BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00019810
         (674 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AIN46594.1 growth regulating factor 1 [Larix kaempferi]                94   6e-19
AJP06298.1 GRF3 [Pinus tabuliformis]                                   62   9e-08

>AIN46594.1 growth regulating factor 1 [Larix kaempferi]
          Length = 420

 Score = 94.4 bits (233), Expect = 6e-19
 Identities = 69/168 (41%), Positives = 82/168 (48%), Gaps = 25/168 (14%)
 Frame = +3

Query: 3   RYMKGDIDEHVFFRSEDNRVGMG---------ESGGGGAWRS-IPSKSNQQSAKHEH--- 143
           RYMKGDID HVFF SE +    G          S     WRS +PSK +  S++      
Sbjct: 270 RYMKGDIDGHVFFSSEVSGTSRGLGIDSQSMLSSSLDNGWRSFMPSKVSPFSSQSSFPID 329

Query: 144 ----HQYSFLNSSFXXXXXXXXXXXXNXXXXXXXXXAVGVKMEEQPLRHFFDDWPRSTRD 311
                Q+SFL SSF                       V VK+E+QPLRHFFD+WPRS RD
Sbjct: 330 AATKQQHSFLTSSFGCVQDQP----------------VNVKIEQQPLRHFFDEWPRS-RD 372

Query: 312 TPAMTWNDIXXXXXXXXXXTTQLSISIPIT-SDF-------SPPRACK 431
           +  ++W D+          TTQLSISIPIT SDF       SP R CK
Sbjct: 373 SSTLSWADLDEERSNRNSSTTQLSISIPITASDFSGSSNSHSPTRGCK 420


>AJP06298.1 GRF3 [Pinus tabuliformis]
          Length = 597

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 55/164 (33%), Positives = 67/164 (40%), Gaps = 27/164 (16%)
 Frame = +3

Query: 3   RYMKG----DIDEHVFFRSEDNRV-GMGE-----SGGGGAWRSIPSKSNQQSAKHEHHQY 152
           RYM G    DIDE VFF        G+G+     S     WRS       Q    ++  +
Sbjct: 409 RYMNGMKGGDIDEQVFFSDVSGSTRGLGQDSILSSVNNNGWRSSMQSKVSQVKTEQNGSF 468

Query: 153 SFLNS--------------SFXXXXXXXXXXXXNXXXXXXXXXAVGVKMEEQ--PLRHFF 284
              NS              S             N          VG + E Q  PLRHFF
Sbjct: 469 MQYNSPQLRTLLGQDFSLMSDASQQMQQQHSFRNSGFGVVESGNVGRESEGQGQPLRHFF 528

Query: 285 DDWPRSTRDTPAMTWNDIXXXXXXXXXXTTQLSISIPI-TSDFS 413
           DDWPRS RD   ++W+D+          TTQLSISIP+ +SDFS
Sbjct: 529 DDWPRS-RDAFTLSWSDVEEDRSNRSSSTTQLSISIPMASSDFS 571