BLASTX nr result
ID: Ephedra29_contig00018118
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00018118
(508 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010938078.1 PREDICTED: mediator of RNA polymerase II transcri... 84 1e-15
XP_018818169.1 PREDICTED: mediator of RNA polymerase II transcri... 82 3e-15
XP_018818097.1 PREDICTED: mediator of RNA polymerase II transcri... 82 3e-15
XP_018818023.1 PREDICTED: mediator of RNA polymerase II transcri... 82 3e-15
XP_010278916.1 PREDICTED: mediator of RNA polymerase II transcri... 82 6e-15
XP_018675347.1 PREDICTED: mediator of RNA polymerase II transcri... 80 3e-14
XP_009420227.2 PREDICTED: mediator of RNA polymerase II transcri... 80 3e-14
XP_007206343.1 hypothetical protein PRUPE_ppa017529mg [Prunus pe... 78 1e-13
ONI04055.1 hypothetical protein PRUPE_6G299600 [Prunus persica] ... 78 1e-13
XP_017187171.1 PREDICTED: mediator of RNA polymerase II transcri... 77 2e-13
XP_010921239.1 PREDICTED: mediator of RNA polymerase II transcri... 77 2e-13
XP_010921237.1 PREDICTED: mediator of RNA polymerase II transcri... 77 3e-13
XP_006842623.1 PREDICTED: mediator of RNA polymerase II transcri... 77 3e-13
XP_008782719.1 PREDICTED: mediator of RNA polymerase II transcri... 76 5e-13
XP_008244324.1 PREDICTED: mediator of RNA polymerase II transcri... 76 6e-13
KCW88467.1 hypothetical protein EUGRSUZ_A00855 [Eucalyptus grandis] 74 2e-12
XP_010044349.1 PREDICTED: mediator of RNA polymerase II transcri... 74 2e-12
XP_010044343.1 PREDICTED: mediator of RNA polymerase II transcri... 74 2e-12
XP_009337829.1 PREDICTED: mediator of RNA polymerase II transcri... 74 3e-12
XP_020108025.1 mediator of RNA polymerase II transcription subun... 74 4e-12
>XP_010938078.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Elaeis guineensis]
Length = 1330
Score = 84.0 bits (206), Expect = 1e-15
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 12/179 (6%)
Frame = -2
Query: 504 TAEDCSLE-----AQWTKNQAGSMEDVIHQGLVEHNTDTIQKHHEKLRKDNAFIAIQTIL 340
T EDC L+ + N+ + D+ +G + N + KH E+LR+ N +A++ +
Sbjct: 176 TLEDCGLQLTFRHGDFYANEGHQVMDIDIKGSSDENRN---KHREQLRRTNVLLAMEVVE 232
Query: 339 KLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVNLASSNTLYGSK-LATPLNRCVQKL 163
K+T KR +RL+ +NM ++ + L ERL+ +E + ++S L + + L+ VQK
Sbjct: 233 KITSNKRAKFFLRLIYLNMPEKFNGLLERLQFIESHKSASQALLSANHILDSLSTNVQKA 292
Query: 162 FSFQAEPCHFYGVNALIN-GLSS-----TSAFGRSSQWLPFDLFMENKMDGRRLPAISA 4
++ + + +++ G SS +S GR++ W+ FDLFMEN MDGR+L +SA
Sbjct: 293 MDWECQINKHQLLGVMVDAGPSSYLSCHSSGTGRAACWISFDLFMENAMDGRQLHTVSA 351
>XP_018818169.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X3 [Juglans regia]
Length = 1274
Score = 82.4 bits (202), Expect = 3e-15
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 7/139 (5%)
Frame = -2
Query: 396 KHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVN-LASS 220
+HHEK+R N+F AI+ + KLTE ++ +RLV +NM L +RL+ LE + L S
Sbjct: 211 EHHEKMRTTNSFTAIEVLGKLTESRKAMVILRLVHLNMPVNFSGLLQRLQFLEASELVSP 270
Query: 219 NTLYGSKLATPLNRCVQKLFSFQAEPCHFYGVNALINGLSST------SAFGRSSQWLPF 58
+ ++L L+ +Q++ F+ + +L++ S S FG+S+ W PF
Sbjct: 271 HLNSANQLLAKLSANIQRVMGFEYQLNRSQLSGSLLDIASCKPVSCFHSQFGQSACWAPF 330
Query: 57 DLFMENKMDGRRLPAISAI 1
D++MEN MDG++LP SA+
Sbjct: 331 DIYMENAMDGKQLPIKSAV 349
>XP_018818097.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Juglans regia]
Length = 1308
Score = 82.4 bits (202), Expect = 3e-15
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 7/139 (5%)
Frame = -2
Query: 396 KHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVN-LASS 220
+HHEK+R N+F AI+ + KLTE ++ +RLV +NM L +RL+ LE + L S
Sbjct: 211 EHHEKMRTTNSFTAIEVLGKLTESRKAMVILRLVHLNMPVNFSGLLQRLQFLEASELVSP 270
Query: 219 NTLYGSKLATPLNRCVQKLFSFQAEPCHFYGVNALINGLSST------SAFGRSSQWLPF 58
+ ++L L+ +Q++ F+ + +L++ S S FG+S+ W PF
Sbjct: 271 HLNSANQLLAKLSANIQRVMGFEYQLNRSQLSGSLLDIASCKPVSCFHSQFGQSACWAPF 330
Query: 57 DLFMENKMDGRRLPAISAI 1
D++MEN MDG++LP SA+
Sbjct: 331 DIYMENAMDGKQLPIKSAV 349
>XP_018818023.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Juglans regia]
Length = 1328
Score = 82.4 bits (202), Expect = 3e-15
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 7/139 (5%)
Frame = -2
Query: 396 KHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVN-LASS 220
+HHEK+R N+F AI+ + KLTE ++ +RLV +NM L +RL+ LE + L S
Sbjct: 211 EHHEKMRTTNSFTAIEVLGKLTESRKAMVILRLVHLNMPVNFSGLLQRLQFLEASELVSP 270
Query: 219 NTLYGSKLATPLNRCVQKLFSFQAEPCHFYGVNALINGLSST------SAFGRSSQWLPF 58
+ ++L L+ +Q++ F+ + +L++ S S FG+S+ W PF
Sbjct: 271 HLNSANQLLAKLSANIQRVMGFEYQLNRSQLSGSLLDIASCKPVSCFHSQFGQSACWAPF 330
Query: 57 DLFMENKMDGRRLPAISAI 1
D++MEN MDG++LP SA+
Sbjct: 331 DIYMENAMDGKQLPIKSAV 349
>XP_010278916.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Nelumbo nucifera]
Length = 1322
Score = 81.6 bits (200), Expect = 6e-15
Identities = 48/146 (32%), Positives = 86/146 (58%), Gaps = 7/146 (4%)
Frame = -2
Query: 417 HNTDTIQKHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLE 238
+ D ++H E L+K NAF+ ++ + KLTE ++ +RLV +NM ++ + L +R++ LE
Sbjct: 202 NQNDKRREHCELLKKTNAFMTMEVLGKLTENRKVMVLLRLVHLNMAEKFNGLLQRIQFLE 261
Query: 237 VNLA-SSNTLYGSKLATPLNRCVQK--LFSFQAEPCHFYGVNALINGLSSTSAF----GR 79
+ + S N S++ L+ +++ +Q +GV I SS S++ GR
Sbjct: 262 SHKSVSPNIKSSSQILVRLSANIKRGLDLEYQLNKRQLFGVMIDIGSCSSASSYNFGAGR 321
Query: 78 SSQWLPFDLFMENKMDGRRLPAISAI 1
++ W+PFD+++E MDGR+LPA SA+
Sbjct: 322 AACWVPFDIYVETAMDGRQLPATSAV 347
>XP_018675347.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Musa acuminata subsp. malaccensis]
Length = 1067
Score = 79.7 bits (195), Expect = 3e-14
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 24/192 (12%)
Frame = -2
Query: 504 TAEDCSLEAQWTKNQ----AGSMEDVIHQGLVEHNTDTIQKHHEKLRKDNAFIAIQTILK 337
T EDC + A E + + E++ + +HH+KLRK NA +AI+ K
Sbjct: 212 TIEDCGPQLVSADKHGCAYASGGEQTMQVDVKENSNERRNEHHDKLRKTNALMAIEVAEK 271
Query: 336 LTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVNLASSNTLYG-----SKLATPLNRCV 172
++ K+ A + L+ +NM + + L +RL+ ++ N + S +L KL T +N V
Sbjct: 272 VSSNKKAKAFLHLIRINMPELFNGLLQRLQTIDANRSKSESLLSVSHILDKLFTNINSAV 331
Query: 171 QKLF---------------SFQAEPCHFYGVNALINGLSSTSAFGRSSQWLPFDLFMENK 37
F S+ PC+ +G GR + W+P D+FMEN
Sbjct: 332 NGEFLLNKHQLLGALADAGSYSLNPCNSHGA-------------GRGACWIPVDIFMENA 378
Query: 36 MDGRRLPAISAI 1
MDG+ L AISA+
Sbjct: 379 MDGKHLYAISAV 390
>XP_009420227.2 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Musa acuminata subsp. malaccensis]
Length = 1362
Score = 79.7 bits (195), Expect = 3e-14
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 24/192 (12%)
Frame = -2
Query: 504 TAEDCSLEAQWTKNQ----AGSMEDVIHQGLVEHNTDTIQKHHEKLRKDNAFIAIQTILK 337
T EDC + A E + + E++ + +HH+KLRK NA +AI+ K
Sbjct: 212 TIEDCGPQLVSADKHGCAYASGGEQTMQVDVKENSNERRNEHHDKLRKTNALMAIEVAEK 271
Query: 336 LTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVNLASSNTLYG-----SKLATPLNRCV 172
++ K+ A + L+ +NM + + L +RL+ ++ N + S +L KL T +N V
Sbjct: 272 VSSNKKAKAFLHLIRINMPELFNGLLQRLQTIDANRSKSESLLSVSHILDKLFTNINSAV 331
Query: 171 QKLF---------------SFQAEPCHFYGVNALINGLSSTSAFGRSSQWLPFDLFMENK 37
F S+ PC+ +G GR + W+P D+FMEN
Sbjct: 332 NGEFLLNKHQLLGALADAGSYSLNPCNSHGA-------------GRGACWIPVDIFMENA 378
Query: 36 MDGRRLPAISAI 1
MDG+ L AISA+
Sbjct: 379 MDGKHLYAISAV 390
>XP_007206343.1 hypothetical protein PRUPE_ppa017529mg [Prunus persica]
Length = 1316
Score = 77.8 bits (190), Expect = 1e-13
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Frame = -2
Query: 402 IQKHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLE-VNLA 226
I++HHE++RK N+ +AI+ + KLTE +++ +RLV +NM ++ + L +RL+ L+ LA
Sbjct: 197 IKEHHERIRKRNSLLAIEVLAKLTESRKSLVLLRLVHLNMPERFNGLLQRLRFLKGRQLA 256
Query: 225 SSNTLYGSKLATPLNRCVQKL--FSFQAEPCHFYGVNALING----LSSTSAFGRSSQWL 64
SS+ +L L+ + + F Q +GV I S FG S+ W+
Sbjct: 257 SSDLNSALQLLARLSANIHSVVGFKHQLNKHRLFGVLLDIGSRKPVFHCNSGFGHSTCWV 316
Query: 63 PFDLFMENKMDGRRLPAISAI 1
FD++MEN MDG++L S I
Sbjct: 317 RFDIYMENAMDGKQLSIKSFI 337
>ONI04055.1 hypothetical protein PRUPE_6G299600 [Prunus persica] ONI04056.1
hypothetical protein PRUPE_6G299600 [Prunus persica]
Length = 1323
Score = 77.8 bits (190), Expect = 1e-13
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Frame = -2
Query: 402 IQKHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLE-VNLA 226
I++HHE++RK N+ +AI+ + KLTE +++ +RLV +NM ++ + L +RL+ L+ LA
Sbjct: 204 IKEHHERIRKRNSLLAIEVLAKLTESRKSLVLLRLVHLNMPERFNGLLQRLRFLKGRQLA 263
Query: 225 SSNTLYGSKLATPLNRCVQKL--FSFQAEPCHFYGVNALING----LSSTSAFGRSSQWL 64
SS+ +L L+ + + F Q +GV I S FG S+ W+
Sbjct: 264 SSDLNSALQLLARLSANIHSVVGFKHQLNKHRLFGVLLDIGSRKPVFHCNSGFGHSTCWV 323
Query: 63 PFDLFMENKMDGRRLPAISAI 1
FD++MEN MDG++L S I
Sbjct: 324 RFDIYMENAMDGKQLSIKSFI 344
>XP_017187171.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Malus domestica]
Length = 365
Score = 76.6 bits (187), Expect = 2e-13
Identities = 51/144 (35%), Positives = 82/144 (56%), Gaps = 10/144 (6%)
Frame = -2
Query: 402 IQKHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVNLAS 223
+++H E++RK N+F+AI+ + KLT ++ +RLV +NM + + L +RL+ LE + +
Sbjct: 201 VKEHRERIRKMNSFLAIEVLAKLTASRKALVLLRLVHLNMPEIFNGLLQRLRFLEGHHRA 260
Query: 222 SNTLYGSKLATPLNRC---VQKL--FSFQAEPCHFYGVNALING-----LSSTSAFGRSS 73
S+ L + PL R +Q++ F +Q F GV L NG S FG S+
Sbjct: 261 SSDLRSA--VEPLARLSANIQRVSGFKYQLNKHQFVGV-LLDNGSQKPVFHCNSGFGHST 317
Query: 72 QWLPFDLFMENKMDGRRLPAISAI 1
W+ FD++MEN MDG++L S I
Sbjct: 318 CWVRFDIYMENAMDGKQLSIKSVI 341
>XP_010921239.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Elaeis guineensis]
Length = 1331
Score = 77.0 bits (188), Expect = 2e-13
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 15/183 (8%)
Frame = -2
Query: 504 TAEDCSLEAQWTKN----QAGSMEDVIHQGLVEHNTDTIQKHHEKLRKDNAFIAIQTILK 337
T EDC + + A V+ + E + + +H E+LR NA +AI+ + K
Sbjct: 176 TLEDCGFQLPFRDKYGNFNAKEGHQVMEIDVKESSDERWNRHREQLRGTNALLAIEVVGK 235
Query: 336 LTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVNLASSNTLYGS-----KLATPLNRCV 172
+T K+ IRL +NM ++ + L ERL+ +E + ++S L + L+ + R V
Sbjct: 236 ITSNKKARVFIRLFYLNMPEKFNDLLERLQFIESHKSASQALLSANHILDSLSANMRRAV 295
Query: 171 QKLFSFQAEPCHFYGVNALINGLSS------TSAFGRSSQWLPFDLFMENKMDGRRLPAI 10
+ ++ H GV L++ S +S G ++ W+ FD+FMEN MDG++L AI
Sbjct: 296 D--WEYKLNKQHHLGV--LVDDRPSSLLSCHSSGAGTAACWITFDMFMENAMDGKQLHAI 351
Query: 9 SAI 1
SAI
Sbjct: 352 SAI 354
>XP_010921237.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Elaeis guineensis]
Length = 1352
Score = 77.0 bits (188), Expect = 3e-13
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 15/183 (8%)
Frame = -2
Query: 504 TAEDCSLEAQWTKN----QAGSMEDVIHQGLVEHNTDTIQKHHEKLRKDNAFIAIQTILK 337
T EDC + + A V+ + E + + +H E+LR NA +AI+ + K
Sbjct: 176 TLEDCGFQLPFRDKYGNFNAKEGHQVMEIDVKESSDERWNRHREQLRGTNALLAIEVVGK 235
Query: 336 LTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVNLASSNTLYGS-----KLATPLNRCV 172
+T K+ IRL +NM ++ + L ERL+ +E + ++S L + L+ + R V
Sbjct: 236 ITSNKKARVFIRLFYLNMPEKFNDLLERLQFIESHKSASQALLSANHILDSLSANMRRAV 295
Query: 171 QKLFSFQAEPCHFYGVNALINGLSS------TSAFGRSSQWLPFDLFMENKMDGRRLPAI 10
+ ++ H GV L++ S +S G ++ W+ FD+FMEN MDG++L AI
Sbjct: 296 D--WEYKLNKQHHLGV--LVDDRPSSLLSCHSSGAGTAACWITFDMFMENAMDGKQLHAI 351
Query: 9 SAI 1
SAI
Sbjct: 352 SAI 354
>XP_006842623.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
[Amborella trichopoda] ERN04298.1 hypothetical protein
AMTR_s00077p00181380 [Amborella trichopoda]
Length = 1314
Score = 76.6 bits (187), Expect = 3e-13
Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 19/188 (10%)
Frame = -2
Query: 507 ATAEDCSLE---AQWTKNQ---------AGSMEDVIHQGLVEHNTDTIQKHHEKLRKDNA 364
+T DC+LE Q T + AG M+ + + + D + +H + LR N+
Sbjct: 156 STLVDCTLEDWGLQGTAREKNGLYGTAGAGDMDIDVKGNIKGNKNDRLLEHRDHLRSMNS 215
Query: 363 FIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVNLAS-SNTLYGSKLATP 187
+ AI+ + KL E K++ +RLV N+ ++ L +RL+ LE + + N G+ L
Sbjct: 216 YAAIEVVGKLFESKKSSVLLRLVHHNLPEKYRGLLQRLQYLEAHKSKLPNMKVGTPLIGK 275
Query: 186 LNRCVQKLFSFQAEPCHFYGVNALINGLSSTSA----FG--RSSQWLPFDLFMENKMDGR 25
L+ +Q++ + + + A+I+ S S FG S+ W+ FDL+MEN MDG+
Sbjct: 276 LSGALQRVLERENQLNKCQVIRAMIDIGCSNSVLRHNFGVAHSASWISFDLYMENVMDGK 335
Query: 24 RLPAISAI 1
+LPA SAI
Sbjct: 336 QLPATSAI 343
>XP_008782719.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Phoenix dactylifera]
Length = 1331
Score = 76.3 bits (186), Expect = 5e-13
Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 11/179 (6%)
Frame = -2
Query: 504 TAEDCSLEAQWTKNQAGSMEDVIHQ----GLVEHNTDTIQKHHEKLRKDNAFIAIQTILK 337
T EDC + + + HQ + E + + +H E+LR NA +AI+ + K
Sbjct: 176 TLEDCGFQLPFRDKHGNFYANEGHQVMEIDVKESSDERRNRHREQLRGTNALLAIEVVGK 235
Query: 336 LTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEVNLASSNTLYGSK-LATPLNRCVQKLF 160
+T K+ +RL +NM ++ + L ERL+ +E + ++S L + + L+ +QK
Sbjct: 236 ITSNKKAKVFLRLFYLNMPEKFNDLLERLQFIESHKSASQALLSANHILDSLSANIQKAM 295
Query: 159 SFQAEPCHFYGVNALI----NGLSSTSAFG--RSSQWLPFDLFMENKMDGRRLPAISAI 1
++ + + L + L S FG R + W+ FD+FMEN MDG++L ISAI
Sbjct: 296 DWEYKLNRHQHLGVLFDDGPSSLLSCHIFGASRDACWITFDMFMENAMDGKQLHPISAI 354
>XP_008244324.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Prunus mume]
Length = 1323
Score = 75.9 bits (185), Expect = 6e-13
Identities = 47/141 (33%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
Frame = -2
Query: 402 IQKHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLE-VNLA 226
+++HHE++RK N+ +AI+ + KLTE +++ +RLV +NM ++ + L +RL+ L+ A
Sbjct: 204 VKEHHERIRKRNSLLAIEVLAKLTESRKSLVLLRLVHLNMPERFNGLLQRLRFLKGRQFA 263
Query: 225 SSNTLYGSKLATPLNRCVQKL--FSFQAEPCHFYGVNALING----LSSTSAFGRSSQWL 64
SS+ +L L+ + + F +Q GV I S FG S+ W+
Sbjct: 264 SSDLNSALQLLARLSANIHSVLGFKYQLNKHRLVGVLLDIGSRKPVFHCNSGFGHSTCWV 323
Query: 63 PFDLFMENKMDGRRLPAISAI 1
FD++MEN MDG++L S I
Sbjct: 324 RFDIYMENAMDGKQLSIKSFI 344
>KCW88467.1 hypothetical protein EUGRSUZ_A00855 [Eucalyptus grandis]
Length = 1318
Score = 74.3 bits (181), Expect = 2e-12
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
Frame = -2
Query: 507 ATAEDCSLEAQWTKNQAGSMEDVIHQ----GLVEHNTDTIQKHHEKLRKDNAFIAIQTIL 340
+T +D L+ GS E + H G+ + H E +R N+ IA++ +
Sbjct: 162 STMDDWGLQIASMGGLCGSFESMEHHQRNVGIRGSEDNKRSGHREYIRNMNSLIAMEVLE 221
Query: 339 KLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEV-NLASSNTLYGSKLATPLNRCVQKL 163
LT ++ A +RL+ MNM + + L +RL+ LE L S N + ++ L+ + K+
Sbjct: 222 NLTRSRKALALLRLIHMNMPDKFNELLQRLQFLETYKLPSPNLISAKEVLARLSSNIHKV 281
Query: 162 FSFQAE-PCHFYGVNALINGLSST----SAFGRSSQWLPFDLFMENKMDGRRLPAISA 4
+F+++ F G+ I + S S S+ W PFD+++E MDGR LP SA
Sbjct: 282 LAFESDLKRSFIGMFLNIRSIKSVPYSDSGSALSACWAPFDIYVETAMDGRLLPVTSA 339
>XP_010044349.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X2 [Eucalyptus grandis]
Length = 1359
Score = 74.3 bits (181), Expect = 2e-12
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
Frame = -2
Query: 507 ATAEDCSLEAQWTKNQAGSMEDVIHQ----GLVEHNTDTIQKHHEKLRKDNAFIAIQTIL 340
+T +D L+ GS E + H G+ + H E +R N+ IA++ +
Sbjct: 204 STMDDWGLQIASMGGLCGSFESMEHHQRNVGIRGSEDNKRSGHREYIRNMNSLIAMEVLE 263
Query: 339 KLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEV-NLASSNTLYGSKLATPLNRCVQKL 163
LT ++ A +RL+ MNM + + L +RL+ LE L S N + ++ L+ + K+
Sbjct: 264 NLTRSRKALALLRLIHMNMPDKFNELLQRLQFLETYKLPSPNLISAKEVLARLSSNIHKV 323
Query: 162 FSFQAE-PCHFYGVNALINGLSST----SAFGRSSQWLPFDLFMENKMDGRRLPAISA 4
+F+++ F G+ I + S S S+ W PFD+++E MDGR LP SA
Sbjct: 324 LAFESDLKRSFIGMFLNIRSIKSVPYSDSGSALSACWAPFDIYVETAMDGRLLPVTSA 381
>XP_010044343.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33A
isoform X1 [Eucalyptus grandis]
Length = 1360
Score = 74.3 bits (181), Expect = 2e-12
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
Frame = -2
Query: 507 ATAEDCSLEAQWTKNQAGSMEDVIHQ----GLVEHNTDTIQKHHEKLRKDNAFIAIQTIL 340
+T +D L+ GS E + H G+ + H E +R N+ IA++ +
Sbjct: 204 STMDDWGLQIASMGGLCGSFESMEHHQRNVGIRGSEDNKRSGHREYIRNMNSLIAMEVLE 263
Query: 339 KLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEV-NLASSNTLYGSKLATPLNRCVQKL 163
LT ++ A +RL+ MNM + + L +RL+ LE L S N + ++ L+ + K+
Sbjct: 264 NLTRSRKALALLRLIHMNMPDKFNELLQRLQFLETYKLPSPNLISAKEVLARLSSNIHKV 323
Query: 162 FSFQAE-PCHFYGVNALINGLSST----SAFGRSSQWLPFDLFMENKMDGRRLPAISA 4
+F+++ F G+ I + S S S+ W PFD+++E MDGR LP SA
Sbjct: 324 LAFESDLKRSFIGMFLNIRSIKSVPYSDSGSALSACWAPFDIYVETAMDGRLLPVTSA 381
>XP_009337829.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Pyrus x bretschneideri]
Length = 1321
Score = 73.9 bits (180), Expect = 3e-12
Identities = 46/141 (32%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Frame = -2
Query: 402 IQKHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLE-VNLA 226
I++H E++RK N+F+AI+ + KLTE ++ +RLV +NM + + L +RL+ LE LA
Sbjct: 201 IKEHRERIRKMNSFLAIEVLAKLTESRKALVLLRLVHLNMPEIFNGLLKRLRFLEGRQLA 260
Query: 225 SSNTLYGSKLATPLNRCVQKLFSFQAEPCHFYGVNALINGLSS------TSAFGRSSQWL 64
SS+ + L+ +Q++ F+ + + L++ S FG S+ W+
Sbjct: 261 SSDLSSAVEPLARLSANIQRVSGFKYQLNKHKLIGMLLDSGSQKPVFHCNPGFGHSTCWV 320
Query: 63 PFDLFMENKMDGRRLPAISAI 1
FD++MEN MDG++L S +
Sbjct: 321 CFDIYMENAMDGKQLSIKSVV 341
>XP_020108025.1 mediator of RNA polymerase II transcription subunit 33A-like
isoform X1 [Ananas comosus]
Length = 1304
Score = 73.6 bits (179), Expect = 4e-12
Identities = 44/145 (30%), Positives = 82/145 (56%), Gaps = 7/145 (4%)
Frame = -2
Query: 414 NTDTIQKHHEKLRKDNAFIAIQTILKLTEQKRTFAAIRLVCMNMFKQRHLLCERLKLLEV 235
+ D +H E+LR+ N+ +A++ + K+ ++T +RL+ +NM ++ + L +RL+ +E
Sbjct: 209 SNDKRNEHREQLRRTNSLLALEVVEKMAANRKTHVFLRLIHLNMPEKFNGLLQRLRFIEA 268
Query: 234 NLASSNTLYGSK-LATPLNRCVQKLFSFQAEPCHFYGVNALING------LSSTSAFGRS 76
+ + S +L + + L VQ+ + + + + LI+ LS S G++
Sbjct: 269 HKSGSKSLVSANHIIDSLFANVQRAMNMEYQLNKRQLLGVLIDAAPGNSFLSHISGAGKA 328
Query: 75 SQWLPFDLFMENKMDGRRLPAISAI 1
+ W+ D+FMEN MDGR+L AISAI
Sbjct: 329 ACWICIDMFMENAMDGRQLHAISAI 353