BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00020375
         (705 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_009409939.1 PREDICTED: pentatricopeptide repeat-containing pr...   112   6e-25
XP_006850196.1 PREDICTED: pentatricopeptide repeat-containing pr...   111   2e-24
XP_016580018.1 PREDICTED: pentatricopeptide repeat-containing pr...   110   5e-24
5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide ...   108   6e-24
XP_004298524.1 PREDICTED: pentatricopeptide repeat-containing pr...   109   6e-24
5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide ...   108   8e-24
XP_015622973.1 PREDICTED: pentatricopeptide repeat-containing pr...   109   1e-23
BAS76780.1 Os02g0127600 [Oryza sativa Japonica Group]                 109   1e-23
5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide ...   107   3e-23
5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide ...   107   3e-23
4WSL_A Chain A, Crystal Structure Of Designed Cppr-polyc Protein      104   3e-23
XP_006648271.1 PREDICTED: pentatricopeptide repeat-containing pr...   107   4e-23
EEC72399.1 hypothetical protein OsI_05688 [Oryza sativa Indica G...   106   8e-23
XP_004243929.1 PREDICTED: pentatricopeptide repeat-containing pr...   106   9e-23
XP_008788703.1 PREDICTED: pentatricopeptide repeat-containing pr...   106   1e-22
XP_015082752.1 PREDICTED: pentatricopeptide repeat-containing pr...   105   2e-22
4PJR_A Chain A, Crystal Structure Of Designed Cppr-nre Protein        102   2e-22
ONK72173.1 uncharacterized protein A4U43_C04F16540 [Asparagus of...   104   3e-22
XP_010685775.1 PREDICTED: putative pentatricopeptide repeat-cont...   103   4e-22
XP_011460962.1 PREDICTED: putative pentatricopeptide repeat-cont...   104   5e-22

>XP_009409939.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71210
            [Musa acuminata subsp. malaccensis] XP_018684949.1
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g71210 [Musa acuminata subsp. malaccensis]
          Length = 923

 Score =  112 bits (281), Expect = 6e-25
 Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 8/198 (4%)
 Frame = +3

Query: 9    KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
            KG +P+L  YE L+  L   K++ + +++ ED KQ GRP   F+  VLL    +  D+  
Sbjct: 726  KGFIPSLQCYEDLVLELSSNKDYDIVVKVIEDFKQTGRPVSAFLCNVLLLHTLKSQDLLR 785

Query: 189  AWHIFEDMC--------VQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNI 344
            AW    +           Q S G   +L   + G S    ++ G++ L+ L +  F  +I
Sbjct: 786  AWAQTREKSNAVAVSGETQVSEG--SMLGHLIAGFSGGIRMKDGVDKLDELIERFFPVDI 843

Query: 345  INYNLLLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDE 524
              YN+LL+ +    +++ A D+F R+P KG   N WT+DI++ GFC+ G+  +A+  ++ 
Sbjct: 844  YTYNMLLRGMSMAGRMDYACDLFHRIPKKGFKPNRWTFDIIVHGFCKQGKRKEAERWMEA 903

Query: 525  MIKKGFQPSRATYNFFTS 578
            M + GF P+  T   + +
Sbjct: 904  MHQNGFHPNWYTMRIYNN 921


>XP_006850196.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71210
            [Amborella trichopoda] ERN11777.1 hypothetical protein
            AMTR_s00022p00248730 [Amborella trichopoda]
          Length = 897

 Score =  111 bits (277), Expect = 2e-24
 Identities = 59/197 (29%), Positives = 105/197 (53%), Gaps = 3/197 (1%)
 Frame = +3

Query: 9    KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
            +GL+P+L  YE L+ +LC  + + + +++ +D ++ GR    ++Y +LL    +  ++  
Sbjct: 698  RGLIPSLTCYEELVHMLCCSENYEMVIKVVKDFEETGRHVSIYMYNILLCHILKSQELIK 757

Query: 189  AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
            AW       V  S     +L   V    + + LE  +++ E L +     NI+ YN++L+
Sbjct: 758  AWL---RSGVDGSQSGNSVLGRLVGAFPNIQSLEDHLQNFEELIERRIHANIVTYNVVLR 814

Query: 369  CLFKERKLELASDVFS---RLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKG 539
             L K  ++E A  +FS   R   KGC  N WTYDI++ G C+ GRL DAK  +++M +  
Sbjct: 815  SLCKAGRVEAACTLFSIMCRNGKKGCEPNPWTYDIVVHGLCKVGRLRDAKFFMEKMFEMN 874

Query: 540  FQPSRATYNFFTSLTNK 590
            F P++ T + +  L  +
Sbjct: 875  FYPTKGTIDLYRFLATR 891


>XP_016580018.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71210
            [Capsicum annuum]
          Length = 891

 Score =  110 bits (274), Expect = 5e-24
 Identities = 66/185 (35%), Positives = 100/185 (54%)
 Frame = +3

Query: 15   LVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEMAW 194
            L P++  YE L+ LLC ++++  A+ + ED+ Q GR    FI  +LL    +   +  AW
Sbjct: 709  LKPSMECYEELVKLLCSRRDYYKAILLVEDLMQVGRRVSSFIGNLLLLHSLQTQSVFSAW 768

Query: 195  HIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLKCL 374
                D+   K      +L   +K  S   +LES +  +E L    F  ++  YNLLL+ L
Sbjct: 769  MHSRDLHNTKDQSL--VLGDLIKTFSGGSNLESDILQIEELIRQCFPLDVYTYNLLLRKL 826

Query: 375  FKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQPSR 554
                +++LA D F R  NKG   N WTYDIL++GF + GR S+A+  +DEM+ KG+  + 
Sbjct: 827  TIS-EMDLACDYFERFCNKGYEPNRWTYDILVRGFLQVGRFSEARRWMDEMLGKGYDLTE 885

Query: 555  ATYNF 569
            AT  F
Sbjct: 886  ATKTF 890


>5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8a2 In Complex With Its Target Rna U8a2
          Length = 460

 Score =  108 bits (271), Expect = 6e-24
 Identities = 59/186 (31%), Positives = 97/186 (52%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+ P + +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 150 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDE 209

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    PN++ YN L+ 
Sbjct: 210 ALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLID 269

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 270 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 329

Query: 549 SRATYN 566
              TYN
Sbjct: 330 DVVTYN 335



 Score =  108 bits (269), Expect = 1e-23
 Identities = 59/186 (31%), Positives = 97/186 (52%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+ P + +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 115 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDE 174

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    PN++ Y+ L+ 
Sbjct: 175 ALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLID 234

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   N+ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 235 GLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 294

Query: 549 SRATYN 566
              TYN
Sbjct: 295 DVVTYN 300



 Score =  106 bits (265), Expect = 4e-23
 Identities = 58/186 (31%), Positives = 97/186 (52%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+ P + +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 185 KGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDE 244

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 245 ALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 304

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 305 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 364

Query: 549 SRATYN 566
              TYN
Sbjct: 365 DVVTYN 370



 Score =  105 bits (261), Expect = 1e-22
 Identities = 57/186 (30%), Positives = 98/186 (52%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           +G+ PT+ +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 45  QGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDE 104

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 105 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 164

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY  LI G C+AG+L +A    +EM++KG +P
Sbjct: 165 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKP 224

Query: 549 SRATYN 566
           +  TY+
Sbjct: 225 NVVTYS 230



 Score =  104 bits (260), Expect = 2e-22
 Identities = 57/185 (30%), Positives = 96/185 (51%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+ P + +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 220 KGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDE 279

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 280 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 339

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 340 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 399

Query: 549 SRATY 563
              TY
Sbjct: 400 DELTY 404



 Score = 90.1 bits (222), Expect = 3e-17
 Identities = 47/178 (26%), Positives = 90/178 (50%)
 Frame = +3

Query: 33  SYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEMAWHIFEDM 212
           +Y  ++  L +   +  AL ++ +++++G       Y  L+   C+ G ++ A  +FE+M
Sbjct: 18  AYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEM 77

Query: 213 CVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLKCLFKERKL 392
             +            + GL  A  L+  ++  E + +    P+++ YN L+  L K  KL
Sbjct: 78  VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 137

Query: 393 ELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQPSRATYN 566
           + A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P   TY+
Sbjct: 138 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYS 195


>XP_004298524.1 PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 605

 Score =  109 bits (273), Expect = 6e-24
 Identities = 61/186 (32%), Positives = 98/186 (52%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG +  + S+  LI   CK K+   A +I++ M  KG       Y  L+   C+ G ++ 
Sbjct: 360 KGFLVDVQSFNILINGYCKSKKIDKAYKIFKQMPLKGLVPDTITYTTLIDGFCKAGRLQE 419

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +F +M             I + GL + + L   +E L  +      PNI+ YN++++
Sbjct: 420 AEKLFSEMQDYGQLPNIRTYIIILDGLCNNQQLSEAIELLREMEGNKLKPNIVAYNIIIE 479

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            LFK  K+E A+DVFS L +KG + ++WTY+I+I+G C  G L++A+    EM +KG   
Sbjct: 480 ALFKAGKIESATDVFSGLSSKGVLPDVWTYNIMIKGLCNGGILAEAEKLFREMEEKGCSA 539

Query: 549 SRATYN 566
           +  TYN
Sbjct: 540 NGCTYN 545



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 4/189 (2%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           +G+ P + +Y  LI  +C    +  A R+  +M  +G     F + +L+   C++G +  
Sbjct: 255 RGIAPNVVTYTSLIQGVCNIGHWKEATRLLYEMASQGFFPDVFTFSILVDALCKDGMVVQ 314

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDI----SFGPNIINYN 356
           A  + + M +Q+     +   I    L D   L   M+  + + D+     F  ++ ++N
Sbjct: 315 AKSVVQIM-IQRG---IEPDTITYSSLMDGHCLRGEMDKAKQVFDLMVTKGFLVDVQSFN 370

Query: 357 LLLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKK 536
           +L+    K +K++ A  +F ++P KG + +  TY  LI GFC+AGRL +A+    EM   
Sbjct: 371 ILINGYCKSKKIDKAYKIFKQMPLKGLVPDTITYTTLIDGFCKAGRLQEAEKLFSEMQDY 430

Query: 537 GFQPSRATY 563
           G  P+  TY
Sbjct: 431 GQLPNIRTY 439


>5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8c2 In Complex With Its Target Rna U8c2
          Length = 460

 Score =  108 bits (270), Expect = 8e-24
 Identities = 59/186 (31%), Positives = 99/186 (53%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           +G+ PT+ +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 45  QGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDE 104

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 105 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 164

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 165 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 224

Query: 549 SRATYN 566
           S  TYN
Sbjct: 225 SVVTYN 230



 Score =  107 bits (267), Expect = 2e-23
 Identities = 59/186 (31%), Positives = 98/186 (52%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+ P + +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 80  KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDE 139

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 140 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 199

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 200 GLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 259

Query: 549 SRATYN 566
           S  TYN
Sbjct: 260 SVVTYN 265



 Score =  107 bits (266), Expect = 3e-23
 Identities = 58/186 (31%), Positives = 97/186 (52%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+ P + +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 185 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDE 244

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 245 ALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 304

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 305 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 364

Query: 549 SRATYN 566
              TYN
Sbjct: 365 DVVTYN 370



 Score =  106 bits (264), Expect = 5e-23
 Identities = 58/186 (31%), Positives = 97/186 (52%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+ P + +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 150 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDE 209

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 210 ALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLID 269

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 270 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 329

Query: 549 SRATYN 566
              TYN
Sbjct: 330 DVVTYN 335



 Score =  105 bits (263), Expect = 7e-23
 Identities = 58/186 (31%), Positives = 97/186 (52%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+ P + +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 115 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDE 174

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 175 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLID 234

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 235 GLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 294

Query: 549 SRATYN 566
              TYN
Sbjct: 295 DVVTYN 300



 Score =  105 bits (263), Expect = 7e-23
 Identities = 57/185 (30%), Positives = 97/185 (52%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+ P++ +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 220 KGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDE 279

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 280 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 339

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 340 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 399

Query: 549 SRATY 563
              TY
Sbjct: 400 DELTY 404



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 36/100 (36%), Positives = 53/100 (53%)
 Frame = +3

Query: 267 LSDAKHLESGMESLEYLTDISFGPNIINYNLLLKCLFKERKLELASDVFSRLPNKGCIAN 446
           LS A   E  +E    L      P ++ YN L+  L K  KL+ A  +F  +  KG   +
Sbjct: 26  LSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 85

Query: 447 MWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQPSRATYN 566
           + TY+ LI G C+AG+L +A    +EM++KG +P   TYN
Sbjct: 86  VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYN 125



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 26/72 (36%), Positives = 42/72 (58%)
 Frame = +3

Query: 351 YNLLLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMI 530
           Y  +L  L +  + E A ++F+ L  +G    + TY+ LI G C+AG+L +A    +EM+
Sbjct: 19  YTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMV 78

Query: 531 KKGFQPSRATYN 566
           +KG +P   TYN
Sbjct: 79  EKGIKPDVVTYN 90


>XP_015622973.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71210
            [Oryza sativa Japonica Group] BAD08027.1 putative
            pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
          Length = 903

 Score =  109 bits (272), Expect = 1e-23
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 9/200 (4%)
 Frame = +3

Query: 9    KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
            KGLVP++  YE+L+ LLC  K++   +++ +D K+ GRP   F+  VLL    R  D+  
Sbjct: 695  KGLVPSISCYEQLVLLLCSVKDYDNVVKVIDDFKETGRPVSAFLCNVLLLHTLRGSDLLK 754

Query: 189  AWHIFEDMCVQ------KSNGYF---DILPIFVKGLSDAKHLESGMESLEYLTDISFGPN 341
            AW   E   V+      K  G F   +++ +F  G+ +   LE   E LE      F  +
Sbjct: 755  AWKRSEQATVKPEEIQGKGVGRFLIGELIMMFAGGIRNMNDLEDLEEDLEK----HFPVD 810

Query: 342  IINYNLLLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLD 521
            +  YN+LL+ L    +++ A ++F RL  KG   N WT+DI++ GFC+     +A+  ++
Sbjct: 811  VYTYNMLLRGLSMVGRMDSACNLFERLCRKGYEPNRWTFDIMVHGFCKNSDRDEAERWME 870

Query: 522  EMIKKGFQPSRATYNFFTSL 581
             M + GF P+  T   + +L
Sbjct: 871  AMHRNGFYPTWYTMRIYNNL 890


>BAS76780.1 Os02g0127600 [Oryza sativa Japonica Group]
          Length = 975

 Score =  109 bits (272), Expect = 1e-23
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 9/200 (4%)
 Frame = +3

Query: 9    KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
            KGLVP++  YE+L+ LLC  K++   +++ +D K+ GRP   F+  VLL    R  D+  
Sbjct: 767  KGLVPSISCYEQLVLLLCSVKDYDNVVKVIDDFKETGRPVSAFLCNVLLLHTLRGSDLLK 826

Query: 189  AWHIFEDMCVQ------KSNGYF---DILPIFVKGLSDAKHLESGMESLEYLTDISFGPN 341
            AW   E   V+      K  G F   +++ +F  G+ +   LE   E LE      F  +
Sbjct: 827  AWKRSEQATVKPEEIQGKGVGRFLIGELIMMFAGGIRNMNDLEDLEEDLEK----HFPVD 882

Query: 342  IINYNLLLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLD 521
            +  YN+LL+ L    +++ A ++F RL  KG   N WT+DI++ GFC+     +A+  ++
Sbjct: 883  VYTYNMLLRGLSMVGRMDSACNLFERLCRKGYEPNRWTFDIMVHGFCKNSDRDEAERWME 942

Query: 522  EMIKKGFQPSRATYNFFTSL 581
             M + GF P+  T   + +L
Sbjct: 943  AMHRNGFYPTWYTMRIYNNL 962


>5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8g2 In Complex With Its Target Rna U8g2
          Length = 460

 Score =  107 bits (266), Expect = 3e-23
 Identities = 58/186 (31%), Positives = 97/186 (52%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+ P + +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 150 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDE 209

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 210 ALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 269

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 270 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 329

Query: 549 SRATYN 566
              TYN
Sbjct: 330 DVVTYN 335



 Score =  106 bits (264), Expect = 5e-23
 Identities = 58/186 (31%), Positives = 97/186 (52%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+ P + +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 185 KGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDE 244

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 245 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 304

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 305 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 364

Query: 549 SRATYN 566
              TYN
Sbjct: 365 DVVTYN 370



 Score =  103 bits (258), Expect = 4e-22
 Identities = 57/185 (30%), Positives = 96/185 (51%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           +G+ PT+ +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 45  QGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDE 104

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 105 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 164

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY  LI G C+AG+L +A    +EM++KG +P
Sbjct: 165 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKP 224

Query: 549 SRATY 563
              TY
Sbjct: 225 DVVTY 229



 Score =  103 bits (258), Expect = 4e-22
 Identities = 57/185 (30%), Positives = 96/185 (51%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+ P + +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 220 KGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDE 279

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 280 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 339

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 340 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 399

Query: 549 SRATY 563
              TY
Sbjct: 400 DELTY 404



 Score = 89.7 bits (221), Expect = 4e-17
 Identities = 47/177 (26%), Positives = 89/177 (50%)
 Frame = +3

Query: 33  SYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEMAWHIFEDM 212
           +Y  ++  L +   +  AL ++ +++++G       Y  L+   C+ G ++ A  +FE+M
Sbjct: 18  AYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEM 77

Query: 213 CVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLKCLFKERKL 392
             +            + GL  A  L+  ++  E + +    P+++ YN L+  L K  KL
Sbjct: 78  VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 137

Query: 393 ELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQPSRATY 563
           + A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P   TY
Sbjct: 138 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 194



 Score = 77.4 bits (189), Expect = 8e-13
 Identities = 43/142 (30%), Positives = 70/142 (49%)
 Frame = +3

Query: 141 YIVLLQECCREGDIEMAWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLT 320
           Y  +L    R G  E A  +F ++  Q            + GL  A  L+  ++  E + 
Sbjct: 19  YTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMV 78

Query: 321 DISFGPNIINYNLLLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLS 500
           +    P+++ YN L+  L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L 
Sbjct: 79  EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLD 138

Query: 501 DAKSKLDEMIKKGFQPSRATYN 566
           +A    +EM++KG +P   TYN
Sbjct: 139 EALKLFEEMVEKGIKPDVVTYN 160


>5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U10 In Complex With Its Target Rna U10
          Length = 460

 Score =  107 bits (266), Expect = 3e-23
 Identities = 58/186 (31%), Positives = 98/186 (52%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           +G+ PT+ +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 45  QGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDE 104

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 105 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 164

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 165 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 224

Query: 549 SRATYN 566
              TYN
Sbjct: 225 DVVTYN 230



 Score =  105 bits (263), Expect = 7e-23
 Identities = 58/186 (31%), Positives = 97/186 (52%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+ P + +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 80  KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDE 139

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 140 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 199

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 200 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 259

Query: 549 SRATYN 566
              TYN
Sbjct: 260 DVVTYN 265



 Score =  105 bits (263), Expect = 7e-23
 Identities = 58/186 (31%), Positives = 97/186 (52%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+ P + +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 115 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDE 174

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 175 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 234

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 235 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 294

Query: 549 SRATYN 566
              TYN
Sbjct: 295 DVVTYN 300



 Score =  105 bits (263), Expect = 7e-23
 Identities = 58/186 (31%), Positives = 97/186 (52%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+ P + +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 150 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDE 209

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 210 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 269

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 270 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 329

Query: 549 SRATYN 566
              TYN
Sbjct: 330 DVVTYN 335



 Score =  105 bits (263), Expect = 7e-23
 Identities = 58/186 (31%), Positives = 97/186 (52%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+ P + +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 185 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDE 244

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 245 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 304

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 305 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 364

Query: 549 SRATYN 566
              TYN
Sbjct: 365 DVVTYN 370



 Score =  104 bits (259), Expect = 3e-22
 Identities = 57/185 (30%), Positives = 96/185 (51%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+ P + +Y  LI  LCK  +   AL+++E+M +KG       Y  L+   C+ G ++ 
Sbjct: 220 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDE 279

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +FE+M  +            + GL  A  L+  ++  E + +    P+++ YN L+ 
Sbjct: 280 ALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 339

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L K  KL+ A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P
Sbjct: 340 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 399

Query: 549 SRATY 563
              TY
Sbjct: 400 DELTY 404



 Score = 92.0 bits (227), Expect = 6e-18
 Identities = 48/178 (26%), Positives = 90/178 (50%)
 Frame = +3

Query: 33  SYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEMAWHIFEDM 212
           +Y  ++  L +   +  AL ++ +++++G       Y  L+   C+ G ++ A  +FE+M
Sbjct: 18  AYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEM 77

Query: 213 CVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLKCLFKERKL 392
             +            + GL  A  L+  ++  E + +    P+++ YN L+  L K  KL
Sbjct: 78  VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 137

Query: 393 ELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQPSRATYN 566
           + A  +F  +  KG   ++ TY+ LI G C+AG+L +A    +EM++KG +P   TYN
Sbjct: 138 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYN 195


>4WSL_A Chain A, Crystal Structure Of Designed Cppr-polyc Protein
          Length = 303

 Score =  104 bits (260), Expect = 3e-23
 Identities = 65/193 (33%), Positives = 100/193 (51%), Gaps = 3/193 (1%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+VP++ +Y  LI  L K      AL ++E+MK+KG       Y  L+    + G +E 
Sbjct: 32  KGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEE 91

Query: 189 AWHIFEDMCVQKSNGYFDILPIF---VKGLSDAKHLESGMESLEYLTDISFGPNIINYNL 359
           A  +FE+M   K  G    +  +   + GL  A  LE  +E  E + +    P+++ YN 
Sbjct: 92  ALELFEEM---KEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNT 148

Query: 360 LLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKG 539
           L+  L K  +LE A ++F  +  KG + ++ TY+ LI G  +AGRL +A    +EM +KG
Sbjct: 149 LISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKG 208

Query: 540 FQPSRATYNFFTS 578
             PS  TYN   S
Sbjct: 209 IVPSVVTYNTLIS 221



 Score =  104 bits (260), Expect = 3e-23
 Identities = 65/193 (33%), Positives = 100/193 (51%), Gaps = 3/193 (1%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+VP++ +Y  LI  L K      AL ++E+MK+KG       Y  L+    + G +E 
Sbjct: 67  KGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEE 126

Query: 189 AWHIFEDMCVQKSNGYFDILPIF---VKGLSDAKHLESGMESLEYLTDISFGPNIINYNL 359
           A  +FE+M   K  G    +  +   + GL  A  LE  +E  E + +    P+++ YN 
Sbjct: 127 ALELFEEM---KEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNT 183

Query: 360 LLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKG 539
           L+  L K  +LE A ++F  +  KG + ++ TY+ LI G  +AGRL +A    +EM +KG
Sbjct: 184 LISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKG 243

Query: 540 FQPSRATYNFFTS 578
             PS  TYN   S
Sbjct: 244 IVPSVVTYNTLIS 256



 Score =  104 bits (260), Expect = 3e-23
 Identities = 65/193 (33%), Positives = 100/193 (51%), Gaps = 3/193 (1%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+VP++ +Y  LI  L K      AL ++E+MK+KG       Y  L+    + G +E 
Sbjct: 102 KGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEE 161

Query: 189 AWHIFEDMCVQKSNGYFDILPIF---VKGLSDAKHLESGMESLEYLTDISFGPNIINYNL 359
           A  +FE+M   K  G    +  +   + GL  A  LE  +E  E + +    P+++ YN 
Sbjct: 162 ALELFEEM---KEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNT 218

Query: 360 LLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKG 539
           L+  L K  +LE A ++F  +  KG + ++ TY+ LI G  +AGRL +A    +EM +KG
Sbjct: 219 LISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKG 278

Query: 540 FQPSRATYNFFTS 578
             PS  TYN   S
Sbjct: 279 IVPSVVTYNTLIS 291



 Score = 95.9 bits (237), Expect = 6e-20
 Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 3/185 (1%)
 Frame = +3

Query: 33  SYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEMAWHIFEDM 212
           +Y  LI  L K      AL ++E+MK+KG       Y  L+    + G +E A  +FE+M
Sbjct: 5   TYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEM 64

Query: 213 CVQKSNGYFDILPIF---VKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLKCLFKE 383
              K  G    +  +   + GL  A  LE  +E  E + +    P+++ YN L+  L K 
Sbjct: 65  ---KEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKA 121

Query: 384 RKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQPSRATY 563
            +LE A ++F  +  KG + ++ TY+ LI G  +AGRL +A    +EM +KG  PS  TY
Sbjct: 122 GRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTY 181

Query: 564 NFFTS 578
           N   S
Sbjct: 182 NTLIS 186



 Score = 82.8 bits (203), Expect = 4e-15
 Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 3/164 (1%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+VP++ +Y  LI  L K      AL ++E+MK+KG       Y  L+    + G +E 
Sbjct: 137 KGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEE 196

Query: 189 AWHIFEDMCVQKSNGYFDILPIF---VKGLSDAKHLESGMESLEYLTDISFGPNIINYNL 359
           A  +FE+M   K  G    +  +   + GL  A  LE  +E  E + +    P+++ YN 
Sbjct: 197 ALELFEEM---KEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNT 253

Query: 360 LLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAG 491
           L+  L K  +LE A ++F  +  KG + ++ TY+ LI G  +AG
Sbjct: 254 LISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAG 297



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 32/80 (40%), Positives = 46/80 (57%)
 Frame = +3

Query: 339 NIINYNLLLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKL 518
           N + YN L+  L K  +LE A ++F  +  KG + ++ TY+ LI G  +AGRL +A    
Sbjct: 2   NSVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELF 61

Query: 519 DEMIKKGFQPSRATYNFFTS 578
           +EM +KG  PS  TYN   S
Sbjct: 62  EEMKEKGIVPSVVTYNTLIS 81


>XP_006648271.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71210,
            partial [Oryza brachyantha]
          Length = 784

 Score =  107 bits (267), Expect = 4e-23
 Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 13/216 (6%)
 Frame = +3

Query: 9    KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
            KGLVP++  YE+L+ LLC  +++   ++I +D ++ GRP   F+   LL    R GD+  
Sbjct: 572  KGLVPSISCYEQLVLLLCSVRDYDNVIKIIDDFRKTGRPVSAFLCNALLLHTLRGGDLLK 631

Query: 189  AWHIFEDMCVQ----------KSNGYF---DILPIFVKGLSDAKHLESGMESLEYLTDIS 329
            AW    D   +          K  G F   +++ +F  G+ +   LE   E LE      
Sbjct: 632  AWKRSRDQSEKATVKPEEIQGKGVGRFLIGELVMMFANGIRNMNDLEDLEEDLEK----H 687

Query: 330  FGPNIINYNLLLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAK 509
            F  ++  YN+LL+ L    +++ A ++F +L  KG   N WT+DI+I G+C+ G   +A+
Sbjct: 688  FPVDVYTYNMLLRGLSMVGRMDSACNLFEKLCRKGYEPNRWTFDIMIHGYCKNGDRDEAE 747

Query: 510  SKLDEMIKKGFQPSRATYNFFTSLTNKYSNKNCPKF 617
              ++ M + GF P+  T   + +L  + +++    F
Sbjct: 748  RWMEAMHRNGFYPTWYTMRLYNNLALRANDRKAISF 783


>EEC72399.1 hypothetical protein OsI_05688 [Oryza sativa Indica Group]
          Length = 831

 Score =  106 bits (265), Expect = 8e-23
 Identities = 62/190 (32%), Positives = 101/190 (53%), Gaps = 9/190 (4%)
 Frame = +3

Query: 9    KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
            KGLVP++  YE+L+ LLC  K++   +++ +D K+ GRP   F+  VLL    R  D+  
Sbjct: 623  KGLVPSISCYEQLVLLLCSVKDYDNVVKVIDDFKETGRPVSAFLCNVLLLHTLRGSDLLK 682

Query: 189  AWHIFEDMCVQ------KSNGYF---DILPIFVKGLSDAKHLESGMESLEYLTDISFGPN 341
            AW   E   V+      K  G F   +++ +F  G+ +   LE   E LE      F  +
Sbjct: 683  AWKRSEQATVKPEEIQGKGVGRFLIGELIMMFAGGIRNMNDLEDLEEDLEK----HFPVD 738

Query: 342  IINYNLLLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLD 521
            +  YN+LL+ L    +++ A ++F RL  KG   N WT+DI++ GFC+     +A+  ++
Sbjct: 739  VYTYNMLLRGLSMVGRMDSACNLFERLCRKGYEPNRWTFDIMVHGFCKNSDRDEAERWME 798

Query: 522  EMIKKGFQPS 551
             M + GF P+
Sbjct: 799  AMHRNGFYPT 808


>XP_004243929.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71210
            [Solanum lycopersicum] XP_010323990.1 PREDICTED:
            pentatricopeptide repeat-containing protein At1g71210
            [Solanum lycopersicum] XP_010323991.1 PREDICTED:
            pentatricopeptide repeat-containing protein At1g71210
            [Solanum lycopersicum]
          Length = 896

 Score =  106 bits (265), Expect = 9e-23
 Identities = 68/185 (36%), Positives = 96/185 (51%)
 Frame = +3

Query: 15   LVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEMAW 194
            L P++  YE L+ LLC  +++  A+ + ED+ Q GR    FI  VLL    +   +  AW
Sbjct: 714  LRPSMECYEELVKLLCSHRDYYKAILLVEDLMQVGRQVSSFIGNVLLLHSLQTHRVFSAW 773

Query: 195  HIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLKCL 374
                D+   K N     L   +K  S    LES +  +E L    F  +I  YNLLL+ L
Sbjct: 774  MHSRDLSNTKDNSL--ALGDLIKTFSGGSDLESDILQIEELIRQCFPLDIYTYNLLLRKL 831

Query: 375  FKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQPSR 554
                +++LA   F RL  KG   N WTYDIL+ GF + GR S+A+  ++EM  KGF  + 
Sbjct: 832  TIS-EMDLACSYFERLCKKGYEPNRWTYDILVHGFLKVGRSSEARRWMEEMFSKGFDLTE 890

Query: 555  ATYNF 569
            AT +F
Sbjct: 891  ATKSF 895


>XP_008788703.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71210
            [Phoenix dactylifera] XP_008788704.1 PREDICTED:
            pentatricopeptide repeat-containing protein At1g71210
            [Phoenix dactylifera]
          Length = 916

 Score =  106 bits (264), Expect = 1e-22
 Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
 Frame = +3

Query: 9    KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
            KGL+P+L  YE L+  LC  K++ +A+++ ED  + GRP   FI  VLL    +  ++  
Sbjct: 716  KGLIPSLQCYEELVLRLCSAKDYDVAVKVLEDFSETGRPVSAFICNVLLLHTLKSQELLR 775

Query: 189  AWHIFEDMCVQ-KSNGYFD--------ILPIFVKGLSDAKHLESGMESLEYLTDISFGPN 341
            AW    +   + K+ G  +        +L   +   S    +   M+ +E L +  F  +
Sbjct: 776  AWVRSRNRNSEVKAGGMSEETKGAGQIMLGNLIAAFSGGIRMRENMDKMEELVERFFPVD 835

Query: 342  IINYNLLLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLD 521
            I  YN+LL+ L    +++ A D+F R+  KG   N +++DI++ GFC+ G+  +A+  +D
Sbjct: 836  IYTYNMLLRGLSMAGRMDYACDLFQRISKKGYEPNRFSFDIIVHGFCKHGKRKEAERWMD 895

Query: 522  EMIKKGFQPSRATYNFFTS 578
             M + GF P+  T   + +
Sbjct: 896  AMYRHGFHPTWYTIRIYNN 914


>XP_015082752.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71210
            [Solanum pennellii] XP_015082753.1 PREDICTED:
            pentatricopeptide repeat-containing protein At1g71210
            [Solanum pennellii] XP_015082754.1 PREDICTED:
            pentatricopeptide repeat-containing protein At1g71210
            [Solanum pennellii]
          Length = 896

 Score =  105 bits (263), Expect = 2e-22
 Identities = 68/185 (36%), Positives = 95/185 (51%)
 Frame = +3

Query: 15   LVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEMAW 194
            L P++  YE L+ LLC  +++  A+ + ED+ Q GR    FI  VLL    +   +  AW
Sbjct: 714  LRPSMECYEELVKLLCSHRDYYKAVLLVEDLMQVGRQVSSFIGNVLLLHSLQTHRVFSAW 773

Query: 195  HIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLKCL 374
                D+   K N     L   +K  S    LES +  +E L    F  +I  YNLLL+ L
Sbjct: 774  MHSRDLSNTKDNSL--ALGDLIKTFSGGSDLESDILQIEELIRQCFPLDIYTYNLLLRKL 831

Query: 375  FKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQPSR 554
                +++LA   F RL  KG   N WTYDIL+ GF + GR S+A+  ++EM  KGF  + 
Sbjct: 832  TIS-EMDLACSYFERLCKKGYEPNRWTYDILVHGFLKVGRSSEARRWMEEMFSKGFDLTE 890

Query: 555  ATYNF 569
            AT  F
Sbjct: 891  ATKTF 895


>4PJR_A Chain A, Crystal Structure Of Designed Cppr-nre Protein
          Length = 303

 Score =  102 bits (254), Expect = 2e-22
 Identities = 65/193 (33%), Positives = 98/193 (50%), Gaps = 3/193 (1%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+VP + +Y  LI  L K      AL ++E+MK+KG       Y  L+    + G +E 
Sbjct: 32  KGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYNTLISGLGKAGRLEE 91

Query: 189 AWHIFEDMCVQKSNGYFDILPIF---VKGLSDAKHLESGMESLEYLTDISFGPNIINYNL 359
           A  +FE+M   K  G    +  +   + GL  A  LE  +E  E + +    PN++ YN 
Sbjct: 92  ALELFEEM---KEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNT 148

Query: 360 LLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKG 539
           L+  L K  +LE A ++F  +  KG + ++ TY  LI G  +AGRL +A    +EM +KG
Sbjct: 149 LISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKG 208

Query: 540 FQPSRATYNFFTS 578
             P+  TYN   S
Sbjct: 209 IVPNVVTYNTLIS 221



 Score =  102 bits (254), Expect = 2e-22
 Identities = 65/193 (33%), Positives = 98/193 (50%), Gaps = 3/193 (1%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+VP + +Y  LI  L K      AL ++E+MK+KG       Y  L+    + G +E 
Sbjct: 102 KGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISGLGKAGRLEE 161

Query: 189 AWHIFEDMCVQKSNGYFDILPIF---VKGLSDAKHLESGMESLEYLTDISFGPNIINYNL 359
           A  +FE+M   K  G    +  +   + GL  A  LE  +E  E + +    PN++ YN 
Sbjct: 162 ALELFEEM---KEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNT 218

Query: 360 LLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKG 539
           L+  L K  +LE A ++F  +  KG + ++ TY  LI G  +AGRL +A    +EM +KG
Sbjct: 219 LISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKG 278

Query: 540 FQPSRATYNFFTS 578
             P+  TYN   S
Sbjct: 279 IVPNVVTYNTLIS 291



 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 60/185 (32%), Positives = 91/185 (49%), Gaps = 3/185 (1%)
 Frame = +3

Query: 33  SYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEMAWHIFEDM 212
           +Y  LI  L K      AL ++E+MK+KG       Y  L+    + G +E A  +FE+M
Sbjct: 5   TYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEM 64

Query: 213 CVQKSNGYF-DILP--IFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLKCLFKE 383
              K  G   D++     + GL  A  LE  +E  E + +    P+++ Y  L+  L K 
Sbjct: 65  ---KEKGIVPDVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKA 121

Query: 384 RKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQPSRATY 563
            +LE A ++F  +  KG + N+ TY+ LI G  +AGRL +A    +EM +KG  P   TY
Sbjct: 122 GRLEEALELFEEMKEKGIVPNVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTY 181

Query: 564 NFFTS 578
               S
Sbjct: 182 TTLIS 186



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 31/80 (38%), Positives = 44/80 (55%)
 Frame = +3

Query: 339 NIINYNLLLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKL 518
           N + YN L+  L K  +LE A ++F  +  KG + ++ TY  LI G  +AGRL +A    
Sbjct: 2   NSVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELF 61

Query: 519 DEMIKKGFQPSRATYNFFTS 578
           +EM +KG  P   TYN   S
Sbjct: 62  EEMKEKGIVPDVVTYNTLIS 81



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+VP + +Y  LI  L K      AL ++E+MK+KG       Y  L+    + G +E 
Sbjct: 172 KGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISGLGKAGRLEE 231

Query: 189 AWHIFEDMCVQKSNGYFDILPIF---VKGLSDAKHLESGMESLEYLTDISFGPNIINYNL 359
           A  +FE+M   K  G    +  +   + GL  A  LE  +E  E + +    PN++ YN 
Sbjct: 232 ALELFEEM---KEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNT 288

Query: 360 LLKCLFK 380
           L+  L K
Sbjct: 289 LISGLGK 295


>ONK72173.1 uncharacterized protein A4U43_C04F16540 [Asparagus officinalis]
          Length = 508

 Score =  104 bits (260), Expect = 3e-22
 Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 4/194 (2%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           KG+VP+L  YE L+  LC  +++   +++ ED  + GRP   FI  VLL    +  ++  
Sbjct: 315 KGMVPSLQCYEELVLALCSARDYDTVIKVLEDFWETGRPISAFICNVLLLHTLKGKELLR 374

Query: 189 AWHIFEDMCVQKSNGYFDILPI----FVKGLSDAKHLESGMESLEYLTDISFGPNIINYN 356
           AW  ++    + S G    L +     +   S    ++  + ++E   + SF  +I  YN
Sbjct: 375 AWVDYKK--AEGSRGGIAGLRLSLGEIIVAFSGGIRMKGDLNNVEEDIEKSFPVDIYTYN 432

Query: 357 LLLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKK 536
           +LL+ L    +++ A ++FSR+  KG   N+WTYDI++ GFC+     +A+S + EM + 
Sbjct: 433 MLLRGLSMAGRMDCACNLFSRIQKKGYQPNLWTYDIMVHGFCKQRNRKEAESWISEMYRN 492

Query: 537 GFQPSRATYNFFTS 578
           G+ P+  T   F +
Sbjct: 493 GYLPTMYTMKKFNN 506



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 50/232 (21%), Positives = 93/232 (40%), Gaps = 44/232 (18%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           +G  P   ++  L  +LC++++      + E  +++       +    +   C++G++E 
Sbjct: 62  EGYFPGKQAFSILANMLCREQKLNKLHELLEGARERAVKPTTAVLARCITTLCKQGELEK 121

Query: 189 AW---HIFEDMCVQKSN---------------GYFDILPIFVKGLSDAKH---------- 284
           AW   HIF    V+ S                G  D+LP  +  + ++ H          
Sbjct: 122 AWSIRHIFGGGDVELSRYSFVYTGLIRAFISLGKVDVLPELIIQMQESGHTPTRNLYLAV 181

Query: 285 ----------------LESGMESLEYLTDISFGPNIINYNLLLKCLFKERKLELASDVFS 416
                           L   +E L   +DI        YN  +      ++LE+A +VFS
Sbjct: 182 VGSLCEMGKFEEVLGLLNKQLELLNKKSDIKESDMRTFYNYFIDGAAHVKRLEMAMEVFS 241

Query: 417 RLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQPSRATYNFF 572
           R+   G  A + T  IL++G+ ++GR+S+A       I +  +P+   YN F
Sbjct: 242 RMERSGVKATLDTKIILLRGYLKSGRISNAMDFFSH-IGREREPNTKLYNIF 292


>XP_010685775.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330 [Beta vulgaris subsp. vulgaris] KMT05259.1
           hypothetical protein BVRB_7g173990 [Beta vulgaris subsp.
           vulgaris]
          Length = 466

 Score =  103 bits (258), Expect = 4e-22
 Identities = 61/196 (31%), Positives = 104/196 (53%), Gaps = 3/196 (1%)
 Frame = +3

Query: 21  PTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEMAWHI 200
           PT + Y  LI  LC+ KE +LA ++ ++M ++       IY  L+    + G     + +
Sbjct: 221 PTSYVYASLIKGLCEIKELSLAFQLKDEMLERNIQVDSAIYTTLITGLFKVGRNNEVYVV 280

Query: 201 FEDMCVQKSNGYFDILPIF---VKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLKC 371
            E+M   KS G       +   + G    KH +  + SL  + + +F P++I+YN+L+K 
Sbjct: 281 LEEM---KSKGCIPDTATYNALIAGHCAEKHFDLALRSLNEMEEKTFKPDVISYNVLIKA 337

Query: 372 LFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQPS 551
            FKE K++ A D+F  +P +GC  ++ +Y I++QG     +L +    LDEMI KG+ P 
Sbjct: 338 YFKEGKIKEAIDLFEDMPRRGCKPDVVSYRIVVQGLLSGMQLKEVAFMLDEMIFKGYAPH 397

Query: 552 RATYNFFTSLTNKYSN 599
            AT + F +L ++  N
Sbjct: 398 HATVDKFMNLLHEQGN 413



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 1/183 (0%)
 Frame = +3

Query: 21  PTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEMAWHI 200
           P   +Y  +I     Q +   A  ++++M+ +G       +  L+   CR   +  A  +
Sbjct: 150 PDACTYNIMINACRVQDDMVGAWELFDEMRNRGIRPNEVTFSTLITGLCRSLKVNEALKL 209

Query: 201 FEDMC-VQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLKCLF 377
            +DM  V        +    +KGL + K L    +  + + + +   +   Y  L+  LF
Sbjct: 210 KKDMFKVYNVEPTSYVYASLIKGLCEIKELSLAFQLKDEMLERNIQVDSAIYTTLITGLF 269

Query: 378 KERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQPSRA 557
           K  +      V   + +KGCI +  TY+ LI G C       A   L+EM +K F+P   
Sbjct: 270 KVGRNNEVYVVLEEMKSKGCIPDTATYNALIAGHCAEKHFDLALRSLNEMEEKTFKPDVI 329

Query: 558 TYN 566
           +YN
Sbjct: 330 SYN 332


>XP_011460962.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial [Fragaria vesca subsp. vesca]
          Length = 605

 Score =  104 bits (259), Expect = 5e-22
 Identities = 61/189 (32%), Positives = 103/189 (54%), Gaps = 3/189 (1%)
 Frame = +3

Query: 6   AKGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIE 185
           AKG +  + S   LI   CKQK+   A  ++++M ++G       Y  L+   C+ G ++
Sbjct: 359 AKGSMVNVHSCSILINGYCKQKKIHEAKEVFDEMPRRGIVPNTITYSTLIDGFCKAGRLQ 418

Query: 186 MAWHIFEDMCVQ---KSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYN 356
            A  +F +M       SN  ++I+   + GL + + L   +E L  +      P+I+ YN
Sbjct: 419 EAEKLFSEMQASGQLPSNCTYNII---LDGLCNNQQLSKAIELLREMEANKLKPDIVAYN 475

Query: 357 LLLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKK 536
           ++++ LFK  K+E A+DVFS L +KG + ++WTY+I+I+G C+ G L +A+    EM +K
Sbjct: 476 IIIEALFKAGKIESATDVFSGLSSKGVLPHVWTYNIMIKGLCDGGILVEAEKLFREMEQK 535

Query: 537 GFQPSRATY 563
           G      TY
Sbjct: 536 GCSADGCTY 544



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 49/194 (25%), Positives = 85/194 (43%)
 Frame = +3

Query: 9   KGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIEM 188
           +G+VP   +Y  LI   CK      A +++ +M+  G+      Y ++L   C    +  
Sbjct: 395 RGIVPNTITYSTLIDGFCKAGRLQEAEKLFSEMQASGQLPSNCTYNIILDGLCNNQQLSK 454

Query: 189 AWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLLK 368
           A  +  +M   K         I ++ L  A  +ES  +    L+     P++  YN+++K
Sbjct: 455 AIELLREMEANKLKPDIVAYNIIIEALFKAGKIESATDVFSGLSSKGVLPHVWTYNIMIK 514

Query: 369 CLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQP 548
            L     L  A  +F  +  KGC A+  TY  +I+GF      S A S ++EM ++G   
Sbjct: 515 GLCDGGILVEAEKLFREMEQKGCSADGCTYYTIIRGFLNNNETSRATSLIEEMRERGISG 574

Query: 549 SRATYNFFTSLTNK 590
             +T  +   L +K
Sbjct: 575 DASTMEWIFDLLSK 588



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 48/187 (25%), Positives = 82/187 (43%)
 Frame = +3

Query: 6   AKGLVPTLWSYERLIFLLCKQKEFTLALRIYEDMKQKGRPACPFIYIVLLQECCREGDIE 185
           ++G+ P L ++  L+  LCK+     A  + + M Q+G       Y  L+   C  G+++
Sbjct: 289 SQGIFPDLITFNILVDGLCKEGRVVQARSVVQIMIQRGIEPNTITYSSLMDGHCLRGEMD 348

Query: 186 MAWHIFEDMCVQKSNGYFDILPIFVKGLSDAKHLESGMESLEYLTDISFGPNIINYNLLL 365
            A  +F+ M  + S        I + G    K +    E  + +      PN I Y+ L+
Sbjct: 349 EAKQVFDLMVAKGSMVNVHSCSILINGYCKQKKIHEAKEVFDEMPRRGIVPNTITYSTLI 408

Query: 366 KCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSKLDEMIKKGFQ 545
               K  +L+ A  +FS +   G + +  TY+I++ G C   +LS A   L EM     +
Sbjct: 409 DGFCKAGRLQEAEKLFSEMQASGQLPSNCTYNIILDGLCNNQQLSKAIELLREMEANKLK 468

Query: 546 PSRATYN 566
           P    YN
Sbjct: 469 PDIVAYN 475



 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 28/77 (36%), Positives = 46/77 (59%)
 Frame = +3

Query: 336 PNIINYNLLLKCLFKERKLELASDVFSRLPNKGCIANMWTYDILIQGFCEAGRLSDAKSK 515
           PNI+ YN ++  L K+  ++ A ++FS +  +G + ++ TY+ LIQG C  GR  +A   
Sbjct: 224 PNIVTYNTIIDSLGKDALVDQALNLFSEMVGRGIVPDVITYNSLIQGVCNIGRWKEAWRL 283

Query: 516 LDEMIKKGFQPSRATYN 566
           L+EM  +G  P   T+N
Sbjct: 284 LNEMASQGIFPDLITFN 300