BLASTX nr result
ID: Ephedra29_contig00019688
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00019688
(685 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_011625875.1 PREDICTED: glycine-rich RNA-binding protein 3, mi... 81 5e-16
XP_012070705.1 PREDICTED: glycine-rich RNA-binding protein 2 [Ja... 82 3e-15
XP_006657815.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 77 1e-14
XP_013625756.1 PREDICTED: ELAV-like protein 2 [Brassica oleracea... 77 2e-14
XP_012434427.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 77 3e-14
XP_020096302.1 glycine-rich RNA-binding protein 2, mitochondrial... 77 3e-14
XP_003573359.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 77 3e-14
XP_006659102.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 76 5e-14
XP_006281245.1 hypothetical protein CARUB_v10027288mg [Capsella ... 77 5e-14
ACN41115.1 unknown [Picea sitchensis] 76 6e-14
XP_018465666.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 76 6e-14
XP_007021155.2 PREDICTED: glycine-rich RNA-binding protein 4, mi... 76 7e-14
XP_010448336.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 76 7e-14
EOY12680.1 RNA-binding family protein [Theobroma cacao] 76 7e-14
JAU11641.1 Putative DEAD-box ATP-dependent RNA helicase 33 [Nocc... 76 7e-14
XP_016738166.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 76 7e-14
XP_017627847.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 76 7e-14
XP_011624062.1 PREDICTED: glycine-rich RNA-binding protein 3, mi... 75 8e-14
XP_013733631.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 76 9e-14
CDY42466.1 BnaA10g08420D [Brassica napus] 76 9e-14
>XP_011625875.1 PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial
isoform X2 [Amborella trichopoda]
Length = 130
Score = 81.3 bits (199), Expect = 5e-16
Identities = 46/115 (40%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Frame = -3
Query: 584 IRAEMGFNVGSLKSIVQTRFLKLPPSPQDIPPTVE----LFVSGLDRNKSSKDLRNMFAQ 417
+RA +G V L S + F+ PPSP PP E LFVSGL + +++ LR F++
Sbjct: 3 LRARLGIEVRRLYSSYASSFVP-PPSPTPPPPPAEPSTNLFVSGLSKRTTTEGLREAFSK 61
Query: 416 FGELLEASIVTNTQTGRPRGVGFVXXXXXXXXXXXXXAMDGKFLDGRVIFADYSK 252
FG+++ A +VT+ +G +G GFV MDGKFLDG VIFA+Y++
Sbjct: 62 FGQVVHARVVTDRVSGYSKGFGFVKYATQEEAAEGIAGMDGKFLDGWVIFAEYAR 116
>XP_012070705.1 PREDICTED: glycine-rich RNA-binding protein 2 [Jatropha curcas]
KDP39011.1 hypothetical protein JCGZ_00768 [Jatropha
curcas]
Length = 277
Score = 82.4 bits (202), Expect = 3e-15
Identities = 40/105 (38%), Positives = 62/105 (59%)
Frame = -3
Query: 566 FNVGSLKSIVQTRFLKLPPSPQDIPPTVELFVSGLDRNKSSKDLRNMFAQFGELLEASIV 387
F+ S S + + + P + + PP +LFVSGL++ +++ L+ F+QFGE++ A +V
Sbjct: 21 FSTSSFSSFIPPQTKETPSARETAPPNCQLFVSGLNKRTTTEKLKESFSQFGEVVHAKVV 80
Query: 386 TNTQTGRPRGVGFVXXXXXXXXXXXXXAMDGKFLDGRVIFADYSK 252
T+ +G +G GFV MDGKFLDG VIFA+YS+
Sbjct: 81 TDRVSGYSKGFGFVRYATIEDAAKAIQGMDGKFLDGWVIFAEYSR 125
>XP_006657815.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Oryza brachyantha]
Length = 130
Score = 77.4 bits (189), Expect = 1e-14
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Frame = -3
Query: 515 PPSPQDIPPTVE----LFVSGLDRNKSSKDLRNMFAQFGELLEASIVTNTQTGRPRGVGF 348
PP P P E LFVSGL++ +S+ LR F++FG+++EA ++T+ +G RG GF
Sbjct: 21 PPPPPAARPAAEPCNNLFVSGLNKRTTSEGLREAFSKFGQVIEARVITDRISGYSRGFGF 80
Query: 347 VXXXXXXXXXXXXXAMDGKFLDGRVIFADYSKYENT 240
V MDGKFLDG VIFA+Y+K T
Sbjct: 81 VKYATVIEAGEGIKGMDGKFLDGWVIFAEYAKQRET 116
>XP_013625756.1 PREDICTED: ELAV-like protein 2 [Brassica oleracea var. oleracea]
XP_013640715.1 PREDICTED: ELAV-like protein 2 [Brassica
napus]
Length = 153
Score = 77.4 bits (189), Expect = 2e-14
Identities = 39/87 (44%), Positives = 52/87 (59%)
Frame = -3
Query: 512 PSPQDIPPTVELFVSGLDRNKSSKDLRNMFAQFGELLEASIVTNTQTGRPRGVGFVXXXX 333
P+ PT LFVSGL + +S+ LR FAQFGE+ +A +VT+ +G +G GFV
Sbjct: 47 PARPQADPTTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYAT 106
Query: 332 XXXXXXXXXAMDGKFLDGRVIFADYSK 252
MDGKFLDG VIFA+Y++
Sbjct: 107 LEDSAKGIAGMDGKFLDGWVIFAEYAR 133
>XP_012434427.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Gossypium raimondii] XP_016716679.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial-like
[Gossypium hirsutum] KJB45626.1 hypothetical protein
B456_007G316900 [Gossypium raimondii]
Length = 157
Score = 77.4 bits (189), Expect = 3e-14
Identities = 37/87 (42%), Positives = 53/87 (60%)
Frame = -3
Query: 512 PSPQDIPPTVELFVSGLDRNKSSKDLRNMFAQFGELLEASIVTNTQTGRPRGVGFVXXXX 333
P + PP+ LFVSGL++ S+ LR F+QFG +++A +VT+ +G +G GFV
Sbjct: 47 PGREQAPPSTNLFVSGLNKRTQSEKLREAFSQFGRVIDARVVTDRVSGYSKGFGFVRYAT 106
Query: 332 XXXXXXXXXAMDGKFLDGRVIFADYSK 252
MDGKFLDG VIFA+Y++
Sbjct: 107 VEEAEKGRVGMDGKFLDGWVIFAEYAR 133
>XP_020096302.1 glycine-rich RNA-binding protein 2, mitochondrial-like [Ananas
comosus] OAY82106.1 Glycine-rich RNA-binding protein 3,
mitochondrial [Ananas comosus]
Length = 131
Score = 76.6 bits (187), Expect = 3e-14
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Frame = -3
Query: 515 PPSPQDIPPTVE----LFVSGLDRNKSSKDLRNMFAQFGELLEASIVTNTQTGRPRGVGF 348
PP P P VE LFVSGL++ +S+ LR FA+FG++++A ++T+ +G RG GF
Sbjct: 21 PPPPAAARPAVEPSTNLFVSGLNKRTTSETLRETFAKFGQIVDARVITDRVSGYSRGFGF 80
Query: 347 VXXXXXXXXXXXXXAMDGKFLDGRVIFADYSK 252
V MDGKFLDG VIFA+Y++
Sbjct: 81 VRYASIEEAEAGIKGMDGKFLDGWVIFAEYAR 112
>XP_003573359.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Brachypodium distachyon] KQJ95009.1 hypothetical
protein BRADI_3g14640 [Brachypodium distachyon]
Length = 153
Score = 77.0 bits (188), Expect = 3e-14
Identities = 41/92 (44%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Frame = -3
Query: 515 PPSPQDIPPTVE----LFVSGLDRNKSSKDLRNMFAQFGELLEASIVTNTQTGRPRGVGF 348
PPSP PP + LFVSGL + ++ LR FA+FGE++ A +VT+ TG +G GF
Sbjct: 34 PPSPPTPPPKADPSPNLFVSGLSKRTTTDGLREAFAKFGEVMHARVVTDRVTGFSKGFGF 93
Query: 347 VXXXXXXXXXXXXXAMDGKFLDGRVIFADYSK 252
V MDGKFLDG VIFA+Y++
Sbjct: 94 VRYASVEDASKGIEGMDGKFLDGWVIFAEYAR 125
>XP_006659102.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Oryza brachyantha]
Length = 141
Score = 76.3 bits (186), Expect = 5e-14
Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Frame = -3
Query: 515 PPSPQDIPPTVE----LFVSGLDRNKSSKDLRNMFAQFGELLEASIVTNTQTGRPRGVGF 348
PP P PP + LFVSGL + ++ LR FA+FGE+L A +VT+ TG +G GF
Sbjct: 22 PPKPPTPPPKADPSPNLFVSGLSKRTTTDGLREAFAKFGEVLHARVVTDRVTGFSKGFGF 81
Query: 347 VXXXXXXXXXXXXXAMDGKFLDGRVIFADYSK 252
V MDGKFLDG VIFA+Y++
Sbjct: 82 VRYATVEDAAKGIEGMDGKFLDGWVIFAEYAR 113
>XP_006281245.1 hypothetical protein CARUB_v10027288mg [Capsella rubella]
EOA14143.1 hypothetical protein CARUB_v10027288mg
[Capsella rubella]
Length = 156
Score = 76.6 bits (187), Expect = 5e-14
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Frame = -3
Query: 620 DVMISSLGLSRYIRAEMG-FNVGSLKSIVQTRFLKLPPSPQDIPPTVELFVSGLDRNKSS 444
+V ++ +GL R + F+ S ++ QT P PQ P T LFVSGL + +S
Sbjct: 16 EVALAPVGLRRLFCSNASRFSFLSPQAETQT-----PARPQAEPST-NLFVSGLSKRTTS 69
Query: 443 KDLRNMFAQFGELLEASIVTNTQTGRPRGVGFVXXXXXXXXXXXXXAMDGKFLDGRVIFA 264
+ LR FAQFGE+ +A +VT+ +G +G GFV MDGKFLDG VIFA
Sbjct: 70 EGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYTTLEDSAKGIAGMDGKFLDGWVIFA 129
Query: 263 DYSK 252
+Y++
Sbjct: 130 EYAR 133
>ACN41115.1 unknown [Picea sitchensis]
Length = 149
Score = 76.3 bits (186), Expect = 6e-14
Identities = 38/79 (48%), Positives = 51/79 (64%)
Frame = -3
Query: 488 TVELFVSGLDRNKSSKDLRNMFAQFGELLEASIVTNTQTGRPRGVGFVXXXXXXXXXXXX 309
T +LF+SGL R + + LR F++FG+L+EA +VT+ +GR RG GFV
Sbjct: 43 TTKLFISGLSRQTTDEGLRAKFSEFGQLVEARVVTDRISGRSRGFGFVRYATLEDAAKGK 102
Query: 308 XAMDGKFLDGRVIFADYSK 252
MDGKFLDG VIFAD++K
Sbjct: 103 EGMDGKFLDGWVIFADFAK 121
>XP_018465666.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Raphanus sativus]
Length = 152
Score = 76.3 bits (186), Expect = 6e-14
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = -3
Query: 512 PSPQDIPPTVELFVSGLDRNKSSKDLRNMFAQFGELLEASIVTNTQTGRPRGVGFVXXXX 333
P+ P+ LFVSGL + +S+ LR FAQFGE+ +A +VT+ +G +G GFV
Sbjct: 43 PARPQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEIADAKVVTDRVSGYSKGFGFVRYTT 102
Query: 332 XXXXXXXXXAMDGKFLDGRVIFADYSK 252
MDGKFLDG VIFA+Y++
Sbjct: 103 LEDSAKGIAGMDGKFLDGWVIFAEYAR 129
>XP_007021155.2 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Theobroma cacao]
Length = 156
Score = 76.3 bits (186), Expect = 7e-14
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = -3
Query: 512 PSPQDIPPTVELFVSGLDRNKSSKDLRNMFAQFGELLEASIVTNTQTGRPRGVGFVXXXX 333
P + PP+ LFVSGL++ + + LR F+QFG++++A +VT+ +G +G GFV
Sbjct: 47 PGREQAPPSTNLFVSGLNKRTTMEKLREAFSQFGQVVDARVVTDRVSGYSKGFGFVRYAT 106
Query: 332 XXXXXXXXXAMDGKFLDGRVIFADYSK 252
MDGKFLDG VIFA+Y++
Sbjct: 107 LEEAEKGREGMDGKFLDGWVIFAEYAR 133
>XP_010448336.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Camelina sativa]
Length = 156
Score = 76.3 bits (186), Expect = 7e-14
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = -3
Query: 512 PSPQDIPPTVELFVSGLDRNKSSKDLRNMFAQFGELLEASIVTNTQTGRPRGVGFVXXXX 333
P+ P+ LFVSGL + +S+ LR FAQFGE+ +A +VT+ +G +G GFV
Sbjct: 47 PARPQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEIADAKVVTDRVSGYSKGFGFVRYTT 106
Query: 332 XXXXXXXXXAMDGKFLDGRVIFADYSK 252
MDGKFLDG VIFA+Y++
Sbjct: 107 LEDSAKGIAGMDGKFLDGWVIFAEYAR 133
>EOY12680.1 RNA-binding family protein [Theobroma cacao]
Length = 156
Score = 76.3 bits (186), Expect = 7e-14
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = -3
Query: 512 PSPQDIPPTVELFVSGLDRNKSSKDLRNMFAQFGELLEASIVTNTQTGRPRGVGFVXXXX 333
P + PP+ LFVSGL++ + + LR F+QFG++++A +VT+ +G +G GFV
Sbjct: 47 PGREQAPPSTNLFVSGLNKRTTMEKLREAFSQFGQVVDARVVTDRVSGYSKGFGFVRYAT 106
Query: 332 XXXXXXXXXAMDGKFLDGRVIFADYSK 252
MDGKFLDG VIFA+Y++
Sbjct: 107 LEEAEKGREGMDGKFLDGWVIFAEYAR 133
>JAU11641.1 Putative DEAD-box ATP-dependent RNA helicase 33 [Noccaea
caerulescens] JAU41202.1 Putative DEAD-box ATP-dependent
RNA helicase 33 [Noccaea caerulescens] JAU68243.1
Putative DEAD-box ATP-dependent RNA helicase 33 [Noccaea
caerulescens] JAU77947.1 Putative DEAD-box ATP-dependent
RNA helicase 33 [Noccaea caerulescens]
Length = 157
Score = 76.3 bits (186), Expect = 7e-14
Identities = 39/94 (41%), Positives = 53/94 (56%)
Frame = -3
Query: 512 PSPQDIPPTVELFVSGLDRNKSSKDLRNMFAQFGELLEASIVTNTQTGRPRGVGFVXXXX 333
P+ P+ LFVSGL + +S+ LR FAQFGE+ +A +VT+ +G +G GFV
Sbjct: 47 PARPQADPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYAT 106
Query: 332 XXXXXXXXXAMDGKFLDGRVIFADYSKYENTDST 231
MDGKFLDG VIFA+Y++ T
Sbjct: 107 LEDSAKGIAGMDGKFLDGWVIFAEYARPREPSQT 140
>XP_016738166.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Gossypium hirsutum]
Length = 157
Score = 76.3 bits (186), Expect = 7e-14
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = -3
Query: 512 PSPQDIPPTVELFVSGLDRNKSSKDLRNMFAQFGELLEASIVTNTQTGRPRGVGFVXXXX 333
P + PP+ LFVSGL++ +S+ LR F+QFG +++A +VT+ +G +G GFV
Sbjct: 47 PGREQAPPSTNLFVSGLNKRTNSEKLREAFSQFGRVIDARVVTDRVSGYSKGFGFVRYAT 106
Query: 332 XXXXXXXXXAMDGKFLDGRVIFADYSK 252
MDGKFL+G VIFA+Y++
Sbjct: 107 IEEAEKGRVGMDGKFLEGWVIFAEYAR 133
>XP_017627847.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Gossypium arboreum] KHG12372.1 Glycine-rich RNA-binding
2, mitochondrial -like protein [Gossypium arboreum]
Length = 157
Score = 76.3 bits (186), Expect = 7e-14
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = -3
Query: 512 PSPQDIPPTVELFVSGLDRNKSSKDLRNMFAQFGELLEASIVTNTQTGRPRGVGFVXXXX 333
P + PP+ LFVSGL++ +S+ LR F+QFG +++A +VT+ +G +G GFV
Sbjct: 47 PGREQAPPSTNLFVSGLNKRTNSEKLREAFSQFGRVIDARVVTDRVSGYSKGFGFVRYAT 106
Query: 332 XXXXXXXXXAMDGKFLDGRVIFADYSK 252
MDGKFL+G VIFA+Y++
Sbjct: 107 IEEAEKGRVGMDGKFLEGWVIFAEYAR 133
>XP_011624062.1 PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Amborella trichopoda]
Length = 132
Score = 75.5 bits (184), Expect = 8e-14
Identities = 38/88 (43%), Positives = 56/88 (63%)
Frame = -3
Query: 515 PPSPQDIPPTVELFVSGLDRNKSSKDLRNMFAQFGELLEASIVTNTQTGRPRGVGFVXXX 336
PP+P +P T LFVSGL++ +S+ LR F +FGE+++A +VT+ +G +G GFV
Sbjct: 31 PPNPPAVPST-SLFVSGLNKRTTSEKLREAFLKFGEVVQARVVTDRVSGYSKGFGFVRYA 89
Query: 335 XXXXXXXXXXAMDGKFLDGRVIFADYSK 252
MDG+FLDG VIFA+Y++
Sbjct: 90 TLEEAEAGIKGMDGQFLDGWVIFAEYAR 117
>XP_013733631.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Brassica napus]
Length = 153
Score = 75.9 bits (185), Expect = 9e-14
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = -3
Query: 512 PSPQDIPPTVELFVSGLDRNKSSKDLRNMFAQFGELLEASIVTNTQTGRPRGVGFVXXXX 333
P+ P+ LFVSGL + +S+ LR FAQFGE+ +A +VT+ +G +G GFV
Sbjct: 47 PARPQADPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYAT 106
Query: 332 XXXXXXXXXAMDGKFLDGRVIFADYSK 252
MDGKFLDG VIFA+Y++
Sbjct: 107 LEDSAKGIAGMDGKFLDGWVIFAEYAR 133
>CDY42466.1 BnaA10g08420D [Brassica napus]
Length = 153
Score = 75.9 bits (185), Expect = 9e-14
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = -3
Query: 512 PSPQDIPPTVELFVSGLDRNKSSKDLRNMFAQFGELLEASIVTNTQTGRPRGVGFVXXXX 333
P+ P+ LFVSGL + +S+ LR FAQFGE+ +A +VT+ +G +G GFV
Sbjct: 47 PARPQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYTT 106
Query: 332 XXXXXXXXXAMDGKFLDGRVIFADYSK 252
MDGKFLDG VIFA+Y++
Sbjct: 107 LEDSAKGIAGMDGKFLDGWVIFAEYAR 133