BLASTX nr result
ID: Ephedra29_contig00020759
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00020759
(288 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJA90770.1 RNA-dependent RNA polymerase 2 [Ephedra trifurca] 153 3e-41
AJA90786.1 RNA-dependent RNA polymerase 2 [Pinus canariensis] 151 1e-40
AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta] 149 6e-40
XP_010271987.1 PREDICTED: RNA-dependent RNA polymerase 2 [Nelumb... 147 5e-39
AJA90778.1 RNA-dependent RNA polymerase 2 [Ginkgo biloba] 146 1e-38
AJP06346.1 RDR2 [Pinus tabuliformis] 145 2e-38
EEE61147.1 hypothetical protein OsJ_15104 [Oryza sativa Japonica... 138 8e-38
BAF14941.1 Os04g0465700, partial [Oryza sativa Japonica Group] B... 138 2e-37
ACR38600.1 unknown [Zea mays] 140 3e-37
XP_020195647.1 probable RNA-dependent RNA polymerase 2 isoform X... 141 5e-37
XP_020195646.1 probable RNA-dependent RNA polymerase 2 isoform X... 141 6e-37
XP_002280099.1 PREDICTED: RNA-dependent RNA polymerase 2 [Vitis ... 141 6e-37
XP_002446635.1 hypothetical protein SORBIDRAFT_06g019330 [Sorghu... 140 8e-37
XP_020188327.1 probable RNA-dependent RNA polymerase 2 [Aegilops... 140 8e-37
EMT07612.1 hypothetical protein F775_11614 [Aegilops tauschii] 140 8e-37
ONM16858.1 mediator of paramutation1 [Zea mays] 140 1e-36
ONM16849.1 mediator of paramutation1 [Zea mays] ONM16850.1 media... 140 1e-36
ONM16854.1 mediator of paramutation1 [Zea mays] 140 1e-36
ONM16859.1 mediator of paramutation1 [Zea mays] 140 1e-36
XP_008668575.1 PREDICTED: RNA-dependent DNA polymerase isoform X... 140 1e-36
>AJA90770.1 RNA-dependent RNA polymerase 2 [Ephedra trifurca]
Length = 1111
Score = 153 bits (387), Expect = 3e-41
Identities = 71/93 (76%), Positives = 82/93 (88%)
Frame = +1
Query: 7 KLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAVDF 186
+L+H+VTIEE+QEYFVNYMLND+LG+I+NAH VHAD+EPLKARS KCLELA+L KAVDF
Sbjct: 848 RLDHNVTIEEIQEYFVNYMLNDSLGIIANAHVVHADREPLKARSEKCLELARLHAKAVDF 907
Query: 187 AKTGVPAEMPYSLFPKEYPDFMEKNDRPMYIST 285
AKTG PAEMP L P+EYPDFMEK +PMY ST
Sbjct: 908 AKTGAPAEMPLRLIPREYPDFMEKEGKPMYEST 940
>AJA90786.1 RNA-dependent RNA polymerase 2 [Pinus canariensis]
Length = 1114
Score = 151 bits (382), Expect = 1e-40
Identities = 71/96 (73%), Positives = 85/96 (88%)
Frame = +1
Query: 1 PSKLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAV 180
P KL+H VTI+E+QEYFVNYMLND+LG+I+NAH V+AD++PLKARS KC LA+L KAV
Sbjct: 850 PIKLDHDVTIKEIQEYFVNYMLNDSLGVIANAHVVYADRDPLKARSRKCQLLARLHSKAV 909
Query: 181 DFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
DFAKTGVPAEMP SL PKE+PDFMEK ++PMYIS+G
Sbjct: 910 DFAKTGVPAEMPLSLIPKEFPDFMEKANKPMYISSG 945
>AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta]
Length = 1117
Score = 149 bits (377), Expect = 6e-40
Identities = 70/96 (72%), Positives = 80/96 (83%)
Frame = +1
Query: 1 PSKLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAV 180
P +L+H VTIEE+QEYFVNYMLND+LG+I+N H V+AD+EP KARSP C LA L KAV
Sbjct: 851 PIQLDHEVTIEEIQEYFVNYMLNDSLGVIANTHVVYADREPSKARSPTCQRLAMLHSKAV 910
Query: 181 DFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
DF KTG PAEMP LFPKEYPDFMEK D+PMY+STG
Sbjct: 911 DFPKTGAPAEMPLLLFPKEYPDFMEKWDKPMYMSTG 946
>XP_010271987.1 PREDICTED: RNA-dependent RNA polymerase 2 [Nelumbo nucifera]
Length = 1115
Score = 147 bits (370), Expect = 5e-39
Identities = 67/93 (72%), Positives = 78/93 (83%)
Frame = +1
Query: 10 LNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAVDFA 189
++H VT+EE+Q+YFVNYM+NDTLG+IS AH +HAD+EP KARSPKCL+LA L AVDFA
Sbjct: 855 MDHEVTLEEIQKYFVNYMINDTLGVISTAHVIHADREPSKARSPKCLQLAALHSMAVDFA 914
Query: 190 KTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
KTG PAEMP L PKEYPDFME+ DRPMY S G
Sbjct: 915 KTGAPAEMPRVLKPKEYPDFMERGDRPMYASPG 947
>AJA90778.1 RNA-dependent RNA polymerase 2 [Ginkgo biloba]
Length = 1114
Score = 146 bits (368), Expect = 1e-38
Identities = 69/96 (71%), Positives = 79/96 (82%)
Frame = +1
Query: 1 PSKLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAV 180
P +L+H VTIEE+QEYFVNYMLNDTLG+I+N + VHAD+EP KARS KC LA+LQ KAV
Sbjct: 852 PIQLDHEVTIEEIQEYFVNYMLNDTLGVIANTYVVHADREPSKARSKKCQLLARLQSKAV 911
Query: 181 DFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
DF K G AEMP SL PKEYPDFMEK D+PMY S+G
Sbjct: 912 DFPKKGASAEMPLSLIPKEYPDFMEKEDKPMYTSSG 947
>AJP06346.1 RDR2 [Pinus tabuliformis]
Length = 1123
Score = 145 bits (366), Expect = 2e-38
Identities = 71/105 (67%), Positives = 85/105 (80%), Gaps = 9/105 (8%)
Frame = +1
Query: 1 PSKLNHSVTI---------EEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLE 153
P KL+H VTI +E+QEYFVNYMLND+LG+I+NAH V+AD++PLKARS KC
Sbjct: 850 PIKLDHDVTIKDLSNAFLIQEIQEYFVNYMLNDSLGVIANAHVVYADRDPLKARSQKCQL 909
Query: 154 LAKLQGKAVDFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
LA+L KAVDFAKTGVPAEMP SL PKE+PDFMEK ++PMYIS+G
Sbjct: 910 LARLHSKAVDFAKTGVPAEMPLSLIPKEFPDFMEKGNKPMYISSG 954
>EEE61147.1 hypothetical protein OsJ_15104 [Oryza sativa Japonica Group]
Length = 335
Score = 138 bits (347), Expect = 8e-38
Identities = 62/96 (64%), Positives = 80/96 (83%)
Frame = +1
Query: 1 PSKLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAV 180
P ++H VT+EE+Q++FV+YM+ND+LG IS AH +HAD+ PLKARSP+CL+LA L AV
Sbjct: 53 PRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPECLQLATLHSMAV 112
Query: 181 DFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
DFAKTG PAEMP +L P+EYPDFME+ ++PMYIS G
Sbjct: 113 DFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNG 148
>BAF14941.1 Os04g0465700, partial [Oryza sativa Japonica Group] BAS89603.1
Os04g0465700, partial [Oryza sativa Japonica Group]
Length = 377
Score = 138 bits (347), Expect = 2e-37
Identities = 62/96 (64%), Positives = 80/96 (83%)
Frame = +1
Query: 1 PSKLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAV 180
P ++H VT+EE+Q++FV+YM+ND+LG IS AH +HAD+ PLKARSP+CL+LA L AV
Sbjct: 95 PRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPECLQLATLHSMAV 154
Query: 181 DFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
DFAKTG PAEMP +L P+EYPDFME+ ++PMYIS G
Sbjct: 155 DFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNG 190
>ACR38600.1 unknown [Zea mays]
Length = 525
Score = 140 bits (352), Expect = 3e-37
Identities = 61/96 (63%), Positives = 82/96 (85%)
Frame = +1
Query: 1 PSKLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAV 180
P ++H+VT+EE+Q++FV+YM+NDTLG IS AH +HAD++PLKARSP+C++LA L AV
Sbjct: 252 PRIMDHAVTLEEIQKHFVSYMINDTLGAISTAHLIHADRDPLKARSPECVQLAALHSMAV 311
Query: 181 DFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
DFAKTG PAEMP +L P+E+PDFME+ +RPMY+S G
Sbjct: 312 DFAKTGAPAEMPLALRPREFPDFMERWERPMYVSNG 347
>XP_020195647.1 probable RNA-dependent RNA polymerase 2 isoform X2 [Aegilops
tauschii subsp. tauschii]
Length = 943
Score = 141 bits (355), Expect = 5e-37
Identities = 65/96 (67%), Positives = 79/96 (82%)
Frame = +1
Query: 1 PSKLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAV 180
P ++H VT+EE+Q+YFV+YM+ND+LG IS AH VHAD+ P+KARSP+CL+LA L AV
Sbjct: 674 PRIMDHVVTLEEIQKYFVDYMINDSLGAISTAHLVHADRHPMKARSPECLQLAALHSMAV 733
Query: 181 DFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
DFAKTG PAEMP SL PKEYPDFME+ D+P YIS G
Sbjct: 734 DFAKTGAPAEMPRSLRPKEYPDFMERWDKPTYISNG 769
>XP_020195646.1 probable RNA-dependent RNA polymerase 2 isoform X1 [Aegilops tauschii
subsp. tauschii]
Length = 1127
Score = 141 bits (355), Expect = 6e-37
Identities = 65/96 (67%), Positives = 79/96 (82%)
Frame = +1
Query: 1 PSKLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAV 180
P ++H VT+EE+Q+YFV+YM+ND+LG IS AH VHAD+ P+KARSP+CL+LA L AV
Sbjct: 858 PRIMDHVVTLEEIQKYFVDYMINDSLGAISTAHLVHADRHPMKARSPECLQLAALHSMAV 917
Query: 181 DFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
DFAKTG PAEMP SL PKEYPDFME+ D+P YIS G
Sbjct: 918 DFAKTGAPAEMPRSLRPKEYPDFMERWDKPTYISNG 953
>XP_002280099.1 PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera] CBI15062.3
unnamed protein product, partial [Vitis vinifera]
Length = 1127
Score = 141 bits (355), Expect = 6e-37
Identities = 66/96 (68%), Positives = 79/96 (82%)
Frame = +1
Query: 1 PSKLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAV 180
P ++H VT+EE+Q++FV+YM+NDTLG+IS AH VHAD+EP KARS KCLELA L AV
Sbjct: 852 PRIMDHDVTLEEIQKFFVDYMINDTLGVISTAHLVHADREPEKARSKKCLELATLHSMAV 911
Query: 181 DFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
DFAKTG PAEMP L PKE+PDFME+ D+PMYIS G
Sbjct: 912 DFAKTGAPAEMPRVLKPKEFPDFMERVDKPMYISNG 947
>XP_002446635.1 hypothetical protein SORBIDRAFT_06g019330 [Sorghum bicolor]
EES10963.1 hypothetical protein SORBI_006G111200 [Sorghum
bicolor]
Length = 1128
Score = 140 bits (354), Expect = 8e-37
Identities = 62/95 (65%), Positives = 81/95 (85%)
Frame = +1
Query: 1 PSKLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAV 180
P ++H+VT+EE+Q++FVNYM+ND LG+IS AH +HAD+ PLKARSP+CL+LA L AV
Sbjct: 855 PRIMDHAVTLEEIQKHFVNYMINDALGVISTAHLIHADRNPLKARSPECLQLAALHSMAV 914
Query: 181 DFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYIST 285
DFAKTG PAEMP +L P+E+PDFME+ +RPMY+ST
Sbjct: 915 DFAKTGAPAEMPVALRPREFPDFMERWERPMYVST 949
>XP_020188327.1 probable RNA-dependent RNA polymerase 2 [Aegilops tauschii subsp.
tauschii]
Length = 1133
Score = 140 bits (354), Expect = 8e-37
Identities = 64/96 (66%), Positives = 80/96 (83%)
Frame = +1
Query: 1 PSKLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAV 180
P ++H VT+EE+Q+YFV+YM+ND+LG IS AH VHAD+ P+KARSP+CL+LA L AV
Sbjct: 854 PRIMDHVVTLEEIQKYFVDYMINDSLGAISTAHLVHADRHPMKARSPECLQLAALHSMAV 913
Query: 181 DFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
DFAK+G PAEMP SL P+EYPDFME+ D+PMYIS G
Sbjct: 914 DFAKSGAPAEMPRSLRPREYPDFMERWDKPMYISNG 949
>EMT07612.1 hypothetical protein F775_11614 [Aegilops tauschii]
Length = 1160
Score = 140 bits (354), Expect = 8e-37
Identities = 64/96 (66%), Positives = 80/96 (83%)
Frame = +1
Query: 1 PSKLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAV 180
P ++H VT+EE+Q+YFV+YM+ND+LG IS AH VHAD+ P+KARSP+CL+LA L AV
Sbjct: 881 PRIMDHVVTLEEIQKYFVDYMINDSLGAISTAHLVHADRHPMKARSPECLQLAALHSMAV 940
Query: 181 DFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
DFAK+G PAEMP SL P+EYPDFME+ D+PMYIS G
Sbjct: 941 DFAKSGAPAEMPRSLRPREYPDFMERWDKPMYISNG 976
>ONM16858.1 mediator of paramutation1 [Zea mays]
Length = 688
Score = 140 bits (352), Expect = 1e-36
Identities = 61/96 (63%), Positives = 82/96 (85%)
Frame = +1
Query: 1 PSKLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAV 180
P ++H+VT+EE+Q++FV+YM+NDTLG IS AH +HAD++PLKARSP+C++LA L AV
Sbjct: 415 PRIMDHAVTLEEIQKHFVSYMINDTLGAISTAHLIHADRDPLKARSPECVQLAALHSMAV 474
Query: 181 DFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
DFAKTG PAEMP +L P+E+PDFME+ +RPMY+S G
Sbjct: 475 DFAKTGAPAEMPLALRPREFPDFMERWERPMYVSNG 510
>ONM16849.1 mediator of paramutation1 [Zea mays] ONM16850.1 mediator of
paramutation1 [Zea mays] ONM16851.1 mediator of
paramutation1 [Zea mays] ONM16852.1 mediator of
paramutation1 [Zea mays] ONM16856.1 mediator of
paramutation1 [Zea mays]
Length = 860
Score = 140 bits (352), Expect = 1e-36
Identities = 61/96 (63%), Positives = 82/96 (85%)
Frame = +1
Query: 1 PSKLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAV 180
P ++H+VT+EE+Q++FV+YM+NDTLG IS AH +HAD++PLKARSP+C++LA L AV
Sbjct: 587 PRIMDHAVTLEEIQKHFVSYMINDTLGAISTAHLIHADRDPLKARSPECVQLAALHSMAV 646
Query: 181 DFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
DFAKTG PAEMP +L P+E+PDFME+ +RPMY+S G
Sbjct: 647 DFAKTGAPAEMPLALRPREFPDFMERWERPMYVSNG 682
>ONM16854.1 mediator of paramutation1 [Zea mays]
Length = 950
Score = 140 bits (352), Expect = 1e-36
Identities = 61/96 (63%), Positives = 82/96 (85%)
Frame = +1
Query: 1 PSKLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAV 180
P ++H+VT+EE+Q++FV+YM+NDTLG IS AH +HAD++PLKARSP+C++LA L AV
Sbjct: 677 PRIMDHAVTLEEIQKHFVSYMINDTLGAISTAHLIHADRDPLKARSPECVQLAALHSMAV 736
Query: 181 DFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
DFAKTG PAEMP +L P+E+PDFME+ +RPMY+S G
Sbjct: 737 DFAKTGAPAEMPLALRPREFPDFMERWERPMYVSNG 772
>ONM16859.1 mediator of paramutation1 [Zea mays]
Length = 985
Score = 140 bits (352), Expect = 1e-36
Identities = 61/96 (63%), Positives = 82/96 (85%)
Frame = +1
Query: 1 PSKLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAV 180
P ++H+VT+EE+Q++FV+YM+NDTLG IS AH +HAD++PLKARSP+C++LA L AV
Sbjct: 712 PRIMDHAVTLEEIQKHFVSYMINDTLGAISTAHLIHADRDPLKARSPECVQLAALHSMAV 771
Query: 181 DFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
DFAKTG PAEMP +L P+E+PDFME+ +RPMY+S G
Sbjct: 772 DFAKTGAPAEMPLALRPREFPDFMERWERPMYVSNG 807
>XP_008668575.1 PREDICTED: RNA-dependent DNA polymerase isoform X1 [Zea mays]
ONM16853.1 mediator of paramutation1 [Zea mays]
Length = 1091
Score = 140 bits (352), Expect = 1e-36
Identities = 61/96 (63%), Positives = 82/96 (85%)
Frame = +1
Query: 1 PSKLNHSVTIEEVQEYFVNYMLNDTLGLISNAHSVHADKEPLKARSPKCLELAKLQGKAV 180
P ++H+VT+EE+Q++FV+YM+NDTLG IS AH +HAD++PLKARSP+C++LA L AV
Sbjct: 818 PRIMDHAVTLEEIQKHFVSYMINDTLGAISTAHLIHADRDPLKARSPECVQLAALHSMAV 877
Query: 181 DFAKTGVPAEMPYSLFPKEYPDFMEKNDRPMYISTG 288
DFAKTG PAEMP +L P+E+PDFME+ +RPMY+S G
Sbjct: 878 DFAKTGAPAEMPLALRPREFPDFMERWERPMYVSNG 913