BLASTX nr result
ID: Ephedra29_contig00019917
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00019917
(402 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAQ88406.1 RNA helicase nonsense mRNA reducing factor [Klebsormi... 104 2e-23
XP_005829144.1 hypothetical protein GUITHDRAFT_74201 [Guillardia... 90 1e-19
XP_004992918.1 Upf1 protein [Salpingoeca rosetta] EGD74661.1 Upf... 92 6e-19
EDL82152.1 rCG28625 [Rattus norvegicus] 85 2e-18
XP_004340705.1 hypothetical protein ACA1_393280 [Acanthamoeba ca... 89 5e-18
XP_005357480.1 PREDICTED: protein ZGRF1 [Microtus ochrogaster] 88 1e-17
XP_014353426.1 PREDICTED: protein ZGRF1 [Latimeria chalumnae] 86 2e-17
XP_019389633.1 PREDICTED: protein ZGRF1 isoform X2 [Crocodylus p... 87 2e-17
XP_019377530.1 PREDICTED: protein ZGRF1 isoform X2 [Gavialis gan... 87 2e-17
XP_019389630.1 PREDICTED: protein ZGRF1 isoform X1 [Crocodylus p... 87 2e-17
XP_019377528.1 PREDICTED: protein ZGRF1 isoform X1 [Gavialis gan... 87 2e-17
EGW10685.1 Uncharacterized protein FLJ44066 [Cricetulus griseus] 86 2e-17
XP_014376263.1 PREDICTED: protein ZGRF1 [Alligator sinensis] 87 3e-17
EDL12262.1 mCG20248 [Mus musculus] 84 3e-17
AAH30185.1 4930422G04Rik protein [Mus musculus] 84 3e-17
XP_014448638.1 PREDICTED: protein ZGRF1 isoform X5 [Tupaia chine... 87 4e-17
XP_006162314.1 PREDICTED: protein ZGRF1 isoform X4 [Tupaia chine... 87 4e-17
XP_006162313.1 PREDICTED: protein ZGRF1 isoform X3 [Tupaia chine... 87 4e-17
XP_014448637.1 PREDICTED: protein ZGRF1 isoform X2 [Tupaia chine... 87 4e-17
XP_014448639.1 PREDICTED: protein ZGRF1 isoform X6 [Tupaia chine... 87 4e-17
>GAQ88406.1 RNA helicase nonsense mRNA reducing factor [Klebsormidium flaccidum]
Length = 1432
Score = 104 bits (260), Expect = 2e-23
Identities = 51/76 (67%), Positives = 62/76 (81%)
Frame = -1
Query: 261 VQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKASNLKTNY 82
VQ+STVDAFQGMEK IIILSCCRT G+GFL+SP+RLNVA++RARNHLLI+G A NL+T
Sbjct: 973 VQVSTVDAFQGMEKDIIILSCCRTNGIGFLASPHRLNVAMSRARNHLLIIGCAPNLQTCP 1032
Query: 81 YWSKLLDDVASTSGSY 34
W +LL + T +Y
Sbjct: 1033 MWKELLTCIRRTPLAY 1048
>XP_005829144.1 hypothetical protein GUITHDRAFT_74201 [Guillardia theta CCMP2712]
EKX42164.1 hypothetical protein GUITHDRAFT_74201
[Guillardia theta CCMP2712]
Length = 228
Score = 90.1 bits (222), Expect = 1e-19
Identities = 40/80 (50%), Positives = 57/80 (71%)
Frame = -1
Query: 273 SVSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKASNL 94
S +Q+STVDAFQG E+ I+++S CRT +GF++SPNR+NVA+TR+R HL+IVG L
Sbjct: 122 SAHSIQVSTVDAFQGGEREIVLVSSCRTQSLGFIASPNRMNVAITRSRRHLVIVGCKRTL 181
Query: 93 KTNYYWSKLLDDVASTSGSY 34
N +W +L+ +S G Y
Sbjct: 182 PQNEHWRLILERASSLPGGY 201
>XP_004992918.1 Upf1 protein [Salpingoeca rosetta] EGD74661.1 Upf1 protein
[Salpingoeca rosetta]
Length = 1821
Score = 91.7 bits (226), Expect = 6e-19
Identities = 40/82 (48%), Positives = 58/82 (70%)
Frame = -1
Query: 276 HSVSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKASN 97
H + VQ+STVDAFQG EK +I+LSC RT G+GF+ +P+R+NVA+TRAR HL I+GK +
Sbjct: 1541 HDYAAVQVSTVDAFQGGEKEVIVLSCVRTQGVGFIDAPDRVNVAITRARRHLFIIGKYTT 1600
Query: 96 LKTNYYWSKLLDDVASTSGSYI 31
L +N W +++ G ++
Sbjct: 1601 LASNKLWRRVVSFCRDLKGGFM 1622
>EDL82152.1 rCG28625 [Rattus norvegicus]
Length = 146
Score = 84.7 bits (208), Expect = 2e-18
Identities = 40/69 (57%), Positives = 50/69 (72%)
Frame = -1
Query: 270 VSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKASNLK 91
V V++STVDAFQG EK IIILSC RT +GF+ S R+NVALTR R HLLI+G S L+
Sbjct: 29 VKAVEVSTVDAFQGAEKEIIILSCVRTRQVGFIDSEKRMNVALTRGRRHLLIIGSLSCLR 88
Query: 90 TNYYWSKLL 64
N W +++
Sbjct: 89 KNQLWGRVI 97
>XP_004340705.1 hypothetical protein ACA1_393280 [Acanthamoeba castellanii str.
Neff] ELR18662.1 hypothetical protein ACA1_393280
[Acanthamoeba castellanii str. Neff]
Length = 723
Score = 89.0 bits (219), Expect = 5e-18
Identities = 43/92 (46%), Positives = 59/92 (64%)
Frame = -1
Query: 330 EDQRKVKMVSSNFLAENRHSVSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLN 151
E +R+V+ N+ E+Q+STVDAFQG EK +II++C RTT +GF+ SP RLN
Sbjct: 416 ERRRQVRGKQWQEKQRNKLVAKEIQVSTVDAFQGSEKEVIIVTCVRTTRLGFIDSPKRLN 475
Query: 150 VALTRARNHLLIVGKASNLKTNYYWSKLLDDV 55
V LTRA+ HL+IVG L N W+ +L +
Sbjct: 476 VTLTRAKRHLIIVGNGKVLAGNQTWTTILSQI 507
>XP_005357480.1 PREDICTED: protein ZGRF1 [Microtus ochrogaster]
Length = 2018
Score = 87.8 bits (216), Expect = 1e-17
Identities = 42/70 (60%), Positives = 52/70 (74%)
Frame = -1
Query: 273 SVSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKASNL 94
+V VQ+STVDAFQG EK IIILSC RT +GF+ S R+NVALTR R HLLIVG S L
Sbjct: 1900 NVKAVQVSTVDAFQGAEKEIIILSCVRTRQVGFIDSEKRMNVALTRGRRHLLIVGSLSCL 1959
Query: 93 KTNYYWSKLL 64
+ N+ W +++
Sbjct: 1960 RKNHLWGRVI 1969
>XP_014353426.1 PREDICTED: protein ZGRF1 [Latimeria chalumnae]
Length = 280
Score = 85.5 bits (210), Expect = 2e-17
Identities = 41/69 (59%), Positives = 50/69 (72%)
Frame = -1
Query: 270 VSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKASNLK 91
V VQ+STVDAFQG EK II+LSC RT +GF+ S R+NVALTR R HLLIVG + L+
Sbjct: 138 VKAVQVSTVDAFQGAEKEIIVLSCVRTRQVGFIDSEKRMNVALTRGRRHLLIVGNLACLR 197
Query: 90 TNYYWSKLL 64
N W K++
Sbjct: 198 KNKLWGKVI 206
>XP_019389633.1 PREDICTED: protein ZGRF1 isoform X2 [Crocodylus porosus]
Length = 2105
Score = 87.4 bits (215), Expect = 2e-17
Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Frame = -1
Query: 276 HSVSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKASN 97
H + VQ+STVDAFQG EK II+LSC RT +GF+ S R+NVALTRA+ HLLI+G
Sbjct: 1982 HEIKAVQVSTVDAFQGAEKEIIVLSCVRTRQVGFIDSEKRMNVALTRAKRHLLIIGNLGC 2041
Query: 96 LKTNYYWSKLLDDVASTSG--SYISCPQTVLDNV 1
L N W +++ T ++S + L+N+
Sbjct: 2042 LSKNKLWGRVIHHCEGTENGLQHVSQYERQLNNI 2075
>XP_019377530.1 PREDICTED: protein ZGRF1 isoform X2 [Gavialis gangeticus]
Length = 2106
Score = 87.4 bits (215), Expect = 2e-17
Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Frame = -1
Query: 276 HSVSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKASN 97
H + VQ+STVDAFQG EK II+LSC RT +GF+ S R+NVALTRA+ HLLI+G
Sbjct: 1982 HEIKAVQVSTVDAFQGAEKEIIVLSCVRTRQVGFIDSEKRMNVALTRAKRHLLIIGNLGC 2041
Query: 96 LKTNYYWSKLLDDVASTSG--SYISCPQTVLDNV 1
L N W +++ T ++S + L+N+
Sbjct: 2042 LSKNKLWGRVIHHCEGTENGLQHVSQYERQLNNI 2075
>XP_019389630.1 PREDICTED: protein ZGRF1 isoform X1 [Crocodylus porosus]
XP_019389631.1 PREDICTED: protein ZGRF1 isoform X1
[Crocodylus porosus] XP_019389632.1 PREDICTED: protein
ZGRF1 isoform X1 [Crocodylus porosus]
Length = 2150
Score = 87.4 bits (215), Expect = 2e-17
Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Frame = -1
Query: 276 HSVSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKASN 97
H + VQ+STVDAFQG EK II+LSC RT +GF+ S R+NVALTRA+ HLLI+G
Sbjct: 2027 HEIKAVQVSTVDAFQGAEKEIIVLSCVRTRQVGFIDSEKRMNVALTRAKRHLLIIGNLGC 2086
Query: 96 LKTNYYWSKLLDDVASTSG--SYISCPQTVLDNV 1
L N W +++ T ++S + L+N+
Sbjct: 2087 LSKNKLWGRVIHHCEGTENGLQHVSQYERQLNNI 2120
>XP_019377528.1 PREDICTED: protein ZGRF1 isoform X1 [Gavialis gangeticus]
XP_019377529.1 PREDICTED: protein ZGRF1 isoform X1
[Gavialis gangeticus]
Length = 2151
Score = 87.4 bits (215), Expect = 2e-17
Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Frame = -1
Query: 276 HSVSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKASN 97
H + VQ+STVDAFQG EK II+LSC RT +GF+ S R+NVALTRA+ HLLI+G
Sbjct: 2027 HEIKAVQVSTVDAFQGAEKEIIVLSCVRTRQVGFIDSEKRMNVALTRAKRHLLIIGNLGC 2086
Query: 96 LKTNYYWSKLLDDVASTSG--SYISCPQTVLDNV 1
L N W +++ T ++S + L+N+
Sbjct: 2087 LSKNKLWGRVIHHCEGTENGLQHVSQYERQLNNI 2120
>EGW10685.1 Uncharacterized protein FLJ44066 [Cricetulus griseus]
Length = 351
Score = 86.3 bits (212), Expect = 2e-17
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = -1
Query: 282 NRHSVSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKA 103
N VQ+STVDAFQG EK IIILSC RT +GF+ S R+NVALTR+R HLLIVG
Sbjct: 230 NHPEAKAVQVSTVDAFQGAEKEIIILSCVRTRQVGFIDSEKRMNVALTRSRRHLLIVGSL 289
Query: 102 SNLKTNYYWSKLL 64
S L+ N W +++
Sbjct: 290 SCLRKNRLWERVI 302
>XP_014376263.1 PREDICTED: protein ZGRF1 [Alligator sinensis]
Length = 2120
Score = 87.0 bits (214), Expect = 3e-17
Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Frame = -1
Query: 276 HSVSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKASN 97
H + VQ+STVDAFQG EK II+LSC RT +GF+ S R+NVALTRA+ HLLI+G
Sbjct: 2005 HEIRAVQVSTVDAFQGAEKEIIVLSCVRTRQVGFIDSEKRMNVALTRAKRHLLIIGNLGC 2064
Query: 96 LKTNYYWSKLLDDVASTSG--SYISCPQTVLDNV 1
L N W +++ T ++S + L+N+
Sbjct: 2065 LSKNKLWGRVIHHCEGTENGLQHVSQYERQLNNI 2098
>EDL12262.1 mCG20248 [Mus musculus]
Length = 237
Score = 84.0 bits (206), Expect = 3e-17
Identities = 41/69 (59%), Positives = 49/69 (71%)
Frame = -1
Query: 270 VSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKASNLK 91
V VQ+STVDAFQG EK I ILSC RT +GF+ S R+NVALTR R HLLIVG S L+
Sbjct: 120 VKAVQVSTVDAFQGAEKEITILSCVRTRQVGFIDSEKRMNVALTRGRRHLLIVGSLSCLR 179
Query: 90 TNYYWSKLL 64
N W +++
Sbjct: 180 KNRLWGRVI 188
>AAH30185.1 4930422G04Rik protein [Mus musculus]
Length = 237
Score = 84.0 bits (206), Expect = 3e-17
Identities = 41/69 (59%), Positives = 49/69 (71%)
Frame = -1
Query: 270 VSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKASNLK 91
V VQ+STVDAFQG EK I ILSC RT +GF+ S R+NVALTR R HLLIVG S L+
Sbjct: 120 VKAVQVSTVDAFQGAEKEITILSCVRTRQVGFIDSEKRMNVALTRGRRHLLIVGSLSCLR 179
Query: 90 TNYYWSKLL 64
N W +++
Sbjct: 180 KNRLWGRVI 188
>XP_014448638.1 PREDICTED: protein ZGRF1 isoform X5 [Tupaia chinensis]
Length = 1705
Score = 86.7 bits (213), Expect = 4e-17
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = -1
Query: 279 RHSVSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKAS 100
R SV+ VQ+STVDAFQG EK ++ILSC RT +GF+ S R+NVALTRAR HLLIVG +
Sbjct: 1561 RPSVTAVQVSTVDAFQGAEKDVVILSCVRTRQVGFIDSEKRVNVALTRARRHLLIVGSVA 1620
Query: 99 NLKTNYYWSKLL 64
L+ + W +++
Sbjct: 1621 CLRRSRLWGRVI 1632
>XP_006162314.1 PREDICTED: protein ZGRF1 isoform X4 [Tupaia chinensis]
Length = 1787
Score = 86.7 bits (213), Expect = 4e-17
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = -1
Query: 279 RHSVSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKAS 100
R SV+ VQ+STVDAFQG EK ++ILSC RT +GF+ S R+NVALTRAR HLLIVG +
Sbjct: 1643 RPSVTAVQVSTVDAFQGAEKDVVILSCVRTRQVGFIDSEKRVNVALTRARRHLLIVGSVA 1702
Query: 99 NLKTNYYWSKLL 64
L+ + W +++
Sbjct: 1703 CLRRSRLWGRVI 1714
>XP_006162313.1 PREDICTED: protein ZGRF1 isoform X3 [Tupaia chinensis]
Length = 1823
Score = 86.7 bits (213), Expect = 4e-17
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = -1
Query: 279 RHSVSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKAS 100
R SV+ VQ+STVDAFQG EK ++ILSC RT +GF+ S R+NVALTRAR HLLIVG +
Sbjct: 1679 RPSVTAVQVSTVDAFQGAEKDVVILSCVRTRQVGFIDSEKRVNVALTRARRHLLIVGSVA 1738
Query: 99 NLKTNYYWSKLL 64
L+ + W +++
Sbjct: 1739 CLRRSRLWGRVI 1750
>XP_014448637.1 PREDICTED: protein ZGRF1 isoform X2 [Tupaia chinensis]
Length = 1829
Score = 86.7 bits (213), Expect = 4e-17
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = -1
Query: 279 RHSVSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKAS 100
R SV+ VQ+STVDAFQG EK ++ILSC RT +GF+ S R+NVALTRAR HLLIVG +
Sbjct: 1685 RPSVTAVQVSTVDAFQGAEKDVVILSCVRTRQVGFIDSEKRVNVALTRARRHLLIVGSVA 1744
Query: 99 NLKTNYYWSKLL 64
L+ + W +++
Sbjct: 1745 CLRRSRLWGRVI 1756
>XP_014448639.1 PREDICTED: protein ZGRF1 isoform X6 [Tupaia chinensis]
Length = 1997
Score = 86.7 bits (213), Expect = 4e-17
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = -1
Query: 279 RHSVSEVQISTVDAFQGMEKSIIILSCCRTTGMGFLSSPNRLNVALTRARNHLLIVGKAS 100
R SV+ VQ+STVDAFQG EK ++ILSC RT +GF+ S R+NVALTRAR HLLIVG +
Sbjct: 1853 RPSVTAVQVSTVDAFQGAEKDVVILSCVRTRQVGFIDSEKRVNVALTRARRHLLIVGSVA 1912
Query: 99 NLKTNYYWSKLL 64
L+ + W +++
Sbjct: 1913 CLRRSRLWGRVI 1924