BLASTX nr result
ID: Ephedra29_contig00019506
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00019506
(316 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EAY94887.1 hypothetical protein OsI_16687 [Oryza sativa Indica G... 60 3e-08
XP_015612635.1 PREDICTED: chloroplastic group IIA intron splicin... 60 3e-08
XP_012069764.1 PREDICTED: chloroplastic group IIA intron splicin... 59 6e-08
XP_003554854.1 PREDICTED: chloroplastic group IIA intron splicin... 58 2e-07
KRG93411.1 hypothetical protein GLYMA_19G014100 [Glycine max] 58 2e-07
XP_010255197.1 PREDICTED: CRM-domain containing factor CFM2, chl... 58 2e-07
XP_010265125.1 PREDICTED: CRM-domain containing factor CFM3, chl... 57 2e-07
KDP33843.1 hypothetical protein JCGZ_07414 [Jatropha curcas] 57 2e-07
XP_012077525.1 PREDICTED: uncharacterized protein LOC105638343 [... 57 2e-07
XP_004291748.1 PREDICTED: chloroplastic group IIA intron splicin... 56 6e-07
OAY55643.1 hypothetical protein MANES_03G169200 [Manihot esculenta] 56 6e-07
KYP60835.1 hypothetical protein KK1_023249 [Cajanus cajan] 56 8e-07
JAT61837.1 Chloroplastic group IIA intron splicing facilitator C... 56 8e-07
EEF45180.1 conserved hypothetical protein [Ricinus communis] 55 1e-06
XP_009767017.1 PREDICTED: chloroplastic group IIA intron splicin... 55 1e-06
XP_010548668.1 PREDICTED: CRM-domain containing factor CFM3, chl... 55 1e-06
XP_010548667.1 PREDICTED: CRM-domain containing factor CFM3, chl... 55 1e-06
XP_015573524.1 PREDICTED: chloroplastic group IIA intron splicin... 55 1e-06
XP_015573523.1 PREDICTED: chloroplastic group IIA intron splicin... 55 1e-06
XP_015573522.1 PREDICTED: chloroplastic group IIA intron splicin... 55 1e-06
>EAY94887.1 hypothetical protein OsI_16687 [Oryza sativa Indica Group]
Length = 893
Score = 59.7 bits (143), Expect = 3e-08
Identities = 27/81 (33%), Positives = 46/81 (56%)
Frame = -2
Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
++V G L + IH W+ EVV+++ ++ +LEE++GGIV+W+
Sbjct: 359 MRVGPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTHDILEERTGGIVIWRSGRS 418
Query: 129 IGLYRGLNYNARQLRASNHTT 67
+ LYRG+NYN R +++ TT
Sbjct: 419 VVLYRGMNYNLRCVQSYTQTT 439
>XP_015612635.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic [Oryza sativa Japonica Group]
XP_015612636.1 PREDICTED: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic [Oryza sativa
Japonica Group] BAD23409.1 putative CRS1 [Oryza sativa
Japonica Group] BAD33710.1 putative CRS1 [Oryza sativa
Japonica Group] BAF24904.1 Os09g0363100 [Oryza sativa
Japonica Group] EAZ31373.1 hypothetical protein
OsJ_15500 [Oryza sativa Japonica Group] BAT07711.1
Os09g0363100 [Oryza sativa Japonica Group]
Length = 947
Score = 59.7 bits (143), Expect = 3e-08
Identities = 27/81 (33%), Positives = 46/81 (56%)
Frame = -2
Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
++V G L + IH W+ EVV+++ ++ +LEE++GGIV+W+
Sbjct: 360 MRVGPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTHDILEERTGGIVIWRSGRS 419
Query: 129 IGLYRGLNYNARQLRASNHTT 67
+ LYRG+NYN R +++ TT
Sbjct: 420 VVLYRGMNYNLRCVQSYTQTT 440
>XP_012069764.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic [Jatropha curcas] KDP40278.1
hypothetical protein JCGZ_02276 [Jatropha curcas]
Length = 939
Score = 58.9 bits (141), Expect = 6e-08
Identities = 26/83 (31%), Positives = 45/83 (54%)
Frame = -2
Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
++V G IH W+ SE+VRVK+ +R + +LE K+GG+V+W+
Sbjct: 227 VRVKGAGVTQEVVDTIHEKWKTSEIVRVKVEGAPALNMRRMHEILERKTGGLVIWRSGTS 286
Query: 129 IGLYRGLNYNARQLRASNHTTRR 61
+ LYRG++Y ++ S + +R
Sbjct: 287 VSLYRGVSYEVPSVKLSKRSLKR 309
>XP_003554854.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max] KRG93410.1
hypothetical protein GLYMA_19G014100 [Glycine max]
Length = 1028
Score = 57.8 bits (138), Expect = 2e-07
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Frame = -2
Query: 315 KVIKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMS 136
K +++ K G + +IH W+ SEVVRV + +R +LE K+GG+VVW+
Sbjct: 166 KKVRLAKAGITEQIVDVIHERWKRSEVVRVFCEELSRDDMRRTHDLLERKTGGLVVWRSG 225
Query: 135 AFIGLYRGLNYN---------ARQLRASNHTTRRVSCQDT-CKVTSREITARN 7
I LYRG +Y RQ SN + V+ D C + ++ +N
Sbjct: 226 TKIILYRGADYKYPYFLSDKVTRQDNTSNDALQHVNADDKYCDKSESHLSEKN 278
>KRG93411.1 hypothetical protein GLYMA_19G014100 [Glycine max]
Length = 1034
Score = 57.8 bits (138), Expect = 2e-07
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Frame = -2
Query: 315 KVIKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMS 136
K +++ K G + +IH W+ SEVVRV + +R +LE K+GG+VVW+
Sbjct: 166 KKVRLAKAGITEQIVDVIHERWKRSEVVRVFCEELSRDDMRRTHDLLERKTGGLVVWRSG 225
Query: 135 AFIGLYRGLNYN---------ARQLRASNHTTRRVSCQDT-CKVTSREITARN 7
I LYRG +Y RQ SN + V+ D C + ++ +N
Sbjct: 226 TKIILYRGADYKYPYFLSDKVTRQDNTSNDALQHVNADDKYCDKSESHLSEKN 278
>XP_010255197.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic
[Nelumbo nucifera]
Length = 1034
Score = 57.8 bits (138), Expect = 2e-07
Identities = 29/87 (33%), Positives = 46/87 (52%)
Frame = -2
Query: 315 KVIKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMS 136
K +KV K G + IH W+ SE+V+++ ++ +LE K+GG+VVW+
Sbjct: 177 KKLKVGKAGITEGIVNGIHERWRRSELVKIRFEDLCSMNMKRTHDILERKTGGLVVWRSG 236
Query: 135 AFIGLYRGLNYNARQLRASNHTTRRVS 55
+ I LYRG NY +A+ +T S
Sbjct: 237 STIILYRGANYEYPYFKANKNTASDTS 263
>XP_010265125.1 PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial [Nelumbo nucifera]
Length = 838
Score = 57.4 bits (137), Expect = 2e-07
Identities = 22/69 (31%), Positives = 41/69 (59%)
Frame = -2
Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
+ +PK G + + IH W+ SE+VR+K ++ L ++E ++GG+V+W+ +
Sbjct: 252 VNIPKAGVTQVILEKIHEKWRKSELVRLKFHETLAHDMKTALEIVERRTGGLVIWRSGSI 311
Query: 129 IGLYRGLNY 103
+ +YRG NY
Sbjct: 312 MVVYRGSNY 320
>KDP33843.1 hypothetical protein JCGZ_07414 [Jatropha curcas]
Length = 874
Score = 57.4 bits (137), Expect = 2e-07
Identities = 25/70 (35%), Positives = 40/70 (57%)
Frame = -2
Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
IKV G N IH W+ SEVV++K + ++ +LE ++GG+V+W+ +
Sbjct: 286 IKVGAAGINQDLVDAIHENWRLSEVVKLKFEWPLSCNMKRTHEILESRTGGLVIWRSGSS 345
Query: 129 IGLYRGLNYN 100
+ LYRG+ YN
Sbjct: 346 VVLYRGMTYN 355
>XP_012077525.1 PREDICTED: uncharacterized protein LOC105638343 [Jatropha curcas]
Length = 1149
Score = 57.4 bits (137), Expect = 2e-07
Identities = 25/70 (35%), Positives = 40/70 (57%)
Frame = -2
Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
IKV G N IH W+ SEVV++K + ++ +LE ++GG+V+W+ +
Sbjct: 561 IKVGAAGINQDLVDAIHENWRLSEVVKLKFEWPLSCNMKRTHEILESRTGGLVIWRSGSS 620
Query: 129 IGLYRGLNYN 100
+ LYRG+ YN
Sbjct: 621 VVLYRGMTYN 630
>XP_004291748.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 852
Score = 56.2 bits (134), Expect = 6e-07
Identities = 25/88 (28%), Positives = 46/88 (52%)
Frame = -2
Query: 306 KVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAFI 127
K+ G +MIH W+ +E+VR+K+ ++ + +LE K+GG+VVW+ +
Sbjct: 244 KIGGAGVTQAVVEMIHERWKTAEIVRLKIEGPPALNMKRMHEILERKTGGLVVWRSGTSL 303
Query: 126 GLYRGLNYNARQLRASNHTTRRVSCQDT 43
LYRG++Y ++ + +R T
Sbjct: 304 SLYRGVSYEVPSVQLNKQIFKRNEISST 331
>OAY55643.1 hypothetical protein MANES_03G169200 [Manihot esculenta]
Length = 887
Score = 56.2 bits (134), Expect = 6e-07
Identities = 24/83 (28%), Positives = 44/83 (53%)
Frame = -2
Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
++V G IH W+ SE+VRVK+ ++ + +LE K+GG+V+W+
Sbjct: 237 VRVKGAGVTQEVVDTIHERWKASEIVRVKVEGAPALNMKRMHEILERKTGGLVIWRSGTS 296
Query: 129 IGLYRGLNYNARQLRASNHTTRR 61
+ LYRG++Y ++ + +R
Sbjct: 297 VSLYRGVSYEVPSVQVNQRIVKR 319
>KYP60835.1 hypothetical protein KK1_023249 [Cajanus cajan]
Length = 840
Score = 55.8 bits (133), Expect = 8e-07
Identities = 25/93 (26%), Positives = 51/93 (54%)
Frame = -2
Query: 306 KVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAFI 127
++ + G IH W+ SE+VR+K + ++ + +LE K+GG+V+W+ +
Sbjct: 233 RIGRSGVTQAVVDKIHERWKTSEIVRLKFEGEAALNMKRMHEILERKTGGLVIWRSGNSV 292
Query: 126 GLYRGLNYNARQLRASNHTTRRVSCQDTCKVTS 28
LYRG++Y+ ++ + R+ ++T K+ S
Sbjct: 293 SLYRGVSYDVPSVKQNKQIYRK--SENTSKILS 323
>JAT61837.1 Chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic, partial [Anthurium amnicola]
Length = 931
Score = 55.8 bits (133), Expect = 8e-07
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = -2
Query: 306 KVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAFI 127
K+ G MIH W+ EVVR+K ++ + +LE K+GG+V+W+ + I
Sbjct: 288 KIGGAGVTREIVDMIHEKWKTEEVVRLKCEGPPALNMKRMHEILERKTGGLVIWRSGSSI 347
Query: 126 GLYRGLNYNARQ----LRASNHTTRRVS 55
LYRGL + Q S H TR VS
Sbjct: 348 SLYRGLGFELAQPEKSRNQSTHITRVVS 375
>EEF45180.1 conserved hypothetical protein [Ricinus communis]
Length = 773
Score = 55.5 bits (132), Expect = 1e-06
Identities = 25/83 (30%), Positives = 44/83 (53%)
Frame = -2
Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
++V G IH W+ SE+VRVK+ +R + +LE K+GG+V+W+
Sbjct: 124 VRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEGAPALNMRRMHEILERKTGGLVIWRSGTS 183
Query: 129 IGLYRGLNYNARQLRASNHTTRR 61
+ LYRG++Y ++ + +R
Sbjct: 184 VSLYRGVSYEDPSVQLNKQILKR 206
>XP_009767017.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic [Nicotiana sylvestris]
XP_009767027.1 PREDICTED: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic [Nicotiana
sylvestris] XP_016479052.1 PREDICTED: CRM-domain
containing factor CFM3, chloroplastic/mitochondrial-like
[Nicotiana tabacum] XP_016479053.1 PREDICTED: CRM-domain
containing factor CFM3, chloroplastic/mitochondrial-like
[Nicotiana tabacum]
Length = 831
Score = 55.5 bits (132), Expect = 1e-06
Identities = 24/76 (31%), Positives = 42/76 (55%)
Frame = -2
Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
+ VPK G + IH W+ +E+VR+K +R ++E ++GG+V+W+ +
Sbjct: 244 VSVPKAGITGAVLEKIHDAWRKNELVRLKFHEVLAHDMRTGHEIVERRTGGLVIWRAGSV 303
Query: 129 IGLYRGLNYNARQLRA 82
+ +YRG NY LR+
Sbjct: 304 MVVYRGSNYEGPSLRS 319
>XP_010548668.1 PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial isoform X2 [Tarenaya
hassleriana]
Length = 848
Score = 55.5 bits (132), Expect = 1e-06
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = -2
Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
IKV G ++IH W+ EVV++K ++ LE+K+GG+V+W+ +
Sbjct: 271 IKVGSAGVTQALVEVIHEKWKVDEVVKLKFREPLSLNMKRTHETLEKKTGGLVIWRSGSS 330
Query: 129 IGLYRGLNYN---ARQLRASNHTTRRVS 55
+ LYRG+NY + N RR+S
Sbjct: 331 VVLYRGMNYKLPCVQSFIKQNFPDRRIS 358
>XP_010548667.1 PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial isoform X1 [Tarenaya
hassleriana]
Length = 853
Score = 55.5 bits (132), Expect = 1e-06
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = -2
Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
IKV G ++IH W+ EVV++K ++ LE+K+GG+V+W+ +
Sbjct: 271 IKVGSAGVTQALVEVIHEKWKVDEVVKLKFREPLSLNMKRTHETLEKKTGGLVIWRSGSS 330
Query: 129 IGLYRGLNYN---ARQLRASNHTTRRVS 55
+ LYRG+NY + N RR+S
Sbjct: 331 VVLYRGMNYKLPCVQSFIKQNFPDRRIS 358
>XP_015573524.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic isoform X5 [Ricinus communis]
Length = 857
Score = 55.5 bits (132), Expect = 1e-06
Identities = 25/83 (30%), Positives = 44/83 (53%)
Frame = -2
Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
++V G IH W+ SE+VRVK+ +R + +LE K+GG+V+W+
Sbjct: 228 VRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEGAPALNMRRMHEILERKTGGLVIWRSGTS 287
Query: 129 IGLYRGLNYNARQLRASNHTTRR 61
+ LYRG++Y ++ + +R
Sbjct: 288 VSLYRGVSYEDPSVQLNKQILKR 310
>XP_015573523.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic isoform X4 [Ricinus communis]
Length = 886
Score = 55.5 bits (132), Expect = 1e-06
Identities = 25/83 (30%), Positives = 44/83 (53%)
Frame = -2
Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
++V G IH W+ SE+VRVK+ +R + +LE K+GG+V+W+
Sbjct: 228 VRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEGAPALNMRRMHEILERKTGGLVIWRSGTS 287
Query: 129 IGLYRGLNYNARQLRASNHTTRR 61
+ LYRG++Y ++ + +R
Sbjct: 288 VSLYRGVSYEDPSVQLNKQILKR 310
>XP_015573522.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic isoform X3 [Ricinus communis]
Length = 898
Score = 55.5 bits (132), Expect = 1e-06
Identities = 25/83 (30%), Positives = 44/83 (53%)
Frame = -2
Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
++V G IH W+ SE+VRVK+ +R + +LE K+GG+V+W+
Sbjct: 228 VRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEGAPALNMRRMHEILERKTGGLVIWRSGTS 287
Query: 129 IGLYRGLNYNARQLRASNHTTRR 61
+ LYRG++Y ++ + +R
Sbjct: 288 VSLYRGVSYEDPSVQLNKQILKR 310