BLASTX nr result
ID: Ephedra29_contig00018368
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00018368
(716 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_011625384.1 PREDICTED: probable RNA-dependent RNA polymerase ... 153 5e-39
ERN11375.1 hypothetical protein AMTR_s00176p00039530 [Amborella ... 153 5e-39
KDO60785.1 hypothetical protein CISIN_1g0025862mg [Citrus sinens... 152 6e-39
XP_006469265.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform... 152 1e-38
XP_015382841.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform... 152 1e-38
NP_001267692.1 RNA-dependent RNA polymerase 1-like [Cucumis sati... 152 2e-38
KGN50761.1 hypothetical protein Csa_5G239140 [Cucumis sativus] 152 2e-38
XP_002311536.1 RNA-directed RNA Polymerase family protein [Popul... 151 3e-38
AJA90778.1 RNA-dependent RNA polymerase 2 [Ginkgo biloba] 150 5e-38
JAU50428.1 RNA-dependent RNA polymerase 1 [Noccaea caerulescens] 150 8e-38
JAU85434.1 RNA-dependent RNA polymerase 1 [Noccaea caerulescens] 149 1e-37
JAU76270.1 RNA-dependent RNA polymerase 1 [Noccaea caerulescens] 149 2e-37
XP_006416969.1 hypothetical protein EUTSA_v10006629mg [Eutrema s... 148 4e-37
XP_010088177.1 RNA-dependent RNA polymerase 1 [Morus notabilis] ... 147 5e-37
JAU07878.1 RNA-dependent RNA polymerase 1 [Noccaea caerulescens] 147 7e-37
BAT98859.1 hypothetical protein VIGAN_10021400 [Vigna angularis ... 147 7e-37
XP_017427470.1 PREDICTED: probable RNA-dependent RNA polymerase ... 147 7e-37
XP_010476552.1 PREDICTED: RNA-dependent RNA polymerase 1-like [C... 147 1e-36
NP_001315397.1 RNA-dependent RNA polymerase 1 [Cucumis melo] ALM... 147 1e-36
XP_008465250.1 PREDICTED: RNA-dependent RNA polymerase 1 [Cucumi... 147 1e-36
>XP_011625384.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Amborella
trichopoda]
Length = 1140
Score = 153 bits (387), Expect = 5e-39
Identities = 95/234 (40%), Positives = 129/234 (55%), Gaps = 3/234 (1%)
Frame = +1
Query: 1 PSVFYKEDS-SSSADDAQGLEYYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDK 177
P +F K S SS D+ YYK D W+R+ DFT + IGQ SS+C+ LPNG +
Sbjct: 183 PRIFQKPLSFSSDIYDSPLFNYYKDFPDEQWVRSIDFTPSCSIGQSSSLCLALPNGTRIP 242
Query: 178 DIKGTFYNYKVIKDDLSLQMPFFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVLN 357
+I+ F YK I +L+ + LV Y+IL+ VN LVQ G L
Sbjct: 243 NIRENFAYYKEIGGAFNLKTGSSFSHSLHLVPIVHPPDQIKLPYKILFRVNSLVQNGFLV 302
Query: 358 WPTLKRDFFSLLQPTREKPVHCILSALDEMYYSSPCFNPEKILKKSIHA-RNTRRYADPN 534
PTL +F++LL V L + + ++ C P K L++ RN R P
Sbjct: 303 GPTLDTEFYNLLNGLPSPFVERSLEDISRL--TNCCLEPAKWLQEQYKKYRNLPRRPSPA 360
Query: 535 SY-LDGGLVRIHRAQVTPTKIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
+ L+ GLV +HR QVTP+K+Y PEVNVSNRV+RQFS Y+D+FLR+SF+DED
Sbjct: 361 AISLEPGLVYVHRVQVTPSKVYFYGPEVNVSNRVLRQFSNYIDNFLRISFIDED 414
>ERN11375.1 hypothetical protein AMTR_s00176p00039530 [Amborella trichopoda]
Length = 1210
Score = 153 bits (387), Expect = 5e-39
Identities = 95/234 (40%), Positives = 129/234 (55%), Gaps = 3/234 (1%)
Frame = +1
Query: 1 PSVFYKEDS-SSSADDAQGLEYYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDK 177
P +F K S SS D+ YYK D W+R+ DFT + IGQ SS+C+ LPNG +
Sbjct: 253 PRIFQKPLSFSSDIYDSPLFNYYKDFPDEQWVRSIDFTPSCSIGQSSSLCLALPNGTRIP 312
Query: 178 DIKGTFYNYKVIKDDLSLQMPFFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVLN 357
+I+ F YK I +L+ + LV Y+IL+ VN LVQ G L
Sbjct: 313 NIRENFAYYKEIGGAFNLKTGSSFSHSLHLVPIVHPPDQIKLPYKILFRVNSLVQNGFLV 372
Query: 358 WPTLKRDFFSLLQPTREKPVHCILSALDEMYYSSPCFNPEKILKKSIHA-RNTRRYADPN 534
PTL +F++LL V L + + ++ C P K L++ RN R P
Sbjct: 373 GPTLDTEFYNLLNGLPSPFVERSLEDISRL--TNCCLEPAKWLQEQYKKYRNLPRRPSPA 430
Query: 535 SY-LDGGLVRIHRAQVTPTKIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
+ L+ GLV +HR QVTP+K+Y PEVNVSNRV+RQFS Y+D+FLR+SF+DED
Sbjct: 431 AISLEPGLVYVHRVQVTPSKVYFYGPEVNVSNRVLRQFSNYIDNFLRISFIDED 484
>KDO60785.1 hypothetical protein CISIN_1g0025862mg [Citrus sinensis] KDO60786.1
hypothetical protein CISIN_1g0025862mg [Citrus sinensis]
Length = 724
Score = 152 bits (385), Expect = 6e-39
Identities = 86/215 (40%), Positives = 120/215 (55%), Gaps = 4/215 (1%)
Frame = +1
Query: 61 YYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDKDIKGTFYNYKVIKDDLSLQMP 240
++K D W+RTTDFT + IGQ + +CMELP + D K F YK +D L+
Sbjct: 89 FFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETG 148
Query: 241 FFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVLNWPTLKRDFFSLLQPTREK-PV 417
+ LV Y+IL+ +NLLVQ G + P L +F+ L+ P R +
Sbjct: 149 SAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSI 208
Query: 418 HCILSALDEMYYSSPC-FNPEKILKKSIHARNTRRY--ADPNSYLDGGLVRIHRAQVTPT 588
CI ALD++Y+ C + P + L T R + P LD GLV +HR QVTP+
Sbjct: 209 SCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPS 268
Query: 589 KIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
++Y C PE+NVSNRV+R F R +D+FLR+SF+DED
Sbjct: 269 RVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDED 303
>XP_006469265.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform X2 [Citrus
sinensis] XP_015382842.1 PREDICTED: RNA-dependent RNA
polymerase 1 isoform X2 [Citrus sinensis]
Length = 1132
Score = 152 bits (385), Expect = 1e-38
Identities = 86/215 (40%), Positives = 120/215 (55%), Gaps = 4/215 (1%)
Frame = +1
Query: 61 YYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDKDIKGTFYNYKVIKDDLSLQMP 240
++K D W+RTTDFT + IGQ + +CMELP + D K F YK +D L+
Sbjct: 200 FFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETG 259
Query: 241 FFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVLNWPTLKRDFFSLLQPTREK-PV 417
+ LV Y+IL+ +NLLVQ G + P L +F+ L+ P R +
Sbjct: 260 SAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSI 319
Query: 418 HCILSALDEMYYSSPC-FNPEKILKKSIHARNTRRY--ADPNSYLDGGLVRIHRAQVTPT 588
CI ALD++Y+ C + P + L T R + P LD GLV +HR QVTP+
Sbjct: 320 SCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPS 379
Query: 589 KIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
++Y C PE+NVSNRV+R F R +D+FLR+SF+DED
Sbjct: 380 RVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDED 414
>XP_015382841.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform X1 [Citrus
sinensis]
Length = 1138
Score = 152 bits (385), Expect = 1e-38
Identities = 86/215 (40%), Positives = 120/215 (55%), Gaps = 4/215 (1%)
Frame = +1
Query: 61 YYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDKDIKGTFYNYKVIKDDLSLQMP 240
++K D W+RTTDFT + IGQ + +CMELP + D K F YK +D L+
Sbjct: 206 FFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVLETG 265
Query: 241 FFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVLNWPTLKRDFFSLLQPTREK-PV 417
+ LV Y+IL+ +NLLVQ G + P L +F+ L+ P R +
Sbjct: 266 SAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAPVSI 325
Query: 418 HCILSALDEMYYSSPC-FNPEKILKKSIHARNTRRY--ADPNSYLDGGLVRIHRAQVTPT 588
CI ALD++Y+ C + P + L T R + P LD GLV +HR QVTP+
Sbjct: 326 SCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPS 385
Query: 589 KIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
++Y C PE+NVSNRV+R F R +D+FLR+SF+DED
Sbjct: 386 RVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDED 420
>NP_001267692.1 RNA-dependent RNA polymerase 1-like [Cucumis sativus]
XP_011654423.1 PREDICTED: RNA-dependent RNA polymerase
1-like isoform X1 [Cucumis sativus] ADU77015.1
RNA-dependent RNA polymerase 1a [Cucumis sativus]
ALM88233.1 RNA-dependent RNA polymerase 1a [Cucumis
sativus]
Length = 1130
Score = 152 bits (383), Expect = 2e-38
Identities = 83/230 (36%), Positives = 125/230 (54%), Gaps = 3/230 (1%)
Frame = +1
Query: 13 YKEDSSSSAD--DAQGLEYYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDKDIK 186
YK+ + +S D L ++K SD W+RTTDFT + IGQ SS+C++LPNG + K
Sbjct: 180 YKKVAPNSGQIFDNPLLNFFKEASDDQWVRTTDFTSSCSIGQSSSLCLKLPNGRQLPPFK 239
Query: 187 GTFYNYKVIKDDLSLQMPFFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVLNWPT 366
F Y+ + + L R + Y+IL+ +N LVQ G + WP
Sbjct: 240 QNFAYYEEFEHEFRLIDEDANFSFCRDLAPIVDSRSHVLPYKILFKINALVQYGCIPWPL 299
Query: 367 LKRDFFSLLQPTREKPVHCILSALDEMYYSSPC-FNPEKILKKSIHARNTRRYADPNSYL 543
L F+ L++ + + AL+++++ C ++P L + + P L
Sbjct: 300 LDASFYRLVERIITTRIEFVEHALEKLFHLKECNYDPSNFLTEQYRKYSRHPPNSPVISL 359
Query: 544 DGGLVRIHRAQVTPTKIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
D GLV + R Q+TP K++ C PEVNVSNRV+R FS+Y+D+FLRVSFVDE+
Sbjct: 360 DDGLVYVRRVQITPCKVFFCGPEVNVSNRVLRHFSQYIDNFLRVSFVDEE 409
>KGN50761.1 hypothetical protein Csa_5G239140 [Cucumis sativus]
Length = 1172
Score = 152 bits (383), Expect = 2e-38
Identities = 83/230 (36%), Positives = 125/230 (54%), Gaps = 3/230 (1%)
Frame = +1
Query: 13 YKEDSSSSAD--DAQGLEYYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDKDIK 186
YK+ + +S D L ++K SD W+RTTDFT + IGQ SS+C++LPNG + K
Sbjct: 180 YKKVAPNSGQIFDNPLLNFFKEASDDQWVRTTDFTSSCSIGQSSSLCLKLPNGRQLPPFK 239
Query: 187 GTFYNYKVIKDDLSLQMPFFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVLNWPT 366
F Y+ + + L R + Y+IL+ +N LVQ G + WP
Sbjct: 240 QNFAYYEEFEHEFRLIDEDANFSFCRDLAPIVDSRSHVLPYKILFKINALVQYGCIPWPL 299
Query: 367 LKRDFFSLLQPTREKPVHCILSALDEMYYSSPC-FNPEKILKKSIHARNTRRYADPNSYL 543
L F+ L++ + + AL+++++ C ++P L + + P L
Sbjct: 300 LDASFYRLVERIITTRIEFVEHALEKLFHLKECNYDPSNFLTEQYRKYSRHPPNSPVISL 359
Query: 544 DGGLVRIHRAQVTPTKIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
D GLV + R Q+TP K++ C PEVNVSNRV+R FS+Y+D+FLRVSFVDE+
Sbjct: 360 DDGLVYVRRVQITPCKVFFCGPEVNVSNRVLRHFSQYIDNFLRVSFVDEE 409
>XP_002311536.1 RNA-directed RNA Polymerase family protein [Populus trichocarpa]
EEE88903.1 RNA-directed RNA Polymerase family protein
[Populus trichocarpa]
Length = 1133
Score = 151 bits (381), Expect = 3e-38
Identities = 93/234 (39%), Positives = 128/234 (54%), Gaps = 7/234 (2%)
Frame = +1
Query: 13 YKED--SSSSADDAQGLEYYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDKDIK 186
Y+ D SSS+ + L Y++ D W+RTTDFT + GIG SS+C+ELPN + +
Sbjct: 180 YERDVPSSSNVFEDPLLNYFRDVPDEQWVRTTDFTPSCGIGHSSSLCLELPNHLQLPNFN 239
Query: 187 GTFYNYKVIKDDLSLQMPFFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVLNWPT 366
F+ YK + L+ LV Y IL+ VNLLVQ G L
Sbjct: 240 ENFFYYKENEGTFVLESGLTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGSM 299
Query: 367 LKRDFFSLLQPTREKPVHCILSALDEMYYSSPC-FNPEKIL----KKSIHARNTRRYADP 531
L F+ L+ P R PV CI AL+++Y+ C + P K KK + + N R P
Sbjct: 300 LDDIFYRLVDPNR-MPVRCIEYALEKLYHLKECCYEPSKWFNEQYKKYLTSGNPPR--SP 356
Query: 532 NSYLDGGLVRIHRAQVTPTKIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
LD GLV +++ Q+TP K++ C PEVNVSNRV+RQ+ +D+FLRVSFVDE+
Sbjct: 357 VLSLDAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRQYREDIDNFLRVSFVDEE 410
>AJA90778.1 RNA-dependent RNA polymerase 2 [Ginkgo biloba]
Length = 1114
Score = 150 bits (380), Expect = 5e-38
Identities = 82/214 (38%), Positives = 122/214 (57%), Gaps = 2/214 (0%)
Frame = +1
Query: 58 EYYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDKDIKGTFYNYKVIKDDLSLQM 237
++ K ++ W+RTTDF+ IGQ S+ C+ELPNG + I + +YK ++++L+L+
Sbjct: 203 KFCKEDIESQWVRTTDFSAFCSIGQSSAFCLELPNGVEVAHITESMPHYKALEEELTLEY 262
Query: 238 PFFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVLNWPTLKRDFFSLLQPTREKPV 417
+ LV YQ ++ +N L+ G+L+ PTL ++F+ LL+ R V
Sbjct: 263 GSSFSSSQSLVPIVNAPNDVNLSYQTVFQINSLIHRGILSGPTLCQEFYDLLRSDRTPLV 322
Query: 418 HCILSALDEMYYSSPCFNPEKILKKSIHA-RNTRRYADPNSY-LDGGLVRIHRAQVTPTK 591
H L+ + CF PE L+ ++ RN R+ + D GL+ HR VTP+K
Sbjct: 323 HTNLALTELHKLKDICFEPEIWLRNQLNKFRNERKQLKSAAISTDHGLMNFHRVLVTPSK 382
Query: 592 IYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
+Y PE+NVSN V RQF+ YMDDFLRVSFVDED
Sbjct: 383 VYFLGPELNVSNCVTRQFANYMDDFLRVSFVDED 416
>JAU50428.1 RNA-dependent RNA polymerase 1 [Noccaea caerulescens]
Length = 1109
Score = 150 bits (378), Expect = 8e-38
Identities = 90/236 (38%), Positives = 129/236 (54%), Gaps = 5/236 (2%)
Frame = +1
Query: 1 PSVFYKEDSSSSADDAQGLEYYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDKD 180
P +F KE+ +S ++Y GSD WIRTTDFT + IGQ +S C+ELP D
Sbjct: 177 PKIFEKEEQPASLLFGM-FDFYSDGSDEQWIRTTDFTSSSRIGQSTSFCLELPRHLNVPD 235
Query: 181 IKGTFYNYKVIKDDLSLQMP--FFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVL 354
K F NY + L + + LV ++IL+ VN LVQ G L
Sbjct: 236 FKENFANYAEHEAGSFLVQSGSSYSSNANELVPVVDPPPGIDLPFEILFAVNALVQHGCL 295
Query: 355 NWPTLKRDFFSLLQPTREKPVHCILSALDEMYY-SSPCFNPEKILKKSIHARNTRRYA-- 525
P L +F+ LL R + I ++L++++Y C+ P + L++ ++
Sbjct: 296 PGPALDLEFYQLLDQERYERA-IIDNSLEKLFYLKESCYEPARWLREEYKRWRSKGKLPE 354
Query: 526 DPNSYLDGGLVRIHRAQVTPTKIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
P LD GLV ++R QVTPT++Y C PEVNVSNRV+R +SRY+++FLR+SFVDED
Sbjct: 355 SPMISLDEGLVYMYRVQVTPTRVYFCGPEVNVSNRVLRHYSRYINNFLRISFVDED 410
>JAU85434.1 RNA-dependent RNA polymerase 1 [Noccaea caerulescens]
Length = 1109
Score = 149 bits (377), Expect = 1e-37
Identities = 90/236 (38%), Positives = 129/236 (54%), Gaps = 5/236 (2%)
Frame = +1
Query: 1 PSVFYKEDSSSSADDAQGLEYYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDKD 180
P +F KE+ +S ++Y GSD WIRTTDFT + IGQ +S C+ELP D
Sbjct: 177 PKIFEKEEQPASLLFGM-FDFYSDGSDEQWIRTTDFTSSSRIGQSTSFCLELPRHLNVPD 235
Query: 181 IKGTFYNYKVIKDDLSL--QMPFFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVL 354
K F NY + L + + LV ++IL+ VN LVQ G L
Sbjct: 236 FKENFANYAEHEAGSFLVESGSSYSSNANELVPVVDPPPGIDLPFEILFAVNALVQHGCL 295
Query: 355 NWPTLKRDFFSLLQPTREKPVHCILSALDEMYY-SSPCFNPEKILKKSIHARNTRRYA-- 525
P L +F+ LL R + I ++L++++Y C+ P + L++ ++
Sbjct: 296 PGPALDLEFYQLLDQERYERA-IIDNSLEKLFYLKESCYEPARWLRQEYKRWRSKGKLPE 354
Query: 526 DPNSYLDGGLVRIHRAQVTPTKIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
P LD GLV ++R QVTPT++Y C PEVNVSNRV+R +SRY+++FLR+SFVDED
Sbjct: 355 SPMISLDEGLVYMYRVQVTPTRVYFCGPEVNVSNRVLRHYSRYINNFLRISFVDED 410
>JAU76270.1 RNA-dependent RNA polymerase 1 [Noccaea caerulescens]
Length = 1109
Score = 149 bits (376), Expect = 2e-37
Identities = 90/236 (38%), Positives = 129/236 (54%), Gaps = 5/236 (2%)
Frame = +1
Query: 1 PSVFYKEDSSSSADDAQGLEYYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDKD 180
P +F KE+ +S ++Y GSD WIRTTDFT + IGQ +S C+ELP D
Sbjct: 177 PKIFEKEEQPASLLFGM-YDFYSDGSDEQWIRTTDFTSSSRIGQSTSFCLELPRHLNVPD 235
Query: 181 IKGTFYNYKVIKDDLSL--QMPFFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVL 354
K F NY + L + + LV ++IL+ VN LVQ G L
Sbjct: 236 FKENFANYAEHEAGSFLVESGSSYSSNANELVPVVDPPPGIDLPFEILFAVNALVQHGCL 295
Query: 355 NWPTLKRDFFSLLQPTREKPVHCILSALDEMYY-SSPCFNPEKILKKSIHARNTRRYA-- 525
P L +F+ LL R + I ++L++++Y C+ P + L++ ++
Sbjct: 296 PGPALDLEFYQLLDQERYERA-IIDNSLEKLFYLKESCYEPARWLREEYKRWRSKGKLPE 354
Query: 526 DPNSYLDGGLVRIHRAQVTPTKIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
P LD GLV ++R QVTPT++Y C PEVNVSNRV+R +SRY+++FLR+SFVDED
Sbjct: 355 SPMISLDEGLVYMYRVQVTPTRVYFCGPEVNVSNRVLRHYSRYINNFLRISFVDED 410
>XP_006416969.1 hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum]
ESQ35322.1 hypothetical protein EUTSA_v10006629mg
[Eutrema salsugineum]
Length = 1108
Score = 148 bits (373), Expect = 4e-37
Identities = 90/236 (38%), Positives = 126/236 (53%), Gaps = 5/236 (2%)
Frame = +1
Query: 1 PSVFYKEDSSSSADDAQGLEYYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDKD 180
P +F KED + L+++ GSD WIRTTDFT + IGQ SS C+ELP D
Sbjct: 177 PKIFEKEDQPVNLLFGM-LDFFSDGSDEQWIRTTDFTSSSCIGQSSSFCLELPRQLNVPD 235
Query: 181 IKGTFYNYKVIKDDLSL--QMPFFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVL 354
+ F NY + L + + LV ++IL+ VN LVQ +
Sbjct: 236 FRENFANYAEHEAGTFLIESGSSYSSDATNLVPVVDPPPGFDLPFEILFKVNALVQSACI 295
Query: 355 NWPTLKRDFFSLLQPTREKPVHCILSALDEMYYSSPC-FNPEKILKKSIHARNTRRYA-- 525
P L DF+ LL P + + I +L++++Y C + P + L++ T+
Sbjct: 296 PGPVLDLDFYQLLDPQKHERA-LIDHSLEKLFYLKECCYEPARWLREGYKEWTTKEKLPE 354
Query: 526 DPNSYLDGGLVRIHRAQVTPTKIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
P LD GLV +HR QVTPT+IY PEVNVSNRV+R +S Y+++FLR+SFVDED
Sbjct: 355 SPMISLDDGLVYMHRVQVTPTRIYFQGPEVNVSNRVLRHYSNYINNFLRISFVDED 410
>XP_010088177.1 RNA-dependent RNA polymerase 1 [Morus notabilis] EXB32317.1
RNA-dependent RNA polymerase 1 [Morus notabilis]
Length = 862
Score = 147 bits (372), Expect = 5e-37
Identities = 86/205 (41%), Positives = 120/205 (58%), Gaps = 3/205 (1%)
Frame = +1
Query: 88 WIRTTDFTGNFGIGQCSSICMELPNGAKDKDIKGTFYNYKVIKDDLSLQMPFFPMPTSRL 267
W R DFT + IGQ S++C+E+PN + +++ F YK + SLQ +S L
Sbjct: 188 WERDVDFTPSCCIGQSSALCLEIPNWRQLPNLRDVFVYYKEDEGQFSLQQGCPFSSSSDL 247
Query: 268 VXXXXXXXXXXXXYQILYHVNLLVQEGVLNWPTLKRDFFSLLQPTREKPVHCILSALDEM 447
V Y+IL+ VN LVQ G L L +FF L+ P+R P+ CI SALD++
Sbjct: 248 VPMVVPPKGIILPYKILFKVNSLVQHGCLPAEVLDLNFFRLVDPSRI-PLECIESALDKL 306
Query: 448 YYSSPC-FNPEKILKKSIHARNTRRYAD--PNSYLDGGLVRIHRAQVTPTKIYLCRPEVN 618
Y+ C ++P + LKK NT P L+ GLV +HR QVTPTK+Y C PE+N
Sbjct: 307 YHLKDCCYDPLRWLKKQYIKYNTSGQIPKMPTIALEDGLVYVHRVQVTPTKVYFCGPEIN 366
Query: 619 VSNRVIRQFSRYMDDFLRVSFVDED 693
+SNRV+R + + +D+FLRVSFVDE+
Sbjct: 367 LSNRVLRNYPKDIDNFLRVSFVDEN 391
>JAU07878.1 RNA-dependent RNA polymerase 1 [Noccaea caerulescens]
Length = 1109
Score = 147 bits (371), Expect = 7e-37
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 5/236 (2%)
Frame = +1
Query: 1 PSVFYKEDSSSSADDAQGLEYYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDKD 180
P +F KE+ +S ++Y GSD WIRTTDFT + IGQ +S C+ELP D
Sbjct: 177 PKIFEKEEQPASLLFGM-FDFYSDGSDEQWIRTTDFTSSSRIGQSTSFCLELPRHLNVPD 235
Query: 181 IKGTFYNYKVIKDDLSL--QMPFFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVL 354
K F NY + L + + LV ++IL+ VN LVQ G L
Sbjct: 236 FKENFANYAEHEAGSFLVESGSSYSSNANELVPVVDPPPGIDLPFEILFAVNALVQHGCL 295
Query: 355 NWPTLKRDFFSLLQPTREKPVHCILSALDEMYY-SSPCFNPEKILKKSIHARNTRRYA-- 525
P L +F+ LL R + I ++L++++Y C+ P + L++ ++
Sbjct: 296 PGPALDLEFYQLLDQERYERA-IIDNSLEKLFYLKESCYEPARWLREEYKRWRSKGKLPE 354
Query: 526 DPNSYLDGGLVRIHRAQVTPTKIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
P LD GLV ++R QVTPT++Y C PEVNVSNRV+R +S Y+++FLR+SFVDED
Sbjct: 355 SPMISLDEGLVYMYRVQVTPTRVYFCGPEVNVSNRVLRHYSSYINNFLRISFVDED 410
>BAT98859.1 hypothetical protein VIGAN_10021400 [Vigna angularis var.
angularis]
Length = 1131
Score = 147 bits (371), Expect = 7e-37
Identities = 85/216 (39%), Positives = 120/216 (55%), Gaps = 5/216 (2%)
Frame = +1
Query: 61 YYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDKDIKGTFYNYKVIKDDLSLQMP 240
Y+K D W RTTDFT IGQ S+IC+ELP+G + K F Y+ + +LQ
Sbjct: 204 YHKDVPDEQWARTTDFTTGCCIGQSSAICLELPSGQNLPNFKDIFAYYEQSEGQYTLQAG 263
Query: 241 FFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVLNWPTLKRDFFSLLQPTREKPVH 420
P + + + IL+ VN LVQ L P L DF+ ++ P R P+
Sbjct: 264 V-PFSQNGSLVPIVAPRGVEIPFDILFKVNSLVQHVCLTGPALDDDFYRMVDP-RRIPLD 321
Query: 421 CILSALDEMYYSSP-CFNPEKIL----KKSIHARNTRRYADPNSYLDGGLVRIHRAQVTP 585
I +AL++MYYS C++P K L K+ + + + P LD GLV + R Q+TP
Sbjct: 322 FIENALEKMYYSKEFCYDPTKWLTEQYKRYLQSNSKNGPRSPAISLDAGLVYVRRVQITP 381
Query: 586 TKIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
K+Y C PE+NVSNRV+R F ++D+F+RVSFVDE+
Sbjct: 382 CKVYFCGPEINVSNRVLRHFHEHLDNFIRVSFVDEE 417
>XP_017427470.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Vigna
angularis] XP_017427471.1 PREDICTED: probable
RNA-dependent RNA polymerase 1 [Vigna angularis]
KOM46251.1 hypothetical protein LR48_Vigan06g155700
[Vigna angularis]
Length = 1131
Score = 147 bits (371), Expect = 7e-37
Identities = 85/216 (39%), Positives = 120/216 (55%), Gaps = 5/216 (2%)
Frame = +1
Query: 61 YYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDKDIKGTFYNYKVIKDDLSLQMP 240
Y+K D W RTTDFT IGQ S+IC+ELP+G + K F Y+ + +LQ
Sbjct: 204 YHKDVPDEQWARTTDFTTGCCIGQSSAICLELPSGQNLPNFKDIFAYYEQSEGQYTLQAG 263
Query: 241 FFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVLNWPTLKRDFFSLLQPTREKPVH 420
P + + + IL+ VN LVQ L P L DF+ ++ P R P+
Sbjct: 264 V-PFSQNGSLVPIVAPRGVEIPFDILFKVNSLVQHVCLTGPALDDDFYRMVDP-RRIPLD 321
Query: 421 CILSALDEMYYSSP-CFNPEKIL----KKSIHARNTRRYADPNSYLDGGLVRIHRAQVTP 585
I +AL++MYYS C++P K L K+ + + + P LD GLV + R Q+TP
Sbjct: 322 FIENALEKMYYSKEFCYDPTKWLTEQYKRYLQSNSKNGPRSPAISLDAGLVYVRRVQITP 381
Query: 586 TKIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
K+Y C PE+NVSNRV+R F ++D+F+RVSFVDE+
Sbjct: 382 CKVYFCGPEINVSNRVLRHFHEHLDNFIRVSFVDEE 417
>XP_010476552.1 PREDICTED: RNA-dependent RNA polymerase 1-like [Camelina sativa]
Length = 1109
Score = 147 bits (370), Expect = 1e-36
Identities = 91/239 (38%), Positives = 127/239 (53%), Gaps = 8/239 (3%)
Frame = +1
Query: 1 PSVFYKEDSSSSADDAQGLEYYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDKD 180
P +F KED + +++Y GSD WIRTTDFT + IGQ ++ C+ELP D
Sbjct: 177 PKIFEKEDQPVNLLFGL-MDFYSDGSDEQWIRTTDFTSSSCIGQSTTFCLELPVHLNLPD 235
Query: 181 IKGTFYNYKVIKDDLSL--QMPFFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVL 354
K F NY + L + ++LV ++IL+ VN LVQ L
Sbjct: 236 FKENFANYAEHRATTFLIESGSSYSSNANKLVIVVDPPPGVVLPFEILFKVNTLVQNACL 295
Query: 355 NWPTLKRDFFSLLQPTREKPV---HCILSALDEMYYSSPC-FNPEKILKKSIH--ARNTR 516
P L DF+ LL P + HC L+++YY C + P + L++ A N +
Sbjct: 296 PGPALDLDFYQLLNPKKYDRALIDHC----LEKLYYLGECCYEPARWLREEYKKLASNKK 351
Query: 517 RYADPNSYLDGGLVRIHRAQVTPTKIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
P LD GLV ++R QVTP ++Y PEVNVSNRV+R +S+Y+++FLRVSFVDED
Sbjct: 352 LPLSPTISLDDGLVYMYRVQVTPARVYFLGPEVNVSNRVLRHYSKYINNFLRVSFVDED 410
>NP_001315397.1 RNA-dependent RNA polymerase 1 [Cucumis melo] ALM88236.1
RNA-dependent RNA polymerase 1a [Cucumis melo]
Length = 1129
Score = 147 bits (370), Expect = 1e-36
Identities = 81/230 (35%), Positives = 122/230 (53%), Gaps = 3/230 (1%)
Frame = +1
Query: 13 YKEDSSSSAD--DAQGLEYYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDKDIK 186
YK+ + SS D L ++ D W+RTTDFT + IGQ SS+C++LPNG + K
Sbjct: 180 YKKVAPSSGQIFDNPILNFFMEVPDDQWVRTTDFTSSCSIGQSSSLCLKLPNGLELPTFK 239
Query: 187 GTFYNYKVIKDDLSLQMPFFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVLNWPT 366
F Y+ + + L R + Y+I++ +N LVQ G + W
Sbjct: 240 QNFAYYEEFEHEFRLIDEGASFSFCRDLAPIVDSRPHVLPYEIIFKINALVQHGCIPWSL 299
Query: 367 LKRDFFSLLQPTREKPVHCILSALDEMYYSSPC-FNPEKILKKSIHARNTRRYADPNSYL 543
L F+ L++ + + AL+++++ C ++P L + + P L
Sbjct: 300 LDTSFYRLVERIITIRIEFVEHALEKLFHLKECNYDPSNFLTEQFRRYSRHPPNSPVISL 359
Query: 544 DGGLVRIHRAQVTPTKIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
D GLV + R Q+TP K+Y C PEVNVSNRV+R FS+Y+D+FLRVSFVDE+
Sbjct: 360 DDGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSKYIDNFLRVSFVDEE 409
>XP_008465250.1 PREDICTED: RNA-dependent RNA polymerase 1 [Cucumis melo]
XP_008465251.1 PREDICTED: RNA-dependent RNA polymerase 1
[Cucumis melo] XP_008465253.1 PREDICTED: RNA-dependent
RNA polymerase 1 [Cucumis melo] XP_008465254.1
PREDICTED: RNA-dependent RNA polymerase 1 [Cucumis melo]
Length = 1129
Score = 147 bits (370), Expect = 1e-36
Identities = 81/230 (35%), Positives = 122/230 (53%), Gaps = 3/230 (1%)
Frame = +1
Query: 13 YKEDSSSSAD--DAQGLEYYKHGSDTNWIRTTDFTGNFGIGQCSSICMELPNGAKDKDIK 186
YK+ + SS D L ++ D W+RTTDFT + IGQ SS+C++LPNG + K
Sbjct: 180 YKKVAPSSGQIFDNPILNFFMEVPDDQWVRTTDFTSSCSIGQSSSLCLKLPNGLELPTFK 239
Query: 187 GTFYNYKVIKDDLSLQMPFFPMPTSRLVXXXXXXXXXXXXYQILYHVNLLVQEGVLNWPT 366
F Y+ + + L R + Y+I++ +N LVQ G + W
Sbjct: 240 QNFAYYEEFEHEFRLIDEDASFSFCRDLAPIVDSRPHVLPYEIIFKINALVQHGCIPWSL 299
Query: 367 LKRDFFSLLQPTREKPVHCILSALDEMYYSSPC-FNPEKILKKSIHARNTRRYADPNSYL 543
L F+ L++ + + AL+++++ C ++P L + + P L
Sbjct: 300 LDTSFYRLVERIITIRIEFVEHALEKLFHLKECNYDPSNFLTEQFRRYSRHPPNSPVISL 359
Query: 544 DGGLVRIHRAQVTPTKIYLCRPEVNVSNRVIRQFSRYMDDFLRVSFVDED 693
D GLV + R Q+TP K+Y C PEVNVSNRV+R FS+Y+D+FLRVSFVDE+
Sbjct: 360 DDGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSKYIDNFLRVSFVDEE 409