BLASTX nr result
ID: Ephedra29_contig00020291
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00020291
(490 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_002519988.1 translation initiation factor 1 (chloroplast) [Ep... 111 3e-29
ANZ53608.1 translational initiation factor 1 (plastid) [Gnetum g... 100 4e-25
YP_002519750.1 translation initiation factor 1 [Gnetum parvifoli... 99 2e-24
YP_009193250.1 translation initiation factor 1 (chloroplast) [Gn... 99 3e-24
ANZ53674.1 translational initiation factor 1 (plastid) [Gnetum p... 97 2e-23
YP_001876611.1 translational initiation factor 1 [Welwitschia mi... 83 4e-18
BAH11194.1 translation initiation factor 1 (chloroplast) [Welwit... 83 2e-17
YP_002519987.1 ribosomal protein L36 (chloroplast) [Ephedra equi... 79 9e-17
YP_009057692.1 translational initiation factor 1 (chloroplast) [... 77 8e-16
YP_008965144.1 translation initiation factor 1 (chloroplast) [Na... 77 8e-16
YP_009020370.1 translational initiation factor 1 (chloroplast) [... 74 1e-14
AJF42204.1 translation initiation factor 1, partial (chloroplast... 74 1e-14
YP_001876610.1 ribosomal protein L36 [Welwitschia mirabilis] B2Y... 73 2e-14
AJF43825.1 translation initiation factor 1 (chloroplast) [Arauca... 74 2e-14
AJF43255.1 translation initiation factor 1 (chloroplast) [Arauca... 74 2e-14
AJF42923.1 translation initiation factor 1 (chloroplast) [Arauca... 74 2e-14
YP_008965065.1 translation initiation factor 1 (chloroplast) [Ag... 74 2e-14
YP_008854545.1 translational initiation factor 1 [Ravenala madag... 73 3e-14
YP_007475558.1 InfA (chloroplast) [Podocarpus totara] AGE65854.1... 73 5e-14
YP_009241951.1 translational initiation factor 1 (plastid) [Sagi... 73 5e-14
>YP_002519988.1 translation initiation factor 1 (chloroplast) [Ephedra equisetina]
YP_009231456.1 translation initiation factor 1
(chloroplast) [Ephedra foeminea] BAH11356.1 translation
initiation factor 1 (chloroplast) [Ephedra equisetina]
ALV90171.1 translation initiation factor 1 (chloroplast)
[Ephedra foeminea]
Length = 77
Score = 111 bits (278), Expect = 3e-29
Identities = 55/55 (100%), Positives = 55/55 (100%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFRKS 165
GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFRKS
Sbjct: 23 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFRKS 77
>ANZ53608.1 translational initiation factor 1 (plastid) [Gnetum gnemon]
Length = 76
Score = 100 bits (250), Expect = 4e-25
Identities = 47/55 (85%), Positives = 53/55 (96%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFRKS 165
GFFRVLLDN+KT+LA ISGNIRQ SIRILVGDRVK+ELH+CDLT+GRIIHRFRK+
Sbjct: 20 GFFRVLLDNQKTILASISGNIRQKSIRILVGDRVKVELHICDLTRGRIIHRFRKT 74
>YP_002519750.1 translation initiation factor 1 [Gnetum parvifolium] YP_008082227.1
translation initiation factor 1 (chloroplast) [Gnetum
montanum] YP_009117877.1 translational initiation factor
1 (plastid) [Gnetum gnemon] BAH11260.1 translation
initiation factor 1 (chloroplast) [Gnetum parvifolium]
AGL11073.1 translation initiation factor 1 (chloroplast)
[Gnetum montanum] AJE71504.1 translational initiation
factor 1 (plastid) [Gnetum gnemon] ANZ53542.1
translational initiation factor 1 (plastid) [Gnetum
gnemon] ANZ53740.1 translational initiation factor 1
(plastid) [Gnetum parvifolium] ANZ53872.1 translational
initiation factor 1 (plastid) [Gnetum hainanense]
ANZ53938.1 translational initiation factor 1 (plastid)
[Gnetum hainanense] ANZ54004.1 translational initiation
factor 1 (plastid) [Gnetum montanum] ANZ54070.1
translational initiation factor 1 (plastid) [Gnetum
montanum] ANZ54136.1 translational initiation factor 1
(plastid) [Gnetum pendulum] ANZ54202.1 translational
initiation factor 1 (plastid) [Gnetum pendulum]
Length = 76
Score = 99.4 bits (246), Expect = 2e-24
Identities = 46/55 (83%), Positives = 53/55 (96%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFRKS 165
GFFRVLLDN++T+LA ISGNIRQ SIRILVGDRVK+ELH+CDLT+GRIIHRFRK+
Sbjct: 20 GFFRVLLDNQETILASISGNIRQKSIRILVGDRVKVELHICDLTRGRIIHRFRKA 74
>YP_009193250.1 translation initiation factor 1 (chloroplast) [Gnetum ula]
BAT70159.1 translation initiation factor 1 (chloroplast)
[Gnetum ula]
Length = 76
Score = 98.6 bits (244), Expect = 3e-24
Identities = 45/55 (81%), Positives = 52/55 (94%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFRKS 165
GFFRVLLDN++T+LAYISGNIRQ SIRILVGDRVK+ELH+CDLT+GRI HR RK+
Sbjct: 20 GFFRVLLDNQETILAYISGNIRQKSIRILVGDRVKVELHICDLTRGRITHRIRKA 74
>ANZ53674.1 translational initiation factor 1 (plastid) [Gnetum parvifolium]
ANZ53806.1 translational initiation factor 1 (plastid)
[Gnetum parvifolium]
Length = 76
Score = 96.7 bits (239), Expect = 2e-23
Identities = 45/55 (81%), Positives = 52/55 (94%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFRKS 165
G FRVLLDN++T+LA ISGNIRQ SIRILVGDRVK+ELH+CDLT+GRIIHRFRK+
Sbjct: 20 GVFRVLLDNQETILASISGNIRQKSIRILVGDRVKVELHICDLTRGRIIHRFRKA 74
>YP_001876611.1 translational initiation factor 1 [Welwitschia mirabilis]
ABY26824.1 translational initiation factor 1
(chloroplast) [Welwitschia mirabilis] AMA21077.1
translational initiation factor 1 (plastid) [Welwitschia
mirabilis]
Length = 79
Score = 83.2 bits (204), Expect = 4e-18
Identities = 39/54 (72%), Positives = 46/54 (85%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFRK 162
G F+VLLDN+KTVLAYISG IRQ I ILVGDRVK+E H+ DLT+GRI +RFR+
Sbjct: 22 GLFKVLLDNQKTVLAYISGKIRQKKILILVGDRVKVEFHISDLTRGRITYRFRE 75
>BAH11194.1 translation initiation factor 1 (chloroplast) [Welwitschia
mirabilis]
Length = 131
Score = 83.2 bits (204), Expect = 2e-17
Identities = 39/54 (72%), Positives = 46/54 (85%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFRK 162
G F+VLLDN+KTVLAYISG IRQ I ILVGDRVK+E H+ DLT+GRI +RFR+
Sbjct: 74 GLFKVLLDNQKTVLAYISGKIRQKKILILVGDRVKVEFHISDLTRGRITYRFRE 127
>YP_002519987.1 ribosomal protein L36 (chloroplast) [Ephedra equisetina]
YP_009231455.1 ribosomal protein L36 (chloroplast)
[Ephedra foeminea] BAH11355.1 ribosomal protein L36
(chloroplast) [Ephedra equisetina] ALV90170.1 ribosomal
protein L36 (chloroplast) [Ephedra foeminea]
Length = 37
Score = 78.6 bits (192), Expect = 9e-17
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +3
Query: 285 MKLRASVRKICSKCRLIRRGKRIYVVCLNLRHKQKQG 395
MKLRASVRKICSKCRLIRRGKRIYVVCLNLRHKQKQG
Sbjct: 1 MKLRASVRKICSKCRLIRRGKRIYVVCLNLRHKQKQG 37
>YP_009057692.1 translational initiation factor 1 (chloroplast) [Retrophyllum
piresii] AIC07432.1 translational initiation factor 1
(chloroplast) [Retrophyllum piresii]
Length = 83
Score = 77.4 bits (189), Expect = 8e-16
Identities = 37/53 (69%), Positives = 43/53 (81%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFR 159
G FRV LDN+ ++AYISG IRQNSIRIL GDRVK+EL DLTKGRI++R R
Sbjct: 21 GMFRVRLDNESDIIAYISGRIRQNSIRILPGDRVKVELSAYDLTKGRIVYRLR 73
>YP_008965144.1 translation initiation factor 1 (chloroplast) [Nageia nagi]
BAO19828.1 translation initiation factor 1 (chloroplast)
(chloroplast) [Nageia nagi]
Length = 83
Score = 77.4 bits (189), Expect = 8e-16
Identities = 37/53 (69%), Positives = 43/53 (81%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFR 159
G FRV LDN+ ++AYISG IRQNSIRIL GDRVK+EL DLTKGRI++R R
Sbjct: 21 GMFRVRLDNESDIIAYISGRIRQNSIRILPGDRVKVELSAYDLTKGRIVYRLR 73
>YP_009020370.1 translational initiation factor 1 (chloroplast) [Podocarpus
lambertii] AHL24809.1 translational initiation factor 1
(chloroplast) [Podocarpus lambertii]
Length = 83
Score = 74.3 bits (181), Expect = 1e-14
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFR 159
G FRV LDN+ ++AYISG IRQN IRIL GDRVK+EL DLT+GRI++R R
Sbjct: 21 GMFRVRLDNESEIIAYISGRIRQNCIRILPGDRVKVELSAYDLTRGRIVYRLR 73
>AJF42204.1 translation initiation factor 1, partial (chloroplast) [Araucaria
bernieri]
Length = 73
Score = 73.9 bits (180), Expect = 1e-14
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFR 159
G FRV LDN +LAYISG IRQNSIRIL GDRVK+EL DLT+GRI++R R
Sbjct: 11 GMFRVRLDNGCDILAYISGRIRQNSIRILPGDRVKVELSPYDLTRGRIVYRLR 63
>YP_001876610.1 ribosomal protein L36 [Welwitschia mirabilis] B2Y1Z3.1 RecName:
Full=50S ribosomal protein L36, chloroplastic ABY26823.1
ribosomal protein L36 (chloroplast) [Welwitschia
mirabilis] BAH11195.1 ribosomal protein L36
(chloroplast) [Welwitschia mirabilis] AMA21076.1
ribosomal protein L36 (plastid) [Welwitschia mirabilis]
Length = 37
Score = 72.8 bits (177), Expect = 2e-14
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +3
Query: 285 MKLRASVRKICSKCRLIRRGKRIYVVCLNLRHKQKQG 395
MKLRASVRKICSKCRLIRRGKR+YV C+N RHKQKQG
Sbjct: 1 MKLRASVRKICSKCRLIRRGKRLYVFCVNARHKQKQG 37
>AJF43825.1 translation initiation factor 1 (chloroplast) [Araucaria
humboldtensis]
Length = 83
Score = 73.9 bits (180), Expect = 2e-14
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFR 159
G FRV LDN +LAYISG IRQNSIRIL GDRVK+EL DLT+GRI++R R
Sbjct: 21 GMFRVRLDNGCDILAYISGRIRQNSIRILPGDRVKVELSPYDLTRGRIVYRLR 73
>AJF43255.1 translation initiation factor 1 (chloroplast) [Araucaria subulata]
Length = 83
Score = 73.9 bits (180), Expect = 2e-14
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFR 159
G FRV LDN +LAYISG IRQNSIRIL GDRVK+EL DLT+GRI++R R
Sbjct: 21 GMFRVRLDNGCDILAYISGRIRQNSIRILPGDRVKVELSPYDLTRGRIVYRLR 73
>AJF42923.1 translation initiation factor 1 (chloroplast) [Araucaria subulata]
Length = 83
Score = 73.9 bits (180), Expect = 2e-14
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFR 159
G FRV LDN +LAYISG IRQNSIRIL GDRVK+EL DLT+GRI++R R
Sbjct: 21 GMFRVRLDNGCDILAYISGRIRQNSIRILPGDRVKVELSPYDLTRGRIVYRLR 73
>YP_008965065.1 translation initiation factor 1 (chloroplast) [Agathis dammara]
YP_009121335.1 translation initiation factor 1 (plastid)
[Araucaria heterophylla] YP_009144081.1 translation
initiation factor 1 (chloroplast) [Wollemia nobilis]
BAO19749.1 translation initiation factor 1 (chloroplast)
(chloroplast) [Agathis dammara] AIW58379.1 translation
initiation factor 1 (plastid) [Araucaria heterophylla]
AJF41957.1 translation initiation factor 1 (chloroplast)
[Araucaria muelleri] AJF42037.1 translation initiation
factor 1 (chloroplast) [Araucaria scopulorum] AJF42120.1
translation initiation factor 1 (chloroplast) [Araucaria
muelleri] AJF42443.1 translation initiation factor 1
(chloroplast) [Araucaria columnaris] AJF42526.1
translation initiation factor 1 (chloroplast) [Araucaria
rulei] AJF42686.1 translation initiation factor 1
(chloroplast) [Araucaria columnaris] AJF42768.1
translation initiation factor 1 (chloroplast) [Araucaria
humboldtensis] AJF42850.1 translation initiation factor
1 (chloroplast) [Araucaria biramulata] AJF43012.1
translation initiation factor 1 (chloroplast) [Araucaria
columnaris] AJF43176.1 translation initiation factor 1
(chloroplast) [Araucaria muelleri] AJF43337.1
translation initiation factor 1 (chloroplast) [Araucaria
montana] AJF43419.1 translation initiation factor 1
(chloroplast) [Araucaria montana] AJF43501.1 translation
initiation factor 1 (chloroplast) [Araucaria
laubenfelsii] AJF43582.1 translation initiation factor 1
(chloroplast) [Araucaria schmidii] AJF43744.1
translation initiation factor 1 (chloroplast) [Araucaria
nemorosa] AJF43905.1 translation initiation factor 1
(chloroplast) [Araucaria bernieri] AKE36634.1
translation initiation factor 1 (chloroplast) [Wollemia
nobilis]
Length = 83
Score = 73.9 bits (180), Expect = 2e-14
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFR 159
G FRV LDN +LAYISG IRQNSIRIL GDRVK+EL DLT+GRI++R R
Sbjct: 21 GMFRVRLDNGCDILAYISGRIRQNSIRILPGDRVKVELSPYDLTRGRIVYRLR 73
>YP_008854545.1 translational initiation factor 1 [Ravenala madagascariensis]
AHA12634.1 translational initiation factor 1 (plastid)
[Ravenala madagascariensis]
Length = 80
Score = 73.2 bits (178), Expect = 3e-14
Identities = 38/51 (74%), Positives = 41/51 (80%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHR 153
G FRV LDN+ VL YISGNIR+N IRIL GDRVKIEL DLTKGRII+R
Sbjct: 19 GMFRVRLDNENIVLGYISGNIRRNFIRILPGDRVKIELSRYDLTKGRIIYR 69
>YP_007475558.1 InfA (chloroplast) [Podocarpus totara] AGE65854.1 InfA
(chloroplast) [Podocarpus totara]
Length = 83
Score = 72.8 bits (177), Expect = 5e-14
Identities = 34/53 (64%), Positives = 41/53 (77%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFR 159
G FRV LDN+ ++AYISG IRQN IRIL GDRVK+EL D T+GRI++R R
Sbjct: 21 GMFRVRLDNESEIIAYISGRIRQNCIRILPGDRVKVELSAYDFTRGRIVYRLR 73
>YP_009241951.1 translational initiation factor 1 (plastid) [Sagittaria
lichuanensis] AMQ13526.1 translational initiation factor
1 (plastid) [Sagittaria lichuanensis]
Length = 84
Score = 72.8 bits (177), Expect = 5e-14
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +1
Query: 1 GFFRVLLDNKKTVLAYISGNIRQNSIRILVGDRVKIELHVCDLTKGRIIHRFRKS 165
G FRV LDN +L YISG IR+N IRIL GDRVKIE+ DLTKGRII+R RK+
Sbjct: 22 GMFRVRLDNADLILGYISGKIRKNLIRILPGDRVKIEVSPYDLTKGRIIYRLRKN 76