BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00020121
         (238 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_015895364.1 PREDICTED: probable RNA-dependent RNA polymerase ...   116   1e-28
AAT38687.2 RNA-directed RNA polymerase, putative [Solanum demissum]   115   2e-28
AAT38751.2 RNA-directed RNA polymerase, putative [Solanum demissum]   115   2e-28
KZV22426.1 RNA-dependent RNA polymerase 1-like [Dorcoceras hygro...   115   3e-28
XP_019262401.1 PREDICTED: probable RNA-dependent RNA polymerase ...   114   6e-28
XP_010275353.1 PREDICTED: probable RNA-dependent RNA polymerase ...   114   6e-28
XP_016510714.1 PREDICTED: RNA-dependent RNA polymerase 1-like [N...   114   7e-28
XP_015076567.1 PREDICTED: probable RNA-dependent RNA polymerase ...   114   8e-28
NP_001234319.1 RNA-directed RNA polymerase [Solanum lycopersicum...   114   8e-28
XP_016466121.1 PREDICTED: probable RNA-dependent RNA polymerase ...   114   8e-28
XP_016466120.1 PREDICTED: probable RNA-dependent RNA polymerase ...   114   8e-28
XP_009781107.1 PREDICTED: probable RNA-dependent RNA polymerase ...   114   8e-28
XP_009623376.1 PREDICTED: probable RNA-dependent RNA polymerase ...   114   8e-28
CAA09697.1 RNA-directed RNA polymerase [Nicotiana tabacum]            114   8e-28
ABV24845.1 RNA-dependent RNA polymerase [Nicotiana glutinosa] AC...   114   8e-28
XP_015872918.1 PREDICTED: RNA-dependent RNA polymerase 1-like, p...   107   1e-27
KDO60789.1 hypothetical protein CISIN_1g0025861mg, partial [Citr...   110   1e-27
CAA09896.1 RNA-directed RNA polymerase, partial [Petunia x hybrida]   113   2e-27
XP_011075687.1 PREDICTED: probable RNA-dependent RNA polymerase ...   113   2e-27
XP_015160223.1 PREDICTED: probable RNA-dependent RNA polymerase ...   112   3e-27

>XP_015895364.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Ziziphus jujuba]
            XP_015895365.1 PREDICTED: probable RNA-dependent RNA
            polymerase 1 [Ziziphus jujuba]
          Length = 1119

 Score =  116 bits (291), Expect = 1e-28
 Identities = 55/78 (70%), Positives = 67/78 (85%)
 Frame = +1

Query: 1    LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
            +GII+  HTVFADS  + A+SD+CLKLA+LF++AVDFPKTGVPAKIP  L  +EYPDFME
Sbjct: 862  MGIIANAHTVFADSSMKKAKSDSCLKLAELFSIAVDFPKTGVPAKIPRRLRVKEYPDFME 921

Query: 181  KEDKPTYISRRVIGKLYR 234
            K DKPTY S++VIGKL+R
Sbjct: 922  KADKPTYESKQVIGKLFR 939


>AAT38687.2 RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1139

 Score =  115 bits (289), Expect = 2e-28
 Identities = 55/78 (70%), Positives = 65/78 (83%)
 Frame = +1

Query: 1    LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
            LGII+  H VFAD + +MA SD C KLA+LF++AVDFPKTGVPA+IPS L P+EYPDFM+
Sbjct: 881  LGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMD 940

Query: 181  KEDKPTYISRRVIGKLYR 234
            K DK TYIS RVIGKL+R
Sbjct: 941  KPDKTTYISERVIGKLFR 958


>AAT38751.2 RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1180

 Score =  115 bits (289), Expect = 2e-28
 Identities = 55/78 (70%), Positives = 65/78 (83%)
 Frame = +1

Query: 1    LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
            LGII+  H VFAD + +MA SD C KLA+LF++AVDFPKTGVPA+IPS L P+EYPDFM+
Sbjct: 922  LGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMD 981

Query: 181  KEDKPTYISRRVIGKLYR 234
            K DK TYIS RVIGKL+R
Sbjct: 982  KPDKTTYISERVIGKLFR 999


>KZV22426.1 RNA-dependent RNA polymerase 1-like [Dorcoceras hygrometricum]
          Length = 1110

 Score =  115 bits (288), Expect = 3e-28
 Identities = 56/79 (70%), Positives = 66/79 (83%)
 Frame = +1

Query: 1    LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
            LG+I+  HTVFAD +  MA SD CL+LA+LF++AVDFPKTGVPA+IP DL  +EYPDFME
Sbjct: 859  LGVIANAHTVFADKEPVMAMSDPCLQLAKLFSIAVDFPKTGVPAEIPPDLRVKEYPDFME 918

Query: 181  KEDKPTYISRRVIGKLYRA 237
            K DK TY S+RVIGKLYRA
Sbjct: 919  KPDKTTYESQRVIGKLYRA 937


>XP_019262401.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
            attenuata] XP_019262402.1 PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Nicotiana attenuata]
            OIT37821.1 rna-dependent rna polymerase 1 [Nicotiana
            attenuata]
          Length = 1115

 Score =  114 bits (286), Expect = 6e-28
 Identities = 54/78 (69%), Positives = 65/78 (83%)
 Frame = +1

Query: 1    LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
            LGII+  H VFAD + +MA SD C +LAQLF++AVDFPKTGVPA+IPS L P++YPDFME
Sbjct: 858  LGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKDYPDFME 917

Query: 181  KEDKPTYISRRVIGKLYR 234
            K DKPTY S +VIGKL+R
Sbjct: 918  KPDKPTYHSEKVIGKLFR 935


>XP_010275353.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
            XP_010275424.1 PREDICTED: probable RNA-dependent RNA
            polymerase 1 [Nelumbo nucifera] XP_010275500.1 PREDICTED:
            probable RNA-dependent RNA polymerase 1 [Nelumbo
            nucifera] XP_010275583.1 PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
            XP_010275643.1 PREDICTED: probable RNA-dependent RNA
            polymerase 1 [Nelumbo nucifera] XP_010275710.1 PREDICTED:
            probable RNA-dependent RNA polymerase 1 [Nelumbo
            nucifera]
          Length = 1136

 Score =  114 bits (286), Expect = 6e-28
 Identities = 54/79 (68%), Positives = 65/79 (82%)
 Frame = +1

Query: 1    LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
            LGII+  HT FAD + + A SD CL+LA+LF++AVDFPKTGVPA+IP  L  +EYPDFME
Sbjct: 872  LGIIANAHTAFADKEPKKAESDACLQLAKLFSIAVDFPKTGVPAEIPQHLYVKEYPDFME 931

Query: 181  KEDKPTYISRRVIGKLYRA 237
            K DKPTY+S RVIGKL+RA
Sbjct: 932  KLDKPTYVSERVIGKLFRA 950


>XP_016510714.1 PREDICTED: RNA-dependent RNA polymerase 1-like [Nicotiana tabacum]
          Length = 658

 Score =  114 bits (285), Expect = 7e-28
 Identities = 54/78 (69%), Positives = 65/78 (83%)
 Frame = +1

Query: 1   LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
           LGII+  H VFAD + +MA SD C +LAQLF++AVDFPKTGVPA+IPS L P+EYPDFME
Sbjct: 400 LGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFME 459

Query: 181 KEDKPTYISRRVIGKLYR 234
           K DKPTY S +VIGKL++
Sbjct: 460 KPDKPTYPSEKVIGKLFQ 477


>XP_015076567.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Solanum
            pennellii]
          Length = 1114

 Score =  114 bits (285), Expect = 8e-28
 Identities = 54/78 (69%), Positives = 65/78 (83%)
 Frame = +1

Query: 1    LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
            LGII+  H VFAD + +MA SD C KLA+LF++AVDFPKTGVPA+IPS L P+EYPDFM+
Sbjct: 856  LGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMD 915

Query: 181  KEDKPTYISRRVIGKLYR 234
            K DK +YIS RVIGKL+R
Sbjct: 916  KPDKTSYISERVIGKLFR 933


>NP_001234319.1 RNA-directed RNA polymerase [Solanum lycopersicum] CAA71421.1
            RNA-directed RNA polymerase [Solanum lycopersicum]
          Length = 1114

 Score =  114 bits (285), Expect = 8e-28
 Identities = 54/78 (69%), Positives = 65/78 (83%)
 Frame = +1

Query: 1    LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
            LGII+  H VFAD + +MA SD C KLA+LF++AVDFPKTGVPA+IPS L P+EYPDFM+
Sbjct: 856  LGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMD 915

Query: 181  KEDKPTYISRRVIGKLYR 234
            K DK +YIS RVIGKL+R
Sbjct: 916  KPDKTSYISERVIGKLFR 933


>XP_016466121.1 PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X2
            [Nicotiana tabacum]
          Length = 1116

 Score =  114 bits (285), Expect = 8e-28
 Identities = 54/78 (69%), Positives = 65/78 (83%)
 Frame = +1

Query: 1    LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
            LGII+  H VFAD + +MA SD C +LAQLF++AVDFPKTGVPA+IPS L P+EYPDFME
Sbjct: 858  LGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFME 917

Query: 181  KEDKPTYISRRVIGKLYR 234
            K DKPTY S +VIGKL++
Sbjct: 918  KPDKPTYHSEKVIGKLFQ 935


>XP_016466120.1 PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
            [Nicotiana tabacum]
          Length = 1116

 Score =  114 bits (285), Expect = 8e-28
 Identities = 54/78 (69%), Positives = 65/78 (83%)
 Frame = +1

Query: 1    LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
            LGII+  H VFAD + +MA SD C +LAQLF++AVDFPKTGVPA+IPS L P+EYPDFME
Sbjct: 858  LGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFME 917

Query: 181  KEDKPTYISRRVIGKLYR 234
            K DKPTY S +VIGKL++
Sbjct: 918  KPDKPTYHSEKVIGKLFQ 935


>XP_009781107.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
            sylvestris] XP_009781108.1 PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Nicotiana sylvestris]
            XP_009781109.1 PREDICTED: probable RNA-dependent RNA
            polymerase 1 [Nicotiana sylvestris]
          Length = 1116

 Score =  114 bits (285), Expect = 8e-28
 Identities = 54/78 (69%), Positives = 65/78 (83%)
 Frame = +1

Query: 1    LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
            LGII+  H VFAD + +MA SD C +LAQLF++AVDFPKTGVPA+IPS L P+EYPDFME
Sbjct: 858  LGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFME 917

Query: 181  KEDKPTYISRRVIGKLYR 234
            K DKPTY S +VIGKL++
Sbjct: 918  KPDKPTYHSEKVIGKLFQ 935


>XP_009623376.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
            tomentosiformis] XP_009623378.1 PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Nicotiana
            tomentosiformis] XP_018632650.1 PREDICTED: probable
            RNA-dependent RNA polymerase 1 [Nicotiana
            tomentosiformis]
          Length = 1116

 Score =  114 bits (285), Expect = 8e-28
 Identities = 54/78 (69%), Positives = 65/78 (83%)
 Frame = +1

Query: 1    LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
            LGII+  H VFAD + +MA SD C +LAQLF++AVDFPKTGVPA+IPS L P+EYPDFME
Sbjct: 858  LGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFME 917

Query: 181  KEDKPTYISRRVIGKLYR 234
            K DKPTY S +VIGKL++
Sbjct: 918  KPDKPTYPSEKVIGKLFQ 935


>CAA09697.1 RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  114 bits (285), Expect = 8e-28
 Identities = 54/78 (69%), Positives = 65/78 (83%)
 Frame = +1

Query: 1    LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
            LGII+  H VFAD + +MA SD C +LAQLF++AVDFPKTGVPA+IPS L P+EYPDFME
Sbjct: 858  LGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFME 917

Query: 181  KEDKPTYISRRVIGKLYR 234
            K DKPTY S +VIGKL++
Sbjct: 918  KPDKPTYPSEKVIGKLFQ 935


>ABV24845.1 RNA-dependent RNA polymerase [Nicotiana glutinosa] ACI46982.1
            RNA-dependent RNA polymerase [Nicotiana glutinosa]
          Length = 1117

 Score =  114 bits (285), Expect = 8e-28
 Identities = 54/78 (69%), Positives = 65/78 (83%)
 Frame = +1

Query: 1    LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
            LGII+  H VFAD + +MA SD C +LAQLF++AVDFPKTGVPA+IPS L P+EYPDFME
Sbjct: 859  LGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFME 918

Query: 181  KEDKPTYISRRVIGKLYR 234
            K DKPTY S +VIGKL++
Sbjct: 919  KPDKPTYHSEKVIGKLFQ 936


>XP_015872918.1 PREDICTED: RNA-dependent RNA polymerase 1-like, partial [Ziziphus
           jujuba]
          Length = 184

 Score =  107 bits (267), Expect = 1e-27
 Identities = 51/78 (65%), Positives = 63/78 (80%)
 Frame = +1

Query: 1   LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
           LGII+  HTVFAD + + A+S  C++LA+LF++AVDFPKTG+PA IP  L  +EYPDFME
Sbjct: 17  LGIIANAHTVFADKEYQKAKSSPCIELARLFSIAVDFPKTGIPAIIPHHLHVKEYPDFME 76

Query: 181 KEDKPTYISRRVIGKLYR 234
           K DKPTY S+ VIGKLYR
Sbjct: 77  KLDKPTYESQNVIGKLYR 94


>KDO60789.1 hypothetical protein CISIN_1g0025861mg, partial [Citrus sinensis]
          Length = 324

 Score =  110 bits (275), Expect = 1e-27
 Identities = 53/79 (67%), Positives = 64/79 (81%)
 Frame = +1

Query: 1   LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
           LGII+  HTVFAD +   ARS+ CL+LA+ F++AVDFPKTGVPA+IP  L  +EYPDFME
Sbjct: 65  LGIIANAHTVFADREPRKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFME 124

Query: 181 KEDKPTYISRRVIGKLYRA 237
           K DKPTY S+ VIGKL+RA
Sbjct: 125 KPDKPTYESQNVIGKLFRA 143


>CAA09896.1 RNA-directed RNA polymerase, partial [Petunia x hybrida]
          Length = 775

 Score =  113 bits (282), Expect = 2e-27
 Identities = 53/78 (67%), Positives = 64/78 (82%)
 Frame = +1

Query: 1   LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
           LG+I+  H VFAD +  MA SD C++LAQLF++AVDFPKTGVPA+IPS L P+EYPDFME
Sbjct: 549 LGVIANAHVVFADREPNMAMSDPCIELAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFME 608

Query: 181 KEDKPTYISRRVIGKLYR 234
           K DK TY S +VIGKL+R
Sbjct: 609 KPDKTTYHSEKVIGKLFR 626


>XP_011075687.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Sesamum indicum]
            XP_011075688.1 PREDICTED: probable RNA-dependent RNA
            polymerase 1 [Sesamum indicum] XP_011075689.1 PREDICTED:
            probable RNA-dependent RNA polymerase 1 [Sesamum indicum]
          Length = 1115

 Score =  113 bits (282), Expect = 2e-27
 Identities = 54/78 (69%), Positives = 66/78 (84%)
 Frame = +1

Query: 1    LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
            LGIIS  HTVFAD ++ MA S++CL+LA+LF++AVDFPKTGVPA+IPS L  +EYPDFM+
Sbjct: 859  LGIISNAHTVFADKEESMALSESCLELARLFSIAVDFPKTGVPAEIPSHLRVKEYPDFMD 918

Query: 181  KEDKPTYISRRVIGKLYR 234
            K DK  Y S+RVIGKLYR
Sbjct: 919  KPDKTAYESKRVIGKLYR 936


>XP_015160223.1 PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X2
            [Solanum tuberosum]
          Length = 1115

 Score =  112 bits (281), Expect = 3e-27
 Identities = 56/79 (70%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1    LGIISARHTVFADSDQEMARSDNCLKLAQLFTLAVDFPKTGVPAKIPSDLVPREYPDFME 180
            LGII+  H VFAD + +MA SD C KLA+LF++AVDFPKTGVPA+IPS L P+EYPDFM+
Sbjct: 856  LGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMD 915

Query: 181  K-EDKPTYISRRVIGKLYR 234
            K  DK TYIS RVIGKLYR
Sbjct: 916  KPPDKTTYISERVIGKLYR 934