BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00018690
         (403 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_016721585.1 PREDICTED: pentatricopeptide repeat-containing pr...    91   1e-18
XP_017620270.1 PREDICTED: pentatricopeptide repeat-containing pr...    89   5e-18
XP_016674291.1 PREDICTED: pentatricopeptide repeat-containing pr...    89   5e-18
XP_012476490.1 PREDICTED: pentatricopeptide repeat-containing pr...    89   5e-18
XP_019247985.1 PREDICTED: pentatricopeptide repeat-containing pr...    89   7e-18
XP_009768660.1 PREDICTED: pentatricopeptide repeat-containing pr...    89   7e-18
OMO80366.1 hypothetical protein COLO4_24134 [Corchorus olitorius]      88   1e-17
XP_006428236.1 hypothetical protein CICLE_v10011195mg [Citrus cl...    87   2e-17
XP_012835298.1 PREDICTED: pentatricopeptide repeat-containing pr...    87   2e-17
XP_006382303.1 hypothetical protein POPTR_0005s00800g [Populus t...    87   3e-17
XP_009407923.2 PREDICTED: pentatricopeptide repeat-containing pr...    87   3e-17
XP_015874755.1 PREDICTED: pentatricopeptide repeat-containing pr...    87   3e-17
XP_011023834.1 PREDICTED: pentatricopeptide repeat-containing pr...    86   4e-17
XP_017977106.1 PREDICTED: pentatricopeptide repeat-containing pr...    86   4e-17
EOY11720.1 Pentatricopeptide repeat (PPR) superfamily protein is...    86   4e-17
KRH76357.1 hypothetical protein GLYMA_01G147900 [Glycine max]          86   6e-17
XP_002466087.1 hypothetical protein SORBIDRAFT_01g000980 [Sorghu...    86   6e-17
KXG37111.1 hypothetical protein SORBI_001G010000 [Sorghum bicolor]     86   6e-17
KHN41721.1 Pentatricopeptide repeat-containing protein, mitochon...    86   6e-17
XP_011465325.1 PREDICTED: pentatricopeptide repeat-containing pr...    83   1e-16

>XP_016721585.1 PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Gossypium hirsutum]
          Length = 703

 Score = 90.5 bits (223), Expect = 1e-18
 Identities = 51/120 (42%), Positives = 71/120 (59%), Gaps = 7/120 (5%)
 Frame = +2

Query: 62  ALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKAREL 241
           AL + ++ S NSI+A + +NN+ D A  +F+ +P  NI+SW  LI+GY K   + +ARE+
Sbjct: 41  ALPNKTVDSWNSIIAGYFQNNQPDEALLLFNKMPEKNIVSWNGLISGYIKNGMVTEAREV 100

Query: 242 FDKMPERNDNRVCAKLYG-------GRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
           FDKMPERN     A + G       G         P+KNVV+WT+ML G    GRID A+
Sbjct: 101 FDKMPERNVVSWTAMIRGHVQEGMMGEAVSLFWLMPEKNVVSWTVMLGGLIHEGRIDEAR 160



 Score = 68.6 bits (166), Expect = 7e-11
 Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
 Frame = +2

Query: 113 VKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN----DNRVC 280
           +   +ID A+++FD +P  ++++ T +IAGY K  ++  ARE+FD+MP RN       + 
Sbjct: 151 IHEGRIDEARRLFDMMPEKDVVARTNMIAGYCKEGRLSDAREIFDEMPWRNVVAWTTMIT 210

Query: 281 AKLYGGRGQIT---L*SGPQKNVVTWTIMLKGYTDRGRIDGA 397
             +   R  +        P KN V+WT ML GYT  GRI+ A
Sbjct: 211 GYVQNNRVDVARKLFEVMPVKNEVSWTAMLMGYTQCGRIEAA 252



 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
 Frame = +2

Query: 2   GNLSSYHNNAAPNTYNNSIIALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIIS 181
           G +S Y  N            + + ++ S  +++  HV+   +  A  +F  +P  N++S
Sbjct: 83  GLISGYIKNGMVTEAREVFDKMPERNVVSWTAMIRGHVQEGMMGEAVSLFWLMPEKNVVS 142

Query: 182 WTTLIAGYTKLRKIEKARELFDKMPERN----DNRVCAKLYGGR---GQITL*SGPQKNV 340
           WT ++ G     +I++AR LFD MPE++     N +      GR    +      P +NV
Sbjct: 143 WTVMLGGLIHEGRIDEARRLFDMMPEKDVVARTNMIAGYCKEGRLSDAREIFDEMPWRNV 202

Query: 341 VTWTIMLKGYTDRGRIDGAQ 400
           V WT M+ GY    R+D A+
Sbjct: 203 VAWTTMITGYVQNNRVDVAR 222


>XP_017620270.1 PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Gossypium arboreum]
          Length = 703

 Score = 89.0 bits (219), Expect = 5e-18
 Identities = 50/119 (42%), Positives = 69/119 (57%), Gaps = 7/119 (5%)
 Frame = +2

Query: 65  LSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELF 244
           L + ++ S NSI+A + +NN+ D A  +F  +P  NI+SW  LI+GY K   + +ARE+F
Sbjct: 42  LPNKTVDSWNSIIAGYFQNNQPDEALLLFKKMPEKNIVSWNGLISGYIKNGMVSEAREVF 101

Query: 245 DKMPERNDNRVCAKLYG-------GRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
           DKMPERN     A + G       G         P+KNVV+WT+ML G    GRID A+
Sbjct: 102 DKMPERNVVSWTAMIRGYVQEGMTGEAVSLFWLMPEKNVVSWTVMLGGLIQEGRIDEAR 160



 Score = 69.7 bits (169), Expect = 3e-11
 Identities = 33/104 (31%), Positives = 58/104 (55%)
 Frame = +2

Query: 86  SQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN 265
           ++ ++MA + K  ++  A+++FD +P  N+++WTT+I GY +  +++ AR+LF+ MP +N
Sbjct: 173 ARTNMMAGYCKEGRLSDAREIFDEMPWRNVVAWTTMITGYVQNNRVDVARKLFEVMPVKN 232

Query: 266 DNRVCAKLYGGRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGA 397
           +                        V+WT ML GYT  GRI+ A
Sbjct: 233 E------------------------VSWTAMLMGYTQCGRIEAA 252



 Score = 63.2 bits (152), Expect = 5e-09
 Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
 Frame = +2

Query: 2   GNLSSYHNNAAPNTYNNSIIALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIIS 181
           G +S Y  N   +        + + ++ S  +++  +V+      A  +F  +P  N++S
Sbjct: 83  GLISGYIKNGMVSEAREVFDKMPERNVVSWTAMIRGYVQEGMTGEAVSLFWLMPEKNVVS 142

Query: 182 WTTLIAGYTKLRKIEKARELFDKMPERN----DNRVCAKLYGGR---GQITL*SGPQKNV 340
           WT ++ G  +  +I++AR L+D MPE++     N +      GR    +      P +NV
Sbjct: 143 WTVMLGGLIQEGRIDEARRLYDMMPEKDVVARTNMMAGYCKEGRLSDAREIFDEMPWRNV 202

Query: 341 VTWTIMLKGYTDRGRIDGAQ 400
           V WT M+ GY    R+D A+
Sbjct: 203 VAWTTMITGYVQNNRVDVAR 222


>XP_016674291.1 PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Gossypium hirsutum]
          Length = 703

 Score = 89.0 bits (219), Expect = 5e-18
 Identities = 50/119 (42%), Positives = 69/119 (57%), Gaps = 7/119 (5%)
 Frame = +2

Query: 65  LSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELF 244
           L + ++ S NSI+A + +NN+ D A  +F  +P  NI+SW  LI+GY K   + +ARE+F
Sbjct: 42  LPNTTVDSWNSIIAGYFQNNQPDEALLLFKKMPEKNIVSWNGLISGYIKNGMVSEAREVF 101

Query: 245 DKMPERNDNRVCAKLYG-------GRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
           DKMPERN     A + G       G         P+KNVV+WT+ML G    GRID A+
Sbjct: 102 DKMPERNVVSWTAMIRGYVQEGMTGEAVSLFWLMPEKNVVSWTVMLGGLIQEGRIDEAR 160



 Score = 69.7 bits (169), Expect = 3e-11
 Identities = 33/104 (31%), Positives = 58/104 (55%)
 Frame = +2

Query: 86  SQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN 265
           ++ ++MA + K  ++  A+++FD +P  N+++WTT+I GY +  +++ AR+LF+ MP +N
Sbjct: 173 ARTNMMAGYCKEGRLSDAREIFDEMPWRNVVAWTTMITGYVQNNRVDVARKLFEVMPVKN 232

Query: 266 DNRVCAKLYGGRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGA 397
           +                        V+WT ML GYT  GRI+ A
Sbjct: 233 E------------------------VSWTAMLMGYTQCGRIEAA 252



 Score = 63.2 bits (152), Expect = 5e-09
 Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
 Frame = +2

Query: 2   GNLSSYHNNAAPNTYNNSIIALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIIS 181
           G +S Y  N   +        + + ++ S  +++  +V+      A  +F  +P  N++S
Sbjct: 83  GLISGYIKNGMVSEAREVFDKMPERNVVSWTAMIRGYVQEGMTGEAVSLFWLMPEKNVVS 142

Query: 182 WTTLIAGYTKLRKIEKARELFDKMPERN----DNRVCAKLYGGR---GQITL*SGPQKNV 340
           WT ++ G  +  +I++AR L+D MPE++     N +      GR    +      P +NV
Sbjct: 143 WTVMLGGLIQEGRIDEARRLYDMMPEKDVVARTNMMAGYCKEGRLSDAREIFDEMPWRNV 202

Query: 341 VTWTIMLKGYTDRGRIDGAQ 400
           V WT M+ GY    R+D A+
Sbjct: 203 VAWTTMITGYVQNNRVDVAR 222


>XP_012476490.1 PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Gossypium raimondii] KJB26286.1
           hypothetical protein B456_004G235300 [Gossypium
           raimondii]
          Length = 703

 Score = 89.0 bits (219), Expect = 5e-18
 Identities = 50/119 (42%), Positives = 70/119 (58%), Gaps = 7/119 (5%)
 Frame = +2

Query: 65  LSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELF 244
           L + ++ S NSI+A + +NN+ D A  +F+ +P  NI+SW  LI+GY K   + +ARE+F
Sbjct: 42  LPNKTVDSWNSIIAGYFQNNQPDEALLLFNKMPEKNIVSWNGLISGYIKNGMVTEAREVF 101

Query: 245 DKMPERNDNRVCAKLYG-------GRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
           DKMPERN     A + G       G         P+KNVV+WT+ML G    GRID A+
Sbjct: 102 DKMPERNVVSWTAMIRGHVQEGMMGEAVSLFWLMPEKNVVSWTVMLGGLIHEGRIDEAR 160



 Score = 68.6 bits (166), Expect = 7e-11
 Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
 Frame = +2

Query: 113 VKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN----DNRVC 280
           +   +ID A+++FD +P  ++++ T +IAGY K  ++  ARE+FD+MP RN       + 
Sbjct: 151 IHEGRIDEARRLFDMMPEKDVVARTNMIAGYCKEGRLSDAREIFDEMPWRNVVAWTTMIT 210

Query: 281 AKLYGGRGQIT---L*SGPQKNVVTWTIMLKGYTDRGRIDGA 397
             +   R  +        P KN V+WT ML GYT  GRI+ A
Sbjct: 211 GYVQNNRVDVARKLFEVMPVKNEVSWTAMLMGYTQCGRIEAA 252



 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
 Frame = +2

Query: 2   GNLSSYHNNAAPNTYNNSIIALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIIS 181
           G +S Y  N            + + ++ S  +++  HV+   +  A  +F  +P  N++S
Sbjct: 83  GLISGYIKNGMVTEAREVFDKMPERNVVSWTAMIRGHVQEGMMGEAVSLFWLMPEKNVVS 142

Query: 182 WTTLIAGYTKLRKIEKARELFDKMPERN----DNRVCAKLYGGR---GQITL*SGPQKNV 340
           WT ++ G     +I++AR LFD MPE++     N +      GR    +      P +NV
Sbjct: 143 WTVMLGGLIHEGRIDEARRLFDMMPEKDVVARTNMIAGYCKEGRLSDAREIFDEMPWRNV 202

Query: 341 VTWTIMLKGYTDRGRIDGAQ 400
           V WT M+ GY    R+D A+
Sbjct: 203 VAWTTMITGYVQNNRVDVAR 222


>XP_019247985.1 PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Nicotiana attenuata] OIT02660.1
           pentatricopeptide repeat-containing protein,
           mitochondrial [Nicotiana attenuata]
          Length = 704

 Score = 88.6 bits (218), Expect = 7e-18
 Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 7/119 (5%)
 Frame = +2

Query: 65  LSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELF 244
           +SD ++ S NSI+A + +N +    Q++FD +P  NI+SW  LI+GY K   +++AR++F
Sbjct: 43  MSDKTVTSWNSIVAGYFQNQQPYEGQRLFDQMPERNIVSWNGLISGYVKNGMVKEARKVF 102

Query: 245 DKMPERNDNRVCAKLYG-------GRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
           DKMP+RN     A + G          +      P+KNVV+WT+ML G    GRID A+
Sbjct: 103 DKMPQRNVISWTAMVRGYVEKGLVEEAETLFWQMPEKNVVSWTVMLGGLIQEGRIDEAR 161



 Score = 68.2 bits (165), Expect = 9e-11
 Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
 Frame = +2

Query: 2   GNLSSYHNNAAPNTYNNSIIALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIIS 181
           G +S Y  N            +   ++ S  +++  +V+   ++ A+ +F  +P  N++S
Sbjct: 84  GLISGYVKNGMVKEARKVFDKMPQRNVISWTAMVRGYVEKGLVEEAETLFWQMPEKNVVS 143

Query: 182 WTTLIAGYTKLRKIEKARELFDKMPERN----DNRVCAKLYGGR---GQITL*SGPQKNV 340
           WT ++ G  +  +I++AR L+D MP ++     + +C      R    +      PQKNV
Sbjct: 144 WTVMLGGLIQEGRIDEARTLYDMMPVKDVVARTSMICGYCQEARLEEARDLFDDMPQKNV 203

Query: 341 VTWTIMLKGYTDRGRIDGAQ 400
           V+WT M+ GY   G++D A+
Sbjct: 204 VSWTAMVSGYAQNGKLDIAR 223



 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 32/110 (29%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
 Frame = +2

Query: 92  NSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN-- 265
           NS +    +  +I  A++VFD + +  + SW +++AGY + ++  + + LFD+MPERN  
Sbjct: 21  NSQICRLARLGQIQNARRVFDEMSDKTVTSWNSIVAGYFQNQQPYEGQRLFDQMPERNIV 80

Query: 266 --DNRVCAKLYGG---RGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
             +  +   +  G     +      PQ+NV++WT M++GY ++G ++ A+
Sbjct: 81  SWNGLISGYVKNGMVKEARKVFDKMPQRNVISWTAMVRGYVEKGLVEEAE 130



 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 19/61 (31%), Positives = 44/61 (72%)
 Frame = +2

Query: 86  SQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN 265
           ++ S++  + +  +++ A+ +FD +P  N++SWT +++GY +  K++ AR+LF+ MP++N
Sbjct: 174 ARTSMICGYCQEARLEEARDLFDDMPQKNVVSWTAMVSGYAQNGKLDIARKLFEVMPDKN 233

Query: 266 D 268
           +
Sbjct: 234 E 234


>XP_009768660.1 PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Nicotiana sylvestris] XP_009768661.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g56690, mitochondrial-like [Nicotiana sylvestris]
          Length = 704

 Score = 88.6 bits (218), Expect = 7e-18
 Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 7/119 (5%)
 Frame = +2

Query: 65  LSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELF 244
           +SD ++ S NSI+A + +N +    Q++FD +P  NI+SW  LI+GY K   +++AR++F
Sbjct: 43  MSDKTVTSWNSIIAGYFQNQQPYEGQRLFDQMPERNIVSWNGLISGYVKNGMVKEARKVF 102

Query: 245 DKMPERNDNRVCAKLYG-------GRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
           DKMP+RN     A + G          +      P+KNVV+WT+ML G    GRID A+
Sbjct: 103 DKMPQRNVISWTAMVRGYVEKGLVEEAETLFWQMPEKNVVSWTVMLGGLIQEGRIDEAR 161



 Score = 67.4 bits (163), Expect = 2e-10
 Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
 Frame = +2

Query: 2   GNLSSYHNNAAPNTYNNSIIALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIIS 181
           G +S Y  N            +   ++ S  +++  +V+   ++ A+ +F  +P  N++S
Sbjct: 84  GLISGYVKNGMVKEARKVFDKMPQRNVISWTAMVRGYVEKGLVEEAETLFWQMPEKNVVS 143

Query: 182 WTTLIAGYTKLRKIEKARELFDKMPERN----DNRVCAKLYGGR---GQITL*SGPQKNV 340
           WT ++ G  +  +I++AR+L+  MP ++     N +C      R    +      PQKNV
Sbjct: 144 WTVMLGGLIQEGRIDEARKLYVMMPVKDVVARTNMICGYCQEARLEEARDLFDDMPQKNV 203

Query: 341 VTWTIMLKGYTDRGRIDGAQ 400
           V+WT M+ GY   G++D A+
Sbjct: 204 VSWTAMVSGYAQNGKLDIAR 223



 Score = 66.6 bits (161), Expect = 3e-10
 Identities = 33/110 (30%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
 Frame = +2

Query: 92  NSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN-- 265
           NS ++   +  +I  A++VFD + +  + SW ++IAGY + ++  + + LFD+MPERN  
Sbjct: 21  NSQISHFARLGQIQNARRVFDEMSDKTVTSWNSIIAGYFQNQQPYEGQRLFDQMPERNIV 80

Query: 266 --DNRVCAKLYGG---RGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
             +  +   +  G     +      PQ+NV++WT M++GY ++G ++ A+
Sbjct: 81  SWNGLISGYVKNGMVKEARKVFDKMPQRNVISWTAMVRGYVEKGLVEEAE 130



 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 18/61 (29%), Positives = 44/61 (72%)
 Frame = +2

Query: 86  SQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN 265
           ++ +++  + +  +++ A+ +FD +P  N++SWT +++GY +  K++ AR+LF+ MP++N
Sbjct: 174 ARTNMICGYCQEARLEEARDLFDDMPQKNVVSWTAMVSGYAQNGKLDIARKLFEVMPDKN 233

Query: 266 D 268
           +
Sbjct: 234 E 234


>OMO80366.1 hypothetical protein COLO4_24134 [Corchorus olitorius]
          Length = 827

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 49/119 (41%), Positives = 70/119 (58%), Gaps = 7/119 (5%)
 Frame = +2

Query: 65  LSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELF 244
           L + ++ S NSI++ +  NNK + A+ +F+ +P  N +SW  LIAGY K   I +ARE+F
Sbjct: 339 LPNKTIDSWNSIISGYFHNNKPNEARLLFNKMPERNTVSWNGLIAGYIKNGMISEAREVF 398

Query: 245 DKMPERNDNRVCAKLYG-------GRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
           +KMPERN     A + G       G  +      P+KNVV+WT+ML G    GRID A+
Sbjct: 399 EKMPERNIVSWTAMVRGYVQEGMIGEAESLFWLMPEKNVVSWTVMLGGLIQEGRIDEAR 457



 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 7/108 (6%)
 Frame = +2

Query: 101 MADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN----D 268
           +A   +  +I+ A++VFD +PN  I SW ++I+GY    K  +AR LF+KMPERN    +
Sbjct: 320 IAQLARVGQIENARKVFDELPNKTIDSWNSIISGYFHNNKPNEARLLFNKMPERNTVSWN 379

Query: 269 NRVCAKLYGG---RGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQA 403
             +   +  G     +      P++N+V+WT M++GY   G I  A++
Sbjct: 380 GLIAGYIKNGMISEAREVFEKMPERNIVSWTAMVRGYVQEGMIGEAES 427



 Score = 68.6 bits (166), Expect = 7e-11
 Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 38/169 (22%)
 Frame = +2

Query: 8   LSSYHNNAAPNTYNNSIIALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWT 187
           +S Y +N  PN        + + +  S N ++A ++KN  I  A++VF+ +P  NI+SWT
Sbjct: 351 ISGYFHNNKPNEARLLFNKMPERNTVSWNGLIAGYIKNGMISEAREVFEKMPERNIVSWT 410

Query: 188 -------------------------------TLIAGYTKLRKIEKARELFDKMPERN--- 265
                                           ++ G  +  +I++AR L+D MPE++   
Sbjct: 411 AMVRGYVQEGMIGEAESLFWLMPEKNVVSWTVMLGGLIQEGRIDEARGLYDMMPEKDVVA 470

Query: 266 -DNRVCAKLYGGR---GQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
             N +      GR    +      PQ+NV++WT M+ GY    R+D A+
Sbjct: 471 RTNMIAGYCKEGRLNEAREIFDEMPQRNVISWTTMITGYAQNNRVDVAR 519



 Score = 68.2 bits (165), Expect = 1e-10
 Identities = 33/104 (31%), Positives = 58/104 (55%)
 Frame = +2

Query: 86  SQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN 265
           ++ +++A + K  +++ A+++FD +P  N+ISWTT+I GY +  +++ AR+LF+ MPE+N
Sbjct: 470 ARTNMIAGYCKEGRLNEAREIFDEMPQRNVISWTTMITGYAQNNRVDVARKLFEVMPEKN 529

Query: 266 DNRVCAKLYGGRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGA 397
           +                        V+ T ML GY   GR+D A
Sbjct: 530 E------------------------VSRTAMLMGYIQSGRLDEA 549


>XP_006428236.1 hypothetical protein CICLE_v10011195mg [Citrus clementina]
           XP_006480704.1 PREDICTED: pentatricopeptide
           repeat-containing protein At1g56690, mitochondrial
           [Citrus sinensis] ESR41476.1 hypothetical protein
           CICLE_v10011195mg [Citrus clementina]
          Length = 703

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 49/119 (41%), Positives = 71/119 (59%), Gaps = 7/119 (5%)
 Frame = +2

Query: 65  LSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELF 244
           L D ++ S NSI+A + +N +  +  Q+FD +P  NIISW  L++GY K   + +AR++F
Sbjct: 42  LRDKNVVSWNSIIAGYFQNKQPIKGHQLFDKMPQRNIISWNNLVSGYVKCGMVSEARKVF 101

Query: 245 DKMPERNDNRVCAKL--YGGRGQIT-----L*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
           D+MPERN     A +  Y   G IT         P+KNVV+WT+ML G+    RID A+
Sbjct: 102 DEMPERNVVSWTAMVRGYVEEGMITEAETLFWQMPEKNVVSWTVMLGGFIRDSRIDDAR 160



 Score = 77.0 bits (188), Expect = 8e-14
 Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
 Frame = +2

Query: 86  SQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN 265
           S NS ++   ++ KI+ A++VFD + + N++SW ++IAGY + ++  K  +LFDKMP+RN
Sbjct: 18  SANSQISRFARSGKIENARKVFDELRDKNVVSWNSIIAGYFQNKQPIKGHQLFDKMPQRN 77

Query: 266 ----DNRVCAKLYGG---RGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
               +N V   +  G     +      P++NVV+WT M++GY + G I  A+
Sbjct: 78  IISWNNLVSGYVKCGMVSEARKVFDEMPERNVVSWTAMVRGYVEEGMITEAE 129



 Score = 73.9 bits (180), Expect = 9e-13
 Identities = 35/104 (33%), Positives = 58/104 (55%)
 Frame = +2

Query: 86  SQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN 265
           +Q +++  + ++ ++D  +++FD +P  N+ISWTT+I+GY    +I+ AR+LF+ MPE+N
Sbjct: 173 AQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVARKLFEVMPEKN 232

Query: 266 DNRVCAKLYGGRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGA 397
           +                        V+WT ML GYT  GRI  A
Sbjct: 233 E------------------------VSWTAMLMGYTQCGRIQDA 252



 Score = 73.6 bits (179), Expect = 1e-12
 Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
 Frame = +2

Query: 86  SQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN 265
           S  +++  +V+   I  A+ +F  +P  N++SWT ++ G+ +  +I+ AR LFD MPE++
Sbjct: 111 SWTAMVRGYVEEGMITEAETLFWQMPEKNVVSWTVMLGGFIRDSRIDDARRLFDMMPEKD 170

Query: 266 ----DNRVCAKLYGGR---GQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
                N V      GR   G+      P+KNV++WT M+ GY +  RID A+
Sbjct: 171 VVAQTNMVLGYCQDGRVDEGREIFDEMPKKNVISWTTMISGYVNNNRIDVAR 222


>XP_012835298.1 PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Erythranthe guttata]
          Length = 709

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 46/117 (39%), Positives = 68/117 (58%), Gaps = 7/117 (5%)
 Frame = +2

Query: 71  DDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDK 250
           D +  S NSI++ + +NN+ + AQ +FD +P  N +SW  LI+GY K   I+KAR++FD 
Sbjct: 50  DKTTSSWNSIISGYFQNNQPNEAQHLFDEMPQRNTVSWNGLISGYVKNGMIKKARQVFDL 109

Query: 251 MPERNDNRVCAKLYG-------GRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
           MPERN     + + G          +      P+KNV++WT+ML G    GRID A+
Sbjct: 110 MPERNVISWTSMVRGYVEERMISEAEALFRRMPEKNVISWTVMLGGLIHEGRIDDAR 166



 Score = 73.6 bits (179), Expect = 1e-12
 Identities = 37/104 (35%), Positives = 58/104 (55%)
 Frame = +2

Query: 86  SQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN 265
           ++ S++     N +++ A+++FDS+P  N +SWTT+I+GY +  K++ AR+LF+ MPERN
Sbjct: 179 TRTSMIGGLCSNGRLEEAREIFDSMPQRNAVSWTTMISGYAQNGKVDVARKLFEVMPERN 238

Query: 266 DNRVCAKLYGGRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGA 397
           +                        VTWT ML GYT  GR + A
Sbjct: 239 E------------------------VTWTAMLMGYTRCGRTEDA 258



 Score = 67.8 bits (164), Expect = 1e-10
 Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 39/170 (22%)
 Frame = +2

Query: 8   LSSYHNNAAPNTYNNSIIALSDDSLRSQNSIMADHVKNNKIDRAQQVFD----------- 154
           +S Y  N  PN   +    +   +  S N +++ +VKN  I +A+QVFD           
Sbjct: 60  ISGYFQNNQPNEAQHLFDEMPQRNTVSWNGLISGYVKNGMIKKARQVFDLMPERNVISWT 119

Query: 155 --------------------SIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERNDNR 274
                                +P  N+ISWT ++ G     +I+ AR L+D MP + D  
Sbjct: 120 SMVRGYVEERMISEAEALFRRMPEKNVISWTVMLGGLIHEGRIDDARRLYDLMPVK-DVV 178

Query: 275 VCAKLYGG--------RGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
               + GG          +    S PQ+N V+WT M+ GY   G++D A+
Sbjct: 179 TRTSMIGGLCSNGRLEEAREIFDSMPQRNAVSWTTMISGYAQNGKVDVAR 228



 Score = 63.2 bits (152), Expect = 5e-09
 Identities = 33/111 (29%), Positives = 65/111 (58%), Gaps = 7/111 (6%)
 Frame = +2

Query: 92  NSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN-- 265
           +S +A +V+  +I+ A+++FD  P+    SW ++I+GY +  +  +A+ LFD+MP+RN  
Sbjct: 26  SSQIAYYVRLGQIETARKLFDQTPDKTTSSWNSIISGYFQNNQPNEAQHLFDEMPQRNTV 85

Query: 266 --DNRVCAKLYGG---RGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQA 403
             +  +   +  G   + +      P++NV++WT M++GY +   I  A+A
Sbjct: 86  SWNGLISGYVKNGMIKKARQVFDLMPERNVISWTSMVRGYVEERMISEAEA 136


>XP_006382303.1 hypothetical protein POPTR_0005s00800g [Populus trichocarpa]
           ERP60100.1 hypothetical protein POPTR_0005s00800g
           [Populus trichocarpa]
          Length = 619

 Score = 86.7 bits (213), Expect = 3e-17
 Identities = 45/119 (37%), Positives = 71/119 (59%), Gaps = 7/119 (5%)
 Frame = +2

Query: 65  LSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELF 244
           L D ++ S N+IMA + +N +   A+++FD +P  N ISW  L++GY +   I +AR++F
Sbjct: 40  LQDKTVTSWNAIMAGYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVF 99

Query: 245 DKMPERNDNRVCAKLYG-------GRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
           DKMPERN     A + G          ++     P++NVV+WT+ML G  + GR+D A+
Sbjct: 100 DKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEAR 158



 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
 Frame = +2

Query: 41  TYNNSIIALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRK 220
           TY+++  A+S  S  S         +  +I  A+++FD + +  + SW  ++AGY + ++
Sbjct: 10  TYSSTFAAVSQISHFS---------RLGQIRIARKIFDDLQDKTVTSWNAIMAGYFQNKR 60

Query: 221 IEKARELFDKMPERN----DNRVCAKLYGG---RGQITL*SGPQKNVVTWTIMLKGYTDR 379
             +AR+LFDKMPE N    +  V   +  G     +      P++NVV+WT M++GY   
Sbjct: 61  PREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQE 120

Query: 380 GRIDGAQ 400
           G I+ A+
Sbjct: 121 GLIEEAE 127



 Score = 60.5 bits (145), Expect = 5e-08
 Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
 Frame = +2

Query: 2   GNLSSYHNNAAPNTYNNSIIALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIIS 181
           G +S Y  N   +        + + ++ S  +++  +V+   I+ A+ +F  +P  N++S
Sbjct: 81  GLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERNVVS 140

Query: 182 WTTLIAGYTKLRKIEKARELFDKMPER----NDNRVCAKLYGGR---GQITL*SGPQKNV 340
           WT ++ G  +  ++++AR+LFD MP +    + N +      GR    +      PQ+NV
Sbjct: 141 WTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNV 200

Query: 341 VTWTIMLKGYTDRG 382
           V WT M+ G  D G
Sbjct: 201 VAWTSMISGEKDDG 214


>XP_009407923.2 PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Musa acuminata subsp. malaccensis]
          Length = 680

 Score = 86.7 bits (213), Expect = 3e-17
 Identities = 43/111 (38%), Positives = 71/111 (63%), Gaps = 7/111 (6%)
 Frame = +2

Query: 89  QNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERND 268
           +++++  + K  ++D AQ+VFD++  PN++SWT+L++GY  + +IE+AR +FD+MP RN 
Sbjct: 143 ESAMIDGYAKAGRVDEAQRVFDAMAAPNVVSWTSLLSGYCLVGRIEEARRIFDRMPVRNV 202

Query: 269 NRVCAKL--YGGRGQIT-----L*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
               A +  Y   G +T         P+KNVV+WT M+KG  + GRI  A+
Sbjct: 203 VSWTAMVLGYARNGSLTDARELFDQMPEKNVVSWTAMIKGCVEHGRITDAR 253



 Score = 70.9 bits (172), Expect = 1e-11
 Identities = 37/110 (33%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
 Frame = +2

Query: 62  ALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKAREL 241
           A++  ++ S  S+++ +    +I+ A+++FD +P  N++SWT ++ GY +   +  AREL
Sbjct: 165 AMAAPNVVSWTSLLSGYCLVGRIEEARRIFDRMPVRNVVSWTAMVLGYARNGSLTDAREL 224

Query: 242 FDKMPERNDNRVCAKLYG--GRGQIT-----L*SGPQKNVVTWTIMLKGY 370
           FD+MPE+N     A + G    G+IT       S P +N+  W IM+ GY
Sbjct: 225 FDQMPEKNVVSWTAMIKGCVEHGRITDARELFDSMPNRNLYAWNIMISGY 274



 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 34/119 (28%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
 Frame = +2

Query: 62  ALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKAREL 241
           ++ + +L + N +++ ++ + +   A  +F S+P+ N +SWT ++ G  +    E+AR+ 
Sbjct: 258 SMPNRNLYAWNIMISGYLGDRRASEAIGLFQSMPHRNAVSWTIMVTGLARNGLTEEARQY 317

Query: 242 FDKMPERNDNRVCAKL--YGGRGQIT-----L*SGPQKNVVTWTIMLKGYTDRGRIDGA 397
           F++MP R+     A +  Y   G ++       S P+K+VVTW  M+ GY  +G  D A
Sbjct: 318 FEQMPARDIAAWNAMITAYADEGLMSDARALFDSMPKKDVVTWNAMIDGYAKKGCRDEA 376



 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
 Frame = +2

Query: 65  LSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELF 244
           + + ++ S  +++   V++ +I  A+++FDS+PN N+ +W  +I+GY   R+  +A  LF
Sbjct: 228 MPEKNVVSWTAMIKGCVEHGRITDARELFDSMPNRNLYAWNIMISGYLGDRRASEAIGLF 287

Query: 245 DKMPERNDNRVCAKLYG-GRGQIT------L*SGPQKNVVTWTIMLKGYTDRGRIDGAQA 403
             MP RN       + G  R  +T          P +++  W  M+  Y D G +  A+A
Sbjct: 288 QSMPHRNAVSWTIMVTGLARNGLTEEARQYFEQMPARDIAAWNAMITAYADEGLMSDARA 347



 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
 Frame = +2

Query: 80  LRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPE 259
           LRS N ++ D  +   +D A+ +FD +P  ++++ TT+I  + K  ++ +A  LF  +P 
Sbjct: 78  LRSCNQMLFDVGRTRGVDEARALFDRMPRRDLVTHTTMITLFLKDGRLPQAEALFRLLPH 137

Query: 260 RNDNRVCAKLYG----GR---GQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
           RN     A + G    GR    Q    +    NVV+WT +L GY   GRI+ A+
Sbjct: 138 RNVVVESAMIDGYAKAGRVDEAQRVFDAMAAPNVVSWTSLLSGYCLVGRIEEAR 191


>XP_015874755.1 PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Ziziphus jujuba]
          Length = 703

 Score = 86.7 bits (213), Expect = 3e-17
 Identities = 47/119 (39%), Positives = 72/119 (60%), Gaps = 7/119 (5%)
 Frame = +2

Query: 65  LSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELF 244
           + D ++ S NSI+A + +NN+   AQ++FD +P  N +SW  LI+GY K   + +AR++F
Sbjct: 42  MPDKTIVSWNSIIAGYFQNNQPREAQKLFDRMPERNTVSWNGLISGYIKNGMVNEARKVF 101

Query: 245 DKMPERNDNRVCAKLYGGRGQITL*SG-------PQKNVVTWTIMLKGYTDRGRIDGAQ 400
           D MP+RN     A + G   + T+          P+KNVV+WT+ML G  + GRID A+
Sbjct: 102 DSMPKRNVVSWTAMVRGYVQEGTISEAESLFWQMPEKNVVSWTVMLNGLIEDGRIDEAR 160



 Score = 74.3 bits (181), Expect = 7e-13
 Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 8/141 (5%)
 Frame = +2

Query: 2   GNLSSYHNNAAPNTYNNSIIALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIIS 181
           G +S Y  N   N       ++   ++ S  +++  +V+   I  A+ +F  +P  N++S
Sbjct: 83  GLISGYIKNGMVNEARKVFDSMPKRNVVSWTAMVRGYVQEGTISEAESLFWQMPEKNVVS 142

Query: 182 WTTLIAGYTKLRKIEKARELFDKMPERNDNRVCAKLYGG--------RGQITL*SGPQKN 337
           WT ++ G  +  +I++AR LFDKMPE+ D      + GG          +      P++N
Sbjct: 143 WTVMLNGLIEDGRIDEARRLFDKMPEK-DVVARTSMIGGYCQDGRLAEARELFDEMPRRN 201

Query: 338 VVTWTIMLKGYTDRGRIDGAQ 400
           V++WT M+ GY   GR+D A+
Sbjct: 202 VISWTAMISGYAHNGRVDVAR 222



 Score = 73.6 bits (179), Expect = 1e-12
 Identities = 39/113 (34%), Positives = 67/113 (59%), Gaps = 7/113 (6%)
 Frame = +2

Query: 86  SQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN 265
           S  S++A   +  +I  A++VFD +P+  I+SW ++IAGY +  +  +A++LFD+MPERN
Sbjct: 18  SNTSLIARFSRVGQIYNARRVFDHMPDKTIVSWNSIIAGYFQNNQPREAQKLFDRMPERN 77

Query: 266 ----DNRVCAKLYGG---RGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQA 403
               +  +   +  G     +    S P++NVV+WT M++GY   G I  A++
Sbjct: 78  TVSWNGLISGYIKNGMVNEARKVFDSMPKRNVVSWTAMVRGYVQEGTISEAES 130



 Score = 67.8 bits (164), Expect = 1e-10
 Identities = 33/104 (31%), Positives = 58/104 (55%)
 Frame = +2

Query: 86  SQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN 265
           ++ S++  + ++ ++  A+++FD +P  N+ISWT +I+GY    +++ AR+LF+ MPE+N
Sbjct: 173 ARTSMIGGYCQDGRLAEARELFDEMPRRNVISWTAMISGYAHNGRVDVARKLFEVMPEKN 232

Query: 266 DNRVCAKLYGGRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGA 397
           +                        V+WT ML GYT  GRI+ A
Sbjct: 233 E------------------------VSWTAMLMGYTQCGRIEEA 252


>XP_011023834.1 PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Populus euphratica]
          Length = 703

 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 7/119 (5%)
 Frame = +2

Query: 65  LSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELF 244
           L   ++ S N+I+A +  N +   AQ++FD +P  N ISW  L++GY K   I +AR++F
Sbjct: 42  LQSKTVTSWNAIVAGYFHNKRPGEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVF 101

Query: 245 DKMPERNDNRVCAKLYG-------GRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
           DKMPERN     A + G          ++     P+KNVV+WT+ML G  + GR+D A+
Sbjct: 102 DKMPERNVVSWTAMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEAR 160



 Score = 70.9 bits (172), Expect = 1e-11
 Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
 Frame = +2

Query: 125 KIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN----DNRVCAKLY 292
           +IDRA+ +FD + +  + SW  ++AGY   ++  +A++LFDKMPERN    +  V   + 
Sbjct: 31  QIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPGEAQKLFDKMPERNTISWNGLVSGYVK 90

Query: 293 GG---RGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
            G     +      P++NVV+WT M++GY   G ID A+
Sbjct: 91  NGMISEARKVFDKMPERNVVSWTAMVRGYVQEGLIDEAE 129



 Score = 68.6 bits (166), Expect = 7e-11
 Identities = 32/91 (35%), Positives = 52/91 (57%)
 Frame = +2

Query: 125 KIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERNDNRVCAKLYGGRG 304
           ++  A+++FD +P  N+++WT++I+GY    K++ AR+LF+ MP++N+            
Sbjct: 186 RLSEAREIFDEMPRRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNE------------ 233

Query: 305 QITL*SGPQKNVVTWTIMLKGYTDRGRIDGA 397
                       VTWT MLKGYT  GRI+ A
Sbjct: 234 ------------VTWTAMLKGYTRSGRINEA 252



 Score = 63.5 bits (153), Expect = 4e-09
 Identities = 37/141 (26%), Positives = 72/141 (51%), Gaps = 8/141 (5%)
 Frame = +2

Query: 2   GNLSSYHNNAAPNTYNNSIIALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIIS 181
           G +S Y  N   +        + + ++ S  +++  +V+   ID A+ +F  +P  N++S
Sbjct: 83  GLVSGYVKNGMISEARKVFDKMPERNVVSWTAMVRGYVQEGLIDEAELLFWRMPEKNVVS 142

Query: 182 WTTLIAGYTKLRKIEKARELFDKMPERNDNRVCAKLYGG---RGQIT-----L*SGPQKN 337
           WT ++ G  +  ++++AR LFD +P + D      + GG    G+++         P++N
Sbjct: 143 WTVMLGGLIEDGRVDEARRLFDMIPVK-DVVASTNMIGGLCSEGRLSEAREIFDEMPRRN 201

Query: 338 VVTWTIMLKGYTDRGRIDGAQ 400
           VV WT M+ GY    ++D A+
Sbjct: 202 VVAWTSMISGYAMNNKVDVAR 222



 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 31/103 (30%), Positives = 60/103 (58%), Gaps = 7/103 (6%)
 Frame = +2

Query: 95  SIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPER---- 262
           S+++ +  NNK+D A+++F+ +P+ N ++WT ++ GYT+  +I +A ELF  MP +    
Sbjct: 207 SMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAA 266

Query: 263 -NDNRVCAKLYG--GRGQITL*SGPQKNVVTWTIMLKGYTDRG 382
            N+  +   L G  G+ +       +K+  TW+ ++K Y  +G
Sbjct: 267 CNEMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKG 309


>XP_017977106.1 PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial [Theobroma cacao]
          Length = 730

 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 47/119 (39%), Positives = 70/119 (58%), Gaps = 7/119 (5%)
 Frame = +2

Query: 65  LSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELF 244
           L + ++ + NSI+A + +NN+ + AQ +F+ +P  N +SW  LIAGY K   + +AR++F
Sbjct: 70  LPNKTIDTWNSIIAGYFQNNQPNEAQLLFNKMPEKNTVSWNNLIAGYVKNGMVSEARKVF 129

Query: 245 DKMPERNDNRVCAKLYG-------GRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
           DKMPERN     A + G          +      P+KNVV+WT+ML G    GRID A+
Sbjct: 130 DKMPERNVVSWTAMVRGYVQEGMMCEAESLFWLMPEKNVVSWTVMLGGLIQEGRIDEAR 188



 Score = 70.5 bits (171), Expect = 1e-11
 Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 15/110 (13%)
 Frame = +2

Query: 113 VKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN--------- 265
           ++  +ID A++++D IP  ++++ T +IAGY K   + +ARE+FD+MP RN         
Sbjct: 179 IQEGRIDEARRLYDMIPEKDVVARTNMIAGYCKDGHLSEAREIFDEMPRRNVISWTIMIT 238

Query: 266 ----DNRV--CAKLYGGRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGA 397
               +NRV    KL+           P+KN V+WT ML GYT  GR++ A
Sbjct: 239 GYAQNNRVDIARKLFEVM--------PEKNEVSWTAMLMGYTQCGRLEAA 280



 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 38/169 (22%)
 Frame = +2

Query: 8   LSSYHNNAAPNTYNNSIIALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPN------- 166
           ++ Y  N  PN        + + +  S N+++A +VKN  +  A++VFD +P        
Sbjct: 82  IAGYFQNNQPNEAQLLFNKMPEKNTVSWNNLIAGYVKNGMVSEARKVFDKMPERNVVSWT 141

Query: 167 ------------------------PNIISWTTLIAGYTKLRKIEKARELFDKMPERN--- 265
                                    N++SWT ++ G  +  +I++AR L+D +PE++   
Sbjct: 142 AMVRGYVQEGMMCEAESLFWLMPEKNVVSWTVMLGGLIQEGRIDEARRLYDMIPEKDVVA 201

Query: 266 -DNRV---CAKLYGGRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
             N +   C   +    +      P++NV++WTIM+ GY    R+D A+
Sbjct: 202 RTNMIAGYCKDGHLSEAREIFDEMPRRNVISWTIMITGYAQNNRVDIAR 250



 Score = 66.6 bits (161), Expect = 3e-10
 Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
 Frame = +2

Query: 50  NSIIALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEK 229
           N+  A S        S +A   +  +I  A++VFD +PN  I +W ++IAGY +  +  +
Sbjct: 34  NTCRAYSTSCTVVPRSRIAQFARVGQIQIARKVFDELPNKTIDTWNSIIAGYFQNNQPNE 93

Query: 230 ARELFDKMPERN----DNRVCAKLYGG---RGQITL*SGPQKNVVTWTIMLKGYTDRGRI 388
           A+ LF+KMPE+N    +N +   +  G     +      P++NVV+WT M++GY   G +
Sbjct: 94  AQLLFNKMPEKNTVSWNNLIAGYVKNGMVSEARKVFDKMPERNVVSWTAMVRGYVQEGMM 153

Query: 389 DGAQA 403
             A++
Sbjct: 154 CEAES 158


>EOY11720.1 Pentatricopeptide repeat (PPR) superfamily protein isoform 1
           [Theobroma cacao] EOY11721.1 Pentatricopeptide repeat
           (PPR) superfamily protein isoform 1 [Theobroma cacao]
          Length = 731

 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 47/119 (39%), Positives = 70/119 (58%), Gaps = 7/119 (5%)
 Frame = +2

Query: 65  LSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELF 244
           L + ++ + NSI+A + +NN+ + AQ +F+ +P  N +SW  LIAGY K   + +AR++F
Sbjct: 70  LPNKTIDTWNSIIAGYFQNNQPNEAQLLFNKMPEKNTVSWNNLIAGYVKNGMVSEARKVF 129

Query: 245 DKMPERNDNRVCAKLYG-------GRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
           DKMPERN     A + G          +      P+KNVV+WT+ML G    GRID A+
Sbjct: 130 DKMPERNVVSWTAMVRGYVQEGMMCEAESLFWLMPEKNVVSWTVMLGGLIQEGRIDEAR 188



 Score = 70.5 bits (171), Expect = 1e-11
 Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 15/110 (13%)
 Frame = +2

Query: 113 VKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN--------- 265
           ++  +ID A++++D IP  ++++ T +IAGY K   + +ARE+FD+MP RN         
Sbjct: 179 IQEGRIDEARRLYDMIPEKDVVARTNMIAGYCKDGHLSEAREIFDEMPRRNVISWTIMIT 238

Query: 266 ----DNRV--CAKLYGGRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGA 397
               +NRV    KL+           P+KN V+WT ML GYT  GR++ A
Sbjct: 239 GYAQNNRVDIARKLFEVM--------PEKNEVSWTAMLMGYTQCGRLEAA 280



 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 38/169 (22%)
 Frame = +2

Query: 8   LSSYHNNAAPNTYNNSIIALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPN------- 166
           ++ Y  N  PN        + + +  S N+++A +VKN  +  A++VFD +P        
Sbjct: 82  IAGYFQNNQPNEAQLLFNKMPEKNTVSWNNLIAGYVKNGMVSEARKVFDKMPERNVVSWT 141

Query: 167 ------------------------PNIISWTTLIAGYTKLRKIEKARELFDKMPERN--- 265
                                    N++SWT ++ G  +  +I++AR L+D +PE++   
Sbjct: 142 AMVRGYVQEGMMCEAESLFWLMPEKNVVSWTVMLGGLIQEGRIDEARRLYDMIPEKDVVA 201

Query: 266 -DNRV---CAKLYGGRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
             N +   C   +    +      P++NV++WTIM+ GY    R+D A+
Sbjct: 202 RTNMIAGYCKDGHLSEAREIFDEMPRRNVISWTIMITGYAQNNRVDIAR 250



 Score = 66.6 bits (161), Expect = 3e-10
 Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
 Frame = +2

Query: 50  NSIIALSDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEK 229
           N+  A S        S +A   +  +I  A++VFD +PN  I +W ++IAGY +  +  +
Sbjct: 34  NTCRAYSTSCTVVPRSRIAQFARVGQIQIARKVFDELPNKTIDTWNSIIAGYFQNNQPNE 93

Query: 230 ARELFDKMPERN----DNRVCAKLYGG---RGQITL*SGPQKNVVTWTIMLKGYTDRGRI 388
           A+ LF+KMPE+N    +N +   +  G     +      P++NVV+WT M++GY   G +
Sbjct: 94  AQLLFNKMPEKNTVSWNNLIAGYVKNGMVSEARKVFDKMPERNVVSWTAMVRGYVQEGMM 153

Query: 389 DGAQA 403
             A++
Sbjct: 154 CEAES 158


>KRH76357.1 hypothetical protein GLYMA_01G147900 [Glycine max]
          Length = 626

 Score = 85.9 bits (211), Expect = 6e-17
 Identities = 41/115 (35%), Positives = 73/115 (63%), Gaps = 7/115 (6%)
 Frame = +2

Query: 77  SLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMP 256
           +L S N++++ ++++  +D A + FD++P  N++SWT L+ G++   +IE A+++FD+MP
Sbjct: 107 NLVSYNAMLSAYLRSGMLDEASRFFDTMPERNVVSWTALLGGFSDAGRIEDAKKVFDEMP 166

Query: 257 ERN----DNRVCAKLYGG---RGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
           +RN    +  V A +  G     +I     P KNVV+W  M+ GY +RGR+D A+
Sbjct: 167 QRNVVSWNAMVVALVRNGDLEEARIVFEETPYKNVVSWNAMIAGYVERGRMDEAR 221



 Score = 67.4 bits (163), Expect = 2e-10
 Identities = 35/104 (33%), Positives = 55/104 (52%)
 Frame = +2

Query: 86  SQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN 265
           S N+++   V+N  ++ A+ VF+  P  N++SW  +IAGY +  ++++ARELF+KM  R 
Sbjct: 172 SWNAMVVALVRNGDLEEARIVFEETPYKNVVSWNAMIAGYVERGRMDEARELFEKMEFR- 230

Query: 266 DNRVCAKLYGGRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGA 397
                                  NVVTWT M+ GY   G ++GA
Sbjct: 231 -----------------------NVVTWTSMISGYCREGNLEGA 251


>XP_002466087.1 hypothetical protein SORBIDRAFT_01g000980 [Sorghum bicolor]
          Length = 666

 Score = 85.9 bits (211), Expect = 6e-17
 Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
 Frame = +2

Query: 98  IMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERNDN-- 271
           ++  + K  ++DRA+++FD +P  N+++WT +++GY +  ++ +ARELFD MP+RND   
Sbjct: 156 MLGGYAKAGRVDRARELFDGMPVKNVVTWTAMVSGYFRAGRVREARELFDVMPDRNDYSW 215

Query: 272 RVCAKLYGGRGQI-----TL*SGPQKNVVTWTIMLKGYTDRGRIDGA 397
               + Y   G +     T    PQ+NVV WT M+K Y D G+I  A
Sbjct: 216 TTVVQGYTSNGMLMEARETFDRMPQRNVVAWTAMVKAYVDSGQIQDA 262



 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
 Frame = +2

Query: 86  SQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN 265
           S  +++  +  N  +  A++ FD +P  N+++WT ++  Y    +I+ A ELFD MPERN
Sbjct: 214 SWTTVVQGYTSNGMLMEARETFDRMPQRNVVAWTAMVKAYVDSGQIQDAWELFDMMPERN 273

Query: 266 DNRVCAKLYGGRGQITL*SGPQ---------KNVVTWTIMLKGYTDRG 382
                A + G      +    Q         +NVV+WT M+ G    G
Sbjct: 274 SYSWNAMISGFLSIGEVAEAVQLFERMPHRLRNVVSWTTMVTGLARNG 321


>KXG37111.1 hypothetical protein SORBI_001G010000 [Sorghum bicolor]
          Length = 729

 Score = 85.9 bits (211), Expect = 6e-17
 Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
 Frame = +2

Query: 98  IMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERNDN-- 271
           ++  + K  ++DRA+++FD +P  N+++WT +++GY +  ++ +ARELFD MP+RND   
Sbjct: 156 MLGGYAKAGRVDRARELFDGMPVKNVVTWTAMVSGYFRAGRVREARELFDVMPDRNDYSW 215

Query: 272 RVCAKLYGGRGQI-----TL*SGPQKNVVTWTIMLKGYTDRGRIDGA 397
               + Y   G +     T    PQ+NVV WT M+K Y D G+I  A
Sbjct: 216 TTVVQGYTSNGMLMEARETFDRMPQRNVVAWTAMVKAYVDSGQIQDA 262



 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
 Frame = +2

Query: 86  SQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN 265
           S  +++  +  N  +  A++ FD +P  N+++WT ++  Y    +I+ A ELFD MPERN
Sbjct: 214 SWTTVVQGYTSNGMLMEARETFDRMPQRNVVAWTAMVKAYVDSGQIQDAWELFDMMPERN 273

Query: 266 DNRVCAKLYGGRGQITL*SGPQ---------KNVVTWTIMLKGYTDRG 382
                A + G      +    Q         +NVV+WT M+ G    G
Sbjct: 274 SYSWNAMISGFLSIGEVAEAVQLFERMPHRLRNVVSWTTMVTGLARNG 321


>KHN41721.1 Pentatricopeptide repeat-containing protein, mitochondrial [Glycine
           soja]
          Length = 737

 Score = 85.9 bits (211), Expect = 6e-17
 Identities = 41/115 (35%), Positives = 73/115 (63%), Gaps = 7/115 (6%)
 Frame = +2

Query: 77  SLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMP 256
           +L S N++++ ++++  +D A + FD++P  N++SWT L+ G++   +IE A+++FD+MP
Sbjct: 115 NLVSYNAMLSAYLRSGMLDEASRFFDTMPERNVVSWTALLGGFSDAGRIEDAKKVFDEMP 174

Query: 257 ERN----DNRVCAKLYGG---RGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGAQ 400
           +RN    +  V A +  G     +I     P KNVV+W  M+ GY +RGR+D A+
Sbjct: 175 QRNVVSWNAMVVALVRNGDLEEARIVFEETPYKNVVSWNAMIAGYVERGRMDEAR 229



 Score = 67.4 bits (163), Expect = 2e-10
 Identities = 35/104 (33%), Positives = 55/104 (52%)
 Frame = +2

Query: 86  SQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN 265
           S N+++   V+N  ++ A+ VF+  P  N++SW  +IAGY +  ++++ARELF+KM  R 
Sbjct: 180 SWNAMVVALVRNGDLEEARIVFEETPYKNVVSWNAMIAGYVERGRMDEARELFEKMEFR- 238

Query: 266 DNRVCAKLYGGRGQITL*SGPQKNVVTWTIMLKGYTDRGRIDGA 397
                                  NVVTWT M+ GY   G ++GA
Sbjct: 239 -----------------------NVVTWTSMISGYCREGNLEGA 259


>XP_011465325.1 PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 260

 Score = 83.2 bits (204), Expect = 1e-16
 Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
 Frame = +2

Query: 86  SQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN 265
           S NS++A  ++N  +D A   F ++P  NI SW  +I+G+ +  ++E+A +LF++MP RN
Sbjct: 93  SWNSMVAGCIENGMVDEAFDYFRAMPERNIASWNAMISGFLRCGRVEEASKLFEEMPRRN 152

Query: 266 DNRVCAKL--YGGRGQITL*SG-----PQKNVVTWTIMLKGYTDRGRIDGAQ 400
                A +  YG RG++    G     P +N+V+WT+M+ GY + GR D A+
Sbjct: 153 VVSYTAMIDGYGKRGEMEKARGLFDVMPSRNMVSWTVMISGYVENGRFDEAR 204



 Score = 60.1 bits (144), Expect = 4e-08
 Identities = 32/117 (27%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
 Frame = +2

Query: 68  SDDSLRSQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFD 247
           S   + S+N  +    +  +I+ A+QVFD +P  ++++W +LI GY K    +++++LF+
Sbjct: 25  STHDVYSRNLKIGSLFRAGQIEAARQVFDEMPQRDVVTWNSLITGYWKNGYFQESKQLFE 84

Query: 248 KMPERN----DNRVCAKLYGGRGQIT---L*SGPQKNVVTWTIMLKGYTDRGRIDGA 397
            MP RN    ++ V   +  G          + P++N+ +W  M+ G+   GR++ A
Sbjct: 85  SMPLRNVVSWNSMVAGCIENGMVDEAFDYFRAMPERNIASWNAMISGFLRCGRVEEA 141



 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 24/70 (34%), Positives = 48/70 (68%)
 Frame = +2

Query: 86  SQNSIMADHVKNNKIDRAQQVFDSIPNPNIISWTTLIAGYTKLRKIEKARELFDKMPERN 265
           S  +++  + K  ++++A+ +FD +P+ N++SWT +I+GY +  + ++AREL+ +MPE+N
Sbjct: 155 SYTAMIDGYGKRGEMEKARGLFDVMPSRNMVSWTVMISGYVENGRFDEARELYKQMPEKN 214

Query: 266 DNRVCAKLYG 295
              V A + G
Sbjct: 215 VVAVTAMITG 224