BLASTX nr result
ID: Ephedra29_contig00020386
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00020386
(289 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX19931.1 viral replicase [Nandina mosaic virus] 199 2e-57
AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 197 7e-57
AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiat... 194 1e-56
BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 194 9e-56
ANY93292.1 RdRp [Plantago asiatica mosaic virus] 194 2e-55
AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 194 2e-55
AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 194 2e-55
AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 194 2e-55
AMD78101.1 RdRP [Plantago asiatica mosaic virus] 194 2e-55
CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 194 2e-55
BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 193 3e-55
BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 193 3e-55
BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 193 3e-55
BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 193 3e-55
BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 193 3e-55
BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 193 3e-55
AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 191 2e-54
NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 ... 186 6e-53
NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC1678... 155 8e-42
NP_044330.1 replicase [Papaya mosaic virus] P20951.1 RecName: Fu... 124 5e-31
>AAX19931.1 viral replicase [Nandina mosaic virus]
Length = 1368
Score = 199 bits (507), Expect = 2e-57
Identities = 91/96 (94%), Positives = 94/96 (97%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFHKYDQLEWLT+GHL APNQPT+TAQRLETKGANHLFIFQRGNYLTPERRT
Sbjct: 207 PGGHAGASYFHKYDQLEWLTIGHLQAPNQPTVTAQRLETKGANHLFIFQRGNYLTPERRT 266
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
FTTT+ YVTVPDIFLPEKYNCRTPISKTIMMQMFFY
Sbjct: 267 FTTTDPYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 302
>AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
AMY62708.1 RNA-dependent RNA polymerase [Plantago
asiatica mosaic virus]
Length = 1380
Score = 197 bits (502), Expect = 7e-57
Identities = 91/96 (94%), Positives = 92/96 (95%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFHKY QLEWLTVGHLTAP PT+TAQRLETKGANHLFIFQRGNYLTPERRT
Sbjct: 207 PGGHAGASYFHKYSQLEWLTVGHLTAPGLPTVTAQRLETKGANHLFIFQRGNYLTPERRT 266
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
FTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFY
Sbjct: 267 FTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFY 302
>AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 669
Score = 194 bits (492), Expect = 1e-56
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFHKY QLEWLTVGHLTAP T+TAQRLETKGANHLFIFQRGNYLTPERRT
Sbjct: 207 PGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQRGNYLTPERRT 266
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
FTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFY
Sbjct: 267 FTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFY 302
>BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 194 bits (494), Expect = 9e-56
Identities = 89/96 (92%), Positives = 91/96 (94%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFHKY QLEWLTVGHLT P Q T+TAQRLETKGANHLFIFQRGNYLTPERRT
Sbjct: 207 PGGHAGASYFHKYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQRGNYLTPERRT 266
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
FTTTEHYVTVPD+FLP KYNCRTPISKTIMMQMFFY
Sbjct: 267 FTTTEHYVTVPDVFLPAKYNCRTPISKTIMMQMFFY 302
>ANY93292.1 RdRp [Plantago asiatica mosaic virus]
Length = 1380
Score = 194 bits (492), Expect = 2e-55
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFHKY QLEWLTVGHLTAP T+TAQRLETKGANHLFIFQRGNYLTPERRT
Sbjct: 207 PGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQRGNYLTPERRT 266
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
FTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFY
Sbjct: 267 FTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFY 302
>AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 194 bits (492), Expect = 2e-55
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFHKY QLEWLTVGHLTAP T+TAQRLETKGANHLFIFQRGNYLTPERRT
Sbjct: 207 PGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQRGNYLTPERRT 266
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
FTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFY
Sbjct: 267 FTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFY 302
>AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 194 bits (492), Expect = 2e-55
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFHKY QLEWLTVGHLTAP T+TAQRLETKGANHLFIFQRGNYLTPERRT
Sbjct: 207 PGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQRGNYLTPERRT 266
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
FTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFY
Sbjct: 267 FTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFY 302
>AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 194 bits (492), Expect = 2e-55
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFHKY QLEWLTVGHLTAP T+TAQRLETKGANHLFIFQRGNYLTPERRT
Sbjct: 207 PGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQRGNYLTPERRT 266
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
FTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFY
Sbjct: 267 FTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFY 302
>AMD78101.1 RdRP [Plantago asiatica mosaic virus]
Length = 1380
Score = 194 bits (492), Expect = 2e-55
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFHKY QLEWLTVGHLTAP T+TAQRLETKGANHLFIFQRGNYLTPERRT
Sbjct: 207 PGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQRGNYLTPERRT 266
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
FTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFY
Sbjct: 267 FTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFY 302
>CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 194 bits (492), Expect = 2e-55
Identities = 90/96 (93%), Positives = 91/96 (94%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFHKY QLEWLTVGHLTAP T+TAQRLETKGANHLFIFQRGNYLTPERRT
Sbjct: 207 PGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQRGNYLTPERRT 266
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
FTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFY
Sbjct: 267 FTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFY 302
>BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 193 bits (490), Expect = 3e-55
Identities = 89/96 (92%), Positives = 90/96 (93%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFH Y QLEWLTVGHLT P Q T+TAQRLETKGANHLFIFQRGNYLTPERRT
Sbjct: 207 PGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQRGNYLTPERRT 266
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
FTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFY
Sbjct: 267 FTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFY 302
>BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 193 bits (490), Expect = 3e-55
Identities = 89/96 (92%), Positives = 90/96 (93%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFH Y QLEWLTVGHLT P Q T+TAQRLETKGANHLFIFQRGNYLTPERRT
Sbjct: 207 PGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQRGNYLTPERRT 266
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
FTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFY
Sbjct: 267 FTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFY 302
>BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 193 bits (490), Expect = 3e-55
Identities = 89/96 (92%), Positives = 90/96 (93%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFH Y QLEWLTVGHLT P Q T+TAQRLETKGANHLFIFQRGNYLTPERRT
Sbjct: 207 PGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQRGNYLTPERRT 266
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
FTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFY
Sbjct: 267 FTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFY 302
>BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 193 bits (490), Expect = 3e-55
Identities = 89/96 (92%), Positives = 90/96 (93%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFH Y QLEWLTVGHLT P Q T+TAQRLETKGANHLFIFQRGNYLTPERRT
Sbjct: 207 PGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQRGNYLTPERRT 266
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
FTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFY
Sbjct: 267 FTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFY 302
>BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 193 bits (490), Expect = 3e-55
Identities = 89/96 (92%), Positives = 90/96 (93%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFH Y QLEWLTVGHLT P Q T+TAQRLETKGANHLFIFQRGNYLTPERRT
Sbjct: 207 PGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQRGNYLTPERRT 266
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
FTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFY
Sbjct: 267 FTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFY 302
>BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 193 bits (490), Expect = 3e-55
Identities = 89/96 (92%), Positives = 90/96 (93%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFH Y QLEWLTVGHLT P Q T+TAQRLETKGANHLFIFQRGNYLTPERRT
Sbjct: 207 PGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQRGNYLTPERRT 266
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
FTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFY
Sbjct: 267 FTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFY 302
>AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 191 bits (484), Expect = 2e-54
Identities = 87/96 (90%), Positives = 90/96 (93%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFH+YDQLEWLTVGHLTAP QPTITAQRLETKGANHLFIFQRGNYLTP RRT
Sbjct: 207 PGGHAGASYFHRYDQLEWLTVGHLTAPGQPTITAQRLETKGANHLFIFQRGNYLTPARRT 266
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
F T++HYVTVP IFLPE YNCRTPISKT MMQMFFY
Sbjct: 267 FATSDHYVTVPQIFLPEDYNCRTPISKTTMMQMFFY 302
>NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 RecName:
Full=RNA replication protein; AltName: Full=156 kDa
protein; AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase CAA79761.1 156K-protein [Plantago asiatica
mosaic virus]
Length = 1385
Score = 186 bits (473), Expect = 6e-53
Identities = 85/96 (88%), Positives = 88/96 (91%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASYFHKYDQLEWLTVGHLTAP PT+TAQRLETKGANHLFIFQRGNY+TPERRT
Sbjct: 206 PGGHAGASYFHKYDQLEWLTVGHLTAPGCPTVTAQRLETKGANHLFIFQRGNYITPERRT 265
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
F T + YVTVP IFLPE YNCRTPISKT MMQMFFY
Sbjct: 266 FATNDQYVTVPHIFLPENYNCRTPISKTTMMQMFFY 301
>NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC16785.1
RNA-dependent RNA polymerase [Tulip virus X]
Length = 1361
Score = 155 bits (391), Expect = 8e-42
Identities = 72/96 (75%), Positives = 82/96 (85%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQRGNYLTPERRT 181
PGGHAGASY+HKYDQL+WLT G+L + + T+TAQRLETKGANHLFIFQRG YLTPERRT
Sbjct: 207 PGGHAGASYYHKYDQLQWLTAGYLISEST-TVTAQRLETKGANHLFIFQRGRYLTPERRT 265
Query: 182 FTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
FTT YVTVP+IFLP N RTPI+KT+ MQ+FFY
Sbjct: 266 FTTATSYVTVPEIFLPSSANARTPITKTLAMQIFFY 301
>NP_044330.1 replicase [Papaya mosaic virus] P20951.1 RecName: Full=RNA
replication protein; AltName: Full=176 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase BAA03050.1 unnamed protein product [Papaya
mosaic virus] AFV46461.1 replicase [Papaya mosaic virus]
Length = 1547
Score = 124 bits (311), Expect = 5e-31
Identities = 58/100 (58%), Positives = 72/100 (72%), Gaps = 4/100 (4%)
Frame = +2
Query: 2 PGGHAGASYFHKYDQLEWLTVGHLTAPNQP----TITAQRLETKGANHLFIFQRGNYLTP 169
PGGHAGA+Y HKY+QLEW+ VG ++ +T+Q LETKGANHLFIFQRG +LTP
Sbjct: 209 PGGHAGAAYIHKYEQLEWIKVGRFKWADEKGLTHMVTSQILETKGANHLFIFQRGRFLTP 268
Query: 170 ERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFY 289
E R F+T YVT+P IFLP+++N R PI KT Q+F Y
Sbjct: 269 ELRCFSTETKYVTMPPIFLPKQFNARLPIKKTTAQQLFLY 308