BLASTX nr result
ID: Ephedra29_contig00019577
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00019577
(212 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AFG46471.1 hypothetical protein 0_8711_01, partial [Pinus taeda] 57 1e-08
AFG46470.1 hypothetical protein 0_8711_01, partial [Pinus taeda]... 54 8e-08
XP_011025626.1 PREDICTED: pentatricopeptide repeat-containing pr... 57 1e-07
XP_002310592.2 pentatricopeptide repeat-containing family protei... 57 1e-07
AEW07684.1 hypothetical protein 0_8711_01, partial [Pinus radiat... 54 1e-07
XP_010272458.1 PREDICTED: pentatricopeptide repeat-containing pr... 56 2e-07
XP_011013430.1 PREDICTED: pentatricopeptide repeat-containing pr... 56 2e-07
XP_011627107.1 PREDICTED: pentatricopeptide repeat-containing pr... 55 4e-07
AEX11932.1 hypothetical protein 0_18068_02, partial [Pinus taeda... 52 5e-07
JAU26012.1 Pentatricopeptide repeat-containing protein, partial ... 52 5e-07
KHN19945.1 Putative pentatricopeptide repeat-containing protein ... 55 5e-07
XP_003549001.1 PREDICTED: putative pentatricopeptide repeat-cont... 55 5e-07
ONK75658.1 uncharacterized protein A4U43_C03F19190 [Asparagus of... 53 6e-07
XP_004288724.2 PREDICTED: pentatricopeptide repeat-containing pr... 54 7e-07
XP_015582625.1 PREDICTED: pentatricopeptide repeat-containing pr... 54 9e-07
GAU34637.1 hypothetical protein TSUD_394280 [Trifolium subterran... 54 9e-07
AEX11933.1 hypothetical protein 0_18068_02, partial [Pinus taeda] 51 9e-07
XP_003613787.1 pentatricopeptide (PPR) repeat protein [Medicago ... 54 9e-07
KDP35211.1 hypothetical protein JCGZ_09370 [Jatropha curcas] 54 9e-07
CDP01390.1 unnamed protein product [Coffea canephora] 54 1e-06
>AFG46471.1 hypothetical protein 0_8711_01, partial [Pinus taeda]
Length = 111
Score = 56.6 bits (135), Expect = 1e-08
Identities = 26/43 (60%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Frame = -1
Query: 149 HSEKLSFTFRIISTQRNT-IEILKNLRVCDYCHNATKFVEIII 24
HSEKL+ F +I+T R+T I+I KNLRVCD CH+ATKF+ +I+
Sbjct: 43 HSEKLAIAFGLITTNRDTPIQITKNLRVCDDCHSATKFISMIL 85
>AFG46470.1 hypothetical protein 0_8711_01, partial [Pinus taeda] AFG46480.1
hypothetical protein 0_8711_01, partial [Pinus taeda]
Length = 111
Score = 54.3 bits (129), Expect = 8e-08
Identities = 25/43 (58%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Frame = -1
Query: 149 HSEKLSFTFRIISTQRNT-IEILKNLRVCDYCHNATKFVEIII 24
HSEKL+ F +I+T +T I+I KNLRVCD CH+ATKF+ +I+
Sbjct: 43 HSEKLAIAFGLITTNPDTPIQITKNLRVCDECHSATKFISMIL 85
>XP_011025626.1 PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Populus euphratica]
Length = 785
Score = 56.6 bits (135), Expect = 1e-07
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -1
Query: 158 LRIHSEKLSFTFRIISTQRNT-IEILKNLRVCDYCHNATKFVEIII 24
LR HSEKL+ F IIST NT + I+KNLRVC+ CHNA KF+ ++
Sbjct: 714 LRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLV 759
>XP_002310592.2 pentatricopeptide repeat-containing family protein [Populus
trichocarpa] EEE91042.2 pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 785
Score = 56.6 bits (135), Expect = 1e-07
Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = -1
Query: 158 LRIHSEKLSFTFRIISTQRNT-IEILKNLRVCDYCHNATKFVEIII 24
LR HSEKL+ F IIST NT + I+KNLRVC+ CHNA KF+ ++
Sbjct: 714 LRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLV 759
>AEW07684.1 hypothetical protein 0_8711_01, partial [Pinus radiata] AFG46465.1
hypothetical protein 0_8711_01, partial [Pinus taeda]
AFG46466.1 hypothetical protein 0_8711_01, partial
[Pinus taeda] AFG46467.1 hypothetical protein 0_8711_01,
partial [Pinus taeda] AFG46468.1 hypothetical protein
0_8711_01, partial [Pinus taeda] AFG46469.1 hypothetical
protein 0_8711_01, partial [Pinus taeda] AFG46472.1
hypothetical protein 0_8711_01, partial [Pinus taeda]
AFG46473.1 hypothetical protein 0_8711_01, partial
[Pinus taeda] AFG46474.1 hypothetical protein 0_8711_01,
partial [Pinus taeda] AFG46475.1 hypothetical protein
0_8711_01, partial [Pinus taeda] AFG46476.1 hypothetical
protein 0_8711_01, partial [Pinus taeda] AFG46477.1
hypothetical protein 0_8711_01, partial [Pinus taeda]
AFG46478.1 hypothetical protein 0_8711_01, partial
[Pinus taeda] AFG46479.1 hypothetical protein 0_8711_01,
partial [Pinus taeda] AFG46481.1 hypothetical protein
0_8711_01, partial [Pinus taeda] AFG46482.1 hypothetical
protein 0_8711_01, partial [Pinus taeda]
Length = 111
Score = 53.9 bits (128), Expect = 1e-07
Identities = 25/43 (58%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Frame = -1
Query: 149 HSEKLSFTFRIISTQRNT-IEILKNLRVCDYCHNATKFVEIII 24
HSEKL+ F +I+T +T I+I KNLRVCD CH+ATKF+ +I+
Sbjct: 43 HSEKLAIAFGLITTNPDTPIQITKNLRVCDDCHSATKFISMIL 85
>XP_010272458.1 PREDICTED: pentatricopeptide repeat-containing protein At2g33760
[Nelumbo nucifera] XP_010272459.1 PREDICTED:
pentatricopeptide repeat-containing protein At2g33760
[Nelumbo nucifera]
Length = 594
Score = 55.8 bits (133), Expect = 2e-07
Identities = 26/45 (57%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = -1
Query: 158 LRIHSEKLSFTFRIISTQRNT-IEILKNLRVCDYCHNATKFVEII 27
LR HSEKL+ F I++T T I I+KNLR+CD CH+ATKF+ I+
Sbjct: 523 LRCHSEKLAIAFGIMNTSHGTTIRIVKNLRMCDDCHSATKFISIV 567
>XP_011013430.1 PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like, partial [Populus euphratica]
Length = 758
Score = 55.8 bits (133), Expect = 2e-07
Identities = 27/42 (64%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = -1
Query: 158 LRIHSEKLSFTFRIISTQRNT-IEILKNLRVCDYCHNATKFV 36
LR HSEKL+ F IIST NT + I+KNLRVC+ CHNA KF+
Sbjct: 714 LRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFI 755
>XP_011627107.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Amborella trichopoda]
Length = 786
Score = 55.1 bits (131), Expect = 4e-07
Identities = 25/45 (55%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = -1
Query: 158 LRIHSEKLSFTFRIISTQR-NTIEILKNLRVCDYCHNATKFVEII 27
+R+HSEKL+ +IST+ +TI I+KNLRVC CHNATKF+ ++
Sbjct: 715 VRVHSEKLAIVLGLISTEPGSTIRIIKNLRVCSDCHNATKFMSMV 759
>AEX11932.1 hypothetical protein 0_18068_02, partial [Pinus taeda] AEX11934.1
hypothetical protein 0_18068_02, partial [Pinus taeda]
AEX11935.1 hypothetical protein 0_18068_02, partial
[Pinus taeda] AEX11936.1 hypothetical protein
0_18068_02, partial [Pinus taeda] AEX11937.1
hypothetical protein 0_18068_02, partial [Pinus taeda]
AEX11938.1 hypothetical protein 0_18068_02, partial
[Pinus taeda] AEX11939.1 hypothetical protein
0_18068_02, partial [Pinus taeda] AEX11940.1
hypothetical protein 0_18068_02, partial [Pinus taeda]
AEX11941.1 hypothetical protein 0_18068_02, partial
[Pinus taeda] AEX11942.1 hypothetical protein
0_18068_02, partial [Pinus taeda]
Length = 80
Score = 51.6 bits (122), Expect = 5e-07
Identities = 25/43 (58%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Frame = -1
Query: 149 HSEKLSFTFRIISTQRNT-IEILKNLRVCDYCHNATKFVEIII 24
HSEKL+ +F II+T T I I+KNLRVC+ CHNAT F+ I+
Sbjct: 12 HSEKLAISFGIINTNPGTPIRIMKNLRVCNDCHNATTFISKIV 54
>JAU26012.1 Pentatricopeptide repeat-containing protein, partial [Noccaea
caerulescens]
Length = 82
Score = 51.6 bits (122), Expect = 5e-07
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -1
Query: 158 LRIHSEKLSFTFRIIST-QRNTIEILKNLRVCDYCHNATKFVEIII 24
LR HSEKL+ F +IST + T+ I+KNLRVC+ CH A KF+ ++
Sbjct: 16 LRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLV 61
>KHN19945.1 Putative pentatricopeptide repeat-containing protein [Glycine soja]
Length = 673
Score = 54.7 bits (130), Expect = 5e-07
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = -1
Query: 170 K*CDLRIHSEKLSFTFRIISTQRNTIEILKNLRVCDYCHNATKFVEIII 24
K C L +HSEKL+ F I++TQ + I I KNLRVC CH A K + I+
Sbjct: 599 KECHLAVHSEKLAIVFAILNTQESPIRITKNLRVCGDCHIAAKLISKIV 647
>XP_003549001.1 PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142 [Glycine max] KRH08766.1 hypothetical protein
GLYMA_16G172800 [Glycine max]
Length = 673
Score = 54.7 bits (130), Expect = 5e-07
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = -1
Query: 170 K*CDLRIHSEKLSFTFRIISTQRNTIEILKNLRVCDYCHNATKFVEIII 24
K C L +HSEKL+ F I++TQ + I I KNLRVC CH A K + I+
Sbjct: 599 KECHLAVHSEKLAIVFAILNTQESPIRITKNLRVCGDCHIAAKLISKIV 647
>ONK75658.1 uncharacterized protein A4U43_C03F19190 [Asparagus officinalis]
Length = 161
Score = 53.1 bits (126), Expect = 6e-07
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 7/57 (12%)
Frame = -1
Query: 158 LRIHSEKLSFTFRIIST-QRNTIEILKNLRVCDYCHNATKFV------EIII*DFSQ 9
L +HSE+L+ F IIST + TI I KNLRVC CH ATKF+ EII+ D+++
Sbjct: 90 LTMHSERLAIAFGIISTLPKTTIHIFKNLRVCGDCHTATKFISRITEREIIVRDYNR 146
>XP_004288724.2 PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Fragaria vesca subsp. vesca]
Length = 806
Score = 54.3 bits (129), Expect = 7e-07
Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = -1
Query: 158 LRIHSEKLSFTFRIISTQRNT-IEILKNLRVCDYCHNATKFVEII 27
+ +HSEKL+ F +IST T I I+KNLRVC CHNATKF+ +I
Sbjct: 735 MNVHSEKLAIAFALISTAPGTEIRIIKNLRVCLDCHNATKFISMI 779
>XP_015582625.1 PREDICTED: pentatricopeptide repeat-containing protein At2g22070
[Ricinus communis]
Length = 301
Score = 53.9 bits (128), Expect = 9e-07
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 7/57 (12%)
Frame = -1
Query: 158 LRIHSEKLSFTFRIISTQRNT-IEILKNLRVCDYCHNATKFV------EIII*DFSQ 9
LR HSEKL+ F +IST +NT + I+KNLRVC+ CH A KF+ EII+ D ++
Sbjct: 230 LRYHSEKLAIAFGLISTPQNTTLRIMKNLRVCNDCHTAIKFISKLMGREIIVRDVTR 286
>GAU34637.1 hypothetical protein TSUD_394280 [Trifolium subterraneum]
Length = 504
Score = 53.9 bits (128), Expect = 9e-07
Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = -1
Query: 158 LRIHSEKLSFTFRIISTQRNT-IEILKNLRVCDYCHNATKFVEII 27
LR HSEKL+ TF +++T T I ++KNLRVC CHNA KF+ +I
Sbjct: 433 LRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHNAAKFISLI 477
>AEX11933.1 hypothetical protein 0_18068_02, partial [Pinus taeda]
Length = 80
Score = 50.8 bits (120), Expect = 9e-07
Identities = 25/43 (58%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = -1
Query: 149 HSEKLSFTFRIISTQRNT-IEILKNLRVCDYCHNATKFVEIII 24
HSEKL+ F II+T T I I+KNLRVC+ CHNAT F+ I+
Sbjct: 12 HSEKLAIRFGIINTNPGTPIRIMKNLRVCNDCHNATTFISKIV 54
>XP_003613787.1 pentatricopeptide (PPR) repeat protein [Medicago truncatula]
AES96745.1 pentatricopeptide (PPR) repeat protein
[Medicago truncatula]
Length = 586
Score = 53.9 bits (128), Expect = 9e-07
Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = -1
Query: 158 LRIHSEKLSFTFRIISTQRNT-IEILKNLRVCDYCHNATKFVEII 27
LR HSEKL+ TF +++T T I ++KNLRVC CHNA KF+ +I
Sbjct: 515 LRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHNAAKFISLI 559
>KDP35211.1 hypothetical protein JCGZ_09370 [Jatropha curcas]
Length = 663
Score = 53.9 bits (128), Expect = 9e-07
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 7/57 (12%)
Frame = -1
Query: 158 LRIHSEKLSFTFRIISTQRNT-IEILKNLRVCDYCHNATKFV------EIII*DFSQ 9
LR HSEKL+ F IIST NT + I+KNLR+C+ CH A KF+ EII+ D ++
Sbjct: 592 LRYHSEKLAIAFGIISTPENTTLRIMKNLRICNDCHTAIKFISKLMGREIIVRDVTR 648
>CDP01390.1 unnamed protein product [Coffea canephora]
Length = 712
Score = 53.9 bits (128), Expect = 1e-06
Identities = 24/46 (52%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -1
Query: 158 LRIHSEKLSFTFRIIST-QRNTIEILKNLRVCDYCHNATKFVEIII 24
LR HSEKL+ TF +I+T +++T+ I+KNLRVC+ CH+A KF+ ++
Sbjct: 641 LRHHSEKLAITFGLINTPEKSTLRIMKNLRVCNDCHSAIKFISKLV 686