQLRE+SVWMFAS E+T+ IRNWMG+F NI+NVA Y ARLGQ+FS S ETF V+ Sbjct: 437 AFSSSQLREHSVWMFASRSELTAQDIRNWMGDFSNIRNVAKYGARLGQAFSSSRETFNVD 496 Query: 48 KNECRTIEDIEV 13 ++E I D+E+ Sbjct: 497 RDEIEFIPDVEI 508 >XP_008381757.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Malus domestica] XP_017190342.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Malus domestica] Length = 1119 Score = 185 bits (470), Expect = 8e-50 Identities = 101/256 (39%), Positives = 161/256 (62%), Gaps = 1/256 (0%) Frame = -3 Query: 765 ALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQASKRFK 586 AL F++++ ++ AL ++ RLK+ C +P + L ++ Sbjct: 279 ALDVNFYKLVDPSTIGIEYIECALDKLFRLKACCYDPVSWLFQQ---------------- 322 Query: 585 SRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHFSKNIE 406 Y Y A + + A+ M+ ++ VTPSK+Y GPE+ SNRV R + ++++ Sbjct: 323 ---YREYLACKRIPESPAISLDDGMVYVHRVRVTPSKVYFCGPEVNLSNRVLRKYPEDLD 379 Query: 405 DFVKVTFVDEDYEKLHFSELTVKTEKGSSGAL-KGSKIHDRILTTLKDGLVIHNKKFDFL 229 +F++V+FVDED K+ +L + T+ +S + +++++RIL+TL++G+VI +KKF+FL Sbjct: 380 NFLRVSFVDEDLSKIRSKDLCLHTKCNTSAEEERRTRVYERILSTLRNGIVIGDKKFEFL 439 Query: 228 AFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWETFVVE 49 AFS+SQLRE+SVWMFAS E+T+ IRNWMG+F NI+NVA Y ARLGQ+FS S ETF V+ Sbjct: 440 AFSSSQLREHSVWMFASRSELTAQDIRNWMGDFSNIRNVAKYGARLGQAFSSSRETFNVD 499 Query: 48 KNECRTIEDIEVITDG 1 ++E I D+E+ +G Sbjct: 500 RDEIEFIPDVEIKRNG 515 >XP_002892830.1 RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata] EFH69089.1 RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata] Length = 1107 Score = 184 bits (468), Expect = 2e-49 Identities = 106/259 (40%), Positives = 156/259 (60%) Frame = -3 Query: 777 LSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQAS 598 L PAL + +Q+L ++ L ++ L C EP L+++ EL S Sbjct: 296 LPGPALDLDVYQLLNPKKIDRALIDHCLEKLFYLGESCYEPARWLRKQYKEL-------S 348 Query: 597 KRFKSRLYNLYNADFKQSDRAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVTRHFS 418 + K L + D ++ Y+ VTP+++Y GPE+ SNRV RH+S Sbjct: 349 SKGKLPLSPTISLD------------DGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYS 396 Query: 417 KNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIHNKKF 238 K I +F++V+FVDED EK+ +L+ + S + +K++DRI + L+DG+VI +KKF Sbjct: 397 KYINNFLRVSFVDEDLEKVRSMDLSPR-----SSTQRRTKLYDRIYSVLRDGIVIGDKKF 451 Query: 237 DFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCSWETF 58 +FLAFS+SQLRENS WMFA + +TS+HIR WMG+F++I+NVA Y+ARLGQSFS S ET Sbjct: 452 EFLAFSSSQLRENSAWMFAPIEGLTSAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETL 511 Query: 57 VVEKNECRTIEDIEVITDG 1 V +E I D+E+I+ G Sbjct: 512 NVRSDEIEVIPDVEIISLG 530 >XP_020089659.1 probable RNA-dependent RNA polymerase 1 [Ananas comosus] XP_020089661.1 probable RNA-dependent RNA polymerase 1 [Ananas comosus] Length = 1133 Score = 184 bits (468), Expect = 2e-49 Identities = 104/257 (40%), Positives = 156/257 (60%), Gaps = 4/257 (1%) Frame = -3 Query: 777 LSAPALTYEFFQILQTYNGSPFHVNIALSEMSRLKSPCLEPHNRLKRRLCELGCGDLQAS 598 +S P L EFF+++ Y ++ A+ +MS K CL+P L ++ + Sbjct: 299 ISGPTLDDEFFRLVSPYLVPVDYIVHAIEKMSCFKKTCLDPAIWLSKQYLK--------- 349 Query: 597 KRFKSRLYNLYNADFKQSD----RAAVFKQKKMMKFYKAVVTPSKIYHIGPELKRSNRVT 430 +KQSD + ++ ++ VTPSK+Y GPE+ SNRV Sbjct: 350 --------------YKQSDCPPKSPRISLDDGLVYVHRVQVTPSKVYFCGPEVNVSNRVL 395 Query: 429 RHFSKNIEDFVKVTFVDEDYEKLHFSELTVKTEKGSSGALKGSKIHDRILTTLKDGLVIH 250 RHFS + +F++V+FVDED EK+ ++L+ ++ GSS + + ++ RIL+ L++G+ I Sbjct: 396 RHFSDEMNNFLRVSFVDEDCEKMRSTDLSPRS--GSSNGARHTALYKRILSVLRNGIAIG 453 Query: 249 NKKFDFLAFSASQLRENSVWMFASTKEVTSSHIRNWMGNFENIKNVALYSARLGQSFSCS 70 NKKF+FLAFS+SQLR+NS WMFAS E+T+S IR WMG+F +I+NVA Y+ARLGQSFS S Sbjct: 454 NKKFEFLAFSSSQLRDNSAWMFASGIEMTASDIRQWMGDFRSIRNVAKYAARLGQSFSSS 513 Query: 69 WETFVVEKNECRTIEDI 19 ET V ++E I+D+ Sbjct: 514 TETLSVGRHEVDIIDDV 530