BLASTX nr result

ID: Ephedra29_contig00018118 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00018118
         (508 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010938078.1 PREDICTED: mediator of RNA polymerase II transcri...    84   1e-15
XP_018818169.1 PREDICTED: mediator of RNA polymerase II transcri...    82   3e-15
XP_018818097.1 PREDICTED: mediator of RNA polymerase II transcri...    82   3e-15
XP_018818023.1 PREDICTED: mediator of RNA polymerase II transcri...    82   3e-15
XP_010278916.1 PREDICTED: mediator of RNA polymerase II transcri...    82   6e-15
XP_018675347.1 PREDICTED: mediator of RNA polymerase II transcri...    80   3e-14
XP_009420227.2 PREDICTED: mediator of RNA polymerase II transcri...    80   3e-14
XP_007206343.1 hypothetical protein PRUPE_ppa017529mg [Prunus pe...    78   1e-13
ONI04055.1 hypothetical protein PRUPE_6G299600 [Prunus persica] ...    78   1e-13
XP_017187171.1 PREDICTED: mediator of RNA polymerase II transcri...    77   2e-13
XP_010921239.1 PREDICTED: mediator of RNA polymerase II transcri...    77   2e-13
XP_010921237.1 PREDICTED: mediator of RNA polymerase II transcri...    77   3e-13
XP_006842623.1 PREDICTED: mediator of RNA polymerase II transcri...    77   3e-13
XP_008782719.1 PREDICTED: mediator of RNA polymerase II transcri...    76   5e-13
XP_008244324.1 PREDICTED: mediator of RNA polymerase II transcri...    76   6e-13
KCW88467.1 hypothetical protein EUGRSUZ_A00855 [Eucalyptus grandis]    74   2e-12
XP_010044349.1 PREDICTED: mediator of RNA polymerase II transcri...    74   2e-12
XP_010044343.1 PREDICTED: mediator of RNA polymerase II transcri...    74   2e-12
XP_009337829.1 PREDICTED: mediator of RNA polymerase II transcri...    74   3e-12
XP_020108025.1 mediator of RNA polymerase II transcription subun...    74   4e-12

>XP_010938078.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like [Elaeis guineensis]
          Length = 1330

 Score = 84.0 bits (206), Expect = 1e-15
 Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 12/179 (6%)
 Frame = -2

Query: 504 TAEDCSLE-----AQWTKNQAGSMEDVIHQGLVEHNTDTIQKHHEKLRKDNAFIAIQTIL 340
           T EDC L+       +  N+   + D+  +G  + N +   KH E+LR+ N  +A++ + 
Sbjct: 176 TLEDCGLQLTFRHGDFYANEGHQVMDIDIKGSSDENRN---KHREQLRRTNVLLAMEVVE 232

Query: 339 KLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVNLASSNTLYGSK-LATPLNRCVQKL 163
           K+T  KR    +RL+ +NM ++ + L ERL+ +E + ++S  L  +  +   L+  VQK 
Sbjct: 233 KITSNKRAKFFLRLIYLNMPEKFNGLLERLQFIESHKSASQALLSANHILDSLSTNVQKA 292

Query: 162 FSFQAEPCHFYGVNALIN-GLSS-----TSAFGRSSQWLPFDLFMENKMDGRRLPAISA 4
             ++ +      +  +++ G SS     +S  GR++ W+ FDLFMEN MDGR+L  +SA
Sbjct: 293 MDWECQINKHQLLGVMVDAGPSSYLSCHSSGTGRAACWISFDLFMENAMDGRQLHTVSA 351


>XP_018818169.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like isoform X3 [Juglans regia]
          Length = 1274

 Score = 82.4 bits (202), Expect = 3e-15
 Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 7/139 (5%)
 Frame = -2

Query: 396 KHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVN-LASS 220
           +HHEK+R  N+F AI+ + KLTE ++    +RLV +NM      L +RL+ LE + L S 
Sbjct: 211 EHHEKMRTTNSFTAIEVLGKLTESRKAMVILRLVHLNMPVNFSGLLQRLQFLEASELVSP 270

Query: 219 NTLYGSKLATPLNRCVQKLFSFQAEPCHFYGVNALINGLSST------SAFGRSSQWLPF 58
           +    ++L   L+  +Q++  F+ +        +L++  S        S FG+S+ W PF
Sbjct: 271 HLNSANQLLAKLSANIQRVMGFEYQLNRSQLSGSLLDIASCKPVSCFHSQFGQSACWAPF 330

Query: 57  DLFMENKMDGRRLPAISAI 1
           D++MEN MDG++LP  SA+
Sbjct: 331 DIYMENAMDGKQLPIKSAV 349


>XP_018818097.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like isoform X2 [Juglans regia]
          Length = 1308

 Score = 82.4 bits (202), Expect = 3e-15
 Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 7/139 (5%)
 Frame = -2

Query: 396 KHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVN-LASS 220
           +HHEK+R  N+F AI+ + KLTE ++    +RLV +NM      L +RL+ LE + L S 
Sbjct: 211 EHHEKMRTTNSFTAIEVLGKLTESRKAMVILRLVHLNMPVNFSGLLQRLQFLEASELVSP 270

Query: 219 NTLYGSKLATPLNRCVQKLFSFQAEPCHFYGVNALINGLSST------SAFGRSSQWLPF 58
           +    ++L   L+  +Q++  F+ +        +L++  S        S FG+S+ W PF
Sbjct: 271 HLNSANQLLAKLSANIQRVMGFEYQLNRSQLSGSLLDIASCKPVSCFHSQFGQSACWAPF 330

Query: 57  DLFMENKMDGRRLPAISAI 1
           D++MEN MDG++LP  SA+
Sbjct: 331 DIYMENAMDGKQLPIKSAV 349


>XP_018818023.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like isoform X1 [Juglans regia]
          Length = 1328

 Score = 82.4 bits (202), Expect = 3e-15
 Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 7/139 (5%)
 Frame = -2

Query: 396 KHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVN-LASS 220
           +HHEK+R  N+F AI+ + KLTE ++    +RLV +NM      L +RL+ LE + L S 
Sbjct: 211 EHHEKMRTTNSFTAIEVLGKLTESRKAMVILRLVHLNMPVNFSGLLQRLQFLEASELVSP 270

Query: 219 NTLYGSKLATPLNRCVQKLFSFQAEPCHFYGVNALINGLSST------SAFGRSSQWLPF 58
           +    ++L   L+  +Q++  F+ +        +L++  S        S FG+S+ W PF
Sbjct: 271 HLNSANQLLAKLSANIQRVMGFEYQLNRSQLSGSLLDIASCKPVSCFHSQFGQSACWAPF 330

Query: 57  DLFMENKMDGRRLPAISAI 1
           D++MEN MDG++LP  SA+
Sbjct: 331 DIYMENAMDGKQLPIKSAV 349


>XP_010278916.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like [Nelumbo nucifera]
          Length = 1322

 Score = 81.6 bits (200), Expect = 6e-15
 Identities = 48/146 (32%), Positives = 86/146 (58%), Gaps = 7/146 (4%)
 Frame = -2

Query: 417 HNTDTIQKHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLE 238
           +  D  ++H E L+K NAF+ ++ + KLTE ++    +RLV +NM ++ + L +R++ LE
Sbjct: 202 NQNDKRREHCELLKKTNAFMTMEVLGKLTENRKVMVLLRLVHLNMAEKFNGLLQRIQFLE 261

Query: 237 VNLA-SSNTLYGSKLATPLNRCVQK--LFSFQAEPCHFYGVNALINGLSSTSAF----GR 79
            + + S N    S++   L+  +++     +Q      +GV   I   SS S++    GR
Sbjct: 262 SHKSVSPNIKSSSQILVRLSANIKRGLDLEYQLNKRQLFGVMIDIGSCSSASSYNFGAGR 321

Query: 78  SSQWLPFDLFMENKMDGRRLPAISAI 1
           ++ W+PFD+++E  MDGR+LPA SA+
Sbjct: 322 AACWVPFDIYVETAMDGRQLPATSAV 347


>XP_018675347.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like isoform X2 [Musa acuminata subsp. malaccensis]
          Length = 1067

 Score = 79.7 bits (195), Expect = 3e-14
 Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 24/192 (12%)
 Frame = -2

Query: 504 TAEDCSLEAQWTKNQ----AGSMEDVIHQGLVEHNTDTIQKHHEKLRKDNAFIAIQTILK 337
           T EDC  +           A   E  +   + E++ +   +HH+KLRK NA +AI+   K
Sbjct: 212 TIEDCGPQLVSADKHGCAYASGGEQTMQVDVKENSNERRNEHHDKLRKTNALMAIEVAEK 271

Query: 336 LTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVNLASSNTLYG-----SKLATPLNRCV 172
           ++  K+  A + L+ +NM +  + L +RL+ ++ N + S +L        KL T +N  V
Sbjct: 272 VSSNKKAKAFLHLIRINMPELFNGLLQRLQTIDANRSKSESLLSVSHILDKLFTNINSAV 331

Query: 171 QKLF---------------SFQAEPCHFYGVNALINGLSSTSAFGRSSQWLPFDLFMENK 37
              F               S+   PC+ +G              GR + W+P D+FMEN 
Sbjct: 332 NGEFLLNKHQLLGALADAGSYSLNPCNSHGA-------------GRGACWIPVDIFMENA 378

Query: 36  MDGRRLPAISAI 1
           MDG+ L AISA+
Sbjct: 379 MDGKHLYAISAV 390


>XP_009420227.2 PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like isoform X1 [Musa acuminata subsp. malaccensis]
          Length = 1362

 Score = 79.7 bits (195), Expect = 3e-14
 Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 24/192 (12%)
 Frame = -2

Query: 504 TAEDCSLEAQWTKNQ----AGSMEDVIHQGLVEHNTDTIQKHHEKLRKDNAFIAIQTILK 337
           T EDC  +           A   E  +   + E++ +   +HH+KLRK NA +AI+   K
Sbjct: 212 TIEDCGPQLVSADKHGCAYASGGEQTMQVDVKENSNERRNEHHDKLRKTNALMAIEVAEK 271

Query: 336 LTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVNLASSNTLYG-----SKLATPLNRCV 172
           ++  K+  A + L+ +NM +  + L +RL+ ++ N + S +L        KL T +N  V
Sbjct: 272 VSSNKKAKAFLHLIRINMPELFNGLLQRLQTIDANRSKSESLLSVSHILDKLFTNINSAV 331

Query: 171 QKLF---------------SFQAEPCHFYGVNALINGLSSTSAFGRSSQWLPFDLFMENK 37
              F               S+   PC+ +G              GR + W+P D+FMEN 
Sbjct: 332 NGEFLLNKHQLLGALADAGSYSLNPCNSHGA-------------GRGACWIPVDIFMENA 378

Query: 36  MDGRRLPAISAI 1
           MDG+ L AISA+
Sbjct: 379 MDGKHLYAISAV 390


>XP_007206343.1 hypothetical protein PRUPE_ppa017529mg [Prunus persica]
          Length = 1316

 Score = 77.8 bits (190), Expect = 1e-13
 Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
 Frame = -2

Query: 402 IQKHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLE-VNLA 226
           I++HHE++RK N+ +AI+ + KLTE +++   +RLV +NM ++ + L +RL+ L+   LA
Sbjct: 197 IKEHHERIRKRNSLLAIEVLAKLTESRKSLVLLRLVHLNMPERFNGLLQRLRFLKGRQLA 256

Query: 225 SSNTLYGSKLATPLNRCVQKL--FSFQAEPCHFYGVNALING----LSSTSAFGRSSQWL 64
           SS+     +L   L+  +  +  F  Q      +GV   I          S FG S+ W+
Sbjct: 257 SSDLNSALQLLARLSANIHSVVGFKHQLNKHRLFGVLLDIGSRKPVFHCNSGFGHSTCWV 316

Query: 63  PFDLFMENKMDGRRLPAISAI 1
            FD++MEN MDG++L   S I
Sbjct: 317 RFDIYMENAMDGKQLSIKSFI 337


>ONI04055.1 hypothetical protein PRUPE_6G299600 [Prunus persica] ONI04056.1
           hypothetical protein PRUPE_6G299600 [Prunus persica]
          Length = 1323

 Score = 77.8 bits (190), Expect = 1e-13
 Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
 Frame = -2

Query: 402 IQKHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLE-VNLA 226
           I++HHE++RK N+ +AI+ + KLTE +++   +RLV +NM ++ + L +RL+ L+   LA
Sbjct: 204 IKEHHERIRKRNSLLAIEVLAKLTESRKSLVLLRLVHLNMPERFNGLLQRLRFLKGRQLA 263

Query: 225 SSNTLYGSKLATPLNRCVQKL--FSFQAEPCHFYGVNALING----LSSTSAFGRSSQWL 64
           SS+     +L   L+  +  +  F  Q      +GV   I          S FG S+ W+
Sbjct: 264 SSDLNSALQLLARLSANIHSVVGFKHQLNKHRLFGVLLDIGSRKPVFHCNSGFGHSTCWV 323

Query: 63  PFDLFMENKMDGRRLPAISAI 1
            FD++MEN MDG++L   S I
Sbjct: 324 RFDIYMENAMDGKQLSIKSFI 344


>XP_017187171.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like isoform X1 [Malus domestica]
          Length = 365

 Score = 76.6 bits (187), Expect = 2e-13
 Identities = 51/144 (35%), Positives = 82/144 (56%), Gaps = 10/144 (6%)
 Frame = -2

Query: 402 IQKHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVNLAS 223
           +++H E++RK N+F+AI+ + KLT  ++    +RLV +NM +  + L +RL+ LE +  +
Sbjct: 201 VKEHRERIRKMNSFLAIEVLAKLTASRKALVLLRLVHLNMPEIFNGLLQRLRFLEGHHRA 260

Query: 222 SNTLYGSKLATPLNRC---VQKL--FSFQAEPCHFYGVNALING-----LSSTSAFGRSS 73
           S+ L  +    PL R    +Q++  F +Q     F GV  L NG         S FG S+
Sbjct: 261 SSDLRSA--VEPLARLSANIQRVSGFKYQLNKHQFVGV-LLDNGSQKPVFHCNSGFGHST 317

Query: 72  QWLPFDLFMENKMDGRRLPAISAI 1
            W+ FD++MEN MDG++L   S I
Sbjct: 318 CWVRFDIYMENAMDGKQLSIKSVI 341


>XP_010921239.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like isoform X2 [Elaeis guineensis]
          Length = 1331

 Score = 77.0 bits (188), Expect = 2e-13
 Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 15/183 (8%)
 Frame = -2

Query: 504 TAEDCSLEAQWTKN----QAGSMEDVIHQGLVEHNTDTIQKHHEKLRKDNAFIAIQTILK 337
           T EDC  +  +        A     V+   + E + +   +H E+LR  NA +AI+ + K
Sbjct: 176 TLEDCGFQLPFRDKYGNFNAKEGHQVMEIDVKESSDERWNRHREQLRGTNALLAIEVVGK 235

Query: 336 LTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVNLASSNTLYGS-----KLATPLNRCV 172
           +T  K+    IRL  +NM ++ + L ERL+ +E + ++S  L  +      L+  + R V
Sbjct: 236 ITSNKKARVFIRLFYLNMPEKFNDLLERLQFIESHKSASQALLSANHILDSLSANMRRAV 295

Query: 171 QKLFSFQAEPCHFYGVNALINGLSS------TSAFGRSSQWLPFDLFMENKMDGRRLPAI 10
              + ++    H  GV  L++   S      +S  G ++ W+ FD+FMEN MDG++L AI
Sbjct: 296 D--WEYKLNKQHHLGV--LVDDRPSSLLSCHSSGAGTAACWITFDMFMENAMDGKQLHAI 351

Query: 9   SAI 1
           SAI
Sbjct: 352 SAI 354


>XP_010921237.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like isoform X1 [Elaeis guineensis]
          Length = 1352

 Score = 77.0 bits (188), Expect = 3e-13
 Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 15/183 (8%)
 Frame = -2

Query: 504 TAEDCSLEAQWTKN----QAGSMEDVIHQGLVEHNTDTIQKHHEKLRKDNAFIAIQTILK 337
           T EDC  +  +        A     V+   + E + +   +H E+LR  NA +AI+ + K
Sbjct: 176 TLEDCGFQLPFRDKYGNFNAKEGHQVMEIDVKESSDERWNRHREQLRGTNALLAIEVVGK 235

Query: 336 LTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVNLASSNTLYGS-----KLATPLNRCV 172
           +T  K+    IRL  +NM ++ + L ERL+ +E + ++S  L  +      L+  + R V
Sbjct: 236 ITSNKKARVFIRLFYLNMPEKFNDLLERLQFIESHKSASQALLSANHILDSLSANMRRAV 295

Query: 171 QKLFSFQAEPCHFYGVNALINGLSS------TSAFGRSSQWLPFDLFMENKMDGRRLPAI 10
              + ++    H  GV  L++   S      +S  G ++ W+ FD+FMEN MDG++L AI
Sbjct: 296 D--WEYKLNKQHHLGV--LVDDRPSSLLSCHSSGAGTAACWITFDMFMENAMDGKQLHAI 351

Query: 9   SAI 1
           SAI
Sbjct: 352 SAI 354


>XP_006842623.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
           [Amborella trichopoda] ERN04298.1 hypothetical protein
           AMTR_s00077p00181380 [Amborella trichopoda]
          Length = 1314

 Score = 76.6 bits (187), Expect = 3e-13
 Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 19/188 (10%)
 Frame = -2

Query: 507 ATAEDCSLE---AQWTKNQ---------AGSMEDVIHQGLVEHNTDTIQKHHEKLRKDNA 364
           +T  DC+LE    Q T  +         AG M+  +   +  +  D + +H + LR  N+
Sbjct: 156 STLVDCTLEDWGLQGTAREKNGLYGTAGAGDMDIDVKGNIKGNKNDRLLEHRDHLRSMNS 215

Query: 363 FIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVNLAS-SNTLYGSKLATP 187
           + AI+ + KL E K++   +RLV  N+ ++   L +RL+ LE + +   N   G+ L   
Sbjct: 216 YAAIEVVGKLFESKKSSVLLRLVHHNLPEKYRGLLQRLQYLEAHKSKLPNMKVGTPLIGK 275

Query: 186 LNRCVQKLFSFQAEPCHFYGVNALINGLSSTSA----FG--RSSQWLPFDLFMENKMDGR 25
           L+  +Q++   + +      + A+I+   S S     FG   S+ W+ FDL+MEN MDG+
Sbjct: 276 LSGALQRVLERENQLNKCQVIRAMIDIGCSNSVLRHNFGVAHSASWISFDLYMENVMDGK 335

Query: 24  RLPAISAI 1
           +LPA SAI
Sbjct: 336 QLPATSAI 343


>XP_008782719.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like [Phoenix dactylifera]
          Length = 1331

 Score = 76.3 bits (186), Expect = 5e-13
 Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 11/179 (6%)
 Frame = -2

Query: 504 TAEDCSLEAQWTKNQAGSMEDVIHQ----GLVEHNTDTIQKHHEKLRKDNAFIAIQTILK 337
           T EDC  +  +         +  HQ     + E + +   +H E+LR  NA +AI+ + K
Sbjct: 176 TLEDCGFQLPFRDKHGNFYANEGHQVMEIDVKESSDERRNRHREQLRGTNALLAIEVVGK 235

Query: 336 LTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVNLASSNTLYGSK-LATPLNRCVQKLF 160
           +T  K+    +RL  +NM ++ + L ERL+ +E + ++S  L  +  +   L+  +QK  
Sbjct: 236 ITSNKKAKVFLRLFYLNMPEKFNDLLERLQFIESHKSASQALLSANHILDSLSANIQKAM 295

Query: 159 SFQAEPCHFYGVNALI----NGLSSTSAFG--RSSQWLPFDLFMENKMDGRRLPAISAI 1
            ++ +      +  L     + L S   FG  R + W+ FD+FMEN MDG++L  ISAI
Sbjct: 296 DWEYKLNRHQHLGVLFDDGPSSLLSCHIFGASRDACWITFDMFMENAMDGKQLHPISAI 354


>XP_008244324.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like [Prunus mume]
          Length = 1323

 Score = 75.9 bits (185), Expect = 6e-13
 Identities = 47/141 (33%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
 Frame = -2

Query: 402 IQKHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLE-VNLA 226
           +++HHE++RK N+ +AI+ + KLTE +++   +RLV +NM ++ + L +RL+ L+    A
Sbjct: 204 VKEHHERIRKRNSLLAIEVLAKLTESRKSLVLLRLVHLNMPERFNGLLQRLRFLKGRQFA 263

Query: 225 SSNTLYGSKLATPLNRCVQKL--FSFQAEPCHFYGVNALING----LSSTSAFGRSSQWL 64
           SS+     +L   L+  +  +  F +Q       GV   I          S FG S+ W+
Sbjct: 264 SSDLNSALQLLARLSANIHSVLGFKYQLNKHRLVGVLLDIGSRKPVFHCNSGFGHSTCWV 323

Query: 63  PFDLFMENKMDGRRLPAISAI 1
            FD++MEN MDG++L   S I
Sbjct: 324 RFDIYMENAMDGKQLSIKSFI 344


>KCW88467.1 hypothetical protein EUGRSUZ_A00855 [Eucalyptus grandis]
          Length = 1318

 Score = 74.3 bits (181), Expect = 2e-12
 Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
 Frame = -2

Query: 507 ATAEDCSLEAQWTKNQAGSMEDVIHQ----GLVEHNTDTIQKHHEKLRKDNAFIAIQTIL 340
           +T +D  L+        GS E + H     G+     +    H E +R  N+ IA++ + 
Sbjct: 162 STMDDWGLQIASMGGLCGSFESMEHHQRNVGIRGSEDNKRSGHREYIRNMNSLIAMEVLE 221

Query: 339 KLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEV-NLASSNTLYGSKLATPLNRCVQKL 163
            LT  ++  A +RL+ MNM  + + L +RL+ LE   L S N +   ++   L+  + K+
Sbjct: 222 NLTRSRKALALLRLIHMNMPDKFNELLQRLQFLETYKLPSPNLISAKEVLARLSSNIHKV 281

Query: 162 FSFQAE-PCHFYGVNALINGLSST----SAFGRSSQWLPFDLFMENKMDGRRLPAISA 4
            +F+++    F G+   I  + S     S    S+ W PFD+++E  MDGR LP  SA
Sbjct: 282 LAFESDLKRSFIGMFLNIRSIKSVPYSDSGSALSACWAPFDIYVETAMDGRLLPVTSA 339


>XP_010044349.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
           isoform X2 [Eucalyptus grandis]
          Length = 1359

 Score = 74.3 bits (181), Expect = 2e-12
 Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
 Frame = -2

Query: 507 ATAEDCSLEAQWTKNQAGSMEDVIHQ----GLVEHNTDTIQKHHEKLRKDNAFIAIQTIL 340
           +T +D  L+        GS E + H     G+     +    H E +R  N+ IA++ + 
Sbjct: 204 STMDDWGLQIASMGGLCGSFESMEHHQRNVGIRGSEDNKRSGHREYIRNMNSLIAMEVLE 263

Query: 339 KLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEV-NLASSNTLYGSKLATPLNRCVQKL 163
            LT  ++  A +RL+ MNM  + + L +RL+ LE   L S N +   ++   L+  + K+
Sbjct: 264 NLTRSRKALALLRLIHMNMPDKFNELLQRLQFLETYKLPSPNLISAKEVLARLSSNIHKV 323

Query: 162 FSFQAE-PCHFYGVNALINGLSST----SAFGRSSQWLPFDLFMENKMDGRRLPAISA 4
            +F+++    F G+   I  + S     S    S+ W PFD+++E  MDGR LP  SA
Sbjct: 324 LAFESDLKRSFIGMFLNIRSIKSVPYSDSGSALSACWAPFDIYVETAMDGRLLPVTSA 381


>XP_010044343.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
           isoform X1 [Eucalyptus grandis]
          Length = 1360

 Score = 74.3 bits (181), Expect = 2e-12
 Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
 Frame = -2

Query: 507 ATAEDCSLEAQWTKNQAGSMEDVIHQ----GLVEHNTDTIQKHHEKLRKDNAFIAIQTIL 340
           +T +D  L+        GS E + H     G+     +    H E +R  N+ IA++ + 
Sbjct: 204 STMDDWGLQIASMGGLCGSFESMEHHQRNVGIRGSEDNKRSGHREYIRNMNSLIAMEVLE 263

Query: 339 KLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEV-NLASSNTLYGSKLATPLNRCVQKL 163
            LT  ++  A +RL+ MNM  + + L +RL+ LE   L S N +   ++   L+  + K+
Sbjct: 264 NLTRSRKALALLRLIHMNMPDKFNELLQRLQFLETYKLPSPNLISAKEVLARLSSNIHKV 323

Query: 162 FSFQAE-PCHFYGVNALINGLSST----SAFGRSSQWLPFDLFMENKMDGRRLPAISA 4
            +F+++    F G+   I  + S     S    S+ W PFD+++E  MDGR LP  SA
Sbjct: 324 LAFESDLKRSFIGMFLNIRSIKSVPYSDSGSALSACWAPFDIYVETAMDGRLLPVTSA 381


>XP_009337829.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like [Pyrus x bretschneideri]
          Length = 1321

 Score = 73.9 bits (180), Expect = 3e-12
 Identities = 46/141 (32%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
 Frame = -2

Query: 402 IQKHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLE-VNLA 226
           I++H E++RK N+F+AI+ + KLTE ++    +RLV +NM +  + L +RL+ LE   LA
Sbjct: 201 IKEHRERIRKMNSFLAIEVLAKLTESRKALVLLRLVHLNMPEIFNGLLKRLRFLEGRQLA 260

Query: 225 SSNTLYGSKLATPLNRCVQKLFSFQAEPCHFYGVNALINGLSS------TSAFGRSSQWL 64
           SS+     +    L+  +Q++  F+ +      +  L++  S          FG S+ W+
Sbjct: 261 SSDLSSAVEPLARLSANIQRVSGFKYQLNKHKLIGMLLDSGSQKPVFHCNPGFGHSTCWV 320

Query: 63  PFDLFMENKMDGRRLPAISAI 1
            FD++MEN MDG++L   S +
Sbjct: 321 CFDIYMENAMDGKQLSIKSVV 341


>XP_020108025.1 mediator of RNA polymerase II transcription subunit 33A-like
           isoform X1 [Ananas comosus]
          Length = 1304

 Score = 73.6 bits (179), Expect = 4e-12
 Identities = 44/145 (30%), Positives = 82/145 (56%), Gaps = 7/145 (4%)
 Frame = -2

Query: 414 NTDTIQKHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEV 235
           + D   +H E+LR+ N+ +A++ + K+   ++T   +RL+ +NM ++ + L +RL+ +E 
Sbjct: 209 SNDKRNEHREQLRRTNSLLALEVVEKMAANRKTHVFLRLIHLNMPEKFNGLLQRLRFIEA 268

Query: 234 NLASSNTLYGSK-LATPLNRCVQKLFSFQAEPCHFYGVNALING------LSSTSAFGRS 76
           + + S +L  +  +   L   VQ+  + + +      +  LI+       LS  S  G++
Sbjct: 269 HKSGSKSLVSANHIIDSLFANVQRAMNMEYQLNKRQLLGVLIDAAPGNSFLSHISGAGKA 328

Query: 75  SQWLPFDLFMENKMDGRRLPAISAI 1
           + W+  D+FMEN MDGR+L AISAI
Sbjct: 329 ACWICIDMFMENAMDGRQLHAISAI 353


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