BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00018922
         (266 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004149000.1 PREDICTED: pentatricopeptide repeat-containing pr...    64   8e-10
XP_008451905.1 PREDICTED: pentatricopeptide repeat-containing pr...    63   1e-09
XP_016901180.1 PREDICTED: pentatricopeptide repeat-containing pr...    63   1e-09
XP_006850872.1 PREDICTED: pentatricopeptide repeat-containing pr...    61   5e-09
XP_007161634.1 hypothetical protein PHAVU_001G085800g [Phaseolus...    60   1e-08
CDP20623.1 unnamed protein product [Coffea canephora]                  60   2e-08
XP_016680241.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   2e-08
XP_017626135.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   3e-08
XP_003540687.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   4e-08
GAU19164.1 hypothetical protein TSUD_89290 [Trifolium subterraneum]    58   6e-08
XP_012476627.1 PREDICTED: pentatricopeptide repeat-containing pr...    58   6e-08
XP_017617035.1 PREDICTED: pentatricopeptide repeat-containing pr...    58   6e-08
KJB26478.1 hypothetical protein B456_004G243800 [Gossypium raimo...    58   6e-08
KHN25331.1 Pentatricopeptide repeat-containing protein, mitochon...    57   1e-07
BAT84729.1 hypothetical protein VIGAN_04217100 [Vigna angularis ...    55   1e-07
XP_015952086.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   2e-07
XP_006293706.1 hypothetical protein CARUB_v10022664mg [Capsella ...    57   2e-07
KHN06169.1 Pentatricopeptide repeat-containing protein, mitochon...    57   2e-07
CDX80215.1 BnaC09g35270D [Brassica napus]                              57   2e-07
XP_016675368.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   2e-07

>XP_004149000.1 PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Cucumis sativus] XP_011653231.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic [Cucumis sativus]
           XP_011653232.1 PREDICTED: pentatricopeptide
           repeat-containing protein At4g19440, chloroplastic
           [Cucumis sativus] XP_011653233.1 PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Cucumis sativus] XP_011653234.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic [Cucumis sativus]
          Length = 822

 Score = 63.5 bits (153), Expect = 8e-10
 Identities = 26/64 (40%), Positives = 43/64 (67%)
 Frame = -1

Query: 197 YKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQLLTEGYRKRADLQGAIKICDKVK 18
           Y ++I+ YC+ G + KA  +L KM+E GI+PDV  + +LT G+ K  D+  A K+CD++ 
Sbjct: 736 YTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMA 795

Query: 17  EQGI 6
            +G+
Sbjct: 796 TEGL 799


>XP_008451905.1 PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic isoform X2 [Cucumis melo]
          Length = 669

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 26/64 (40%), Positives = 43/64 (67%)
 Frame = -1

Query: 197 YKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQLLTEGYRKRADLQGAIKICDKVK 18
           Y ++I+ YC+ G + KA  +L KM+E GI+PDV  + +LT G+ K  D+  A K+CD++ 
Sbjct: 583 YTVMIDGYCKLGNMEKAYNLLTKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMA 642

Query: 17  EQGI 6
            +G+
Sbjct: 643 TEGL 646


>XP_016901180.1 PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic isoform X1 [Cucumis melo] XP_016901181.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic isoform X1 [Cucumis melo]
           XP_016901182.1 PREDICTED: pentatricopeptide
           repeat-containing protein At4g19440, chloroplastic
           isoform X1 [Cucumis melo] XP_016901183.1 PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic isoform X1 [Cucumis melo]
          Length = 822

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 26/64 (40%), Positives = 43/64 (67%)
 Frame = -1

Query: 197 YKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQLLTEGYRKRADLQGAIKICDKVK 18
           Y ++I+ YC+ G + KA  +L KM+E GI+PDV  + +LT G+ K  D+  A K+CD++ 
Sbjct: 736 YTVMIDGYCKLGNMEKAYNLLTKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMA 795

Query: 17  EQGI 6
            +G+
Sbjct: 796 TEGL 799


>XP_006850872.1 PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Amborella trichopoda] ERN12453.1
           hypothetical protein AMTR_s00025p00148960 [Amborella
           trichopoda]
          Length = 839

 Score = 61.2 bits (147), Expect = 5e-09
 Identities = 26/65 (40%), Positives = 45/65 (69%)
 Frame = -1

Query: 197 YKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQLLTEGYRKRADLQGAIKICDKVK 18
           Y ++I+ YC+ G L +A +VLD+M E+G+ PD+  +  L  G+ K  ++ GA KICD++ 
Sbjct: 726 YTVMIDGYCKVGLLREALKVLDEMMEKGVAPDLVTYNALIYGFCKEGNMDGAFKICDQMS 785

Query: 17  EQGIV 3
           ++G+V
Sbjct: 786 QRGLV 790


>XP_007161634.1 hypothetical protein PHAVU_001G085800g [Phaseolus vulgaris]
           ESW33628.1 hypothetical protein PHAVU_001G085800g
           [Phaseolus vulgaris]
          Length = 618

 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -1

Query: 266 GSLMNVLEFHEIIDERE-LCDFLYYKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAF 90
           G++    +  E +D  + L D + Y  +++ YCREG++ +A Q+LDKM+  GI PD  ++
Sbjct: 470 GNIDRAFQLLEQMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDKMKRRGIKPDHISY 529

Query: 89  QLLTEGYRKRADLQGAIKICDKVKEQG 9
             L  GY KR D++ A ++ D++   G
Sbjct: 530 NTLISGYSKRGDMKDAFRVRDEMMTTG 556


>CDP20623.1 unnamed protein product [Coffea canephora]
          Length = 867

 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
 Frame = -1

Query: 245  EFHEIIDERELCDF----LYYKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQLLT 78
            E  +++ E  LCD     + Y +VI+ YCR G + +A  +L +M + GIIPD   + +LT
Sbjct: 760  EARKLLQEMSLCDIHPNEITYTVVIDGYCRSGNMKEATHLLAEMVKNGIIPDSVTYSILT 819

Query: 77   EGYRKRADLQGAIKICDKVKEQG 9
             G  K   ++ A K+CD + + G
Sbjct: 820  NGICKEGKIEEAFKLCDNMLQTG 842


>XP_016680241.1 PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Gossypium hirsutum]
          Length = 589

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 23/78 (29%), Positives = 49/78 (62%)
 Frame = -1

Query: 239 HEIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQLLTEGYRKR 60
           +E++D    CD + Y ++I+ +C+EG + KA  ++D M ++GI P++  + +  + Y K 
Sbjct: 209 NEMVDNNISCDIVTYNILIDAHCKEGMIYKAVDIVDTMVKQGIEPNIVTYNIFIDAYCKE 268

Query: 59  ADLQGAIKICDKVKEQGI 6
             +  A++  D++++QGI
Sbjct: 269 GMVSKAVETIDRMRKQGI 286


>XP_017626135.1 PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Gossypium arboreum]
          Length = 532

 Score = 58.9 bits (141), Expect = 3e-08
 Identities = 24/78 (30%), Positives = 48/78 (61%)
 Frame = -1

Query: 239 HEIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQLLTEGYRKR 60
           +E++D    CD + Y ++I+ +C+EG + KA  ++D M ++GI P++  + +  + Y K 
Sbjct: 152 NEMVDNNISCDIVTYNILIDAHCKEGMIYKAVDIVDTMGKQGIEPNIVTYNIFIDAYCKE 211

Query: 59  ADLQGAIKICDKVKEQGI 6
             +  AI+  D +++QGI
Sbjct: 212 GMVSKAIETIDTMRKQGI 229


>XP_003540687.1 PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial [Glycine max] KRH24548.1 hypothetical
           protein GLYMA_12G048300 [Glycine max]
          Length = 623

 Score = 58.5 bits (140), Expect = 4e-08
 Identities = 27/76 (35%), Positives = 48/76 (63%)
 Frame = -1

Query: 236 EIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQLLTEGYRKRA 57
           E+ + + L D + Y  +++ YCREG++ +A Q+LD+M+  GI PD  ++  L  GY KR 
Sbjct: 486 EMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRG 545

Query: 56  DLQGAIKICDKVKEQG 9
           D++ A ++ D++   G
Sbjct: 546 DMKDAFRVRDEMMTTG 561


>GAU19164.1 hypothetical protein TSUD_89290 [Trifolium subterraneum]
          Length = 370

 Score = 58.2 bits (139), Expect = 6e-08
 Identities = 27/77 (35%), Positives = 49/77 (63%)
 Frame = -1

Query: 239 HEIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQLLTEGYRKR 60
           +E+ + + L D + Y  +++ YCREG++ +A  +LD+M+  GI PD  ++  L  GY KR
Sbjct: 231 NEMDNAKILPDEITYNTLMQGYCREGKVEEAQTLLDEMKRRGIKPDHISYNTLISGYSKR 290

Query: 59  ADLQGAIKICDKVKEQG 9
            D++ A+K+ D++   G
Sbjct: 291 GDIKDALKVYDEMLSIG 307


>XP_012476627.1 PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Gossypium raimondii]
          Length = 589

 Score = 58.2 bits (139), Expect = 6e-08
 Identities = 23/78 (29%), Positives = 48/78 (61%)
 Frame = -1

Query: 239 HEIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQLLTEGYRKR 60
           +E++D    CD + Y ++I+ +C+EG + KA  ++D M ++GI P++  + +  + Y K 
Sbjct: 209 NEMVDNNISCDIVTYNILIDAHCKEGMIYKAVDIVDTMVKQGIEPNIVTYNIFIDAYCKE 268

Query: 59  ADLQGAIKICDKVKEQGI 6
             +  A++  D +++QGI
Sbjct: 269 GMVSKAVETIDTMRKQGI 286


>XP_017617035.1 PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Gossypium arboreum]
          Length = 623

 Score = 58.2 bits (139), Expect = 6e-08
 Identities = 26/78 (33%), Positives = 48/78 (61%)
 Frame = -1

Query: 239 HEIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQLLTEGYRKR 60
           +E++D    CD + Y ++I+ +C+EG +++A ++LD MR+ GI P++  + +  + Y K 
Sbjct: 277 NEMVDNNISCDIVTYNVLIDAHCKEGMILEAIEILDTMRKHGIEPNLITYNICIDAYCKE 336

Query: 59  ADLQGAIKICDKVKEQGI 6
             L  A  I D + +QGI
Sbjct: 337 GMLAEAKDIVDTMIKQGI 354


>KJB26478.1 hypothetical protein B456_004G243800 [Gossypium raimondii]
          Length = 647

 Score = 58.2 bits (139), Expect = 6e-08
 Identities = 23/78 (29%), Positives = 48/78 (61%)
 Frame = -1

Query: 239 HEIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQLLTEGYRKR 60
           +E++D    CD + Y ++I+ +C+EG + KA  ++D M ++GI P++  + +  + Y K 
Sbjct: 267 NEMVDNNISCDIVTYNILIDAHCKEGMIYKAVDIVDTMVKQGIEPNIVTYNIFIDAYCKE 326

Query: 59  ADLQGAIKICDKVKEQGI 6
             +  A++  D +++QGI
Sbjct: 327 GMVSKAVETIDTMRKQGI 344


>KHN25331.1 Pentatricopeptide repeat-containing protein, mitochondrial [Glycine
           soja]
          Length = 437

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 26/76 (34%), Positives = 48/76 (63%)
 Frame = -1

Query: 236 EIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQLLTEGYRKRA 57
           E+ + + L D + Y  +++ YCR+G++ +A Q+LD+M+  GI PD  ++  L  GY KR 
Sbjct: 300 EMDNMKVLPDEITYNTLMQGYCRDGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRG 359

Query: 56  DLQGAIKICDKVKEQG 9
           D++ A ++ D++   G
Sbjct: 360 DMKDAFRVRDEMMTTG 375


>BAT84729.1 hypothetical protein VIGAN_04217100 [Vigna angularis var.
           angularis]
          Length = 147

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 25/82 (30%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = -1

Query: 251 VLEFHEIIDERELC-DFLYYKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQLLTE 75
           ++ F++ +D  ++  D + Y  +++ YCREG++ +A ++LD+M+  GI PD  ++  +  
Sbjct: 4   LIRFNKKMDNMKVHPDEITYNTLMQGYCREGKVEEARKLLDEMKRRGIKPDHISYNTIIS 63

Query: 74  GYRKRADLQGAIKICDKVKEQG 9
           GY KR D++ A ++ D++   G
Sbjct: 64  GYSKRGDMKDAFRVRDEMMTTG 85


>XP_015952086.1 PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial [Arachis duranensis]
          Length = 628

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 27/86 (31%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
 Frame = -1

Query: 254 NVLEFHEIIDE----RELCDFLYYKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQ 87
           N++   E++ E    + L D + Y  +++ YCREG++ +A ++LD+M+ +GI PD  ++ 
Sbjct: 481 NIIRAFELLKEMNRMKVLPDEVTYNTLMQGYCREGKVEEARKLLDEMKRKGIKPDHISYN 540

Query: 86  LLTEGYRKRADLQGAIKICDKVKEQG 9
            L  GY K+ D++ A ++ D++   G
Sbjct: 541 TLISGYSKKGDMKDAFRVRDEMLTTG 566


>XP_006293706.1 hypothetical protein CARUB_v10022664mg [Capsella rubella]
           EOA26604.1 hypothetical protein CARUB_v10022664mg
           [Capsella rubella]
          Length = 794

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 25/79 (31%), Positives = 48/79 (60%)
 Frame = -1

Query: 242 FHEIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQLLTEGYRK 63
           F E++D+  + D + Y  +I  YC EG+++ A  ++D+MR  GI PD+  + +L  G  +
Sbjct: 405 FREMMDKGMVPDVINYTTLINGYCLEGKVVDALDLIDEMRGNGISPDLITYNVLVSGLAR 464

Query: 62  RADLQGAIKICDKVKEQGI 6
               + A++I D++K +G+
Sbjct: 465 NGHEEEALEIYDRMKAEGL 483


>KHN06169.1 Pentatricopeptide repeat-containing protein, mitochondrial [Glycine
           soja]
          Length = 379

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 26/75 (34%), Positives = 46/75 (61%)
 Frame = -1

Query: 233 IIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQLLTEGYRKRAD 54
           I+  R + D + Y  +++ YCREG++ +A  +LD+M+  GI PD+ ++  L  GY KR D
Sbjct: 243 IMINRVIPDEITYNTLLQGYCREGKVEEARLLLDEMKRRGIKPDLISYNTLISGYSKRGD 302

Query: 53  LQGAIKICDKVKEQG 9
           ++ A  + D++   G
Sbjct: 303 MKDAFGVRDEMMTTG 317


>CDX80215.1 BnaC09g35270D [Brassica napus]
          Length = 503

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 25/87 (28%), Positives = 52/87 (59%)
 Frame = -1

Query: 266 GSLMNVLEFHEIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQ 87
           G +   LE H+ I +  L +   Y M+I  +CR+GR+ +A ++L KM  +G+ PD   + 
Sbjct: 363 GDMKRALELHDAILKGLLANTATYNMLIRGFCRQGRMDEASELLTKMTGDGVSPDCITYT 422

Query: 86  LLTEGYRKRADLQGAIKICDKVKEQGI 6
            +   + +++D++ AI++ + + E+G+
Sbjct: 423 TMIYEFCRKSDVKKAIELWNSMMERGV 449


>XP_016675368.1 PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Gossypium hirsutum]
          Length = 627

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 26/78 (33%), Positives = 47/78 (60%)
 Frame = -1

Query: 239 HEIIDERELCDFLYYKMVIERYCREGRLIKAGQVLDKMREEGIIPDVDAFQLLTEGYRKR 60
           +E++D    CD + Y ++I+ +C+EG + +A ++LD MR+ GI P++  + +  + Y K 
Sbjct: 263 NEMVDNNISCDIVTYNVLIDAHCKEGMISEAIEILDTMRKHGIEPNLITYNICIDAYCKE 322

Query: 59  ADLQGAIKICDKVKEQGI 6
             L  A  I D + +QGI
Sbjct: 323 GMLAEAKDIVDTMIKQGI 340