BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00018822
         (1546 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJA90769.1 DNA-directed RNA polymerase V largest subunit [Ephedr...   927   0.0  
AJA90760.1 DNA-directed RNA polymerase V largest subunit [Cycas ...   255   2e-70
AJP06335.1 NRPD1b [Pinus tabuliformis]                                238   2e-64
AJA90784.1 DNA-directed RNA polymerase V largest subunit [Pinus ...   238   2e-64
AJA90776.1 DNA-directed RNA polymerase V largest subunit [Ginkgo...   219   3e-58
XP_002265533.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   173   2e-42
CBI40152.3 unnamed protein product, partial [Vitis vinifera]          173   2e-42
AIO05699.1 DNA-directed RNA polymerase V subunit 1, partial [Coc...   172   2e-42
XP_008812396.2 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ...   171   5e-42
XP_010932322.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   171   5e-42
ONK65887.1 uncharacterized protein A4U43_C06F2000 [Asparagus off...   170   2e-41
EPS67715.1 hypothetical protein M569_07058, partial [Genlisea au...   160   2e-38
GAV75269.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1...   160   2e-38
KMZ58649.1 DNA-directed RNA polymerase [Zostera marina]               160   2e-38
XP_010246063.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   160   3e-38
XP_011655250.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   160   3e-38
XP_008465860.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   160   3e-38
XP_011089162.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   159   1e-37
XP_002303926.2 hypothetical protein POPTR_0003s19630g [Populus t...   158   1e-37
OAY53390.1 hypothetical protein MANES_04G159600 [Manihot esculenta]   157   3e-37

>AJA90769.1 DNA-directed RNA polymerase V largest subunit [Ephedra trifurca]
          Length = 2093

 Score =  927 bits (2397), Expect = 0.0
 Identities = 469/515 (91%), Positives = 470/515 (91%)
 Frame = +1

Query: 1    STSTERSPDTGVDEKDRVAFDYPLASIAGIQFSISSSKEINKASVHAGDGVISTMQLSSP 180
            STSTERSP+TGVDEKDRVAFDYPLASIAGIQFSISSSKEINKASVHAGDGVISTMQLSSP
Sbjct: 5    STSTERSPNTGVDEKDRVAFDYPLASIAGIQFSISSSKEINKASVHAGDGVISTMQLSSP 64

Query: 181  LLGIPNKTGKCEQCGTDKLNECDGHFGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKS 360
            LLGIPNKTGKCEQCGTDKLNECDGHFGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKS
Sbjct: 65   LLGIPNKTGKCEQCGTDKLNECDGHFGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKS 124

Query: 361  KKNNISAEQLRDYVKAGVNENGLVTLTGMKLKEESDDFASSVDGVGVLSKNDCFMKDFKN 540
            KKNNISAEQLRDYVKAGVNENGLVTLTGMKLKEE DDFASSVDGVGVLSKNDCFMKDFKN
Sbjct: 125  KKNNISAEQLRDYVKAGVNENGLVTLTGMKLKEEPDDFASSVDGVGVLSKNDCFMKDFKN 184

Query: 541  VTLLDEATXXXXXXXXXXXXXXXLRKDHSKGESSTNSKFSKGKATAFASDDHHMGSYKST 720
            VTLLDEAT               LRKDHSKGESSTNSKFSKGKAT FASDDH MGSYKST
Sbjct: 185  VTLLDEATSSSADKANFSSSKKKLRKDHSKGESSTNSKFSKGKATTFASDDHQMGSYKST 244

Query: 721  PSXXXXXXXXXXXXXRDYPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXX 900
            PS             RDYPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEH    
Sbjct: 245  PSKKKGCKYCMDKKDRDYPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHGGYK 304

Query: 901  XXXXXXXRVLLPYEASKILKKIPEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDAL 1080
                   RVLLPYEASKILKKIPEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDAL
Sbjct: 305  SGSSSKSRVLLPYEASKILKKIPEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDAL 364

Query: 1081 GSTVKISDYGVQMLKKIVSSVQDKQSTMGKNKFSVHREATKELQSLFTQYLKVMGAPKVS 1260
            GSTVKISDYGVQMLKKIVS VQDKQ TMGKNKFSVHREATKELQSLFTQYLKVMGAPKVS
Sbjct: 365  GSTVKISDYGVQMLKKIVSCVQDKQLTMGKNKFSVHREATKELQSLFTQYLKVMGAPKVS 424

Query: 1261 TTFNPGSNAQGSDEFSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLE 1440
            TTFNPGSNAQGSDEFSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLE
Sbjct: 425  TTFNPGSNAQGSDEFSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLE 484

Query: 1441 IAKRVTVEEWVTVFNKEKIRKMVEEGKCHTLSRKD 1545
            IAKRVTVEEWVTVFNKEKIRKMVE GKCHTLSRKD
Sbjct: 485  IAKRVTVEEWVTVFNKEKIRKMVEGGKCHTLSRKD 519


>AJA90760.1 DNA-directed RNA polymerase V largest subunit [Cycas revoluta]
          Length = 2465

 Score =  255 bits (651), Expect = 2e-70
 Identities = 165/511 (32%), Positives = 257/511 (50%), Gaps = 22/511 (4%)
 Frame = +1

Query: 67   PLASIAGIQFSISSSKEINKASVHAGDGVISTMQLSSPLLGIPNKTGKCEQCGTDKLNEC 246
            PL  I  +QFS+++++EI K S    + +  + QLS P LG+P ++ +C  CGT K +EC
Sbjct: 14   PLGRITSLQFSLATTEEIVKIS--GSEAIRQSSQLSGPSLGLPTESNRCTSCGTVKFDEC 71

Query: 247  DGHFGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSKKNNISAEQLRDYVKAGVNE-- 420
            +GHFGHI+LP P+YHPSH++ V  I +++CLNCL++K KK     E++    K  + E  
Sbjct: 72   EGHFGHIRLPTPVYHPSHVQEVVRIFKRICLNCLKLKKKKRINFVEEILQENKPIIQEVD 131

Query: 421  -NGLVTLTGMKLKEESDDFASSVDGV----GVLSKNDCFMKDF--------KNVTLLDEA 561
             NG  ++     K +     S  D V      +S+ D  ++          +N     + 
Sbjct: 132  SNGKKSIISTNSKRKDICNKSGRDAVVTDASSISEEDPLLRSLIPIRTYRRRNAINKQQH 191

Query: 562  TXXXXXXXXXXXXXXXLRKDHSKGESSTNSKFSKGKATAFASDDHHMGSYKSTPSXXXXX 741
                             RK H K  +    +       AFAS       Y          
Sbjct: 192  DSQASKNFKAVKEVVRERKQHKKQGAVLGKR-------AFASSIEDT-DYNKDEGTCKYC 243

Query: 742  XXXXXXXXRDYPPFKIQI--SGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXX 915
                    + YP   +++  +  +      E+K++S+  +   +W FL  +         
Sbjct: 244  KVADKKSAKSYPAVDVKVVFAQSSNGGKIKEIKISSRKEVPHKFWDFLDRYSGHRSGNEL 303

Query: 916  XXRVLLPYEASKILKKIPEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDALGSTVK 1095
              R LLP+EA  IL++IPE   +K       ++P+ LI +C+PVPPNC RI    G +VK
Sbjct: 304  S-RTLLPFEALNILRQIPESTSRKF-----GIRPEALIWECLPVPPNCTRIS---GESVK 354

Query: 1096 ISDYGV----QMLKKIVSSV-QDKQSTMGKNKFSVHREATKELQSLFTQYLKVMGAPKVS 1260
             +  G+    Q+LKKI+++V + + S  GK  F   +   K LQSL T+YL+  G PKV+
Sbjct: 355  TTRIGIDGAGQILKKIMNTVGRIRDSRGGKPTFDTKKHEAKVLQSLSTEYLRARGGPKVA 414

Query: 1261 TTFNPGSNAQGSDEFSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLE 1440
                P      +   ++S +  W  ++++LF+ K  G S+R VVTGD Y  I EIG+PLE
Sbjct: 415  GDKEPSGICDRNIGNAESISKVWGKRIQTLFLKKISGFSARSVVTGDAYIDIDEIGVPLE 474

Query: 1441 IAKRVTVEEWVTVFNKEKIRKMVEEGKCHTL 1533
            IAK VT+EE VTV+NK++++ +V +G   TL
Sbjct: 475  IAKGVTIEERVTVYNKKQLQNIVNKGFYTTL 505


>AJP06335.1 NRPD1b [Pinus tabuliformis]
          Length = 2530

 Score =  238 bits (606), Expect = 2e-64
 Identities = 126/254 (49%), Positives = 165/254 (64%), Gaps = 1/254 (0%)
 Frame = +1

Query: 772  YPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASK 951
            YP   +++  K E    LEL+ +SK  +  D+W+FL  +           R LLP+EA K
Sbjct: 345  YPTITVKVVCKPEGIKTLELEASSKKGVPSDFWSFLERYGYQSTNSSS--RSLLPFEALK 402

Query: 952  ILKKIPEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDALGSTVKISDYGVQMLKKI 1131
            IL++IP K +KK+ V    ++P  LILDC+PVPPNC+RIPD  G  +  SD     LKKI
Sbjct: 403  ILEQIPRKTLKKLGVETSVIQPGALILDCLPVPPNCVRIPDMWGIPLMTSDRATHTLKKI 462

Query: 1132 VSSVQD-KQSTMGKNKFSVHREATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSDEFS 1308
            VS V++ K+S  G  KF  H    K+LQSLFT+YL V    K+  +  P +N  G+ +  
Sbjct: 463  VSVVEEIKESRSGTAKFMSHEAEAKDLQSLFTEYLCVRAGRKIPGSKLPTTNFPGNAKSK 522

Query: 1309 KSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNK 1488
            K  +N WLDK+RS FISKSC LSSRCVVTGD YRGI EIGIPLEIAKRVT  E V V+N+
Sbjct: 523  KLDSNMWLDKIRSFFISKSCDLSSRCVVTGDAYRGINEIGIPLEIAKRVTFVERVNVYNR 582

Query: 1489 EKIRKMVEEGKCHT 1530
            EK++K+V++G+C T
Sbjct: 583  EKLQKIVDKGQCRT 596



 Score =  132 bits (331), Expect = 1e-28
 Identities = 69/160 (43%), Positives = 102/160 (63%), Gaps = 5/160 (3%)
 Frame = +1

Query: 64  YPLASIAGIQFSISSSKEINKASVHAGDGVISTMQLSSPLLGIPNKTGKCEQCGTDKLNE 243
           +P A++ GIQF ++SS+EI+K SV+    + ++ QL +  LG+P K+GKCE CGT+K +E
Sbjct: 7   FPQATLTGIQFGLASSREISKVSVYGMSSIQNSTQLVNARLGLPVKSGKCETCGTEKPDE 66

Query: 244 CDGHFGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSKKNNISA-----EQLRDYVKA 408
           CDGHFGHI+LP PIYHPSH++ ++ IL K+CLNC  +K KK +  A     E   + V  
Sbjct: 67  CDGHFGHIRLPTPIYHPSHVEELRRILSKICLNCFRLKGKKEHQDAGNPVLEVECNGVTF 126

Query: 409 GVNENGLVTLTGMKLKEESDDFASSVDGVGVLSKNDCFMK 528
            + ++  V+   +K  E+S +F S    +G   KN  F K
Sbjct: 127 KIPKDSRVS-KNLKAAEDSCNFVSPQSSLG--GKNKDFQK 163


>AJA90784.1 DNA-directed RNA polymerase V largest subunit [Pinus canariensis]
          Length = 2705

 Score =  238 bits (606), Expect = 2e-64
 Identities = 126/254 (49%), Positives = 165/254 (64%), Gaps = 1/254 (0%)
 Frame = +1

Query: 772  YPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASK 951
            YP   +++  K E    LEL+ +SK  +  D+W+FL  +           R LLP+EA K
Sbjct: 345  YPTITVKVVCKPEGIKTLELEASSKKGVPSDFWSFLERYGYQSTNSSS--RSLLPFEALK 402

Query: 952  ILKKIPEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDALGSTVKISDYGVQMLKKI 1131
            IL++IP K +KK+ V    ++P  LILDC+PVPPNC+RIPD  G  +  SD     LKKI
Sbjct: 403  ILEQIPRKTLKKLGVETSVIQPGALILDCLPVPPNCVRIPDMWGIPLMTSDRATHTLKKI 462

Query: 1132 VSSVQD-KQSTMGKNKFSVHREATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSDEFS 1308
            VS V++ K+S  G  KF  H    K+LQSLFT+YL V    K+  +  P +N  G+ +  
Sbjct: 463  VSVVEEIKESRSGTAKFMSHEAEAKDLQSLFTEYLCVRAGRKIPGSKLPTTNFPGNAKSK 522

Query: 1309 KSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNK 1488
            K  +N WLDK+RS FISKSC LSSRCVVTGD YRGI EIGIPLEIAKRVT  E V V+N+
Sbjct: 523  KLDSNMWLDKIRSFFISKSCDLSSRCVVTGDAYRGINEIGIPLEIAKRVTFVERVNVYNR 582

Query: 1489 EKIRKMVEEGKCHT 1530
            EK++K+V++G+C T
Sbjct: 583  EKLQKIVDKGQCRT 596



 Score =  130 bits (327), Expect = 3e-28
 Identities = 69/160 (43%), Positives = 100/160 (62%), Gaps = 5/160 (3%)
 Frame = +1

Query: 64  YPLASIAGIQFSISSSKEINKASVHAGDGVISTMQLSSPLLGIPNKTGKCEQCGTDKLNE 243
           +P A++ GIQF ++SS+EI+K SV+    +  + QL +  LG+P K+GKCE CGT+K +E
Sbjct: 7   FPQATLTGIQFGLASSREISKVSVYGMSSIQHSTQLVNARLGLPVKSGKCETCGTEKPDE 66

Query: 244 CDGHFGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSKKNNISA-----EQLRDYVKA 408
           CDGHFGHI+LP PIYHPSH++ ++ IL K+CLNC  +K KK +  A     E   + V  
Sbjct: 67  CDGHFGHIRLPTPIYHPSHVEELRRILSKICLNCFRLKGKKEHQDAGNPVLEVECNGVTF 126

Query: 409 GVNENGLVTLTGMKLKEESDDFASSVDGVGVLSKNDCFMK 528
            + ++  V+   +K  E+S +F S     G   KN  F K
Sbjct: 127 KIPKDSRVS-KNLKAAEDSCNFVSPQSSFG--GKNKDFQK 163


>AJA90776.1 DNA-directed RNA polymerase V largest subunit [Ginkgo biloba]
          Length = 2506

 Score =  219 bits (559), Expect = 3e-58
 Identities = 119/260 (45%), Positives = 164/260 (63%), Gaps = 3/260 (1%)
 Frame = +1

Query: 772  YPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASK 951
            YP   + +  K E    +ELK++SK  +   +W+FL  +           R LLP+EA K
Sbjct: 332  YPNVIVSMVQKPEGIKIIELKISSKKSIPLGFWSFLERYGYPSFDGSS--RTLLPFEAMK 389

Query: 952  ILKKIPEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDALGSTVKI-SDYGVQMLKK 1128
            IL+++ +K +KK+  +     P  LIL+CIPVPPNC+RIPD  G+  +I SD+  Q+LKK
Sbjct: 390  ILEQLSDKTLKKLGRDASIKNPGALILECIPVPPNCVRIPDQWGNMSRIPSDHATQILKK 449

Query: 1129 IVSSVQD-KQSTMGKNKFSVHREATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSDEF 1305
            IV+  ++ ++S  G+  F  H    KELQSL TQYL+V GAPKV  +  P  N  G  + 
Sbjct: 450  IVTVAEEIRESRCGRANFKSHEAEAKELQSLCTQYLRVRGAPKVPGSEEPSFNFPGQVKT 509

Query: 1306 SK-SFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVF 1482
            S  SF+  WL+K+RS F+ KSCG SSR V+ GD YRGI EIGIP+EIA RVT EE V  +
Sbjct: 510  SNGSFSKIWLEKIRSFFLKKSCGSSSRSVIIGDAYRGIDEIGIPVEIANRVTFEERVNAY 569

Query: 1483 NKEKIRKMVEEGKCHTLSRK 1542
            N+EK++K+V++G C T   K
Sbjct: 570  NREKLQKVVDKGLCRTFVDK 589



 Score =  134 bits (338), Expect = 1e-29
 Identities = 68/155 (43%), Positives = 98/155 (63%), Gaps = 5/155 (3%)
 Frame = +1

Query: 67  PLASIAGIQFSISSSKEINKASVHAGDGVISTMQLSSPLLGIPNKTGKCEQCGTDKLNEC 246
           PLA +  I+F ++++KEI+K SV+    +    QLSS  LG+P K+ KCE CGTDKL+EC
Sbjct: 16  PLAKLTAIEFGLATAKEISKISVYGVSSIQHPSQLSSARLGLPVKSSKCESCGTDKLDEC 75

Query: 247 DGHFGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSKKNNISAEQLRDYVKAG----- 411
           +GHFGHI+LP PIYHPSH+  VK IL ++CLNC E+K K    S   L++ V+ G     
Sbjct: 76  EGHFGHIRLPTPIYHPSHVAEVKRILSRICLNCFELKKKTK--SRHSLKEMVQDGDQMAI 133

Query: 412 VNENGLVTLTGMKLKEESDDFASSVDGVGVLSKND 516
            ++  +  +    LK  +D+ +   DG  V+ K+D
Sbjct: 134 YDKYNIEDVKVSDLKSFNDELSWRKDGHNVVFKDD 168


>XP_002265533.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  173 bits (438), Expect = 2e-42
 Identities = 102/257 (39%), Positives = 144/257 (56%), Gaps = 2/257 (0%)
 Frame = +1

Query: 766  RDYPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEA 945
            +D P   ++     E A FLELK+ S+S   D +W FL  +           R+LLP E 
Sbjct: 123  QDSPQVSVREFRPTEGACFLELKIPSRSRPKDGFWDFLARYGYRYGHNLS--RILLPSEV 180

Query: 946  SKILKKIPEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQML 1122
             +IL++IPE   KK+ V       DG IL  +PVPPNC+ +PD   G ++  SD  V ML
Sbjct: 181  MEILRRIPEDTRKKL-VRKGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMSSDLSVSML 239

Query: 1123 KKIVSSVQD-KQSTMGKNKFSVHREATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSD 1299
            KK++  ++  K S  G+  F  H+     LQS   QYL+V G  K S + +  +    S 
Sbjct: 240  KKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSLD--TRFGSSK 297

Query: 1300 EFSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTV 1479
            E ++S    WL+KMR+LFI K  G SSR V+TGD Y+ + EIG+P EIA+R+T EE V V
Sbjct: 298  EPNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITFEERVNV 357

Query: 1480 FNKEKIRKMVEEGKCHT 1530
             N + ++ +V+E  C T
Sbjct: 358  HNMKHLQNLVDEKLCLT 374



 Score =  100 bits (249), Expect = 2e-18
 Identities = 52/107 (48%), Positives = 73/107 (68%), Gaps = 3/107 (2%)
 Frame = +1

Query: 79  IAGIQFSISSSKEINKASVHAGDGVIS-TMQLSSPLLGIPNKTGKCEQCGTDKLNECDGH 255
           I+GI+F +++ +EI  ASV   D  IS   QL++P LG+P + GKCE CGT +  +C+GH
Sbjct: 13  ISGIRFGLATRQEICIASV--SDCPISHASQLTNPFLGLPLEFGKCESCGTAEPGQCEGH 70

Query: 256 FGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSKK--NNISAEQL 390
           FG+I+LP PIYHP H+  +K +L  +CL CL+I+  K  NN   EQL
Sbjct: 71  FGYIELPIPIYHPGHVSELKRMLSLLCLKCLKIRKSKVTNNGITEQL 117


>CBI40152.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1890

 Score =  173 bits (438), Expect = 2e-42
 Identities = 102/257 (39%), Positives = 144/257 (56%), Gaps = 2/257 (0%)
 Frame = +1

Query: 766  RDYPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEA 945
            +D P   ++     E A FLELK+ S+S   D +W FL  +           R+LLP E 
Sbjct: 183  QDSPQVSVREFRPTEGACFLELKIPSRSRPKDGFWDFLARYGYRYGHNLS--RILLPSEV 240

Query: 946  SKILKKIPEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQML 1122
             +IL++IPE   KK+ V       DG IL  +PVPPNC+ +PD   G ++  SD  V ML
Sbjct: 241  MEILRRIPEDTRKKL-VRKGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMSSDLSVSML 299

Query: 1123 KKIVSSVQD-KQSTMGKNKFSVHREATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSD 1299
            KK++  ++  K S  G+  F  H+     LQS   QYL+V G  K S + +  +    S 
Sbjct: 300  KKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSLD--TRFGSSK 357

Query: 1300 EFSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTV 1479
            E ++S    WL+KMR+LFI K  G SSR V+TGD Y+ + EIG+P EIA+R+T EE V V
Sbjct: 358  EPNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITFEERVNV 417

Query: 1480 FNKEKIRKMVEEGKCHT 1530
             N + ++ +V+E  C T
Sbjct: 418  HNMKHLQNLVDEKLCLT 434



 Score = 97.8 bits (242), Expect = 1e-17
 Identities = 47/97 (48%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
 Frame = +1

Query: 79  IAGIQFSISSSKEINKASVHAGDGVIS-TMQLSSPLLGIPNKTGKCEQCGTDKLNECDGH 255
           I+GI+F +++ +EI  ASV   D  IS   QL++P LG+P + GKCE CGT +  +C+GH
Sbjct: 13  ISGIRFGLATRQEICIASV--SDCPISHASQLTNPFLGLPLEFGKCESCGTAEPGQCEGH 70

Query: 256 FGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSKK 366
           FG+I+LP PIYHP H+  +K +L  +CL CL+I+  K
Sbjct: 71  FGYIELPIPIYHPGHVSELKRMLSLLCLKCLKIRKSK 107


>AIO05699.1 DNA-directed RNA polymerase V subunit 1, partial [Cocos nucifera]
          Length = 1673

 Score =  172 bits (437), Expect = 2e-42
 Identities = 100/257 (38%), Positives = 150/257 (58%), Gaps = 2/257 (0%)
 Frame = +1

Query: 766  RDYPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEA 945
            RD PP  ++     +NA  LEL+V+S++ L D +W FL              R LLPYEA
Sbjct: 127  RDLPPISVKEVKTTDNALCLELRVSSRTRLRDGFWKFLDRFGFCYGDTYC--RPLLPYEA 184

Query: 946  SKILKKIPEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQML 1122
              ILK+IPE+  K++       +  G IL  +PVPPNC+ +P+   G ++  SD  + +L
Sbjct: 185  LNILKEIPEETKKRLAAKGYFPQI-GFILQYLPVPPNCLCVPEVSDGKSIMSSDISISLL 243

Query: 1123 KKIVSSVQ-DKQSTMGKNKFSVHREATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSD 1299
            K++++ ++  K+S  G   F  H   + +LQS  +QY+ + G PKV         A G+ 
Sbjct: 244  KRVLNKIELIKRSRSGFPNFKSHEVESNDLQSSISQYMHLRGTPKVPQDITK-KFAIGT- 301

Query: 1300 EFSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTV 1479
            E ++     WL+KMR+LFI K  G SSR V+TGD Y G+  IG+P EIAKR+T EE VTV
Sbjct: 302  EANECSTKLWLEKMRTLFIRKGSGFSSRSVITGDAYIGVNVIGLPSEIAKRITFEERVTV 361

Query: 1480 FNKEKIRKMVEEGKCHT 1530
             N ++++++V++G C T
Sbjct: 362  HNMKQLQEVVDKGLCVT 378



 Score = 99.8 bits (247), Expect = 3e-18
 Identities = 45/104 (43%), Positives = 71/104 (68%)
 Frame = +1

Query: 76  SIAGIQFSISSSKEINKASVHAGDGVISTMQLSSPLLGIPNKTGKCEQCGTDKLNECDGH 255
           S+ GI FS ++ +EI K +++    V    QL++P LG+P + GKCE CGT +  +C+GH
Sbjct: 14  SVRGISFSAATFEEIRKYAINDCP-VSHPSQLTNPFLGLPLEFGKCESCGTAEPGKCEGH 72

Query: 256 FGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSKKNNISAEQ 387
           FG+I+LP P+YHPSH+  +++IL  VCL C+ +K K  + S ++
Sbjct: 73  FGYIELPVPVYHPSHVSELRQILSLVCLKCMRMKGKVKHGSGKE 116


>XP_008812396.2 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
            1-like [Phoenix dactylifera]
          Length = 1656

 Score =  171 bits (434), Expect = 5e-42
 Identities = 99/257 (38%), Positives = 149/257 (57%), Gaps = 2/257 (0%)
 Frame = +1

Query: 766  RDYPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEA 945
            RD PP  ++     +NA  LEL+V+S++ L D +W FL              R LLPYEA
Sbjct: 85   RDLPPISVKEVKTTDNALCLELRVSSRTRLRDGFWNFLNRFGFCYGDTYC--RPLLPYEA 142

Query: 946  SKILKKIPEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQML 1122
              ILK+IPE+  K++       +  G IL  +PVPPNC+ +P+   G  +  SD  + +L
Sbjct: 143  LNILKEIPEETKKRLAAKGYFPQI-GFILQYLPVPPNCLCVPEISDGKNIMSSDISISLL 201

Query: 1123 KKIVSSVQ-DKQSTMGKNKFSVHREATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSD 1299
            K++++ ++  K+S  G   F  H   + +LQ   +QY+++ G PKV         A G+ 
Sbjct: 202  KRVLNKIELIKRSRSGFPNFKSHEVESNDLQLSISQYMRLRGTPKVPQDITK-KFAIGT- 259

Query: 1300 EFSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTV 1479
            E ++     WL+KMR+LFI K  G SSR V+TGD Y G+  IG+P EIAKR+T EE VTV
Sbjct: 260  EANECSTKLWLEKMRTLFIRKGSGFSSRSVITGDAYIGVNVIGLPSEIAKRITFEERVTV 319

Query: 1480 FNKEKIRKMVEEGKCHT 1530
             N ++++++V++G C T
Sbjct: 320  HNMKQLQEVVDKGLCVT 336


>XP_010932322.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis] XP_010932323.1 PREDICTED: DNA-directed RNA
            polymerase V subunit 1 [Elaeis guineensis] XP_019708936.1
            PREDICTED: DNA-directed RNA polymerase V subunit 1
            [Elaeis guineensis] XP_019708937.1 PREDICTED:
            DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis]
          Length = 1708

 Score =  171 bits (434), Expect = 5e-42
 Identities = 99/257 (38%), Positives = 150/257 (58%), Gaps = 2/257 (0%)
 Frame = +1

Query: 766  RDYPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEA 945
            RD PP  ++     +NA  LEL+V+S++ L D +W FL              R LLPYEA
Sbjct: 127  RDLPPISVKEVKTTDNALCLELRVSSRTRLRDGFWKFLDRFGFCYGDTYC--RPLLPYEA 184

Query: 946  SKILKKIPEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQML 1122
              ILK+IP++  K++       +  G IL  +PVPPNC+ +P+   G ++  SD  + +L
Sbjct: 185  LNILKEIPQETKKRLAAKGYFPQI-GFILQYLPVPPNCLCVPEVSDGKSIMSSDISISLL 243

Query: 1123 KKIVSSVQ-DKQSTMGKNKFSVHREATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSD 1299
            K++++ ++  K+S  G   F  H   + +LQS  +QY+ + G PKV         A G+ 
Sbjct: 244  KRVLNKIELIKRSRSGFPNFKSHEVESNDLQSSISQYMHLRGTPKVPQDITK-KFAIGT- 301

Query: 1300 EFSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTV 1479
            E ++     WL+KMR+LFI K  G SSR V+TGD Y G+  IG+P EIAKR+T EE VTV
Sbjct: 302  EANECSTKLWLEKMRTLFIRKGSGFSSRSVITGDAYIGVNVIGLPSEIAKRITFEERVTV 361

Query: 1480 FNKEKIRKMVEEGKCHT 1530
             N ++++++V++G C T
Sbjct: 362  HNMKQLQEVVDKGLCVT 378



 Score = 98.6 bits (244), Expect = 7e-18
 Identities = 44/96 (45%), Positives = 66/96 (68%)
 Frame = +1

Query: 76  SIAGIQFSISSSKEINKASVHAGDGVISTMQLSSPLLGIPNKTGKCEQCGTDKLNECDGH 255
           S+ GI FS ++ +EI   S++    V    QL++P LG+P + GKCE CGT +  +C+GH
Sbjct: 14  SVRGISFSAATIEEIRTCSINDCP-VSHPSQLTNPFLGLPLEFGKCESCGTAEPGKCEGH 72

Query: 256 FGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSK 363
           FG+I+LP P+YHPSH+  +++IL  VCL C+ +K K
Sbjct: 73  FGYIELPVPVYHPSHVSELRQILSLVCLKCMRMKGK 108


>ONK65887.1 uncharacterized protein A4U43_C06F2000 [Asparagus officinalis]
          Length = 1833

 Score =  170 bits (430), Expect = 2e-41
 Identities = 103/261 (39%), Positives = 149/261 (57%), Gaps = 6/261 (2%)
 Frame = +1

Query: 766  RDYPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEA 945
            RD PP  I+    ++ A  L+L V+SK  L + +W FL ++           R LLP EA
Sbjct: 129  RDIPPISIKEVKTSDGAVCLQLTVSSKLRLREGFWNFLSKYGFRHGDGTC--RTLLPLEA 186

Query: 946  SKILKKIPEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQML 1122
              ILK+IPE+  K++       + DG IL  +PVPPNC+ +P+   G +V  SD  + +L
Sbjct: 187  LNILKEIPEETKKRLVAKGYFPQ-DGYILQYLPVPPNCLLVPEISDGKSVMSSDISISLL 245

Query: 1123 KKIVSSVQ-DKQSTMGKNKFSVHREATKELQSLFTQYLKVMGAPK----VSTTFNPGSNA 1287
            K+++S ++  K+S  G   F  H     +LQ +  +Y+ + G+ K    VS     G +A
Sbjct: 246  KRVLSKIELIKRSRSGSPNFESHEVECNDLQLVIAEYMHLRGSAKAPHDVSKKLVLGPDA 305

Query: 1288 QGSDEFSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEE 1467
                   K+ +  WL+K+R+LFISK  G SSR V+TGD Y GI EIG+P EIAK+VT EE
Sbjct: 306  ------GKNSSKQWLEKIRTLFISKGSGFSSRSVITGDSYIGINEIGLPSEIAKKVTFEE 359

Query: 1468 WVTVFNKEKIRKMVEEGKCHT 1530
             VT  N E+++KMV +G C T
Sbjct: 360  RVTAHNLERLQKMVNDGLCVT 380



 Score = 95.1 bits (235), Expect = 9e-17
 Identities = 49/117 (41%), Positives = 76/117 (64%), Gaps = 1/117 (0%)
 Frame = +1

Query: 88  IQFSISSSKEINKASVHAGDGVIS-TMQLSSPLLGIPNKTGKCEQCGTDKLNECDGHFGH 264
           I+FSI++++E+ K S++  D  IS   QL++P LG+P ++GKCE CGT +   C+GHFG+
Sbjct: 18  IKFSIATAEEVCKYSIN--DCPISHPSQLTNPFLGLPLESGKCESCGTAESGNCEGHFGY 75

Query: 265 IKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSKKNNISAEQLRDYVKAGVNENGLVT 435
           I+LP P+YHP H+  +++IL  VC +C+  K  K       ++D  KAG + N   T
Sbjct: 76  IELPVPVYHPLHISELRDILSLVCFHCMRTKKGK-------IKD--KAGKSSNSAAT 123


>EPS67715.1 hypothetical protein M569_07058, partial [Genlisea aurea]
          Length = 1379

 Score =  160 bits (406), Expect = 2e-38
 Identities = 96/244 (39%), Positives = 138/244 (56%), Gaps = 2/244 (0%)
 Frame = +1

Query: 805  NENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKILKKIPEKIMK 984
            ++ AS+LELKV  KS L + YW FL +H           R LLP E   ILKK+P++  K
Sbjct: 137  SDGASYLELKVPPKSKLREGYWNFLEKHGFRYGHTYS--RPLLPSEVMSILKKLPKET-K 193

Query: 985  KICVNPLAVKPDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKIVSSVQD-KQS 1158
            K  ++      +G +L  +PVPPNC+ +PD   G +    DY + +LKK++  V+  K S
Sbjct: 194  KSLLSRGYFPQEGYVLRFLPVPPNCLCVPDISDGVSTMSKDYSITLLKKVLRQVEVIKNS 253

Query: 1159 TMGKNKFSVHREATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSDEFSKSFANFWLDK 1338
              G   F  H     ELQ+  +QYL+  G  K +   +  S      E + S    WL+K
Sbjct: 254  RSGMPNFESHEIEANELQASVSQYLQFRGTGKAARDVD--SRFGVHKEINSSSTKAWLEK 311

Query: 1339 MRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNKEKIRKMVEEG 1518
            M++LFI K  G SSR VVTGD ++G+ EIG+P EIA+++T EE V V N + ++K+V+E 
Sbjct: 312  MKTLFIRKGSGFSSRSVVTGDAFKGVSEIGLPYEIAQKITFEERVNVHNIDFLQKLVDEK 371

Query: 1519 KCHT 1530
             C T
Sbjct: 372  LCLT 375



 Score =  101 bits (252), Expect = 7e-19
 Identities = 47/106 (44%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
 Frame = +1

Query: 67  PLASIAGIQFSISSSKEINKASVHAGDGVISTMQLSSPLLGIPNKTGKCEQCGTDKLNEC 246
           P   I+GI F +++ +EI K+S+ +   +    QLS+P LG+P  +GKCE CGT +  +C
Sbjct: 10  PEGMISGISFGLATFQEICKSSI-SDCPITHASQLSNPFLGLPLDSGKCESCGTGEPGQC 68

Query: 247 DGHFGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSKK-NNISA 381
           +GHFG+I+ P PIYHP H+  +K++L  +CL CL++K++K  NI A
Sbjct: 69  EGHFGYIEFPTPIYHPDHITELKKMLSLLCLKCLKLKTRKVKNIGA 114


>GAV75269.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1_3
            domain-containing protein/RNA_pol_Rpb1_1
            domain-containing protein/RNA_pol_Rpb1_5
            domain-containing protein/DUF3223 domain-containing
            protein [Cephalotus follicularis]
          Length = 1964

 Score =  160 bits (406), Expect = 2e-38
 Identities = 95/254 (37%), Positives = 139/254 (54%), Gaps = 2/254 (0%)
 Frame = +1

Query: 775  PPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKI 954
            P   ++     + A +LELK+ S+S   D +W FL  +           R LLP E  +I
Sbjct: 129  PQVSVKEVKTTDGAFYLELKLPSRSRPQDGFWNFLERYGFHYGDGST--RTLLPCEVMEI 186

Query: 955  LKKIPEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKI 1131
            LK+IP++  K++       + DG ++  +PVPPNC+ +P+   G +V  SD  + MLKK+
Sbjct: 187  LKRIPQETRKRLAGKGYFPQ-DGYVIHYLPVPPNCLSVPEVSDGVSVMSSDLSISMLKKV 245

Query: 1132 VSSVQD-KQSTMGKNKFSVHREATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSDEFS 1308
            +  V+  K S  G   F  H     +LQS   QYL+V G  + S   +     +   E S
Sbjct: 246  IKQVEIIKSSRSGTPNFESHEVEANDLQSAVDQYLQVRGTSRGSRDVDTRFGVK--KESS 303

Query: 1309 KSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNK 1488
             S    WL+KMR+LFI K  G SSR V+TGD Y+G+ EIGIPLEIA+R+T EE V + N 
Sbjct: 304  TSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKGVNEIGIPLEIAQRITFEERVNMHNM 363

Query: 1489 EKIRKMVEEGKCHT 1530
            + ++ +V+   C T
Sbjct: 364  KYLQDLVDNKLCLT 377



 Score =  100 bits (250), Expect = 1e-18
 Identities = 47/97 (48%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
 Frame = +1

Query: 79  IAGIQFSISSSKEINKASVHAGDGVIS-TMQLSSPLLGIPNKTGKCEQCGTDKLNECDGH 255
           I GI+F ++S +EI  AS+   D  IS   QL++P LG+P + GKCE CGT +  +C+GH
Sbjct: 14  IVGIKFGLASRQEICTASI--SDAPISHASQLTNPFLGLPLQFGKCESCGTSEPGKCEGH 71

Query: 256 FGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSKK 366
           FG+I+LP PIYHPSH+  +K +L  +CL CL+++  K
Sbjct: 72  FGYIELPIPIYHPSHISELKRMLSLLCLKCLKMRKNK 108


>KMZ58649.1 DNA-directed RNA polymerase [Zostera marina]
          Length = 2065

 Score =  160 bits (406), Expect = 2e-38
 Identities = 95/255 (37%), Positives = 143/255 (56%), Gaps = 2/255 (0%)
 Frame = +1

Query: 766  RDYPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEA 945
            R  PP  +    K + A+ LELKV++++ + + +W FL ++           R LLP E 
Sbjct: 129  RGLPPISVDEVTK-DGATSLELKVSTQTMIREGFWKFLDKYGFHYYDDSYC-RPLLPSEV 186

Query: 946  SKILKKIPEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQML 1122
             ++LK+IPE   +K+      +   G IL  IPVPPNC+ +PD   G +   +D  + ML
Sbjct: 187  LEMLKRIPEDTRRKLTAKG-HIPQYGYILQSIPVPPNCLHVPDISDGKSSMCNDISIPML 245

Query: 1123 KKIVSSVQ-DKQSTMGKNKFSVHREATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSD 1299
            KK+++ V   K+S  G   F  H   + +LQ    QY+++ G  K    F+       S 
Sbjct: 246  KKVLNKVDLIKKSRSGPPNFESHMIESNDLQVSIAQYMRLRGTKKAP--FDNSRKMHPSS 303

Query: 1300 EFSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTV 1479
            E + S    WL+KMRSLFISK  G SSR ++TGD Y+GI EIGIP EIA ++T EE VT 
Sbjct: 304  EANNSSGKQWLEKMRSLFISKGSGYSSRSIITGDSYKGINEIGIPSEIANKITFEERVTA 363

Query: 1480 FNKEKIRKMVEEGKC 1524
             N ++++++V+  +C
Sbjct: 364  LNLKRLQELVDNRQC 378



 Score = 93.2 bits (230), Expect = 4e-16
 Identities = 44/103 (42%), Positives = 65/103 (63%)
 Frame = +1

Query: 76  SIAGIQFSISSSKEINKASVHAGDGVISTMQLSSPLLGIPNKTGKCEQCGTDKLNECDGH 255
           SI  ++F I++  EI   SV+    +    QL +P LG+P ++G CE CGT ++ +C+GH
Sbjct: 15  SIRSVKFGIATPNEIRTFSVN-DFSITHASQLMNPFLGLPLESGNCESCGTLEVGKCEGH 73

Query: 256 FGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSKKNNISAE 384
           FG I LP P+YHP H+  +K +L  VCL CL +  KK+NI  +
Sbjct: 74  FGFIDLPTPVYHPFHVSHLKTMLNLVCLKCLRV--KKSNIKLD 114


>XP_010246063.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera]
            XP_010246064.1 PREDICTED: DNA-directed RNA polymerase V
            subunit 1 [Nelumbo nucifera] XP_010246066.1 PREDICTED:
            DNA-directed RNA polymerase V subunit 1 [Nelumbo
            nucifera]
          Length = 1908

 Score =  160 bits (405), Expect = 3e-38
 Identities = 94/256 (36%), Positives = 140/256 (54%), Gaps = 2/256 (0%)
 Frame = +1

Query: 769  DYPPFKIQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEAS 948
            D P   I+     + A +LELK++S+S   D +W FL  +           R LLP E+ 
Sbjct: 129  DLPQLSIKEVKTTDGACYLELKISSRSRSQDGFWNFLERYGFRYGDGSQ--RTLLPSESL 186

Query: 949  KILKKIPEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLK 1125
            +ILK+IPE+  +K+ +        G IL  +PVPPNC+ +PD   G ++  SD  + ML+
Sbjct: 187  EILKRIPEETRRKL-IGKGHFPQYGYILQYLPVPPNCLSVPDISDGISIMSSDLSITMLR 245

Query: 1126 KIVSSVQD-KQSTMGKNKFSVHREATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSDE 1302
            K++  ++  + S  G   F        ELQS    YL V G  K S   +   +   S  
Sbjct: 246  KVLKQIEIIRSSRSGAPNFESQEIEANELQSTVANYLHVRGTAKASRDVDTRFSV--SKG 303

Query: 1303 FSKSFANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVF 1482
             + +    WL+KMR+LFISK  G SSR V+TGD Y+GI EIG+P E+A+R+T EE V++ 
Sbjct: 304  VNDTCTKAWLEKMRTLFISKGSGFSSRSVITGDAYKGINEIGLPSEVAQRITFEEKVSIH 363

Query: 1483 NKEKIRKMVEEGKCHT 1530
            N + ++K+V+   C T
Sbjct: 364  NMDHLQKLVDNKLCLT 379



 Score = 99.8 bits (247), Expect = 3e-18
 Identities = 47/97 (48%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
 Frame = +1

Query: 79  IAGIQFSISSSKEINKASVHAGDGVIS-TMQLSSPLLGIPNKTGKCEQCGTDKLNECDGH 255
           I GI+F++++S+EI  +SV+  D  IS   QL++P LG+P + G CE CGT +  +C+GH
Sbjct: 15  ITGIRFNLATSQEICTSSVN--DCPISHPSQLTNPFLGLPLEYGNCESCGTSEPGKCEGH 72

Query: 256 FGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSKK 366
           FG+I+LP PIYHP H+  +K IL+ +CL CL +K +K
Sbjct: 73  FGYIQLPVPIYHPCHVSELKHILDLICLKCLRMKMRK 109


>XP_011655250.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis sativus]
            XP_011655251.1 PREDICTED: DNA-directed RNA polymerase V
            subunit 1 [Cucumis sativus] KGN51090.1 hypothetical
            protein Csa_5G435050 [Cucumis sativus]
          Length = 1963

 Score =  160 bits (405), Expect = 3e-38
 Identities = 100/252 (39%), Positives = 144/252 (57%), Gaps = 4/252 (1%)
 Frame = +1

Query: 787  IQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKILKKI 966
            I+ + K + AS+L+LKV S++ L + +W FL  +           R LLP E  ++LKKI
Sbjct: 134  IREAKKADGASYLQLKVPSRTSLQERFWDFLERYGFRYGDNFT--RTLLPCEVKEMLKKI 191

Query: 967  PEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKIVSSV 1143
            P +  KK+       + DG IL  +PVPPNC+ +P+   G TV  SD  V MLKKI+  V
Sbjct: 192  PNETRKKLAGRGYYPQ-DGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQV 250

Query: 1144 QD-KQSTMGKNKFSVHREATKELQSLFTQYLKVMGAPKVSTTFNP--GSNAQGSDEFSKS 1314
            +  K S  G   F  H     +LQ    QYL+V G  K S   +   G N + +D  +K+
Sbjct: 251  EIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKA 310

Query: 1315 FANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNKEK 1494
                WL+KMR+LFI K  G SSR V+TGD Y+ + EIG+P E+A+R+T EE V+V N   
Sbjct: 311  ----WLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 366

Query: 1495 IRKMVEEGKCHT 1530
            ++++V++  C T
Sbjct: 367  LQELVDKKLCLT 378



 Score =  100 bits (250), Expect = 1e-18
 Identities = 45/98 (45%), Positives = 70/98 (71%)
 Frame = +1

Query: 73  ASIAGIQFSISSSKEINKASVHAGDGVISTMQLSSPLLGIPNKTGKCEQCGTDKLNECDG 252
           A I GI+FS+++ +EI  A++ +   +    QLS+P LG+P + GKCE CGT +  +C+G
Sbjct: 13  AEIVGIRFSLANGQEICIAAI-SDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEG 71

Query: 253 HFGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSKK 366
           HFG+I+LP PIYHP+H+  +K++L  +CL CL++K  K
Sbjct: 72  HFGYIELPIPIYHPNHITELKKMLSLLCLKCLKMKKTK 109


>XP_008465860.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis melo]
          Length = 1964

 Score =  160 bits (405), Expect = 3e-38
 Identities = 100/252 (39%), Positives = 144/252 (57%), Gaps = 4/252 (1%)
 Frame = +1

Query: 787  IQISGKNENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKILKKI 966
            I+ + K + AS+L+LKV S++ L + +W FL  +           R LLP E  ++LKKI
Sbjct: 134  IREAKKADGASYLQLKVPSRTSLQERFWDFLERYGFRYGDNFT--RTLLPCEVKEMLKKI 191

Query: 967  PEKIMKKICVNPLAVKPDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKIVSSV 1143
            P +  KK+       + DG IL  +PVPPNC+ +P+   G TV  SD  V MLKKI+  V
Sbjct: 192  PNETRKKLAGRGYYPQ-DGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQV 250

Query: 1144 QD-KQSTMGKNKFSVHREATKELQSLFTQYLKVMGAPKVSTTFNP--GSNAQGSDEFSKS 1314
            +  K S  G   F  H     +LQ    QYL+V G  K S   +   G N + +D  +K+
Sbjct: 251  EIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKA 310

Query: 1315 FANFWLDKMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNKEK 1494
                WL+KMR+LFI K  G SSR V+TGD Y+ + EIG+P E+A+R+T EE V+V N   
Sbjct: 311  ----WLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 366

Query: 1495 IRKMVEEGKCHT 1530
            ++++V++  C T
Sbjct: 367  LQELVDKKLCLT 378



 Score = 99.8 bits (247), Expect = 3e-18
 Identities = 44/98 (44%), Positives = 70/98 (71%)
 Frame = +1

Query: 73  ASIAGIQFSISSSKEINKASVHAGDGVISTMQLSSPLLGIPNKTGKCEQCGTDKLNECDG 252
           A I GI+FS+++ +EI  A++ +   +    QLS+P LG+P + GKCE CGT +  +C+G
Sbjct: 13  AEIVGIRFSLANGQEICIAAI-SDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEG 71

Query: 253 HFGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSKK 366
           HFG+I+LP PIYHP+H+  ++++L  +CL CL++K  K
Sbjct: 72  HFGYIELPIPIYHPNHITELRKMLSLLCLKCLKMKKTK 109


>XP_011089162.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Sesamum indicum]
          Length = 2096

 Score =  159 bits (401), Expect = 1e-37
 Identities = 92/244 (37%), Positives = 138/244 (56%), Gaps = 2/244 (0%)
 Frame = +1

Query: 805  NENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKILKKIPEKIMK 984
            ++ A +LELKV S+S L + +W FL ++           R LLP E   IL+KIP++  +
Sbjct: 126  SDGAYYLELKVPSRSRLQEGFWYFLEKYGFRYGDMYS--RPLLPSEVMAILRKIPQETKR 183

Query: 985  KICVNPLAVKPDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKIVSSVQD-KQS 1158
            K+       + DG IL  +PVPPNC+ +PD   G +   +DY + +LKK++  V+  K S
Sbjct: 184  KLSAKGYFPQ-DGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLLKKVLRQVEIIKNS 242

Query: 1159 TMGKNKFSVHREATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSDEFSKSFANFWLDK 1338
              GK  F  H     +LQ+   QYL+  G  K S   +       + E + S    WL+K
Sbjct: 243  RSGKPNFESHEIEANDLQAAVAQYLQFRGTGKASRDVDTRFGV--NKEINASSTKAWLEK 300

Query: 1339 MRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNKEKIRKMVEEG 1518
            M++LFI K  G SSR V+TGD ++G+ EIG+P EIA+++T EE V   N + ++K+V+E 
Sbjct: 301  MKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNMQFLQKLVDEK 360

Query: 1519 KCHT 1530
             C T
Sbjct: 361  LCLT 364



 Score =  105 bits (262), Expect = 4e-20
 Identities = 50/99 (50%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
 Frame = +1

Query: 73  ASIAGIQFSISSSKEINKASVHAGDGVIS-TMQLSSPLLGIPNKTGKCEQCGTDKLNECD 249
           A I GI+F +++ +EI KAS+   D  IS   QLS+P LG+P +TGKCE CGT +  +C+
Sbjct: 12  AKIKGIRFGLATRQEICKASI--SDCPISHASQLSNPFLGLPLETGKCESCGTGEAGQCE 69

Query: 250 GHFGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSKK 366
           GHFG+I+LP PIYHP H+  +K +L  +CL CL+ K++K
Sbjct: 70  GHFGYIELPTPIYHPDHVGELKRMLSLLCLKCLKFKNRK 108


>XP_002303926.2 hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
            EEE78905.2 hypothetical protein POPTR_0003s19630g
            [Populus trichocarpa]
          Length = 1920

 Score =  158 bits (400), Expect = 1e-37
 Identities = 96/243 (39%), Positives = 134/243 (55%), Gaps = 2/243 (0%)
 Frame = +1

Query: 808  ENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKILKKIPEKIMKK 987
            + A FLELK+ S+S L D  W FL  +           R LLP E  +ILK+IP +  KK
Sbjct: 143  DGACFLELKLPSRSRLRDGCWNFLERYGFRYGDDFT--RPLLPCEVMQILKRIPAETRKK 200

Query: 988  ICVNPLAVKPDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKIVSSVQD-KQST 1161
            +       + DG IL  +PVPPNC+ +P    G TV  SD  + MLKK++   +  + S 
Sbjct: 201  LSGKGYFPQ-DGYILQQLPVPPNCLSVPVVSDGITVMSSDLSISMLKKVLKQAEVIRSSR 259

Query: 1162 MGKNKFSVHREATKELQSLFTQYLKVMGAPKVSTTFNPGSNAQGSDEFSKSFANFWLDKM 1341
             G   F  H++    LQS+  QYL+V G  K S   +     +   E S+S    WL+KM
Sbjct: 260  SGAPNFDAHKDEATSLQSMVDQYLQVRGTTKTSRDVDTRYGVK--KESSESTTKAWLEKM 317

Query: 1342 RSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNKEKIRKMVEEGK 1521
            R+LFI K  G SSR V+TGD Y  + ++GIP EIA+R+T EE V+V N   ++++V+   
Sbjct: 318  RTLFIRKGSGFSSRSVITGDAYTLVNQVGIPYEIAQRITFEERVSVHNMRYLQELVDNKL 377

Query: 1522 CHT 1530
            C T
Sbjct: 378  CLT 380



 Score =  103 bits (258), Expect = 1e-19
 Identities = 54/129 (41%), Positives = 81/129 (62%), Gaps = 5/129 (3%)
 Frame = +1

Query: 79  IAGIQFSISSSKEINKASVHAGDGVIS-TMQLSSPLLGIPNKTGKCEQCGTDKLNECDGH 255
           I GI+F +++ KEI  AS+   D  IS + QL++P LG+P + GKCE CGT +  +C+GH
Sbjct: 14  ITGIRFGLATQKEICTASI--SDCPISHSSQLTNPFLGLPLEFGKCESCGTSEPGKCEGH 71

Query: 256 FGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSK----KNNISAEQLRDYVKAGVNEN 423
           FG I LP PIYHPSH+  +K +L  +CL CL++K      K+N  AE+L    +  + E 
Sbjct: 72  FGFIHLPIPIYHPSHISELKRMLSLICLKCLKLKRNKIQIKSNGVAERLLSCCEVSIKEC 131

Query: 424 GLVTLTGMK 450
             +++  +K
Sbjct: 132 AQISIREVK 140


>OAY53390.1 hypothetical protein MANES_04G159600 [Manihot esculenta]
          Length = 1937

 Score =  157 bits (397), Expect = 3e-37
 Identities = 94/245 (38%), Positives = 138/245 (56%), Gaps = 4/245 (1%)
 Frame = +1

Query: 808  ENASFLELKVTSKSHLFDDYWTFLGEHXXXXXXXXXXXRVLLPYEASKILKKIPEKIMKK 987
            + A FL+LK+ S+  + D +W FL  +           R LLP E  ++L++IP++  KK
Sbjct: 139  DGAFFLKLKLPSRMRMRDGFWNFLERYGFRYGDDII--RTLLPCEVMEMLRRIPQETRKK 196

Query: 988  ICVNPLAVKPDGLILDCIPVPPNCIRIPDAL-GSTVKISDYGVQMLKKIVSSVQD-KQST 1161
            +       + DG I+  IPVPPNC+ +PD   G +V  SD  + MLKK++  V+  K S 
Sbjct: 197  LARKGYFPQ-DGYIMRYIPVPPNCLSVPDISDGISVMSSDLSISMLKKVLKQVEIIKSSR 255

Query: 1162 MGKNKFSVHREATKELQSLFTQYLKVMGAPKVSTTFNP--GSNAQGSDEFSKSFANFWLD 1335
             G   F  H     +LQS   QYL+V G  + S       G + + +D  +K+    WL+
Sbjct: 256  SGPANFESHEVEAVDLQSAVDQYLQVRGTARASRDVEARFGVHKESNDSSTKA----WLE 311

Query: 1336 KMRSLFISKSCGLSSRCVVTGDVYRGIGEIGIPLEIAKRVTVEEWVTVFNKEKIRKMVEE 1515
            KMR+LFI K  G SSR V+TGD Y+ + EIGIP EIA+R+T EE V V N + ++++V+ 
Sbjct: 312  KMRTLFIRKGSGFSSRSVITGDAYKRVNEIGIPFEIAQRITFEERVNVHNIKHLQELVDN 371

Query: 1516 GKCHT 1530
              C T
Sbjct: 372  KLCLT 376



 Score =  105 bits (263), Expect = 3e-20
 Identities = 50/125 (40%), Positives = 83/125 (66%), Gaps = 1/125 (0%)
 Frame = +1

Query: 79  IAGIQFSISSSKEINKASVHAGDGVIS-TMQLSSPLLGIPNKTGKCEQCGTDKLNECDGH 255
           + GI+F +++ KEI+ ASV   D  IS + QL++P LG+P + GKCE CGT +  +C+GH
Sbjct: 14  VVGIRFGLATHKEISTASV--SDCPISHSSQLTNPFLGLPLEFGKCESCGTSEPGKCEGH 71

Query: 256 FGHIKLPFPIYHPSHMKFVKEILEKVCLNCLEIKSKKNNISAEQLRDYVKAGVNENGLVT 435
           FG+I+LP PIYHPSH+  +K +L  +CL CL++K+ K  + +  + + + +   E   ++
Sbjct: 72  FGYIELPIPIYHPSHVSELKRLLSLLCLKCLKMKTNKFQVKSNGVAERLFSCCEEASQIS 131

Query: 436 LTGMK 450
           +  +K
Sbjct: 132 IKDIK 136