BLASTX nr result

ID: Ephedra29_contig00018461 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00018461
         (343 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ACN39861.1 unknown [Picea sitchensis]                                  55   1e-06

>ACN39861.1 unknown [Picea sitchensis]
          Length = 1011

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
 Frame = -2

Query: 339 VAKLCHGVPLLLILVGKDLNLYKEKDHYDFTL---KNLKDADFTSYKSATLTEFFSSIFK 169
           + K C G+PL+L LV + L   K+K+  D  L   + LK  DF   K     E +   + 
Sbjct: 491 IIKKCGGIPLMLKLVARALRFAKDKEEVDQVLDELEKLKGEDFGRDK----IESYLFAYD 546

Query: 168 QLDVDVQNAFLDICTFFINREWCRVRAIVGKKVMDKLK*KHLVQIDDCSCVSVHAI 1
           +L  D ++ FLDIC++F   +W  V  I+G + +  L  + L+  +    +SVH +
Sbjct: 547 KLPEDCKDPFLDICSYFEGWDWEIVANIMGGRELKMLADRALITKNTNGVISVHDV 602


Top