BLASTX nr result

ID: Ephedra29_contig00019506 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00019506
         (316 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EAY94887.1 hypothetical protein OsI_16687 [Oryza sativa Indica G...    60   3e-08
XP_015612635.1 PREDICTED: chloroplastic group IIA intron splicin...    60   3e-08
XP_012069764.1 PREDICTED: chloroplastic group IIA intron splicin...    59   6e-08
XP_003554854.1 PREDICTED: chloroplastic group IIA intron splicin...    58   2e-07
KRG93411.1 hypothetical protein GLYMA_19G014100 [Glycine max]          58   2e-07
XP_010255197.1 PREDICTED: CRM-domain containing factor CFM2, chl...    58   2e-07
XP_010265125.1 PREDICTED: CRM-domain containing factor CFM3, chl...    57   2e-07
KDP33843.1 hypothetical protein JCGZ_07414 [Jatropha curcas]           57   2e-07
XP_012077525.1 PREDICTED: uncharacterized protein LOC105638343 [...    57   2e-07
XP_004291748.1 PREDICTED: chloroplastic group IIA intron splicin...    56   6e-07
OAY55643.1 hypothetical protein MANES_03G169200 [Manihot esculenta]    56   6e-07
KYP60835.1 hypothetical protein KK1_023249 [Cajanus cajan]             56   8e-07
JAT61837.1 Chloroplastic group IIA intron splicing facilitator C...    56   8e-07
EEF45180.1 conserved hypothetical protein [Ricinus communis]           55   1e-06
XP_009767017.1 PREDICTED: chloroplastic group IIA intron splicin...    55   1e-06
XP_010548668.1 PREDICTED: CRM-domain containing factor CFM3, chl...    55   1e-06
XP_010548667.1 PREDICTED: CRM-domain containing factor CFM3, chl...    55   1e-06
XP_015573524.1 PREDICTED: chloroplastic group IIA intron splicin...    55   1e-06
XP_015573523.1 PREDICTED: chloroplastic group IIA intron splicin...    55   1e-06
XP_015573522.1 PREDICTED: chloroplastic group IIA intron splicin...    55   1e-06

>EAY94887.1 hypothetical protein OsI_16687 [Oryza sativa Indica Group]
          Length = 893

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 27/81 (33%), Positives = 46/81 (56%)
 Frame = -2

Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
           ++V   G   L  + IH  W+  EVV+++        ++    +LEE++GGIV+W+    
Sbjct: 359 MRVGPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTHDILEERTGGIVIWRSGRS 418

Query: 129 IGLYRGLNYNARQLRASNHTT 67
           + LYRG+NYN R +++   TT
Sbjct: 419 VVLYRGMNYNLRCVQSYTQTT 439


>XP_015612635.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Oryza sativa Japonica Group]
           XP_015612636.1 PREDICTED: chloroplastic group IIA intron
           splicing facilitator CRS1, chloroplastic [Oryza sativa
           Japonica Group] BAD23409.1 putative CRS1 [Oryza sativa
           Japonica Group] BAD33710.1 putative CRS1 [Oryza sativa
           Japonica Group] BAF24904.1 Os09g0363100 [Oryza sativa
           Japonica Group] EAZ31373.1 hypothetical protein
           OsJ_15500 [Oryza sativa Japonica Group] BAT07711.1
           Os09g0363100 [Oryza sativa Japonica Group]
          Length = 947

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 27/81 (33%), Positives = 46/81 (56%)
 Frame = -2

Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
           ++V   G   L  + IH  W+  EVV+++        ++    +LEE++GGIV+W+    
Sbjct: 360 MRVGPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTHDILEERTGGIVIWRSGRS 419

Query: 129 IGLYRGLNYNARQLRASNHTT 67
           + LYRG+NYN R +++   TT
Sbjct: 420 VVLYRGMNYNLRCVQSYTQTT 440


>XP_012069764.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Jatropha curcas] KDP40278.1
           hypothetical protein JCGZ_02276 [Jatropha curcas]
          Length = 939

 Score = 58.9 bits (141), Expect = 6e-08
 Identities = 26/83 (31%), Positives = 45/83 (54%)
 Frame = -2

Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
           ++V   G        IH  W+ SE+VRVK+       +R +  +LE K+GG+V+W+    
Sbjct: 227 VRVKGAGVTQEVVDTIHEKWKTSEIVRVKVEGAPALNMRRMHEILERKTGGLVIWRSGTS 286

Query: 129 IGLYRGLNYNARQLRASNHTTRR 61
           + LYRG++Y    ++ S  + +R
Sbjct: 287 VSLYRGVSYEVPSVKLSKRSLKR 309


>XP_003554854.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Glycine max] KRG93410.1
           hypothetical protein GLYMA_19G014100 [Glycine max]
          Length = 1028

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
 Frame = -2

Query: 315 KVIKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMS 136
           K +++ K G  +    +IH  W+ SEVVRV       + +R    +LE K+GG+VVW+  
Sbjct: 166 KKVRLAKAGITEQIVDVIHERWKRSEVVRVFCEELSRDDMRRTHDLLERKTGGLVVWRSG 225

Query: 135 AFIGLYRGLNYN---------ARQLRASNHTTRRVSCQDT-CKVTSREITARN 7
             I LYRG +Y           RQ   SN   + V+  D  C  +   ++ +N
Sbjct: 226 TKIILYRGADYKYPYFLSDKVTRQDNTSNDALQHVNADDKYCDKSESHLSEKN 278


>KRG93411.1 hypothetical protein GLYMA_19G014100 [Glycine max]
          Length = 1034

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
 Frame = -2

Query: 315 KVIKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMS 136
           K +++ K G  +    +IH  W+ SEVVRV       + +R    +LE K+GG+VVW+  
Sbjct: 166 KKVRLAKAGITEQIVDVIHERWKRSEVVRVFCEELSRDDMRRTHDLLERKTGGLVVWRSG 225

Query: 135 AFIGLYRGLNYN---------ARQLRASNHTTRRVSCQDT-CKVTSREITARN 7
             I LYRG +Y           RQ   SN   + V+  D  C  +   ++ +N
Sbjct: 226 TKIILYRGADYKYPYFLSDKVTRQDNTSNDALQHVNADDKYCDKSESHLSEKN 278


>XP_010255197.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic
           [Nelumbo nucifera]
          Length = 1034

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 29/87 (33%), Positives = 46/87 (52%)
 Frame = -2

Query: 315 KVIKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMS 136
           K +KV K G  +     IH  W+ SE+V+++        ++    +LE K+GG+VVW+  
Sbjct: 177 KKLKVGKAGITEGIVNGIHERWRRSELVKIRFEDLCSMNMKRTHDILERKTGGLVVWRSG 236

Query: 135 AFIGLYRGLNYNARQLRASNHTTRRVS 55
           + I LYRG NY     +A+ +T    S
Sbjct: 237 STIILYRGANYEYPYFKANKNTASDTS 263


>XP_010265125.1 PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial [Nelumbo nucifera]
          Length = 838

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 22/69 (31%), Positives = 41/69 (59%)
 Frame = -2

Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
           + +PK G   +  + IH  W+ SE+VR+K        ++  L ++E ++GG+V+W+  + 
Sbjct: 252 VNIPKAGVTQVILEKIHEKWRKSELVRLKFHETLAHDMKTALEIVERRTGGLVIWRSGSI 311

Query: 129 IGLYRGLNY 103
           + +YRG NY
Sbjct: 312 MVVYRGSNY 320


>KDP33843.1 hypothetical protein JCGZ_07414 [Jatropha curcas]
          Length = 874

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 25/70 (35%), Positives = 40/70 (57%)
 Frame = -2

Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
           IKV   G N      IH  W+ SEVV++K  +     ++    +LE ++GG+V+W+  + 
Sbjct: 286 IKVGAAGINQDLVDAIHENWRLSEVVKLKFEWPLSCNMKRTHEILESRTGGLVIWRSGSS 345

Query: 129 IGLYRGLNYN 100
           + LYRG+ YN
Sbjct: 346 VVLYRGMTYN 355


>XP_012077525.1 PREDICTED: uncharacterized protein LOC105638343 [Jatropha curcas]
          Length = 1149

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 25/70 (35%), Positives = 40/70 (57%)
 Frame = -2

Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
           IKV   G N      IH  W+ SEVV++K  +     ++    +LE ++GG+V+W+  + 
Sbjct: 561 IKVGAAGINQDLVDAIHENWRLSEVVKLKFEWPLSCNMKRTHEILESRTGGLVIWRSGSS 620

Query: 129 IGLYRGLNYN 100
           + LYRG+ YN
Sbjct: 621 VVLYRGMTYN 630


>XP_004291748.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 852

 Score = 56.2 bits (134), Expect = 6e-07
 Identities = 25/88 (28%), Positives = 46/88 (52%)
 Frame = -2

Query: 306 KVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAFI 127
           K+   G      +MIH  W+ +E+VR+K+       ++ +  +LE K+GG+VVW+    +
Sbjct: 244 KIGGAGVTQAVVEMIHERWKTAEIVRLKIEGPPALNMKRMHEILERKTGGLVVWRSGTSL 303

Query: 126 GLYRGLNYNARQLRASNHTTRRVSCQDT 43
            LYRG++Y    ++ +    +R     T
Sbjct: 304 SLYRGVSYEVPSVQLNKQIFKRNEISST 331


>OAY55643.1 hypothetical protein MANES_03G169200 [Manihot esculenta]
          Length = 887

 Score = 56.2 bits (134), Expect = 6e-07
 Identities = 24/83 (28%), Positives = 44/83 (53%)
 Frame = -2

Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
           ++V   G        IH  W+ SE+VRVK+       ++ +  +LE K+GG+V+W+    
Sbjct: 237 VRVKGAGVTQEVVDTIHERWKASEIVRVKVEGAPALNMKRMHEILERKTGGLVIWRSGTS 296

Query: 129 IGLYRGLNYNARQLRASNHTTRR 61
           + LYRG++Y    ++ +    +R
Sbjct: 297 VSLYRGVSYEVPSVQVNQRIVKR 319


>KYP60835.1 hypothetical protein KK1_023249 [Cajanus cajan]
          Length = 840

 Score = 55.8 bits (133), Expect = 8e-07
 Identities = 25/93 (26%), Positives = 51/93 (54%)
 Frame = -2

Query: 306 KVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAFI 127
           ++ + G        IH  W+ SE+VR+K   +    ++ +  +LE K+GG+V+W+    +
Sbjct: 233 RIGRSGVTQAVVDKIHERWKTSEIVRLKFEGEAALNMKRMHEILERKTGGLVIWRSGNSV 292

Query: 126 GLYRGLNYNARQLRASNHTTRRVSCQDTCKVTS 28
            LYRG++Y+   ++ +    R+   ++T K+ S
Sbjct: 293 SLYRGVSYDVPSVKQNKQIYRK--SENTSKILS 323


>JAT61837.1 Chloroplastic group IIA intron splicing facilitator CRS1,
           chloroplastic, partial [Anthurium amnicola]
          Length = 931

 Score = 55.8 bits (133), Expect = 8e-07
 Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
 Frame = -2

Query: 306 KVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAFI 127
           K+   G       MIH  W+  EVVR+K        ++ +  +LE K+GG+V+W+  + I
Sbjct: 288 KIGGAGVTREIVDMIHEKWKTEEVVRLKCEGPPALNMKRMHEILERKTGGLVIWRSGSSI 347

Query: 126 GLYRGLNYNARQ----LRASNHTTRRVS 55
            LYRGL +   Q       S H TR VS
Sbjct: 348 SLYRGLGFELAQPEKSRNQSTHITRVVS 375


>EEF45180.1 conserved hypothetical protein [Ricinus communis]
          Length = 773

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 25/83 (30%), Positives = 44/83 (53%)
 Frame = -2

Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
           ++V   G        IH  W+ SE+VRVK+       +R +  +LE K+GG+V+W+    
Sbjct: 124 VRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEGAPALNMRRMHEILERKTGGLVIWRSGTS 183

Query: 129 IGLYRGLNYNARQLRASNHTTRR 61
           + LYRG++Y    ++ +    +R
Sbjct: 184 VSLYRGVSYEDPSVQLNKQILKR 206


>XP_009767017.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Nicotiana sylvestris]
           XP_009767027.1 PREDICTED: chloroplastic group IIA intron
           splicing facilitator CRS1, chloroplastic [Nicotiana
           sylvestris] XP_016479052.1 PREDICTED: CRM-domain
           containing factor CFM3, chloroplastic/mitochondrial-like
           [Nicotiana tabacum] XP_016479053.1 PREDICTED: CRM-domain
           containing factor CFM3, chloroplastic/mitochondrial-like
           [Nicotiana tabacum]
          Length = 831

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 24/76 (31%), Positives = 42/76 (55%)
 Frame = -2

Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
           + VPK G      + IH  W+ +E+VR+K        +R    ++E ++GG+V+W+  + 
Sbjct: 244 VSVPKAGITGAVLEKIHDAWRKNELVRLKFHEVLAHDMRTGHEIVERRTGGLVIWRAGSV 303

Query: 129 IGLYRGLNYNARQLRA 82
           + +YRG NY    LR+
Sbjct: 304 MVVYRGSNYEGPSLRS 319


>XP_010548668.1 PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial isoform X2 [Tarenaya
           hassleriana]
          Length = 848

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
 Frame = -2

Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
           IKV   G      ++IH  W+  EVV++K        ++     LE+K+GG+V+W+  + 
Sbjct: 271 IKVGSAGVTQALVEVIHEKWKVDEVVKLKFREPLSLNMKRTHETLEKKTGGLVIWRSGSS 330

Query: 129 IGLYRGLNYN---ARQLRASNHTTRRVS 55
           + LYRG+NY     +     N   RR+S
Sbjct: 331 VVLYRGMNYKLPCVQSFIKQNFPDRRIS 358


>XP_010548667.1 PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial isoform X1 [Tarenaya
           hassleriana]
          Length = 853

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
 Frame = -2

Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
           IKV   G      ++IH  W+  EVV++K        ++     LE+K+GG+V+W+  + 
Sbjct: 271 IKVGSAGVTQALVEVIHEKWKVDEVVKLKFREPLSLNMKRTHETLEKKTGGLVIWRSGSS 330

Query: 129 IGLYRGLNYN---ARQLRASNHTTRRVS 55
           + LYRG+NY     +     N   RR+S
Sbjct: 331 VVLYRGMNYKLPCVQSFIKQNFPDRRIS 358


>XP_015573524.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X5 [Ricinus communis]
          Length = 857

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 25/83 (30%), Positives = 44/83 (53%)
 Frame = -2

Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
           ++V   G        IH  W+ SE+VRVK+       +R +  +LE K+GG+V+W+    
Sbjct: 228 VRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEGAPALNMRRMHEILERKTGGLVIWRSGTS 287

Query: 129 IGLYRGLNYNARQLRASNHTTRR 61
           + LYRG++Y    ++ +    +R
Sbjct: 288 VSLYRGVSYEDPSVQLNKQILKR 310


>XP_015573523.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X4 [Ricinus communis]
          Length = 886

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 25/83 (30%), Positives = 44/83 (53%)
 Frame = -2

Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
           ++V   G        IH  W+ SE+VRVK+       +R +  +LE K+GG+V+W+    
Sbjct: 228 VRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEGAPALNMRRMHEILERKTGGLVIWRSGTS 287

Query: 129 IGLYRGLNYNARQLRASNHTTRR 61
           + LYRG++Y    ++ +    +R
Sbjct: 288 VSLYRGVSYEDPSVQLNKQILKR 310


>XP_015573522.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X3 [Ricinus communis]
          Length = 898

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 25/83 (30%), Positives = 44/83 (53%)
 Frame = -2

Query: 309 IKVPKCGFNDLFFKMIHAGWQYSEVVRVKMPFKKDEKLRPLLSVLEEKSGGIVVWKMSAF 130
           ++V   G        IH  W+ SE+VRVK+       +R +  +LE K+GG+V+W+    
Sbjct: 228 VRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEGAPALNMRRMHEILERKTGGLVIWRSGTS 287

Query: 129 IGLYRGLNYNARQLRASNHTTRR 61
           + LYRG++Y    ++ +    +R
Sbjct: 288 VSLYRGVSYEDPSVQLNKQILKR 310


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