BLASTX nr result

ID: Ephedra29_contig00018980 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00018980
         (231 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010257914.1 PREDICTED: transcription factor BIM2 isoform X3 [...    55   3e-07
XP_011623243.1 PREDICTED: transcription factor BIM2 [Amborella t...    53   2e-06

>XP_010257914.1 PREDICTED: transcription factor BIM2 isoform X3 [Nelumbo nucifera]
          Length = 558

 Score = 55.5 bits (132), Expect = 3e-07
 Identities = 29/52 (55%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
 Frame = +3

Query: 42  PPQHPF--QGSKTPHDFLSLYAEPNSNHSDSRSNPGNSMHLTTHDFLQPLER 191
           P   PF  +G KT HDFLSLY  P+  H D R  P   + L THDFLQPLER
Sbjct: 4   PQPRPFGTEGKKTTHDFLSLYGHPSFQHQDPRP-PHGFLILKTHDFLQPLER 54


>XP_011623243.1 PREDICTED: transcription factor BIM2 [Amborella trichopoda]
          Length = 586

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
 Frame = +3

Query: 30  MDLNPPQHPF--QGSKTPHDFLSLYAEPNSNHSDSRSNPGNSMHLTTHDFLQPLER 191
           M+L  PQ PF  +G+K  HDFLSLY E +  +++  ++ G S +L T DFLQPLE+
Sbjct: 1   MELPQPQLPFTTEGAKPTHDFLSLYNEASFQNTEPGASQGFSSYLKTQDFLQPLEK 56


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