BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00019835
         (550 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KDO59820.1 hypothetical protein CISIN_1g023907mg [Citrus sinensis]     83   3e-16
KDO59819.1 hypothetical protein CISIN_1g023907mg [Citrus sinensis]     83   5e-16
XP_006487001.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...    83   5e-16
XP_006486999.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...    83   1e-15
XP_006422925.1 hypothetical protein CICLE_v10028283mg [Citrus cl...    82   4e-15
XP_010647894.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...    78   1e-13
XP_002282614.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...    78   1e-13
KNA07729.1 hypothetical protein SOVF_168390 [Spinacia oleracea]        78   2e-13
XP_010691670.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...    77   3e-13
XP_020102941.1 uncharacterized protein LOC109720317 isoform X8 [...    77   4e-13
XP_020102940.1 uncharacterized protein LOC109720317 isoform X7 [...    77   4e-13
XP_020102939.1 RNA pseudouridine synthase 4, mitochondrial-like ...    77   4e-13
XP_020102938.1 RNA pseudouridine synthase 4, mitochondrial-like ...    77   4e-13
XP_020102936.1 RNA pseudouridine synthase 4, mitochondrial-like ...    77   4e-13
XP_020102935.1 RNA pseudouridine synthase 4, mitochondrial-like ...    77   4e-13
XP_020102934.1 RNA pseudouridine synthase 4, mitochondrial-like ...    77   4e-13
XP_020102933.1 RNA pseudouridine synthase 4, mitochondrial-like ...    77   4e-13
OAY82177.1 RNA pseudouridine synthase 4, mitochondrial [Ananas c...    73   6e-13
XP_007157229.1 hypothetical protein PHAVU_002G053600g [Phaseolus...    74   2e-12
XP_019054042.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...    73   5e-12

>KDO59820.1 hypothetical protein CISIN_1g023907mg [Citrus sinensis]
          Length = 236

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 11/115 (9%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFDPISKHIESESNAE-----------ELNNGSVLSEEPLLHLHCRQ 149
           DYKYGW  H+KW+ F P    +  +SN E           +L +GS+L ++P LHLHC++
Sbjct: 133 DYKYGWQTHRKWKQFHP--SDLSKDSNEEIPKEKTLHFGLDLESGSILEKQPRLHLHCKE 190

Query: 150 ISIPNITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           +++PN+++A+++  +                      + VAPLPSHM RSWD ++
Sbjct: 191 MTLPNVSQAIQKVQLSSGCDVSKLETL----------KLVAPLPSHMQRSWDVLN 235


>KDO59819.1 hypothetical protein CISIN_1g023907mg [Citrus sinensis]
          Length = 275

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 11/115 (9%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFDPISKHIESESNAE-----------ELNNGSVLSEEPLLHLHCRQ 149
           DYKYGW  H+KW+ F P    +  +SN E           +L +GS+L ++P LHLHC++
Sbjct: 172 DYKYGWQTHRKWKQFHP--SDLSKDSNEEIPKEKTLHFGLDLESGSILEKQPRLHLHCKE 229

Query: 150 ISIPNITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           +++PN+++A+++  +                      + VAPLPSHM RSWD ++
Sbjct: 230 MTLPNVSQAIQKVQLSSGCDVSKLETL----------KLVAPLPSHMQRSWDVLN 274


>XP_006487001.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
           [Citrus sinensis]
          Length = 275

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 11/115 (9%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFDPISKHIESESNAE-----------ELNNGSVLSEEPLLHLHCRQ 149
           DYKYGW  H+KW+ F P    +  +SN E           +L +GS+L ++P LHLHC++
Sbjct: 172 DYKYGWQTHRKWKQFHP--SDLSKDSNEEIPKEKTLHFGLDLESGSILEKQPRLHLHCKE 229

Query: 150 ISIPNITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           +++PN+++A+++  +                      + VAPLPSHM RSWD ++
Sbjct: 230 MTLPNVSQAIQKVQLSSGCDVSKLETL----------KLVAPLPSHMQRSWDVLN 274


>XP_006486999.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Citrus sinensis] XP_006487000.1 PREDICTED: RNA
           pseudouridine synthase 4, mitochondrial isoform X1
           [Citrus sinensis]
          Length = 362

 Score = 83.2 bits (204), Expect = 1e-15
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 11/115 (9%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFDPISKHIESESNAE-----------ELNNGSVLSEEPLLHLHCRQ 149
           DYKYGW  H+KW+ F P    +  +SN E           +L +GS+L ++P LHLHC++
Sbjct: 259 DYKYGWQTHRKWKQFHP--SDLSKDSNEEIPKEKTLHFGLDLESGSILEKQPRLHLHCKE 316

Query: 150 ISIPNITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           +++PN+++A+++  +                      + VAPLPSHM RSWD ++
Sbjct: 317 MTLPNVSQAIQKVQLSSGCDVSKLETL----------KLVAPLPSHMQRSWDVLN 361


>XP_006422925.1 hypothetical protein CICLE_v10028283mg [Citrus clementina]
           ESR36165.1 hypothetical protein CICLE_v10028283mg
           [Citrus clementina]
          Length = 494

 Score = 82.4 bits (202), Expect = 4e-15
 Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 9/113 (7%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFDP--ISKHIESESNAE-------ELNNGSVLSEEPLLHLHCRQIS 155
           DYKYGW  H+KW+ F P  ++K    E+  E       +L +GS+L ++P LHLHC++++
Sbjct: 391 DYKYGWQTHRKWKQFHPSDLNKDSNDETPKEKTLHFGLDLESGSILEKQPGLHLHCKEMT 450

Query: 156 IPNITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           +PN+++A+++  +                      + VAPLPSHM RSWD ++
Sbjct: 451 LPNVSQAIQKVQLSSGCDVSKLESL----------KLVAPLPSHMQRSWDVLN 493


>XP_010647894.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
           [Vitis vinifera]
          Length = 430

 Score = 78.2 bits (191), Expect = 1e-13
 Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPF--DPISKHI-ESESNAE------ELNNGSVLSEEPLLHLHCRQIS 155
           DYKYGW AH+KW+      I K++ E+ SN +      +L +GS+L ++P LHLHC+Q+ 
Sbjct: 327 DYKYGWQAHRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGSILDKQPHLHLHCKQMV 386

Query: 156 IPNITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           +PN++ A++   +                       FVAPLPSHM RSWD ++
Sbjct: 387 LPNVSLALQNLQLSAECDLSELESL----------EFVAPLPSHMQRSWDILN 429


>XP_002282614.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Vitis vinifera] CBI40257.3 unnamed protein product,
           partial [Vitis vinifera]
          Length = 476

 Score = 78.2 bits (191), Expect = 1e-13
 Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPF--DPISKHI-ESESNAE------ELNNGSVLSEEPLLHLHCRQIS 155
           DYKYGW AH+KW+      I K++ E+ SN +      +L +GS+L ++P LHLHC+Q+ 
Sbjct: 373 DYKYGWQAHRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGSILDKQPHLHLHCKQMV 432

Query: 156 IPNITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           +PN++ A++   +                       FVAPLPSHM RSWD ++
Sbjct: 433 LPNVSLALQNLQLSAECDLSELESL----------EFVAPLPSHMQRSWDILN 475


>KNA07729.1 hypothetical protein SOVF_168390 [Spinacia oleracea]
          Length = 478

 Score = 77.8 bits (190), Expect = 2e-13
 Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFD--PISKHIESESNAEELNN--GSVLSEEPLLHLHCRQISIPNIT 170
           DYKYGW AH++W P    P  K +E++++   LN   GS+  ++P LHLHC+Q+++PNI+
Sbjct: 374 DYKYGWQAHRRWEPLPSIPDEKFVEAKADPLGLNLECGSISEKQPHLHLHCKQMNLPNIS 433

Query: 171 EAMER--PDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMSILA 323
            A++   PD+                        VAPLP HM RSW+ +  LA
Sbjct: 434 VALKHVSPDMEYDFSKLETI------------NLVAPLPLHMQRSWNLLKFLA 474


>XP_010691670.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Beta
           vulgaris subsp. vulgaris] KMT01127.1 hypothetical
           protein BVRB_9g223790 [Beta vulgaris subsp. vulgaris]
          Length = 478

 Score = 77.0 bits (188), Expect = 3e-13
 Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFDPISKHIESESNAEEL----NNGSVLSEEPLLHLHCRQISIPNIT 170
           DYKYGW AH++W P  P       E+    L      GS+  ++P LHLHC+Q+ +PNI+
Sbjct: 374 DYKYGWQAHRRWEPLQPSPNEQSGETKLHPLGIGPECGSISEKQPHLHLHCKQMVLPNIS 433

Query: 171 EAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMSILA 323
             +E+  +                        VAPLPSHM RSW+ ++ LA
Sbjct: 434 TILEQISLDSEYDFSKLESL----------NLVAPLPSHMQRSWNLLNSLA 474


>XP_020102941.1 uncharacterized protein LOC109720317 isoform X8 [Ananas comosus]
          Length = 437

 Score = 76.6 bits (187), Expect = 4e-13
 Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFDPISKHIESESNAE-------ELNNGSVLSEEPLLHLHCRQISIP 161
           DYKYGW +H++W+P  P    I+ E           +   GS+  ++P LHLHC+Q+++P
Sbjct: 335 DYKYGWKSHRRWKPV-PFPPTIDVEKFPRNKLPFGLKSGGGSIAEKQPWLHLHCKQMTLP 393

Query: 162 NITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           NI+ A+E P                         FVAPLP+HM +SWD +S
Sbjct: 394 NISAALEHPQ--------SLNDDDRHLSKLEKLSFVAPLPTHMQQSWDILS 436


>XP_020102940.1 uncharacterized protein LOC109720317 isoform X7 [Ananas comosus]
          Length = 453

 Score = 76.6 bits (187), Expect = 4e-13
 Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFDPISKHIESESNAE-------ELNNGSVLSEEPLLHLHCRQISIP 161
           DYKYGW +H++W+P  P    I+ E           +   GS+  ++P LHLHC+Q+++P
Sbjct: 351 DYKYGWKSHRRWKPV-PFPPTIDVEKFPRNKLPFGLKSGGGSIAEKQPWLHLHCKQMTLP 409

Query: 162 NITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           NI+ A+E P                         FVAPLP+HM +SWD +S
Sbjct: 410 NISAALEHPQ--------SLNDDDRHLSKLEKLSFVAPLPTHMQQSWDILS 452


>XP_020102939.1 RNA pseudouridine synthase 4, mitochondrial-like isoform X6 [Ananas
           comosus]
          Length = 477

 Score = 76.6 bits (187), Expect = 4e-13
 Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFDPISKHIESESNAE-------ELNNGSVLSEEPLLHLHCRQISIP 161
           DYKYGW +H++W+P  P    I+ E           +   GS+  ++P LHLHC+Q+++P
Sbjct: 375 DYKYGWKSHRRWKPV-PFPPTIDVEKFPRNKLPFGLKSGGGSIAEKQPWLHLHCKQMTLP 433

Query: 162 NITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           NI+ A+E P                         FVAPLP+HM +SWD +S
Sbjct: 434 NISAALEHPQ--------SLNDDDRHLSKLEKLSFVAPLPTHMQQSWDILS 476


>XP_020102938.1 RNA pseudouridine synthase 4, mitochondrial-like isoform X5 [Ananas
           comosus]
          Length = 478

 Score = 76.6 bits (187), Expect = 4e-13
 Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFDPISKHIESESNAE-------ELNNGSVLSEEPLLHLHCRQISIP 161
           DYKYGW +H++W+P  P    I+ E           +   GS+  ++P LHLHC+Q+++P
Sbjct: 376 DYKYGWKSHRRWKPV-PFPPTIDVEKFPRNKLPFGLKSGGGSIAEKQPWLHLHCKQMTLP 434

Query: 162 NITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           NI+ A+E P                         FVAPLP+HM +SWD +S
Sbjct: 435 NISAALEHPQ--------SLNDDDRHLSKLEKLSFVAPLPTHMQQSWDILS 477


>XP_020102936.1 RNA pseudouridine synthase 4, mitochondrial-like isoform X4 [Ananas
           comosus]
          Length = 509

 Score = 76.6 bits (187), Expect = 4e-13
 Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFDPISKHIESESNAE-------ELNNGSVLSEEPLLHLHCRQISIP 161
           DYKYGW +H++W+P  P    I+ E           +   GS+  ++P LHLHC+Q+++P
Sbjct: 407 DYKYGWKSHRRWKPV-PFPPTIDVEKFPRNKLPFGLKSGGGSIAEKQPWLHLHCKQMTLP 465

Query: 162 NITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           NI+ A+E P                         FVAPLP+HM +SWD +S
Sbjct: 466 NISAALEHPQ--------SLNDDDRHLSKLEKLSFVAPLPTHMQQSWDILS 508


>XP_020102935.1 RNA pseudouridine synthase 4, mitochondrial-like isoform X3 [Ananas
           comosus]
          Length = 510

 Score = 76.6 bits (187), Expect = 4e-13
 Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFDPISKHIESESNAE-------ELNNGSVLSEEPLLHLHCRQISIP 161
           DYKYGW +H++W+P  P    I+ E           +   GS+  ++P LHLHC+Q+++P
Sbjct: 408 DYKYGWKSHRRWKPV-PFPPTIDVEKFPRNKLPFGLKSGGGSIAEKQPWLHLHCKQMTLP 466

Query: 162 NITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           NI+ A+E P                         FVAPLP+HM +SWD +S
Sbjct: 467 NISAALEHPQ--------SLNDDDRHLSKLEKLSFVAPLPTHMQQSWDILS 509


>XP_020102934.1 RNA pseudouridine synthase 4, mitochondrial-like isoform X2 [Ananas
           comosus]
          Length = 525

 Score = 76.6 bits (187), Expect = 4e-13
 Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFDPISKHIESESNAE-------ELNNGSVLSEEPLLHLHCRQISIP 161
           DYKYGW +H++W+P  P    I+ E           +   GS+  ++P LHLHC+Q+++P
Sbjct: 423 DYKYGWKSHRRWKPV-PFPPTIDVEKFPRNKLPFGLKSGGGSIAEKQPWLHLHCKQMTLP 481

Query: 162 NITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           NI+ A+E P                         FVAPLP+HM +SWD +S
Sbjct: 482 NISAALEHPQ--------SLNDDDRHLSKLEKLSFVAPLPTHMQQSWDILS 524


>XP_020102933.1 RNA pseudouridine synthase 4, mitochondrial-like isoform X1 [Ananas
           comosus]
          Length = 526

 Score = 76.6 bits (187), Expect = 4e-13
 Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFDPISKHIESESNAE-------ELNNGSVLSEEPLLHLHCRQISIP 161
           DYKYGW +H++W+P  P    I+ E           +   GS+  ++P LHLHC+Q+++P
Sbjct: 424 DYKYGWKSHRRWKPV-PFPPTIDVEKFPRNKLPFGLKSGGGSIAEKQPWLHLHCKQMTLP 482

Query: 162 NITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           NI+ A+E P                         FVAPLP+HM +SWD +S
Sbjct: 483 NISAALEHPQ--------SLNDDDRHLSKLEKLSFVAPLPTHMQQSWDILS 525


>OAY82177.1 RNA pseudouridine synthase 4, mitochondrial [Ananas comosus]
          Length = 183

 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFDPISKHIESESNAE-------ELNNGSVLSEEPLLHLHCRQISIP 161
           DYKYGW +H++W+P  P    I+ E           +   GS+  ++P LHLHC+Q+++P
Sbjct: 81  DYKYGWKSHRRWKPV-PFPPTIDVEKFPRNKLPFGLKSGGGSIAEKQPWLHLHCKQMTLP 139

Query: 162 NITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           NI+ A+E                           FVAPLP+HM +SWD +S
Sbjct: 140 NISAALEH--------LQSLNDDDRHLSKLEKLSFVAPLPTHMQQSWDILS 182


>XP_007157229.1 hypothetical protein PHAVU_002G053600g [Phaseolus vulgaris]
           ESW29223.1 hypothetical protein PHAVU_002G053600g
           [Phaseolus vulgaris]
          Length = 432

 Score = 74.3 bits (181), Expect = 2e-12
 Identities = 41/112 (36%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFDPISKHIESESNAEE--------LNNGSVLSEEPLLHLHCRQISI 158
           DYKYGW AH+KW  FD  +     E + +E        LNNGS+    P LHLHC++I +
Sbjct: 330 DYKYGWQAHRKWGNFDLSNVEDSCEEHLKEETLPFGLNLNNGSISENRPRLHLHCKKIVL 389

Query: 159 PNITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           PNI+EA++                          + VA LP +M RSWD  S
Sbjct: 390 PNISEALQN----------VQSFSNCDLSQVEGLQLVADLPPYMQRSWDITS 431


>XP_019054042.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X2
           [Nelumbo nucifera]
          Length = 367

 Score = 73.2 bits (178), Expect = 5e-12
 Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
 Frame = +3

Query: 3   DYKYGWSAHKKWRPFDPISKHIESESNAE---------ELNNGSVLSEEPLLHLHCRQIS 155
           DYKYGW  HKKW+    +   IE  +            ++  GSVLS+ PLLHLHCR++ 
Sbjct: 260 DYKYGWYVHKKWKQMPRVD--IEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELI 317

Query: 156 IPNITEAMERPDIXXXXXXXXXXXXXXXXXXXXXQRFVAPLPSHMSRSWDYMS 314
           +PNI + ++  D                       RFVAP+PSHM  SW+ MS
Sbjct: 318 LPNIAKFLDILD-------RKSQNLPKFSSRPDVLRFVAPMPSHMKISWNLMS 363